Citrus Sinensis ID: 019060

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHcccccEEEEEccccccccccccEEEEcccccccHHHHccccHHHHHcHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHcccccEEEcccccccccEEHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHHcccccEEEccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccccccccccccccccHccccEEEEEccccHHHHHHHHHHHHcccccEEEEEcccEHHHHHHHHHHccccEEEEEcccccccEEcccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEHHHHHHHHHcccccEEEccccccccHEEHHHHHHHHHHHHHcccccEEEcccccHHHHHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHcHccc
Coil and Loop (DISEMBL)
maqeisngnhnsaskppptpsplrfskFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDnyftgskdnlrkwighprfelirhdvtepllieVDQIyhlacpaspifykynpvktiKTNVIGTLNMLGLAKRVGARILLTstsevygdplvhpqdesywgnvnpigvrscYDEGKRVAETLMFDYHRQHGIEIRIARIFntygprmniddgrVVSNFIAQairgepltvqapgtqtrsfcYVSDMVDGLIRLmegentgpinignpgeFTMLELAENVKELinpnveitmventpddprqrkpditkatellgwepkiklrdglplmeddfrlrlavprkn
Flexible Loop (DISEMBL)
maqeisngnhnsaskppptpSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDnyftgskdnlrkWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSevygdplvhpqdesywgnvNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIrgepltvqapgtqtrsFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEItmventpddprqrkpditkatellgwepkiklrdglplmeddfrlrlavprkn
Low Complexity Region (SEG)
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN
Disordered region (IsUnstruct)
************************FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM******************TELLGWEPKIKLRDGLPLMEDDFRL********
Disordered Region (DISOPRED)
*******************************NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRL*LAV****
Disordered Region (DISEMBL)
*******************PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN
Disordered Region (DISPRO)
*******************PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
Q91XL3	420	UDP-glucuronic acid decar	yes	no	0.901	0.742	0.635	1e-116
Q8NBZ7	420	UDP-glucuronic acid decar	yes	no	0.901	0.742	0.635	1e-116
Q5R885	420	UDP-glucuronic acid decar	yes	no	0.901	0.742	0.635	1e-116
Q5PQX0	420	UDP-glucuronic acid decar	yes	no	0.901	0.742	0.635	1e-116
Q6DF08	421	UDP-glucuronic acid decar	yes	no	0.959	0.788	0.590	1e-114
Q6GMI9	418	UDP-glucuronic acid decar	yes	no	0.852	0.705	0.648	1e-113
Q57664	305	Putative UDP-glucose 4-ep	yes	no	0.800	0.908	0.346	9e-32
Q9ZAE8	320	dTDP-glucose 4,6-dehydrat	yes	no	0.835	0.903	0.309	1e-28
Q6D2F1	673	Bifunctional polymyxin re	yes	no	0.904	0.465	0.286	4e-28
C6DAW5	672	Bifunctional polymyxin re	yes	no	0.904	0.465	0.285	1e-27

>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1

 Score =  419 bits (1076), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
            T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP + L +GL    
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388

Query: 334 DDFRLRLAVPRKN 346
             FR  L     N
Sbjct: 389 HYFRKELEYQANN 401

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.
Mus musculus (taxid: 10090)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 5

>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1

 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
            T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP + L +GL    
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388

Query: 334 DDFRLRLAVPRKN 346
             FR  L     N
Sbjct: 389 HYFRKELEYQANN 401

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1

 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
            T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP + L +GL    
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388

Query: 334 DDFRLRLAVPRKN 346
             FR  L     N
Sbjct: 389 HYFRKELEYQANN 401

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Pongo abelii (taxid: 9601)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1

 Score =  418 bits (1075), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 199/313 (63%), Positives = 240/313 (76%), Gaps = 1/313 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 90  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 148

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 149 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 208

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 209 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 268

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 269 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 328

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
            T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP + L +GL    
Sbjct: 329 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 388

Query: 334 DDFRLRLAVPRKN 346
             FR  L     N
Sbjct: 389 HYFRKELEYQANN 401

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1

 Score =  413 bits (1061), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/342 (59%), Positives = 250/342 (73%), Gaps = 10/342 (2%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFF--QSNMRILVTGGAGFIGSHLVDKLMENEKN 58
           + ++I N   +   K PP        KF   +   RIL+TGGAGF+GSHL DKLM  + +
Sbjct: 63  LREKIQNLERSFTQKYPPV-------KFLSEKDRKRILITGGAGFVGSHLTDKLMM-DGH 114

Query: 59  EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
           EV VVDN+FTG K N+  WIGH  FELI HDV EPL IEVDQIYHLA PASP  Y YNP+
Sbjct: 115 EVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPI 174

Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
           KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDE
Sbjct: 175 KTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDE 234

Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
           GKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GE LTV   G
Sbjct: 235 GKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSG 294

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
            QTR+F YVSD+V+GL+ LM    + P+N+GNP E ++++ A  +K+L+    EI+ +  
Sbjct: 295 EQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSE 354

Query: 299 TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRL 340
             DDP++RKPDI KA  LLGWEP + L +GL      FR  L
Sbjct: 355 AQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.

Xenopus tropicalis (taxid: 8364)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2

 Score =  409 bits (1051), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/296 (64%), Positives = 234/296 (79%), Gaps = 1/296 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 88  RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 146

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 147 LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 206

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM++
Sbjct: 207 PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHM 266

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GE LTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 267 NDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEE 326

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
            T+LE A+ +K L+     I  +    DDP++R+PDI KA  LLGWEP + L +GL
Sbjct: 327 HTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGL 382

Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis (By similarity). Essential during embryogenesis for craniofacial development.

Danio rerio (taxid: 7955)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 5

>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1

 Score =  137 bits (346), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 32/309 (10%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAGFIGSH+VDKL+EN   +VI++DN  TG+K+N+     +P+ E +  D+ +  
Sbjct: 2   ILVTGGAGFIGSHIVDKLIENNY-DVIILDNLTTGNKNNI-----NPKAEFVNADIRDKD 55

Query: 95  LIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTS 146
           L E      V+ + H A   +      NPV     NV+GT+N+L + ++  +   +  +S
Sbjct: 56  LDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASS 115

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
              VYG+P   P DE++     PI   S Y   K V E  +  Y+R +GIE  I R  N 
Sbjct: 116 GGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170

Query: 207 YGPRMN-IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
           YG R +   +  V+S FI + ++ +   +   G QTR F YV D+    +  +  +N   
Sbjct: 171 YGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYVGDVAKANLMALNWKNE-I 229

Query: 266 INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP-----DITKATELLGWE 320
           +NIG   E ++ EL + +K  I    E        D PR+ +      DI KA E LGW+
Sbjct: 230 VNIGTGKETSVNELFDIIKHEIGFRGEAIY-----DKPREGEVYRIYLDIKKA-ESLGWK 283

Query: 321 PKIKLRDGL 329
           P+I L++G+
Sbjct: 284 PEIDLKEGI 292

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)

EC: 5

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 2

>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 145/313 (46%), Gaps = 24/313 (7%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENE------KNEVIVVDNY-FTGSKDNLRKWIGHPRFEL 85
           M+ILVTGGAGFIGSH V  L+  +        +V VVD   + G+  NL +    PRF  
Sbjct: 1   MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSF 60

Query: 86  IRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--V 138
           +R D+ +  LIE      D + H A               + +N++GT  +L  A R  +
Sbjct: 61  VRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120

Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           G R L  ST EVYG       D   W   +P+   S Y   K  ++ L   YH+ HG+++
Sbjct: 121 G-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDV 174

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            + R  N YGPR   +  +++  F+ + + G  + V   G   R + +VSD   GL   +
Sbjct: 175 VVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL 232

Query: 259 EGENTGPI-NIGNPGEFTMLELAENVKELIN-PNVEITMVENTPDDPRQRKPDITKATEL 316
                G + +IG   E T LEL E + E    P   I+ V +     R+   D +K    
Sbjct: 233 GAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDRRYSLDYSKIAGE 292

Query: 317 LGWEPKIKLRDGL 329
           LG+ P++   DG+
Sbjct: 293 LGYRPRVDFTDGI 305

Probably involved in the biosynthesis of the acarviose moiety of the alpha-glucosidase inhibitor acarbose. Catalyzes the dehydration of dTDP-D-glucose to form dTDP-6-deoxy-D-xylo-4-hexulose via a three-step process involving oxidation, dehydration and reduction.

Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) (taxid: 134676)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 4

EC: 6

>sp|Q6D2F1|ARNA_ERWCT Bifunctional polymyxin resistance protein ArnA OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=arnA PE=3 SV=1

 Score =  125 bits (315), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 40/353 (11%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           S+  +   R+L+ G  GFIG+HL ++L+ +++ E+  +D     S D + +++G PRF  
Sbjct: 316 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 371

Query: 86  IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           +  D++      E  + + D I  L   A+PI Y  NP++  + +    L ++    R  
Sbjct: 372 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 431

Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
            RI+  STSEVYG  D     +D S    V PI   R  Y   K++ + +++ Y  ++G+
Sbjct: 432 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 490

Query: 197 EIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
              + R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D 
Sbjct: 491 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 550

Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLELAENVKELIN---------PNVEITMV 296
           ++ L R++E  N       INIGNP  E ++ EL E +    N         P      V
Sbjct: 551 IEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFIDV 610

Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVP 343
           E++        D   R P I  A  LL WEP +K+   +    D F   + VP
Sbjct: 611 ESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRTVDVP 663

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) (taxid: 218491)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 5

>sp|C6DAW5|ARNA_PECCP Bifunctional polymyxin resistance protein ArnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 41/354 (11%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           S+  +   R+L+ G  GFIG+HL ++L+ +++ E+  +D     S D + +++G PRF  
Sbjct: 315 SRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHF 370

Query: 86  IRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           +  D++      E  + + D I  L   A+PI Y  NP++  + +    L ++    R  
Sbjct: 371 VEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYN 430

Query: 140 ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGI 196
            RI+  STSEVYG  D     +D S    V PI   R  Y   K++ + +++ Y  ++G+
Sbjct: 431 KRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGL 489

Query: 197 EIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM 250
              + R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D 
Sbjct: 490 RFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDG 549

Query: 251 VDGLIRLMEGENTGP----INIGNP-GEFTMLEL---------AENVKELINPNVEITMV 296
           ++ L R++E  N       INIGNP  E ++ EL         A  +++   P      V
Sbjct: 550 IEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIEV 609

Query: 297 ENTP------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
           E++        D   R P I  A  LL WEP +K+   +    D F LR   P+
Sbjct: 610 ESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYF-LRTVDPQ 662

Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto-arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido-arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Pectobacterium carotovorum subsp. carotovorum (strain PC1) (taxid: 561230)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
255575062	346	dtdp-glucose 4-6-dehydratase, putative [	0.997	0.997	0.959	0.0
224100953	346	predicted protein [Populus trichocarpa]	1.0	1.0	0.942	0.0
224109544	346	predicted protein [Populus trichocarpa]	1.0	1.0	0.933	0.0
192338748	346	UDP-D-glucuronate carboxy-lyase [Eucalyp	1.0	1.0	0.927	0.0
225449563	345	PREDICTED: UDP-glucuronic acid decarboxy	0.994	0.997	0.933	0.0
449459910	344	PREDICTED: UDP-glucuronic acid decarboxy	0.994	1.0	0.915	0.0
357454141	351	UDP-glucuronic acid decarboxylase [Medic	0.982	0.968	0.923	0.0
388495536	346	unknown [Lotus japonicus]	1.0	1.0	0.904	0.0
358248590	348	uncharacterized protein LOC100790835 [Gl	1.0	0.994	0.910	0.0
413968384	342	UDP-glucuronic acid decarboxylase 1-like	0.988	1.0	0.923	0.0

>gi|255575062|ref|XP_002528436.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gi|223532112|gb|EEF33919.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/345 (95%), Positives = 339/345 (98%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E+SNG+H+SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV
Sbjct: 1   MAKEVSNGDHSSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IVVDNYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVVDNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQEESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+R EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAE VKELINP+VEI  VENTP
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAETVKELINPDVEIAKVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
           DDPRQRKPDITKA ELLGWEPKIKLRDGLPLMEDDFRLRL VPRK
Sbjct: 301 DDPRQRKPDITKAKELLGWEPKIKLRDGLPLMEDDFRLRLGVPRK 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100953|ref|XP_002312082.1| predicted protein [Populus trichocarpa] gi|118487220|gb|ABK95438.1| unknown [Populus trichocarpa] gi|222851902|gb|EEE89449.1| predicted protein [Populus trichocarpa]

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/346 (94%), Positives = 335/346 (96%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E SNGNHNSA+K PPTPSPLRFSK+FQSNMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MAKEASNGNHNSATKAPPTPSPLRFSKYFQSNMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAE VKELINP VEI  VENTP
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMMELAETVKELINPEVEIIGVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           DDPRQRKPDITKA ELLGWEPKIKLRDGLPLME+DFR RL VPR+N
Sbjct: 301 DDPRQRKPDITKAKELLGWEPKIKLRDGLPLMEEDFRRRLEVPREN 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109544|ref|XP_002315231.1| predicted protein [Populus trichocarpa] gi|118483816|gb|ABK93800.1| unknown [Populus trichocarpa] gi|118485318|gb|ABK94518.1| unknown [Populus trichocarpa] gi|222864271|gb|EEF01402.1| predicted protein [Populus trichocarpa]

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/346 (93%), Positives = 336/346 (97%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           M++E SNG+HNSA+K PPTPSPLRFSKFFQSNMRIL+TGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MSKEASNGDHNSAAKAPPTPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQNESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAENVKELINP V+I  VENTP
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKELINPEVKIISVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           DDPRQRKPDITKA ELLGWEPKIKLRDGLPLME+DFR RL VPRKN
Sbjct: 301 DDPRQRKPDITKAKELLGWEPKIKLRDGLPLMEEDFRQRLGVPRKN 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192338748|gb|ACF04279.1| UDP-D-glucuronate carboxy-lyase [Eucalyptus grandis]

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/346 (92%), Positives = 337/346 (97%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA++ SNG ++S +KPPPTPSPLRFSKFFQ NMRILVTGGAGFIGSHLVDKLMENEKNEV
Sbjct: 1   MAKQASNGENHSVAKPPPTPSPLRFSKFFQPNMRILVTGGAGFIGSHLVDKLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DN+FTG+K+NL+KWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNFFTGTKENLKKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIR+ARIFNTYGPRMNIDDGRVVSNFIAQA+RGEPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAVRGEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAE VKELINP+VEITMVENTP
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAETVKELINPDVEITMVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           DDPRQRKPDITKA ELLGWEPK+KLR+GLPLMEDDFRLRL  PRKN
Sbjct: 301 DDPRQRKPDITKAKELLGWEPKVKLRNGLPLMEDDFRLRLDKPRKN 346

Source: Eucalyptus grandis

Species: Eucalyptus grandis

Genus: Eucalyptus

Family: Myrtaceae

Order: Myrtales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449563|ref|XP_002283871.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera] gi|147766093|emb|CAN65700.1| hypothetical protein VITISV_010481 [Vitis vinifera] gi|296086255|emb|CBI31696.3| unnamed protein product [Vitis vinifera]

 Score =  675 bits (1741), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/344 (93%), Positives = 334/344 (97%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA+E+SNG+HNS +KPPPTPSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct: 1   MAKEVSNGDHNSVTKPPPTPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ+ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQEESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE LTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGESLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGL+RLMEG+NTGPINIGNPGEFTMLELAE VKELINP VEI+MVENTP
Sbjct: 241 TRSFCYVSDMVDGLVRLMEGDNTGPINIGNPGEFTMLELAETVKELINPKVEISMVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
           DDPRQRKPDITKA ELLGWEP +KLR+GLPLME+DFRLRL V +
Sbjct: 301 DDPRQRKPDITKAKELLGWEPNVKLREGLPLMEEDFRLRLGVAK 344

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459910|ref|XP_004147689.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus] gi|449523904|ref|XP_004168963.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis sativus]

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/344 (91%), Positives = 329/344 (95%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA++ SNG+  +++K PP PSPLR +KFFQ+NMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MAKQSSNGDFYTSTKAPPPPSPLRSAKFFQANMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
            KTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK
Sbjct: 121 TKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNF+AQAIR EPLTVQAPGTQ
Sbjct: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFLAQAIRSEPLTVQAPGTQ 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMV+GLIRLMEG+NTGPINIGNPGEFTMLELAE VKELINPNVEI MVENTP
Sbjct: 241 TRSFCYVSDMVEGLIRLMEGDNTGPINIGNPGEFTMLELAETVKELINPNVEIVMVENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
           DDPRQRKPDITKA E+LGWEPKI LRDGLPLMEDDFR RL VPR
Sbjct: 301 DDPRQRKPDITKAQEVLGWEPKINLRDGLPLMEDDFRARLQVPR 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357454141|ref|XP_003597351.1| UDP-glucuronic acid decarboxylase [Medicago truncatula] gi|217074092|gb|ACJ85406.1| unknown [Medicago truncatula] gi|355486399|gb|AES67602.1| UDP-glucuronic acid decarboxylase [Medicago truncatula]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/340 (92%), Positives = 326/340 (95%)

Query: 7   NGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           NG+  + +K PP PSPLRFSKFFQSNMRILVTGGAGFIGSHLVD+LMENEKNEVIV DNY
Sbjct: 12  NGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNY 71

Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVI 126
           FTG KDNL+KWIGHPRFELIRHDVTE LL+EVD+IYHLACPASPIFYKYNPVKTIKTNVI
Sbjct: 72  FTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVI 131

Query: 127 GTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL 186
           GTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ E+YWGNVNPIGVRSCYDEGKRVAETL
Sbjct: 132 GTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETL 191

Query: 187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY 246
           MFDYHRQHG+EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ PGTQTRSFCY
Sbjct: 192 MFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCY 251

Query: 247 VSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQR 306
           VSDMVDGLIRLMEGENTGPINIGNPGEFTM ELAENVKELINP VEI MVENTPDDPRQR
Sbjct: 252 VSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQR 311

Query: 307 KPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           KPDITKATELLGWEPK+KLRDGLPLME+DFRLRL VPRKN
Sbjct: 312 KPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN 351

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495536|gb|AFK35834.1| unknown [Lotus japonicus]

 Score =  659 bits (1700), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/346 (90%), Positives = 327/346 (94%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           MA + SNG+H  A K PP PSPLRFSKFFQ+NMRILVTGGAGFIGSHLVD+LMENEKNEV
Sbjct: 1   MATDSSNGDHQKAGKQPPLPSPLRFSKFFQANMRILVTGGAGFIGSHLVDRLMENEKNEV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
           IV DN+FTGSKDNL+KWIGHPRFELIRHDVTE LL+EVDQIYHLACPASPIFYKYNPVKT
Sbjct: 61  IVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKT 120

Query: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
           IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGK
Sbjct: 121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGK 180

Query: 181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           RVAETLMFDYH QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ PGT+
Sbjct: 181 RVAETLMFDYHTQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTR 240

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
           TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM+ELAENVKELIN  VEI M+ENTP
Sbjct: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKELINSTVEIKMIENTP 300

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           DDPRQRKPDI KA ELLGWEPK+KLRDGLPLME+DFRLRL V +KN
Sbjct: 301 DDPRQRKPDIAKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVAKKN 346

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248590|ref|NP_001239907.1| uncharacterized protein LOC100790835 [Glycine max] gi|255641885|gb|ACU21211.1| unknown [Glycine max]

 Score =  658 bits (1698), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/348 (91%), Positives = 328/348 (94%), Gaps = 2/348 (0%)

Query: 1   MAQEISNGN--HNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKN 58
           MA + SNGN  H + +K PP PSPLRFSKFFQSNMRILVTGGAGFIGSHLVD+LMENEKN
Sbjct: 1   MATDSSNGNGHHQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKN 60

Query: 59  EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 118
           EVIV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV
Sbjct: 61  EVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPV 120

Query: 119 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE 178
           KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDE
Sbjct: 121 KTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDE 180

Query: 179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
           GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGEPLTVQ PG
Sbjct: 181 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPG 240

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
           TQTRSFCYVSD+VDGLIRLMEG NTGPIN+GNPGEFTM ELAE VKELINP VEI MVEN
Sbjct: 241 TQTRSFCYVSDLVDGLIRLMEGSNTGPINLGNPGEFTMTELAETVKELINPGVEIKMVEN 300

Query: 299 TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           TPDDPRQRKPDITKA ELLGWEPK+KLRDGLP ME+DFRLRL V +KN
Sbjct: 301 TPDDPRQRKPDITKAKELLGWEPKVKLRDGLPRMEEDFRLRLGVGKKN 348

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413968384|gb|AFW90530.1| UDP-glucuronic acid decarboxylase 1-like isoform 1 [Phaseolus vulgaris]

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/342 (92%), Positives = 325/342 (95%)

Query: 5   ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
           ++  + N A+K PP PSPLRFSKFFQSNMRILVTGGAGFIGSHLVD+LMENEKNEV+V D
Sbjct: 1   MATSSSNGAAKQPPMPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVVVAD 60

Query: 65  NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
           N+FTGSKDNL+KWIGHPRFELIRHDVTE LLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct: 61  NFFTGSKDNLKKWIGHPRFELIRHDVTEQLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
           VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGKRVAE
Sbjct: 121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAE 180

Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
           TLMFDYHRQ GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ PGTQTRSF
Sbjct: 181 TLMFDYHRQPGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSF 240

Query: 245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR 304
           CYVSDMVDGLIRLMEGENTGPINIGNPGEFTM ELAENVKELINP VEI MVENTPDDPR
Sbjct: 241 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPR 300

Query: 305 QRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           QRKPDITKA ELLGWEPKIKLRDGLPLME+DFRLRL VP KN
Sbjct: 301 QRKPDITKAKELLGWEPKIKLRDGLPLMEEDFRLRLGVPNKN 342

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2053275	343	UXS6 "UDP-XYL synthase 6" [Ara	0.991	1.0	0.892	1.5e-168
TAIR|locus:2078206	341	UXS5 "UDP-XYL synthase 5" [Ara	0.985	1.0	0.888	2.9e-167
TAIR|locus:2168539	357	UXS3 "UDP-glucuronic acid deca	0.962	0.932	0.900	4.2e-166
TAIR|locus:2081675	445	AUD1 "AT3G62830" [Arabidopsis	0.895	0.696	0.729	1.3e-123
UNIPROTKB|E1BV28	421	UXS1 "Uncharacterized protein"	0.933	0.767	0.627	4.3e-109
UNIPROTKB|E1BMI4	420	UXS1 "Uncharacterized protein"	0.933	0.769	0.621	2.1e-107
UNIPROTKB|B3KV61	363	UXS1 "UDP-glucuronate decarbox	0.933	0.889	0.618	2.1e-107
UNIPROTKB|Q8NBZ7	420	UXS1 "UDP-glucuronic acid deca	0.933	0.769	0.618	2.1e-107
MGI|MGI:1915133	420	Uxs1 "UDP-glucuronate decarbox	0.933	0.769	0.618	2.1e-107
RGD|628680	420	Uxs1 "UDP-glucuronate decarbox	0.933	0.769	0.618	2.1e-107

TAIR|locus:2053275 UXS6 "UDP-XYL synthase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 1639 (582.0 bits), Expect = 1.5e-168, P = 1.5e-168
 Identities = 308/345 (89%), Positives = 325/345 (94%)

Query:     1 MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
             MA   SNG   + +KPPP PSPLR SKFFQSNMRILVTGGAGFIGSHLVDKLM+NEKNEV
Sbjct:     1 MASNSSNGT--TTTKPPPMPSPLRNSKFFQSNMRILVTGGAGFIGSHLVDKLMQNEKNEV 58

Query:    61 IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT 120
             IV DNYFTGSKDNL+KWIGHPRFELIRHDVTEPL +EVDQIYHLACPASPIFYKYNPVKT
Sbjct:    59 IVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLFVEVDQIYHLACPASPIFYKYNPVKT 118

Query:   121 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK 180
             IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQ ESYWGNVNPIGVRSCYDEGK
Sbjct:   119 IKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGK 178

Query:   181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
             RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQ
Sbjct:   179 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ 238

Query:   241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
             TRSFCYVSDMV+GL+RLMEG+ TGPINIGNPGEFTM+ELAE VKELI P+VEI MVENTP
Sbjct:   239 TRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTP 298

Query:   301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
             DDPRQRKPDI+KA E+LGWEPK+KLR+GLPLME+DFRLRL VP+K
Sbjct:   299 DDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVPKK 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA

TAIR|locus:2078206 UXS5 "UDP-XYL synthase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
 Identities = 304/342 (88%), Positives = 326/342 (95%)

Query:     5 ISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
             +++ +  ++ KPPP+PSPLR SKF QSNMRIL++GGAGFIGSHLVDKLMENEKNEVIV D
Sbjct:     1 MASSDKQTSPKPPPSPSPLRNSKFCQSNMRILISGGAGFIGSHLVDKLMENEKNEVIVAD 60

Query:    65 NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 124
             NYFTGSKDNL+KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN
Sbjct:    61 NYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTN 120

Query:   125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
             VIGTLNMLGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAE
Sbjct:   121 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAE 180

Query:   185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
             TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSF
Sbjct:   181 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSF 240

Query:   245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR 304
             CYVSDMVDGL+RLMEG++TGPINIGNPGEFTM+ELAE VKELINP++EI MVENTPDDPR
Sbjct:   241 CYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPR 300

Query:   305 QRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
             QRKPDITKA E+LGWEPK+KLR+GLPLME+DFRLRL V  KN
Sbjct:   301 QRKPDITKAKEVLGWEPKVKLREGLPLMEEDFRLRLGV-HKN 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=RCA;TAS

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009749 "response to glucose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

TAIR|locus:2168539 UXS3 "UDP-glucuronic acid decarboxylase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
 Identities = 300/333 (90%), Positives = 320/333 (96%)

Query:    12 SASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
             + +KPPP+PSPLR SKF Q NMRIL++GGAGFIGSHLVDKLMENEKNEV+V DNYFTGSK
Sbjct:    24 NTTKPPPSPSPLRNSKFCQPNMRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSK 83

Query:    72 DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
             +NL+KWIGHPRFELIRHDVTEPLLIEVD+IYHLACPASPIFYKYNPVKTIKTNVIGTLNM
Sbjct:    84 ENLKKWIGHPRFELIRHDVTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 143

Query:   132 LGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 191
             LGLAKRVGARILLTSTSEVYGDPL+HPQ ESYWGNVNPIGVRSCYDEGKRVAETLMFDYH
Sbjct:   144 LGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYH 203

Query:   192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA+RGE LTVQ PGTQTRSFCYVSDMV
Sbjct:   204 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMV 263

Query:   252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT 311
             DGLIRLMEG +TGPINIGNPGEFTM+ELAE VKELINP++EI MVENTPDDPRQRKPDI+
Sbjct:   264 DGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDIS 323

Query:   312 KATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
             KA E+LGWEPK+KLR+GLPLME+DFRLRL VPR
Sbjct:   324 KAKEVLGWEPKVKLREGLPLMEEDFRLRLNVPR 356

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0042732 "D-xylose metabolic process" evidence=RCA;IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

TAIR|locus:2081675 AUD1 "AT3G62830" [Arabidopsis thaliana (taxid:3702)]

 Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
 Identities = 227/311 (72%), Positives = 261/311 (83%)

Query:    30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
             +  +R++VTGGAGF+GSHLVD+LM    + VIVVDN+FTG K+N+     +P FE+IRHD
Sbjct:   116 RKGLRVVVTGGAGFVGSHLVDRLMARG-DTVIVVDNFFTGRKENVMHHFSNPNFEMIRHD 174

Query:    90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
             V EP+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct:   175 VVEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSE 234

Query:   150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
             VYGDPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR   +E+RIARIFNTYGP
Sbjct:   235 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGP 294

Query:   210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG 269
             RM IDDGRVVSNF+AQA+R EPLTV   G QTRSF +VSD+V+GL+RLMEGE+ GP N+G
Sbjct:   295 RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLG 354

Query:   270 NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
             NPGEFTMLELA+ V+E I+PN  I    NT DDP +RKPDITKA ELLGWEPK+ LR GL
Sbjct:   355 NPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGL 414

Query:   330 PLMEDDFRLRL 340
             PLM  DFR R+
Sbjct:   415 PLMVKDFRQRV 425

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS

GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS

GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS

GO:0016020 "membrane" evidence=TAS

GO:0042732 "D-xylose metabolic process" evidence=IDA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|E1BV28 UXS1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 204/325 (62%), Positives = 248/325 (76%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    80 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 137

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   138 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 197

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   198 LLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV  PGTQTR+F YVSD+V+GL+ LM   
Sbjct:   258 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNSN 317

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K+L+    EI  +    DDP++RKPDI KA  LLGWEP
Sbjct:   318 VSSPVNLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGWEP 377

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   378 VVPLEEGLNKAIHYFRKELEYQANN 402

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BMI4 UXS1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 202/325 (62%), Positives = 245/325 (75%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RILVTGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILVTGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   377 VVPLEEGLNKAIHYFRKELEYQANN 401

GO:0050662 "coenzyme binding" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|B3KV61 UXS1 "UDP-glucuronate decarboxylase 1, isoform CRA_a" [Homo sapiens (taxid:9606)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 201/325 (61%), Positives = 245/325 (75%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    22 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 79

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:    80 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 139

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   140 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   200 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 259

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP
Sbjct:   260 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 319

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   320 VVPLEEGLNKAIHYFRKELEYQANN 344

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|Q8NBZ7 UXS1 "UDP-glucuronic acid decarboxylase 1" [Homo sapiens (taxid:9606)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 201/325 (61%), Positives = 245/325 (75%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   377 VVPLEEGLNKAIHYFRKELEYQANN 401

GO:0000166 "nucleotide binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

MGI|MGI:1915133 Uxs1 "UDP-glucuronate decarboxylase 1" [Mus musculus (taxid:10090)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 201/325 (61%), Positives = 245/325 (75%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   377 VVPLEEGLNKAIHYFRKELEYQANN 401

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISO

GO:0050662 "coenzyme binding" evidence=IEA

RGD|628680 Uxs1 "UDP-glucuronate decarboxylase 1" [Rattus norvegicus (taxid:10116)]

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 201/325 (61%), Positives = 245/325 (75%)

Query:    22 PLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP 81
             P++F    +   RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH 
Sbjct:    79 PVKFLSE-KDRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHE 136

Query:    82 RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
              FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR
Sbjct:   137 NFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR 196

Query:   142 ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             +LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+A
Sbjct:   197 LLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256

Query:   202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
             RIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM   
Sbjct:   257 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN 316

Query:   262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP 321
              + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP
Sbjct:   317 VSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEP 376

Query:   322 KIKLRDGLPLMEDDFRLRLAVPRKN 346
              + L +GL      FR  L     N
Sbjct:   377 VVPLEEGLNKAIHYFRKELEYQANN 401

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0033320 "UDP-D-xylose biosynthetic process" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA

GO:0050662 "coenzyme binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R885	UXS1_PONAB	4, ., 1, ., 1, ., 3, 5	0.6357	0.9017	0.7428	yes	no
Q57664	GALE_METJA	5, ., 1, ., 3, ., 2	0.3462	0.8005	0.9081	yes	no
Q8NBZ7	UXS1_HUMAN	4, ., 1, ., 1, ., 3, 5	0.6357	0.9017	0.7428	yes	no
Q9ZAE8	RMLB_ACTS5	4, ., 2, ., 1, ., 4, 6	0.3099	0.8352	0.9031	yes	no
Q6GMI9	UXS1_DANRE	4, ., 1, ., 1, ., 3, 5	0.6486	0.8526	0.7057	yes	no
Q5PQX0	UXS1_RAT	4, ., 1, ., 1, ., 3, 5	0.6357	0.9017	0.7428	yes	no
Q91XL3	UXS1_MOUSE	4, ., 1, ., 1, ., 3, 5	0.6357	0.9017	0.7428	yes	no
Q6DF08	UXS1_XENTR	4, ., 1, ., 1, ., 3, 5	0.5906	0.9595	0.7885	yes	no
O34886	YTCB_BACSU	4, ., -, ., -, ., -	0.3035	0.8265	0.9050	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_VIII0190	SubName- Full=Putative uncharacterized protein; (347 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.2059.13.1	annotation not avaliable (156 aa)	•					•	•		0.593
	gw1.2059.8.1	Predicted protein (274 aa)	•					•	•		0.523

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	0.0
PLN02206	442	PLN02206, PLN02206, UDP-glucuronate decarboxylase	0.0
PLN02166	436	PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase	1e-178
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	2e-83
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	6e-78
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	5e-66
cd08946	200	cd08946, SDR_e, extended (e) SDRs	5e-57
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	3e-54
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	1e-53
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	7e-53
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	8e-52
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	4e-45
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	7e-43
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	8e-41
TIGR01181	317	TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd	1e-39
COG1088	340	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel	2e-38
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	1e-37
PRK11908	347	PRK11908, PRK11908, NAD-dependent epimerase/dehydr	3e-37
cd05253	332	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimera	6e-37
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	6e-35
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	2e-34
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	1e-32
TIGR01179	328	TIGR01179, galE, UDP-glucose-4-epimerase GalE	1e-32
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	2e-30
PLN02695	370	PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase	3e-29
cd05248	317	cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannohepto	1e-28
PRK08125	660	PRK08125, PRK08125, bifunctional UDP-glucuronic ac	4e-27
PLN02260	668	PLN02260, PLN02260, probable rhamnose biosynthetic	4e-26
TIGR02197	314	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-hep	7e-26
PRK10217	355	PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase;	6e-25
PRK10084	352	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase;	3e-23
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	1e-20
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-20
cd05237	287	cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l	9e-20
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	1e-18
COG1091	281	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C	2e-18
PRK15181	348	PRK15181, PRK15181, Vi polysaccharide biosynthesis	1e-17
COG1086	588	COG1086, COG1086, Predicted nucleoside-diphosphate	2e-17
PLN02725	306	PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-	1e-16
cd05261	248	cd05261, CAPF_like_SDR_e, capsular polysaccharide	1e-16
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	8e-16
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	9e-16
COG1089	345	COG1089, Gmd, GDP-D-mannose dehydratase [Cell enve	2e-15
pfam02719	280	pfam02719, Polysacc_synt_2, Polysaccharide biosynt	5e-15
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	3e-14
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	2e-13
cd05255	382	cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synth	3e-13
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	5e-13
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	5e-13
TIGR02622	349	TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydra	1e-12
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-12
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-11
TIGR04130	337	TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd	3e-11
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	3e-11
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	4e-11
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	8e-11
TIGR01214	287	TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase	1e-10
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	3e-10
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	5e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-09
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	3e-09
TIGR01472	343	TIGR01472, gmd, GDP-mannose 4,6-dehydratase	4e-09
cd05229	302	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3	7e-09
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	8e-09
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	1e-08
cd05272	308	cd05272, TDH_SDR_e, L-threonine dehydrogenase, ext	6e-08
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	7e-08
pfam04321	284	pfam04321, RmlD_sub_bind, RmlD substrate binding d	3e-07
TIGR03589	324	TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehyd	2e-06
PLN02653	340	PLN02653, PLN02653, GDP-mannose 4,6-dehydratase	2e-06
PRK11150	308	PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epi	4e-06
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	6e-06
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	4e-05
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	4e-05
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	5e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-04
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	1e-04
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	2e-04
PLN02572	442	PLN02572, PLN02572, UDP-sulfoquinovose synthase	3e-04
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	6e-04
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.001
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	0.002
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	0.004

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score =  595 bits (1537), Expect = 0.0
 Identities = 215/306 (70%), Positives = 252/306 (82%), Gaps = 2/306 (0%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            RIL+TGGAGF+GSHL D+L+  + +EVI VDN+FTG K N+   IGHP FE IRHDVTE
Sbjct: 1   KRILITGGAGFLGSHLCDRLL-EDGHEVICVDNFFTGRKRNIEHLIGHPNFEFIRHDVTE 59

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           PL +EVDQIYHLACPASP+ Y+YNP+KT+KTNV+GTLNMLGLAKRVGAR+LL STSEVYG
Sbjct: 60  PLYLEVDQIYHLACPASPVHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLASTSEVYG 119

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           DP VHPQ ESYWGNVNPIG RSCYDEGKRVAETL   YHRQHG+++RIARIFNTYGPRM+
Sbjct: 120 DPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARIFNTYGPRMH 179

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNP 271
            +DGRVVSNFI QA+RGEP+TV   GTQTRSF YVSD+V+GLIRLM  +   GP+N+GNP
Sbjct: 180 PNDGRVVSNFIVQALRGEPITVYGDGTQTRSFQYVSDLVEGLIRLMNSDYFGGPVNLGNP 239

Query: 272 GEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
            EFT+LELAE VK+L     EI  +    DDP++R+PDI+KA ELLGWEPK+ L +GL  
Sbjct: 240 EEFTILELAELVKKLTGSKSEIVFLPLPEDDPKRRRPDISKAKELLGWEPKVPLEEGLRR 299

Query: 332 MEDDFR 337
             + FR
Sbjct: 300 TIEYFR 305

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|177856 PLN02206, PLN02206, UDP-glucuronate decarboxylase

 Score =  519 bits (1339), Expect = 0.0
 Identities = 228/308 (74%), Positives = 261/308 (84%), Gaps = 1/308 (0%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           +R++VTGGAGF+GSHLVD+LM    + VIVVDN+FTG K+N+     +P FELIRHDV E
Sbjct: 120 LRVVVTGGAGFVGSHLVDRLMARGDS-VIVVDNFFTGRKENVMHHFSNPNFELIRHDVVE 178

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           P+L+EVDQIYHLACPASP+ YK+NPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSEVYG
Sbjct: 179 PILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYG 238

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           DPL HPQ E+YWGNVNPIGVRSCYDEGKR AETL  DYHR   +E+RIARIFNTYGPRM 
Sbjct: 239 DPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMC 298

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPG 272
           IDDGRVVSNF+AQA+R EPLTV   G QTRSF +VSD+V+GL+RLMEGE+ GP N+GNPG
Sbjct: 299 IDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPG 358

Query: 273 EFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM 332
           EFTMLELA+ V+E I+PN +I    NT DDP +RKPDITKA ELLGWEPK+ LR GLPLM
Sbjct: 359 EFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLM 418

Query: 333 EDDFRLRL 340
             DFR R+
Sbjct: 419 VKDFRQRV 426

Length = 442

>gnl|CDD|165812 PLN02166, PLN02166, dTDP-glucose 4,6-dehydratase

 Score =  500 bits (1288), Expect = e-178
 Identities = 230/311 (73%), Positives = 261/311 (83%), Gaps = 1/311 (0%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           +  +RI+VTGGAGF+GSHLVDKL+    +EVIV+DN+FTG K+NL    G+PRFELIRHD
Sbjct: 118 RKRLRIVVTGGAGFVGSHLVDKLI-GRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD 176

Query: 90  VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
           V EP+L+EVDQIYHLACPASP+ YKYNPVKTIKTNV+GTLNMLGLAKRVGAR LLTSTSE
Sbjct: 177 VVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSE 236

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
           VYGDPL HPQ E+YWGNVNPIG RSCYDEGKR AETL  DYHR  G+E+RIARIFNTYGP
Sbjct: 237 VYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGP 296

Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIG 269
           RM +DDGRVVSNF+AQ IR +P+TV   G QTRSF YVSD+VDGL+ LMEGE+ GP N+G
Sbjct: 297 RMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHVGPFNLG 356

Query: 270 NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           NPGEFTMLELAE VKE I+ +  I    NT DDP +RKPDI+KA ELL WEPKI LR+GL
Sbjct: 357 NPGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGL 416

Query: 330 PLMEDDFRLRL 340
           PLM  DFR R+
Sbjct: 417 PLMVSDFRNRI 427

Length = 436

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score =  254 bits (652), Expect = 2e-83
 Identities = 120/310 (38%), Positives = 171/310 (55%), Gaps = 21/310 (6%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+LVTGGAGFIGSHLV++L+E   +EVIV+DN  TG K+NL +    P  + I  D+   
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERG-HEVIVLDNLSTGKKENLPE--VKPNVKFIEGDIRDD 57

Query: 92  ---EPLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
              E     VD ++H A  AS P   + +P+K  + NV+GTLN+L  A++ G  R +  S
Sbjct: 58  ELVEFAFEGVDYVFHQAAQASVPRSIE-DPIKDHEVNVLGTLNLLEAARKAGVKRFVYAS 116

Query: 147 TSEVYGDPLVHPQDESYWGN-VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           +S VYGDP   P+DE +  N ++P  V       K   E     + R +G+     R FN
Sbjct: 117 SSSVYGDPPYLPKDEDHPPNPLSPYAV------SKYAGELYCQVFARLYGLPTVSLRYFN 170

Query: 206 TYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
            YGPR + + G   V+  FI +A++GEP T+   G QTR F YV D+V+  +        
Sbjct: 171 VYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAG 230

Query: 264 GPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
           G + NIG     ++ ELAE ++E++   +E       P D R    DI+KA +LLGWEPK
Sbjct: 231 GEVYNIGTGKRTSVNELAELIREILGKELEPVYAPPRPGDVRHSLADISKAKKLLGWEPK 290

Query: 323 IKLRDGLPLM 332
           +   +GL L 
Sbjct: 291 VSFEEGLRLT 300

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  240 bits (615), Expect = 6e-78
 Identities = 116/315 (36%), Positives = 159/315 (50%), Gaps = 16/315 (5%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRILVTGGAGFIGSHLV++L+    ++V  +D    G        +     +L   D+ +
Sbjct: 1   MRILVTGGAGFIGSHLVERLLA-AGHDVRGLDRLRDGLDPL-LSGVEFVVLDLTDRDLVD 58

Query: 93  PLLIEV-DQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTST-S 148
            L   V D + HLA  +S       +P + +  NV GTLN+L  A+  G  R +  S+ S
Sbjct: 59  ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVS 118

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYGDP   P DE   G   P    + Y   K  AE L+  Y R +G+ + I R FN YG
Sbjct: 119 VVYGDPPPLPIDEDL-GPPRP---LNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG 174

Query: 209 PRMNID-DGRVVSNFIAQAIRGEPL-TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
           P    D    VVS FI Q ++GEP+  +   G+QTR F YV D+ D L+  +E  + G  
Sbjct: 175 PGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGGVF 234

Query: 267 NIGNPG-EFTMLELAENVKELIN---PNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
           NIG+   E T+ ELAE V E +    P +    +    D    +  DI+KA   LGWEPK
Sbjct: 235 NIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPK 294

Query: 323 IKLRDGLPLMEDDFR 337
           + L +GL    +   
Sbjct: 295 VSLEEGLADTLEWLL 309

Length = 314

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score =  210 bits (537), Expect = 5e-66
 Identities = 112/317 (35%), Positives = 156/317 (49%), Gaps = 32/317 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            +LVTG  GFIGSHL ++L+  E +EV  +D Y + +   L     H RF  I  DV + 
Sbjct: 1   NVLVTGADGFIGSHLTERLLR-EGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDA 59

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTST 147
             +E      D ++HLA   +  +    P+  ++TNV GTLN+L  A  +   R++ TST
Sbjct: 60  SEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYVETNVFGTLNVLEAACVLYRKRVVHTST 119

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGV----RSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           SEVYG     P DE      +P+      RS Y   K+ A+ L + Y R  G+ + I R 
Sbjct: 120 SEVYGTAQDVPIDED-----HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVTIIRP 174

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE-- 261
           FNTYGPR       V+   I+Q   G+ L     G+ TR F +V D   G I +++    
Sbjct: 175 FNTYGPRQ--SARAVIPTIISQRAIGQRLINLGDGSPTRDFNFVKDTARGFIDILDAIEA 232

Query: 262 --------NTGPINIGNPG-EFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITK 312
                   +   I+IGNP  E  + EL E V  + + + E         +  +R PDI K
Sbjct: 233 VGEIINNGSGEEISIGNPAVELIVEELGEMVLIVYDDHREY---RPGYSEVERRIPDIRK 289

Query: 313 ATELLGWEPKIKLRDGL 329
           A  LLGWEPK  LRDGL
Sbjct: 290 AKRLLGWEPKYSLRDGL 306

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score =  183 bits (466), Expect = 5e-57
 Identities = 82/238 (34%), Positives = 114/238 (47%), Gaps = 41/238 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAGFIGSHLV +L     +EV+V+D                              
Sbjct: 1   ILVTGGAGFIGSHLVRRL-LERGHEVVVIDRL---------------------------- 31

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD 153
               D + HLA          NP +  +TNV+GTLN+L  A++ G  R +  S++ VYG 
Sbjct: 32  ----DVVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGS 87

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P   P++E       P+   S Y   K  AE L+  Y   +G+ + I R+ N YGP    
Sbjct: 88  PEGLPEEEETP--PRPL---SPYGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRP 142

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIG 269
               VV++FI +A+ G+PLTV   G QTR F +V D+V  ++  +E      G  NIG
Sbjct: 143 RLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVYNIG 200

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score =  179 bits (457), Expect = 3e-54
 Identities = 102/300 (34%), Positives = 144/300 (48%), Gaps = 21/300 (7%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RILVTGGAGFIGSHLVD+L+E E NEV+VVDN  +G ++N+     +  F  ++ D+ + 
Sbjct: 1   RILVTGGAGFIGSHLVDRLLE-EGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDT 59

Query: 94  L----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  + D ++HLA          +P   ++ NV+ T N+L   +  G  RI+  S+S
Sbjct: 60  ADKVAKKDGDTVFHLAANPDVRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSS 119

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYG+  V P  E Y     PI   S Y   K  AE L+  Y    G +  I R  N  G
Sbjct: 120 TVYGEAKVIPTPEDY--PPLPI---SVYGASKLAAEALISAYAHLFGFQAWIFRFANIVG 174

Query: 209 PRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLME--GENTGP 265
           PR       V+ +FI +  R    L V   G Q +S+ YVSD VD ++   E   E    
Sbjct: 175 PRST---HGVIYDFINKLKRNPNELEVLGDGRQRKSYLYVSDCVDAMLLAWEKSTEGVNI 231

Query: 266 INIGNPGEFTMLELAENVKELINPNVEITMVENT---PDDPRQRKPDITKATELLGWEPK 322
            N+GN    ++ E+AE V E +                 D    + DI K  + LGW+P+
Sbjct: 232 FNLGNDDTISVNEIAEIVIEELGLKPRFKYSGGDRGWKGDVPYMRLDIEKL-KALGWKPR 290

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  175 bits (447), Expect = 1e-53
 Identities = 82/249 (32%), Positives = 115/249 (46%), Gaps = 30/249 (12%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGG GFIGSHLV +L++        V       +      +   R      D+T+P 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEG----YEVIVLGRRRRSES---LNTGRIRFHEGDLTDPD 53

Query: 95  LIE-------VDQIYHLA----CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RI 142
            +E        D + HLA      AS      +P   I+ NV+GTL +L  A+R G  R 
Sbjct: 54  ALERLLAEVQPDAVIHLAAQSGVGAS----FEDPADFIRANVLGTLRLLEAARRAGVKRF 109

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +  S+SEVYGD    P  E       P+G  S Y   K  AE L+  Y R +G+   I R
Sbjct: 110 VFASSSEVYGDVADPPITEDT-----PLGPLSPYAAAKLAAERLVEAYARAYGLRAVILR 164

Query: 203 IFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-G 260
           +FN YGP   +     V+   I + + G+P+ +   GTQ R F YV D+   ++  +E  
Sbjct: 165 LFNVYGPGNPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP 224

Query: 261 ENTGPINIG 269
           +     NIG
Sbjct: 225 DGGEIYNIG 233

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score =  176 bits (449), Expect = 7e-53
 Identities = 100/311 (32%), Positives = 132/311 (42%), Gaps = 22/311 (7%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R LVTG  GFIGSHL ++L   E + V   D                   +L   +    
Sbjct: 2   RALVTGAGGFIGSHLAERLKA-EGHYVRGADWKSPEHMTQPTDDDEFHLVDLREMENCLK 60

Query: 94  LLIEVDQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151
               VD ++HLA     + Y + N    +  N +   NML  A+  G  R L  S++ VY
Sbjct: 61  ATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFASSACVY 120

Query: 152 GDPLVHPQDESYWGNVN--------PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
                 P+ +     V         P   +  Y   K   E L   Y+  +GIE RI R 
Sbjct: 121 ------PEFKQLETTVVRLREEDAWPAEPQDAYGWEKLATERLCQHYNEDYGIETRIVRF 174

Query: 204 FNTYGPRMNIDDGR-----VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            N YGPR   D GR      +   +A A  G+   +   G QTRSF Y+ D V+GL RLM
Sbjct: 175 HNIYGPRGTWDGGREKAPAAMCRKVATAKDGDRFEIWGDGLQTRSFTYIDDCVEGLRRLM 234

Query: 259 EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLG 318
           E +   P+N+G+    +M ELAE V       +EI      P   R R  D T   E LG
Sbjct: 235 ESDFGEPVNLGSDEMVSMNELAEMVLSFSGKPLEIIHHTPGPQGVRGRNSDNTLLKEELG 294

Query: 319 WEPKIKLRDGL 329
           WEP   L +GL
Sbjct: 295 WEPNTPLEEGL 305

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score =  173 bits (442), Expect = 8e-52
 Identities = 102/314 (32%), Positives = 154/314 (49%), Gaps = 28/314 (8%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDV 90
           M+ILVTGGAGFIGS+ V  L+    + ++I +D   + G+ +NL      PR+  ++ D+
Sbjct: 1   MKILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFVKGDI 60

Query: 91  TEPLLI-------EVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
            +  L+       ++D + H A       S I    +P   I+TNV+GT  +L  A++ G
Sbjct: 61  CDAELVDRLFEEEKIDAVIHFAAESHVDRS-I---SDPEPFIRTNVLGTYTLLEAARKYG 116

Query: 140 A-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
             R +  ST EVYGD        E+    + P    S Y   K  A+ L+  YHR +G+ 
Sbjct: 117 VKRFVHISTDEVYGDLLDDGEFTETS--PLAP---TSPYSASKAAADLLVRAYHRTYGLP 171

Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
           + I R  N YGP    +  +++  FI  A+ G+PL +   G   R + YV D    +  +
Sbjct: 172 VVITRCSNNYGPYQFPE--KLIPLFILNALDGKPLPIYGDGLNVRDWLYVEDHARAIELV 229

Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKE-LINPNVEITMVENTPDDPRQRKPDITKATE 315
           +E    G I NIG   E T LEL + + E L      IT V++ P   R+   D +K   
Sbjct: 230 LEKGRVGEIYNIGGGNELTNLELVKLILELLGKDESLITYVKDRPGHDRRYAIDSSKIRR 289

Query: 316 LLGWEPKIKLRDGL 329
            LGW PK+   +GL
Sbjct: 290 ELGWRPKVSFEEGL 303

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score =  155 bits (395), Expect = 4e-45
 Identities = 104/311 (33%), Positives = 150/311 (48%), Gaps = 39/311 (12%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFT--GSKDNLRKWIGHPRFELIRHDVT 91
           +LVTG  GFIGSHLV+ L+         V+ N F   G  D     +   + E++  D+ 
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVLYNSFNSWGWLDTSPPEV-KDKIEVVTGDIR 59

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
           +P  +       D ++HLA   + I Y Y  P   + TNV GTLN+L  A+ +G  +++ 
Sbjct: 60  DPDSVRKAMKGCDVVFHLAALIA-IPYSYIAPDSYVDTNVTGTLNVLQAARDLGVEKVVH 118

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSTSEVYG     P DE +     P+  +S Y   K  A+ L   ++R     + I R F
Sbjct: 119 TSTSEVYGTAQYVPIDEKH-----PLQGQSPYSASKIGADQLALSFYRSFNTPVTIIRPF 173

Query: 205 NTYGPRMNIDDGR-VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           NTYGPR +    R V+   I Q   G+        + TR F YV+D V G I + E + T
Sbjct: 174 NTYGPRQS---ARAVIPTIITQIASGKRRIKLGSLSPTRDFNYVTDTVRGFIAIAESDKT 230

Query: 264 -GP-INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP----------DIT 311
            G  INIG+  E ++ +  + + E++   VEI       D+ R R P          D +
Sbjct: 231 VGEVINIGSNFEISIGDTVKLIAEIMGSEVEIET-----DEERLR-PEKSEVERLWCDNS 284

Query: 312 KATELLGWEPK 322
           K  EL GW+PK
Sbjct: 285 KIKELTGWQPK 295

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score =  151 bits (383), Expect = 7e-43
 Identities = 97/337 (28%), Positives = 151/337 (44%), Gaps = 41/337 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIGHPRFELIRH 88
           MR+L+TGGAGFIGS+L    ++    EVI  DN       G+   L+          +  
Sbjct: 1   MRVLITGGAGFIGSNLARFFLKQG-WEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHG 59

Query: 89  DV-----TEPLLIEVDQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--A 140
           D+      E L  ++D I H A  P+       +P    +TN +GTLN+L  A++    A
Sbjct: 60  DIRNRNDLEDLFEDIDLIIHTAAQPSVTTSAS-SPRLDFETNALGTLNVLEAARQHAPNA 118

Query: 141 RILLTSTSEVYGD-----PLVHPQDESYW----GNVNPIGV---------RSCYDEGKRV 182
             + TST++VYGD     PL   + E+ +       +P G+          S Y   K  
Sbjct: 119 PFIFTSTNKVYGDLPNYLPLE--ELETRYELAPEGWSPAGISESFPLDFSHSLYGASKGA 176

Query: 183 AETLMFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPG-TQ 240
           A+  + +Y R  G++  + R     GPR    +D   V+ F+  A+ G+PLT+   G  Q
Sbjct: 177 ADQYVQEYGRIFGLKTVVFRCGCLTGPRQFGTEDQGWVAYFLKCAVTGKPLTIFGYGGKQ 236

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGP---INIGNPGE--FTMLELAENVKELINPNVEITM 295
            R   + +D+V+  +R  +  +       NIG   E   ++LEL    +E+    +E   
Sbjct: 237 VRDVLHSADLVNLYLRQFQNPDRRKGEVFNIGGGRENSVSLLELIALCEEITGRKMESYK 296

Query: 296 VENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM 332
            EN P D      DI K  E  GW+P+   R+ L  +
Sbjct: 297 DENRPGDQIWYISDIRKIKEKPGWKPERDPREILAEI 333

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score =  144 bits (366), Expect = 8e-41
 Identities = 98/319 (30%), Positives = 136/319 (42%), Gaps = 43/319 (13%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI------R 87
           R+L+ GG GFIGSHLVD L+E     V V D         L         + I      R
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQ-VRVFDRSI--PPYELPLG----GVDYIKGDYENR 53

Query: 88  HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL--AKRVGARILLT 145
            D+    L+ +D + HLA   +P     NP+  I+TNV  T+ +L    A  +G  I  +
Sbjct: 54  ADLES-ALVGIDTVIHLASTTNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS 112

Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           S   VYG P   P  ES      PI   S Y   K   E  +  Y   +G++  + RI N
Sbjct: 113 SGGTVYGVPEQLPISESD--PTLPI---SSYGISKLAIEKYLRLYQYLYGLDYTVLRISN 167

Query: 206 TYGPRMNIDDGR-VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
            YGP    D  + V+   + + +RGEP+ +   G   R + Y+ D+V+ L+ L+  +   
Sbjct: 168 PYGPGQRPDGKQGVIPIALNKILRGEPIEIWGDGESIRDYIYIDDLVEALMALLRSKGLE 227

Query: 265 PI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP----------DITKA 313
            + NIG+ G    L       ELI    EI  V                      DI++A
Sbjct: 228 EVFNIGS-GIGYSL------AELIA---EIEKVTGRSVQVIYTPARTTDVPKIVLDISRA 277

Query: 314 TELLGWEPKIKLRDGLPLM 332
              LGW PKI L DGL   
Sbjct: 278 RAELGWSPKISLEDGLEKT 296

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase

 Score =  141 bits (358), Expect = 1e-39
 Identities = 101/309 (32%), Positives = 149/309 (48%), Gaps = 19/309 (6%)

Query: 34  RILVTGGAGFIGSHLVDK-LMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           RILVTGGAGFIGS+ V   L E+   EVIV+D   + G+ +NL     +PR+  ++ D+ 
Sbjct: 1   RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIG 60

Query: 92  EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARI 142
           +  L+       + D + H A  +        P   I+TNV+GT  +L   ++     R 
Sbjct: 61  DRELVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRF 120

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              ST EVYGD     +    +    P+   S Y   K  ++ L+  YHR +G+   I R
Sbjct: 121 HHISTDEVYGD----LEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTYGLPALITR 176

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
             N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    +  ++E   
Sbjct: 177 CSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR 234

Query: 263 TGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWE 320
            G   NIG   E T LE+ E + EL+  + + IT VE+ P   R+   D +K    LGW 
Sbjct: 235 VGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWA 294

Query: 321 PKIKLRDGL 329
           PK    +GL
Sbjct: 295 PKYTFEEGL 303

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317

>gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

 Score =  139 bits (353), Expect = 2e-38
 Identities = 96/318 (30%), Positives = 145/318 (45%), Gaps = 30/318 (9%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVD--NYFTGSKDNLRKWIGHPRFELIRHD 89
           M+ILVTGGAGFIGS+ V  ++     + V+ +D   Y  G+ +NL      PR+  ++ D
Sbjct: 1   MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY-AGNLENLADVEDSPRYRFVQGD 59

Query: 90  VTEPLLIE-------VDQIYHLACPAS---PIFYKYNPVKTIKTNVIGTLNMLGLAKR-- 137
           + +  L++        D + H A  +     I     P   I+TNV+GT  +L  A++  
Sbjct: 60  ICDRELVDRLFKEYQPDAVVHFAAESHVDRSI---DGPAPFIQTNVVGTYTLLEAARKYW 116

Query: 138 VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
              R    ST EVYGD      D+  +    P    S Y   K  ++ L+  Y R +G+ 
Sbjct: 117 GKFRFHHISTDEVYGD---LGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTYGLP 173

Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
             I R  N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    +  +
Sbjct: 174 ATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLV 231

Query: 258 MEGENTGPI-NIGNPGEFTMLELAENVKELINPNVE-----ITMVENTPDDPRQRKPDIT 311
           +     G   NIG   E T LE+ + + EL+  +       IT VE+ P   R+   D +
Sbjct: 232 LTKGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDAS 291

Query: 312 KATELLGWEPKIKLRDGL 329
           K    LGW P+     GL
Sbjct: 292 KIKRELGWRPQETFETGL 309

Length = 340

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score =  138 bits (348), Expect = 1e-37
 Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 50/347 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFEL--I 86
           + I + G  GFIGSHL +KLM    ++V+ +D Y    K  L      W G  +F    I
Sbjct: 15  LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI 74

Query: 87  RHDVTEPLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
           +HD     LI++ D   +LA   +P  Y   P+ TI +N I  L ++        R++  
Sbjct: 75  KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 134

Query: 146 STSEVYGD------PLVHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMF 188
           ST EVYG       P  HP  QD +++    + +P         R  Y   K++ E L++
Sbjct: 135 STCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIY 194

Query: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRGEPLTVQAPGT 239
               ++G+E  I R FN  GPRM+   G         RV++ F    +R EPL +   G 
Sbjct: 195 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQ 254

Query: 240 QTRSFCYVSDMVDGLIRLME--GENTGPI-NIGNP-GEFTMLELAENVKELI-----NPN 290
             R+F Y+ D ++ ++ ++E      G I N+GNP  E T+ +LAE + E+       P 
Sbjct: 255 SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPA 314

Query: 291 VEITMVENTP--------DDPRQRKPDITKATELLGWEPKIKLRDGL 329
           +E   V+ +         DD  +R PD+T   + LGW PK  L D L
Sbjct: 315 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 361

Length = 386

>gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional

 Score =  136 bits (344), Expect = 3e-37
 Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 48/352 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
            ++L+ G  GFIG HL  +++E    EV  +D       D L   + HPR      D+T 
Sbjct: 2   KKVLILGVNGFIGHHLSKRILETTDWEVYGMDM----QTDRLGDLVNHPRMHFFEGDITI 57

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D I  L   A+P  Y   P++  + +    L ++  A + G  ++  S
Sbjct: 58  NKEWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117

Query: 147 TSEVYG---DPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
           TSEVYG   D    P + S   +G +N    R  Y   K++ + +++ Y  + G+   + 
Sbjct: 118 TSEVYGMCPDEEFDP-EASPLVYGPINK--PRWIYACSKQLMDRVIWAYGMEEGLNFTLF 174

Query: 202 RIFNTYGPRMNIDD--------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
           R FN  GP +  D          RVV+ F+   +RGEP+++   G+Q R+F  + D +D 
Sbjct: 175 RPFNWIGPGL--DSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDA 232

Query: 254 LIRLMEGEN---TGPI-NIGNPG-EFTMLELAENVKELINPNVE-------ITMVENTPD 301
           L++++E ++   +G I NIGNP    ++ ELA  + EL     E       + +VE T  
Sbjct: 233 LMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSG 292

Query: 302 --------DPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
                   D + R P I    + LGW PK  + D L  + + +R  +A  R 
Sbjct: 293 AYYGKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVAEARA 344

Length = 347

>gnl|CDD|187563 cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs

 Score =  135 bits (341), Expect = 6e-37
 Identities = 91/333 (27%), Positives = 149/333 (44%), Gaps = 47/333 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN---YFTGS--KDNLRKWIGHPRFELIR 87
           M+ILVTG AGFIG H+  +L+E   +EV+ +DN   Y+     +  L        F+ ++
Sbjct: 1   MKILVTGAAGFIGFHVAKRLLE-RGDEVVGIDNLNDYYDVRLKEARLELLGKSGGFKFVK 59

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA 140
            D+ +   +       E D + HLA  A   +   NP   + +N++G LN+L L +  G 
Sbjct: 60  GDLEDREALRRLFKDHEFDAVIHLAAQAGVRYSLENPHAYVDSNIVGFLNLLELCRHFGV 119

Query: 141 R-ILLTSTSEVYGDPLVHPQDESYWGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           + ++  S+S VYG     P  E     V+ PI   S Y   K+  E +   Y   +GI  
Sbjct: 120 KHLVYASSSSVYGLNTKMPFSED--DRVDHPI---SLYAATKKANELMAHTYSHLYGIPT 174

Query: 199 RIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
              R F  YGP      GR    +  F    + G+P+ V   G  +R F Y+ D+V+G++
Sbjct: 175 TGLRFFTVYGPW-----GRPDMALFLFTKAILEGKPIDVFNDGNMSRDFTYIDDIVEGVV 229

Query: 256 RLM----------EGENTGP---------INIGNPGEFTMLELAENVKELINPNVEITMV 296
           R +          + E   P          NIGN     +++  E +++ +    +   +
Sbjct: 230 RALDTPAKPNPNWDAEAPDPSTSSAPYRVYNIGNNSPVKLMDFIEALEKALGKKAKKNYL 289

Query: 297 ENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
                D  +   DI+K   LLG++PK  L +G+
Sbjct: 290 PMQKGDVPETYADISKLQRLLGYKPKTSLEEGV 322

This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 332

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score =  129 bits (327), Expect = 6e-35
 Identities = 89/326 (27%), Positives = 145/326 (44%), Gaps = 45/326 (13%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++LVTGGAG+IGSH V +L+E    +V+V+DN   G ++ L   I   R E    D+ + 
Sbjct: 1   KVLVTGGAGYIGSHTVVELLE-AGYDVVVLDNLSNGHREAL-PRIEKIRIEFYEGDIRDR 58

Query: 94  LLIE-------VDQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVGA 140
             ++       +D + H A        K        P+K    NV+GTLN+L   +  G 
Sbjct: 59  AALDKVFAEHKIDAVIHFAA------LKAVGESVQKPLKYYDNNVVGTLNLLEAMRAHGV 112

Query: 141 -RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
              + +S++ VYG+P   P  E       P+   + Y   K + E ++ D  +  G+   
Sbjct: 113 KNFVFSSSAAVYGEPETVPITEEA-----PLNPTNPYGRTKLMVEQILRDLAKAPGLNYV 167

Query: 200 IARIFNTYGPRMNID---DGRVVSN---FIAQAIRG--EPLTV------QAPGTQTRSFC 245
           I R FN  G   +     D ++ +N   ++ Q   G  E L +         GT  R + 
Sbjct: 168 ILRYFNPAGAHPSGLIGEDPQIPNNLIPYVLQVALGRREKLAIFGDDYPTPDGTCVRDYI 227

Query: 246 YVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD 301
           +V D+ D     L +L  G  +   N+G    +++LE+ E  +++    +   +      
Sbjct: 228 HVVDLADAHVLALEKLENGGGSEIYNLGTGRGYSVLEVVEAFEKVSGKPIPYEIAPRRAG 287

Query: 302 DPRQRKPDITKATELLGWEPKIKLRD 327
           DP     D +KA E LGW+PK  L D
Sbjct: 288 DPASLVADPSKAREELGWKPKRDLED 313

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score =  127 bits (322), Expect = 2e-34
 Identities = 86/328 (26%), Positives = 129/328 (39%), Gaps = 37/328 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRH 88
           R L+TG  G  GS+L + L+E    EV  +      S       I H      R  L   
Sbjct: 1   RALITGITGQDGSYLAEFLLEK-GYEVHGIV---RRSSSFNTDRIDHLYINKDRITLHYG 56

Query: 89  DVTEPL-LIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVG 139
           D+T+   L         D+IYHLA  +       +P  T + N +GTLN+L   +   + 
Sbjct: 57  DLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDDPEYTAEVNAVGTLNLLEAIRILGLD 116

Query: 140 ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
           AR    S+SE YG     PQ E+      P   RS Y   K  A+ +  +Y   +G+   
Sbjct: 117 ARFYQASSSEEYGKVQELPQSET-----TPFRPRSPYAVSKLYADWITRNYREAYGLFAV 171

Query: 200 IARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDGLIRL 257
             R+FN  GPR       R ++  +A+   G    ++       R +    D V+    L
Sbjct: 172 NGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGNLDAKRDWGDARDYVEAYWLL 231

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP--------D 309
           ++        I      ++ E  E   E      +I  VE    DPR  +P        D
Sbjct: 232 LQQGEPDDYVIATGETHSVREFVELAFEESGLTGDIE-VEI---DPRYFRPTEVDLLLGD 287

Query: 310 ITKATELLGWEPKIKLRDGLPLMEDDFR 337
            +KA E LGW+P++   + +  M D   
Sbjct: 288 PSKAREELGWKPEVSFEELVREMLDADL 315

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score =  123 bits (312), Expect = 1e-32
 Identities = 90/330 (27%), Positives = 145/330 (43%), Gaps = 64/330 (19%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           M++LVTGGAG+IGSH V +L++   +EV+V+DN   G K  L K       +    D+  
Sbjct: 1   MKVLVTGGAGYIGSHTVRQLLKT-GHEVVVLDNLSNGHKIALLKLQF----KFYEGDLLD 55

Query: 92  EPLLIEV------DQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVG 139
             LL  V      D + H A                NP+K    NV+GTLN++    + G
Sbjct: 56  RALLTAVFEENKIDAVVHFAA------SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG 109

Query: 140 AR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
            +  + +ST+ VYG+P   P  E+      P+   + Y   K ++E ++ D  + +  ++
Sbjct: 110 VKKFIFSSTAAVYGEPTTSPISETS-----PLAPINPYGRSKLMSEEILRDAAKANPFKV 164

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE----PLTVQAP----------------- 237
            I R FN  G      DG      + Q   G     P+  +A                  
Sbjct: 165 VILRYFNVAGACP---DGT-----LGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTK 216

Query: 238 -GTQTRSFCYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE 292
            GT  R + +V D+ D     L  L EG +    N+G+   F++LE+ E  K++   ++ 
Sbjct: 217 DGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIP 276

Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPK 322
           + +      DP     D +KA ++LGW+P 
Sbjct: 277 VEIAPRRAGDPAILVADSSKARQILGWQPT 306

Length = 329

>gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE

 Score =  123 bits (311), Expect = 1e-32
 Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 38/327 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR-FELIRHDVTE 92
           +ILVTGGAG+IGSH V +L+E+   EV+++DN   GS++ L            +  D+ +
Sbjct: 1   KILVTGGAGYIGSHTVRQLLESGH-EVVILDNLSNGSREAL-PRGERITPVTFVEGDLRD 58

Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
             L+       ++D + H A   +       P+K  + NV+GTLN+L   ++ G  + + 
Sbjct: 59  RELLDRLFEEHKIDAVIHFAGLIAVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIF 118

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR-QHGIEIRIARI 203
           +S++ VYG+P   P  E       P+G  + Y   K ++E ++ D  +        I R 
Sbjct: 119 SSSAAVYGEPSSIPISEDS-----PLGPINPYGRSKLMSEQILRDLQKADPDWSYVILRY 173

Query: 204 FNTYGPRMNIDDGRVVSN------FIAQAIRG--EPLTV------QAPGTQTRSFCYVSD 249
           FN  G   + D G           +  Q   G  + LT+         GT  R + +V D
Sbjct: 174 FNVAGAHPSGDIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMD 233

Query: 250 MVDGLIRLME----GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ 305
           + D  +  +E    G  +   N+G    F++LE+ E  K++   +  + +    P DP  
Sbjct: 234 LADAHLAALEYLLNGGGSHVYNLGYGQGFSVLEVIEAFKKVSGKDFPVELAPRRPGDPAS 293

Query: 306 RKPDITKATELLGWEPKIKLRDGLPLM 332
              D +K    LGW+PK      L  +
Sbjct: 294 LVADASKIRRELGWQPK---YTDLEEI 317

Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score =  117 bits (295), Expect = 2e-30
 Identities = 82/310 (26%), Positives = 130/310 (41%), Gaps = 32/310 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVTE 92
           +ILVTG  G +GS +V  L       V+     F  SK+ +L              +   
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVV-----FRTSKELDLTDQ-----------EAVR 44

Query: 93  PLLIEV--DQIYHLACPASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGARILLT-STS 148
               +   D + HLA     I      P   ++ N++   N++  A R G + L+   +S
Sbjct: 45  AFFEKEKPDYVIHLAAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSS 104

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF-NTY 207
            +Y D    P DES      P      Y   KR    L   Y +Q+G +  I+ +  N Y
Sbjct: 105 CIYPDLAPQPIDESDLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDY-ISVMPTNLY 163

Query: 208 GPRMNID--DGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
           GP  N D  +  V+   I +        G+ +TV   GT  R F Y  D+   ++ L+E 
Sbjct: 164 GPHDNFDPENSHVIPALIRKFHEAKLRGGKEVTVWGSGTPRREFLYSDDLARAIVFLLEN 223

Query: 261 ENT-GPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGW 319
            +    +N+G+  E ++ ELAE + E++    EI    + PD   ++  D++K    LGW
Sbjct: 224 YDEPIIVNVGSGVEISIRELAEAIAEVVGFKGEIVFDTSKPDGQPRKLLDVSKLRA-LGW 282

Query: 320 EPKIKLRDGL 329
            P   L  G+
Sbjct: 283 FPFTPLEQGI 292

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase

 Score =  115 bits (289), Expect = 3e-29
 Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 22/313 (7%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD---NYFTGSKDNLRKWIGHPRFELI 86
              +RI +TG  GFI SH+  +L   E + +I  D   N          ++      +L 
Sbjct: 19  SEKLRICITGAGGFIASHIARRLKA-EGHYIIASDWKKNEHMSEDMFCHEFH---LVDLR 74

Query: 87  RHDVTEPLLIEVDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
             +    +   VD +++LA     + F + N    +  N + + NML  A+  G  R   
Sbjct: 75  VMENCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFY 134

Query: 145 TSTSEVYG-----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
            S++ +Y      +  V  ++   W    P   +  Y   K   E L   Y +  GIE R
Sbjct: 135 ASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECR 190

Query: 200 IARIFNTYGPRMNIDDGR--VVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIR 256
           I R  N YGP      GR    + F  +A+   +   +   G QTRSF ++ + V+G++R
Sbjct: 191 IGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR 250

Query: 257 LMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATEL 316
           L + +   P+NIG+    +M E+AE      N  + I  +   P+  R R  D T   E 
Sbjct: 251 LTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPG-PEGVRGRNSDNTLIKEK 309

Query: 317 LGWEPKIKLRDGL 329
           LGW P ++L+DGL
Sbjct: 310 LGWAPTMRLKDGL 322

Length = 370

>gnl|CDD|187559 cd05248, ADP_GME_SDR_e, ADP-L-glycero-D-mannoheptose 6-epimerase (GME), extended (e) SDRs

 Score =  112 bits (282), Expect = 1e-28
 Identities = 91/315 (28%), Positives = 138/315 (43%), Gaps = 45/315 (14%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRK-----WIGHPRF-ELIR 87
           I+VTGGAGFIGS+LV  L E    +++VVDN   G K  NL       +I    F + +R
Sbjct: 2   IIVTGGAGFIGSNLVKALNERGITDILVVDNLSNGEKFKNLVGLKIADYIDKDDFKDWVR 61

Query: 88  HDVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
               E   IE   I+H  AC  +      +    +  N   T  +L        R +  S
Sbjct: 62  KG-DENFKIEA--IFHQGACSDTTET---DGKYMMDNNYQYTKELLHYCLEKKIRFIYAS 115

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQHGIE--IRIA-- 201
           ++ VYG+  +   ++    N+ P+ V   Y   K     L+FD + R+HG E   ++   
Sbjct: 116 SAAVYGNGSLGFAEDIETPNLRPLNV---YGYSK-----LLFDQWARRHGKEVLSQVVGL 167

Query: 202 RIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTV------QAPGTQTRSFCYVSDMVD 252
           R FN YGPR     GR   VV +   Q   GE + +       A G Q R F YV D+V 
Sbjct: 168 RYFNVYGPREY-HKGRMASVVFHLFNQIKAGEKVKLFKSSDGYADGEQLRDFVYVKDVVK 226

Query: 253 GLIRLME-GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQR----- 306
             +  +E    +G  N+G     +  +LA    + +   V+I  ++  P+D R +     
Sbjct: 227 VNLFFLENPSVSGIFNVGTGRARSFNDLASATFKALGKEVKIEYIDF-PEDLRGKYQSFT 285

Query: 307 KPDITKATELLGWEP 321
           + DI+K     G+  
Sbjct: 286 EADISKLRA-AGYTK 299

This subgroup contains ADP-L-glycero-D-mannoheptose 6-epimerase, an extended SDR, which catalyzes the NAD-dependent interconversion of ADP-D-glycero-D-mannoheptose and ADP-L-glycero-D-mannoheptose. This subgroup has the canonical active site tetrad and NAD(P)-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 317

>gnl|CDD|236156 PRK08125, PRK08125, bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

 Score =  111 bits (281), Expect = 4e-27
 Identities = 104/353 (29%), Positives = 169/353 (47%), Gaps = 51/353 (14%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+ ++  EV  +D    GS D + +++GHPRF  +  D++  
Sbjct: 317 RVLILGVNGFIGNHLTERLLRDDNYEVYGLD---IGS-DAISRFLGHPRFHFVEGDISIH 372

Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPST 432

Query: 148 SEVYG---DPLVHPQDESYWGN--VNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
           SEVYG   D     +D S   N  V PI   R  Y   K++ + +++ Y  + G+   + 
Sbjct: 433 SEVYGMCTDK-YFDEDTS---NLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLF 488

Query: 202 RIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L 
Sbjct: 489 RPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF 548

Query: 256 RLMEGEN---TGPI-NIGNP-GEFTMLELAENVKELIN---------PNVEITMVENTP- 300
           R++E ++    G I NIGNP  E ++ ELAE +              P     +VE++  
Sbjct: 549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSY 608

Query: 301 -----DDPRQRKPDITKATELLGWEPKIKLRDGLPLMED--DFRLRLAVPRKN 346
                 D   RKP I  A  LL WEPKI +++ +   ++  DF LR     + 
Sbjct: 609 YGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETI---DETLDFFLRTVDLTEK 658

Length = 660

>gnl|CDD|215146 PLN02260, PLN02260, probable rhamnose biosynthetic enzyme

 Score =  108 bits (272), Expect = 4e-26
 Identities = 95/314 (30%), Positives = 149/314 (47%), Gaps = 29/314 (9%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVD--NYFTGSKDNLRKWIGHPRFELIRHDVT 91
           IL+TG AGFI SH+ ++L+ N  + +++V+D  +Y +  K NL      P F+ ++ D+ 
Sbjct: 9   ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK-NLNPSKSSPNFKFVKGDIA 67

Query: 92  EP-----LLI--EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RI 142
                  LLI   +D I H A          N  +  K N+ GT  +L   K  G   R 
Sbjct: 68  SADLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127

Query: 143 LLTSTSEVYG----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           +  ST EVYG    D  V   + S     NP      Y   K  AE L+  Y R +G+ +
Sbjct: 128 IHVSTDEVYGETDEDADVGNHEASQLLPTNP------YSATKAGAEMLVMAYGRSYGLPV 181

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRL 257
              R  N YGP  N    +++  FI  A++G+PL +   G+  RS+ Y  D+ +   + L
Sbjct: 182 ITTRGNNVYGP--NQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVL 239

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKELIN--PNVEITMVENTPDDPRQRKPDITKATE 315
            +GE     NIG   E  ++++A+++ +L    P   I  VEN P + ++   D  K  +
Sbjct: 240 HKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLKK 299

Query: 316 LLGWEPKIKLRDGL 329
            LGW+ +    +GL
Sbjct: 300 -LGWQERTSWEEGL 312

Length = 668

>gnl|CDD|233775 TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase

 Score =  105 bits (263), Expect = 7e-26
 Identities = 79/323 (24%), Positives = 132/323 (40%), Gaps = 48/323 (14%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEP 93
           I+VTGGAGFIGS+LV  L E    +++VVDN   G K  NL          +I   + + 
Sbjct: 1   IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLAD-------LVIADYIDKE 53

Query: 94  LLIE---------VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
             ++         ++ I+H  AC  +    + +    ++ N   +  +L      G   +
Sbjct: 54  DFLDRLEKGAFGKIEAIFHQGACSDT---TETDGEYMMENNYQYSKRLLDWCAEKGIPFI 110

Query: 144 LTSTSEVYGD-PLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIA 201
             S++  YGD      +       +N  G  +  +D+   V   ++ +      + +   
Sbjct: 111 YASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQ--YVRRRVLPEALSAQVVGL--- 165

Query: 202 RIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQ--------APGTQTRSFCYVSDM 250
           R FN YGPR     G+   V  +   Q   G    V+          G Q R F YV D+
Sbjct: 166 RYFNVYGPREY-HKGKMASVAFHLFNQIKAGG--NVKLFKSSEGFKDGEQLRDFVYVKDV 222

Query: 251 VDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQR---- 306
           VD  + L+E   +G  N+G     +  +LA+ V + +  + +I  +   P+  R R    
Sbjct: 223 VDVNLWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPM-PEALRGRYQYF 281

Query: 307 -KPDITKATELLGWEPKIKLRDG 328
            + DITK      + P   L +G
Sbjct: 282 TQADITKLRAAGYYGPFTTLEEG 304

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 314

>gnl|CDD|182313 PRK10217, PRK10217, dTDP-glucose 4,6-dehydratase; Provisional

 Score =  103 bits (257), Expect = 6e-25
 Identities = 92/327 (28%), Positives = 139/327 (42%), Gaps = 36/327 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           +IL+TGGAGFIGS LV  ++    + V+VVD   + G+  +L       RF   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA---------- 135
              +         D + HLA  +        P   I+TN++GT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122

Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           K+   R    ST EVYGD  +H  D+ ++    P    S Y   K  ++ L+  + R +G
Sbjct: 123 KKSAFRFHHISTDEVYGD--LHSTDD-FFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179

Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           +   I    N YGP    +  +++   I  A+ G+PL V   G Q R + YV D    L 
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALY 237

Query: 256 RLMEGENTGPI-NIGNPGEFTMLELAENVKELIN---PNVE---------ITMVENTPDD 302
            +      G   NIG   E   L++ E + EL+    PN           IT V + P  
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGH 297

Query: 303 PRQRKPDITKATELLGWEPKIKLRDGL 329
             +   D +K    LGW P+     G+
Sbjct: 298 DLRYAIDASKIARELGWLPQETFESGM 324

Length = 355

>gnl|CDD|236649 PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional

 Score = 98.3 bits (245), Expect = 3e-23
 Identities = 91/332 (27%), Positives = 149/332 (44%), Gaps = 40/332 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+ILVTGGAGFIGS +V  ++ N ++ V+ VD   + G+ ++L       R+     D+ 
Sbjct: 1   MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADIC 60

Query: 92  EPLLIEVDQIY---------HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA------- 135
           +    E+D+I+         HLA  +        P   I+TN++GT  +L  A       
Sbjct: 61  D--RAELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSAL 118

Query: 136 ---KRVGARILLTSTSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETL 186
              K+   R    ST EVYGD L HP +         +         S Y   K  ++ L
Sbjct: 119 DEDKKNAFRFHHISTDEVYGD-LPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHL 177

Query: 187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY 246
           +  + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + Y
Sbjct: 178 VRAWLRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLY 235

Query: 247 VSDMVDGLIRLM-EGENTGPINIGNPGEFTMLELAENVKELINPNV--------EITMVE 297
           V D    L +++ EG+     NIG   E   L++   + +L++  V        +IT V 
Sbjct: 236 VEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVA 295

Query: 298 NTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           + P   R+   D +K +  LGW+P+     G+
Sbjct: 296 DRPGHDRRYAIDASKISRELGWKPQETFESGI 327

Length = 352

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 90.6 bits (225), Expect = 1e-20
 Identities = 87/321 (27%), Positives = 145/321 (45%), Gaps = 57/321 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M++L+TGGAG IGSHL++ L+E   ++V+V+DN+ TG +++L     HP   ++   + +
Sbjct: 1   MKVLITGGAGQIGSHLIEHLLER-GHQVVVIDNFATGRREHLPD---HPNLTVVEGSIAD 56

Query: 93  PLLIEV-------DQIYHLACPASPIFYKYNP---VKTIKTNVIGTLNMLGLAKRVGA-R 141
             L++        D + H A  A+   YK +P    +   TNV+G  N++  AK+ G  R
Sbjct: 57  KALVDKLFGDFKPDAVVHTA--AA---YK-DPDDWYEDTLTNVVGGANVVQAAKKAGVKR 110

Query: 142 ILLTSTSEVYGDP-------LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           ++   T+  YG         L HP          P G  S Y   K   E     Y    
Sbjct: 111 LIYFQTALCYGLKPMQQPIRLDHP--------RAPPG--SSYAISKTAGE----YYLELS 156

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDG 253
           G++    R+ N  GPR  I     +  F  +   G+   V    T T R F +V D+   
Sbjct: 157 GVDFVTFRLANVTGPRNVIGP---LPTFYQRLKAGKKCFV----TDTRRDFVFVKDLARV 209

Query: 254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELIN----PNVEITMVENTPDDPRQRKP 308
           + + ++G    G  +  +  + ++ EL + V E ++    P VE+  VE  PDD      
Sbjct: 210 VDKALDGIRGHGAYHFSSGEDVSIKELFDAVVEALDLPLRPEVEV--VELGPDDVPSILL 267

Query: 309 DITKATELLGWEPKIKLRDGL 329
           D ++  +  GW+    L + +
Sbjct: 268 DPSRTFQDFGWKEFTPLSETV 288

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 94/337 (27%), Positives = 139/337 (41%), Gaps = 51/337 (15%)

Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYF-TGSKDNL-RKWIG 79
           F+Q   R+LVTG  GF GS L   L E          +     N F   + DN      G
Sbjct: 1   FWQ-GKRVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTNPNLFELANLDNKISSTRG 59

Query: 80  HPR-FELIRHDVTEPLLIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLA 135
             R    +R  + E    E + ++HLA  A P+    YK +PV+T +TNV+GT+N+L   
Sbjct: 60  DIRDLNALREAIRE---YEPEIVFHLA--AQPLVRLSYK-DPVETFETNVMGTVNLLEAI 113

Query: 136 KRVG-ARILLTSTSE-VYGDPLVHPQDESYWGNV--NPIGVRSCYDEGKRVAETLMFDYH 191
           +  G  + ++  TS+  Y +       E  WG    +P+G    Y   K  AE ++  Y 
Sbjct: 114 RETGSVKAVVNVTSDKCYEN------KEWGWGYRENDPLGGHDPYSSSKGCAELIISSYR 167

Query: 192 R---------QHGIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
                     +HGI I  AR  N   G     D  R+V + I     GE + ++ P    
Sbjct: 168 NSFFNPENYGKHGIAIASARAGNVIGGGDWAED--RIVPDCIRAFEAGERVIIRNPNA-I 224

Query: 242 RSFCYVSDMVDGLIRLME------GENTGPINIGNPGE--FTMLELAENVKEL-INPNVE 292
           R + +V + + G + L E       E     N G   E   T+LEL E +          
Sbjct: 225 RPWQHVLEPLSGYLLLAEKLYERGEEYAEAWNFGPDDEDAVTVLELVEAMARYWGEDARW 284

Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
                + P +    K D +KA  +LGW P+  L + L
Sbjct: 285 DLDGNSHPHEANLLKLDCSKAKTMLGWRPRWNLEETL 321

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs

 Score = 87.7 bits (218), Expect = 9e-20
 Identities = 78/275 (28%), Positives = 113/275 (41%), Gaps = 50/275 (18%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---KDNLRKWIGHPRFELIR 87
               ILVTGGAG IGS LV ++++    ++IV D            LR    H +   I 
Sbjct: 1   KGKTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFII 60

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGL 134
            DV +   +         D ++H A        K       NP + IKTNV+GT N++  
Sbjct: 61  GDVRDKERLRRAFKERGPDIVFHAAA------LKHVPSMEDNPEEAIKTNVLGTKNVIDA 114

Query: 135 AKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           A   G  + +  ST            D++    VNP+ V       KRVAE L+   +  
Sbjct: 115 AIENGVEKFVCIST------------DKA----VNPVNV---MGATKRVAEKLLLAKNEY 155

Query: 194 HG-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
               +    R  N  G R     G V+  F  Q  +G PLTV  P   TR F  + + VD
Sbjct: 156 SSSTKFSTVRFGNVLGSR-----GSVLPLFKKQIKKGGPLTVTDPDM-TRFFMTIPEAVD 209

Query: 253 GLIRLME-GENTGPINIGNPGEFTMLELAENVKEL 286
            +++    G+  G   +       +L+LAE + EL
Sbjct: 210 LVLQACILGDGGGIFLLDMGPPVKILDLAEALIEL 244

UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 68/270 (25%), Positives = 109/270 (40%), Gaps = 46/270 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ILVTG  GF+GS+LV  L+    +   +V      GS   L         E++  D+T+ 
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRS----GSDAVLLD---GLPVEVVEGDLTDA 53

Query: 94  LLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             +       D+++HLA   S  + K    +  +TNV GT N+L  A   G  R++ TS+
Sbjct: 54  ASLAAAMKGCDRVFHLAAFTSL-WAKDRK-ELYRTNVEGTRNVLDAALEAGVRRVVHTSS 111

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI---ARIF 204
               G P     DE+     N     + Y   K +AE  + +   + G+++ I   + +F
Sbjct: 112 IAALGGPPDGRIDET--TPWNERPFPNDYYRSKLLAELEVLEAAAE-GLDVVIVNPSAVF 168

Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
                      G  V +++   +   P     PG    SF  V D+ +G I  ME     
Sbjct: 169 GPGDEGPTS-TGLDVLDYLNGKLPAYP-----PGGT--SFVDVRDVAEGHIAAMEK---- 216

Query: 265 PINIGNPGE--------FTMLELAENVKEL 286
               G  GE         +  +L E + E+
Sbjct: 217 ----GRRGERYILGGENLSFKQLFETLAEI 242

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

 Score = 83.5 bits (207), Expect = 2e-18
 Identities = 73/321 (22%), Positives = 118/321 (36%), Gaps = 60/321 (18%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+IL+TG  G +G+ L   L      EVI  D                   ++   D   
Sbjct: 1   MKILITGANGQLGTELRRALPGEF--EVIATD---------------RAELDITDPDAVL 43

Query: 93  PLLIEV--DQIYHLACPASPIFYK--YNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
            ++ E   D + + A  A     K    P      N  G  N+   A  VGAR++  ST 
Sbjct: 44  EVIRETRPDVVINAA--AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTD 101

Query: 149 EVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
            V+           D       NP+ V   Y   K   E  +     +H I +R + ++ 
Sbjct: 102 YVFDGEKGGPYKETDT-----PNPLNV---YGRSKLAGEEAVRAAGPRHLI-LRTSWVYG 152

Query: 206 TYGPRMNIDDGRVVSNFIAQAIR----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
            YG           +NF+   +R    G+ L V     Q  S  Y  D+ D ++ L+E E
Sbjct: 153 EYG-----------NNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKE 199

Query: 262 NTGPI-NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ-RKP-----DITKAT 314
             G + ++ N GE +  E A+ + E    + E+     + + P   ++P     D  K  
Sbjct: 200 KEGGVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLE 259

Query: 315 ELLGWEPKIKLRDGLPLMEDD 335
           +  G       R+ L  + D+
Sbjct: 260 KAFGLSLPE-WREALKALLDE 279

Length = 281

>gnl|CDD|185103 PRK15181, PRK15181, Vi polysaccharide biosynthesis protein TviC; Provisional

 Score = 82.1 bits (202), Expect = 1e-17
 Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 36/331 (10%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RK 76
           +K   +  R L+TG AGFIGS L+++L+   +  VI +DN+ TG + NL          +
Sbjct: 9   TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQT-VIGLDNFSTGYQHNLDDVRTSVSEEQ 67

Query: 77  WIGHPRFELIRHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM 131
           W    RF  I+ D+      +     VD + H A   S      +P+ T   N+ G LNM
Sbjct: 68  W---SRFIFIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNM 124

Query: 132 LGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
           L  A+    +     ++S  YGD    P+ E   G   P+   S Y   K V E     +
Sbjct: 125 LTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGR--PL---SPYAVTKYVNELYADVF 179

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            R +       R FN +G R N +     V+  +I   ++ EP+ +   G+ +R FCY+ 
Sbjct: 180 ARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIE 239

Query: 249 DMVDG-LIRLMEGENTGPINIGN--PGEFTML-ELAENVKELIN------PNVEITMVEN 298
           +++   L+     +      + N   G+ T L EL   +++ +N         E    + 
Sbjct: 240 NVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDF 299

Query: 299 TPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
              D +  + DITK    L +EP+  +++GL
Sbjct: 300 RDGDVKHSQADITKIKTFLSYEPEFDIKEGL 330

Length = 348

>gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 83.1 bits (206), Expect = 2e-17
 Identities = 76/299 (25%), Positives = 116/299 (38%), Gaps = 65/299 (21%)

Query: 15  KPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN--------- 65
           +PP                 +LVTGG G IGS L  ++++    E+I+            
Sbjct: 234 RPPVALDTELIGAMLT-GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLID 292

Query: 66  -YFTGSKDNLRKW--IGHPR-FELIRHDVTEPLLIEVDQIYHLACPASPIFYK------Y 115
                    L+    IG  R  + +   +      +VD ++H A        K      Y
Sbjct: 293 MELREKFPELKLRFYIGDVRDRDRVERAMEG---HKVDIVFHAAA------LKHVPLVEY 343

Query: 116 NPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS 174
           NP + IKTNV+GT N+   A + G  + +L ST +                 VNP  V  
Sbjct: 344 NPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA----------------VNPTNV-- 385

Query: 175 CYDEGKRVAETLMFDYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP 231
                KR+AE L    +R          + R  N  G R     G V+  F  Q   G P
Sbjct: 386 -MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGP 439

Query: 232 LTVQAPGTQTRSFCYVSDMVDGLIR---LMEGENTGPINIGNPGE-FTMLELAENVKEL 286
           LTV  P   TR F  + + V  +++   + +G   G I + + GE   +++LA+ + EL
Sbjct: 440 LTVTDP-DMTRFFMTIPEAVQLVLQAGAIAKG---GEIFVLDMGEPVKIIDLAKAMIEL 494

Length = 588

>gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 80/314 (25%), Positives = 120/314 (38%), Gaps = 44/314 (14%)

Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL 95
            V G  G +GS +V KL              FT         +     EL   D+T    
Sbjct: 1   FVAGHRGLVGSAIVRKLEALG----------FT-------NLVLRTHKEL---DLTRQ-- 38

Query: 96  IEVDQIY---------HLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
            +V+  +           A     I     Y P   I+ N+    N++  A R G + LL
Sbjct: 39  ADVEAFFAKEKPTYVILAAAKVGGIHANMTY-PADFIRENLQIQTNVIDAAYRHGVKKLL 97

Query: 145 T-STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
              +S +Y      P  E+      P      Y   K     +   Y  Q+G +      
Sbjct: 98  FLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMP 157

Query: 204 FNTYGPRMN--IDDGRVVSNFIAQ----AIRGEPLTVQ-APGTQTRSFCYVSDMVDGLIR 256
            N YGP  N   ++  V+   I +       G P  V    G+  R F +V D+ D ++ 
Sbjct: 158 TNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVF 217

Query: 257 LMEG-ENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATE 315
           LM        +N+G+  E T+ ELAE VKE++    E+    + PD   ++  D +K   
Sbjct: 218 LMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLRS 277

Query: 316 LLGWEPKIKLRDGL 329
           L GW+PK  L+DGL
Sbjct: 278 L-GWDPKFSLKDGL 290

Length = 306

>gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs

 Score = 77.8 bits (192), Expect = 1e-16
 Identities = 74/275 (26%), Positives = 111/275 (40%), Gaps = 64/275 (23%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+IL+TG  GFIG +L+ +L E + +++   D                   EL      +
Sbjct: 1   MKILITGAKGFIGKNLIARLKEQKDDDIFFYD-------------RESDESEL------D 41

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEV 150
             L   D I+HLA    P     +  +    NV  T  +L    R G +  ILL+S+ + 
Sbjct: 42  DFLQGADFIFHLAGVNRP----KDEAEFESGNVGLTERLLDALTRNGKKPPILLSSSIQA 97

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG-- 208
             D              NP      Y + K  AE L+ +Y R+ G  + I R+ N +G  
Sbjct: 98  ALD--------------NP------YGKSKLAAEELLQEYARETGAPVYIYRLPNVFGKW 137

Query: 209 --PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
             P  N      V+ F     R  P+ +  P     +  Y+ D+VD LI+L+EG  T   
Sbjct: 138 CRPNYN----SAVATFCYNIARDLPIQINDPAA-ELTLVYIDDVVDELIQLLEGAPTYSG 192

Query: 267 NIGN--PG-EFTMLELA-------ENVKELINPNV 291
                 P  + T+ E+A       E+   LI PNV
Sbjct: 193 GFDQVLPVYKVTVGEIAELLYKFKESRDTLILPNV 227

This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 77.3 bits (191), Expect = 8e-16
 Identities = 88/331 (26%), Positives = 140/331 (42%), Gaps = 55/331 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSKDNLRKWIGHPRFELIRHDV 90
            ILVTGGAG+IGSH V +L+     +V+V+DN       +   +++  G     L+ H V
Sbjct: 7   TILVTGGAGYIGSHTVLQLLL-AGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKV 65

Query: 91  T-------EPLLIE--VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
                   E +      D + H A         A P+ Y  N       N++GT+N+L +
Sbjct: 66  DLRDKEALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDN-------NLVGTINLLEV 118

Query: 135 AKRVGARILLTSTS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR- 192
             + G + L+ S+S  VYG P   P  E +     P+   + Y   K   E +  D H  
Sbjct: 119 MAKHGCKKLVFSSSATVYGQPEEVPCTEEF-----PLSATNPYGRTKLFIEEICRDIHAS 173

Query: 193 QHGIEIRIARIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV------QAP 237
               +I + R FN  G  P   I +D + + N    ++ Q A+ R   LTV         
Sbjct: 174 DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKD 233

Query: 238 GTQTRSFCYVSDMVDG----LIRLMEGENTG--PINIGNPGEFTMLELAENVKELINPNV 291
           GT  R + +V D+ DG    L +L    + G    N+G     ++LE+    ++     +
Sbjct: 234 GTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI 293

Query: 292 EITMVENTPDDPRQRKPDITKATELLGWEPK 322
            + +    P D  +      KA + LGW+ K
Sbjct: 294 PLKLAPRRPGDAEEVYASTEKAEKELGWKAK 324

Length = 352

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 75.4 bits (186), Expect = 9e-16
 Identities = 63/286 (22%), Positives = 93/286 (32%), Gaps = 61/286 (21%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-----------------EKNEVIVVDNYFTGSKDNLR 75
           M+IL+ GG  FIG  LV++L+                   E  E IV D      +D L 
Sbjct: 1   MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPDLPEGVEHIVGDRN---DRDALE 57

Query: 76  KWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA 135
           + +G   F+++           VD I             Y P +            L   
Sbjct: 58  ELLGGEDFDVV-----------VDTI------------AYTPRQV--------ERALDAF 86

Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           K    + +  S++ VY  P     + +         +     Y  GKR AE ++ +    
Sbjct: 87  KGRVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAA-- 144

Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG 253
                 I R    YGP          + F  +  RG P+ V   G     F +V D+   
Sbjct: 145 -AFPYTIVRPPYIYGPGDYTGRL---AYFFDRLARGRPILVPGDGHSLVQFIHVKDLARA 200

Query: 254 LIRLMEGE--NTGPINIGNPGEFTMLELAENVKELINPNVEITMVE 297
           L+          G  NI      T  EL E   + +    EI  VE
Sbjct: 201 LLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKALGKEAEIVHVE 246

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|224014 COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 47/346 (13%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEV--IVVDNY-FTGSKDNLRK--WIGHPRFELIRH 88
             L+TG  G  GS+L  +L+  +  EV  I   +  F   + +L +   +  PR  L   
Sbjct: 4   VALITGITGQDGSYLA-ELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYG 62

Query: 89  DVTEP-----LLIEV--DQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
           D+T+      +L EV  D+IY+LA  +   + ++  P  T   + IGTL +L   + +G 
Sbjct: 63  DLTDSSNLLRILEEVQPDEIYNLAAQSHVGVSFE-QPEYTADVDAIGTLRLLEAIRILGE 121

Query: 140 --ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
              R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+ 
Sbjct: 122 KKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGLF 176

Query: 198 IRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDGLI 255
                +FN   P        R ++  +A+   G    +        R + +  D V+ + 
Sbjct: 177 ACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMW 236

Query: 256 RLMEGENTGPINIGNPGEFTMLELAENVKELINPNV--------EITMVENTPD-----D 302
            +++ E      I      ++ E  E   E++  ++        E  +   T       D
Sbjct: 237 LMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEID 296

Query: 303 PRQRKP--------DITKATELLGWEPKIKLRDGLPLM-EDDFRLR 339
           PR  +P        D TKA E LGW P++ L + +  M E D    
Sbjct: 297 PRYFRPAEVDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEAA 342

Length = 345

>gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein

 Score = 73.7 bits (182), Expect = 5e-15
 Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 62/279 (22%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRKWIGHPRFELIRHDVT 91
           +LVTGG G IGS L  ++++    ++I+         +    LR+    P+      DV 
Sbjct: 1   VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60

Query: 92  EPLLIE-------VDQIYHLACPASPIFYK------YNPVKTIKTNVIGTLNMLGLAKRV 138
           +   +E       VD ++H A        K      YNP++ IKTNV+GT N+   A   
Sbjct: 61  DRERLERAMEQHGVDTVFHAAA------LKHVPLVEYNPMEAIKTNVLGTENVAEAAIEN 114

Query: 139 GA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF---DYHRQH 194
           G  + +L ST            D++    VNP  V       KR+AE L           
Sbjct: 115 GVEKFVLIST------------DKA----VNPTNV---MGATKRLAEKLFQAANRESGSG 155

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
                + R  N  G R     G V+  F  Q   G P+TV  P   TR F  + + V  +
Sbjct: 156 KTRFSVVRFGNVLGSR-----GSVIPLFKKQIANGGPVTVTHP-DMTRFFMTIPEAVQLV 209

Query: 255 IR---LMEGENTGPI---NIGNPGEFTMLELAENVKELI 287
           ++   + +G   G I   ++G P    +++LA+ +   I
Sbjct: 210 LQAGAMGKG---GEIFVLDMGPP--VKIVDLAKAMIGDI 243

This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 62/232 (26%), Positives = 94/232 (40%), Gaps = 26/232 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            +LVTGG+GF G  LV +L+E     V   D    G    L  W  HP  E ++ D+T+ 
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEA--LSAW-QHPNIEFLKGDITDR 57

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTI-KTNVIGTLNMLGLAKRVGARILL-TS 146
             +E      D ++H A           P     + NV GT N+L   +R G +  + TS
Sbjct: 58  NDVEQALSGADCVFHTAAIVPL----AGPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTS 113

Query: 147 TSEV-YGDPLVHPQDESYWGNVNPIGVRS--CYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           +S V +G   +H  DE+      P        Y E K +AE ++ + + +  +     R 
Sbjct: 114 SSSVIFGGQNIHNGDETL-----PYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRP 168

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
              +GP     D  +V      A +G    V   G     F YV ++    I
Sbjct: 169 AGIFGPG----DQGLVPILFEWAEKGLVKFVFGRGNNLVDFTYVHNLAHAHI 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 53/264 (20%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIR 87
           MR+LVTGG+G+IGSH   +L++N  ++V+++DN    SK ++   I       P F  + 
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVVILDN-LCNSKRSVLPVIERLGGKHPTF--VE 56

Query: 88  HDV-TEPLLIE------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLG 133
            D+  E LL E      +D + H A           P+ Y  N       NV GTL ++ 
Sbjct: 57  GDIRNEALLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLIS 109

Query: 134 LAKRVGAR-ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYH 191
             +    + ++ +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  
Sbjct: 110 AMRAANVKNLIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQ 164

Query: 192 R-QHGIEIRIARIFNTYGPR----MNIDDGRVVSN---FIAQAI--RGEPLTV------Q 235
           + Q    I + R FN  G      M  D   + +N   +IAQ    R + L +       
Sbjct: 165 KAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT 224

Query: 236 APGTQTRSFCYVSDMVDGLIRLME 259
             GT  R + +V D+ DG +  ME
Sbjct: 225 EDGTGVRDYIHVMDLADGHVAAME 248

Length = 338

>gnl|CDD|187565 cd05255, SQD1_like_SDR_e, UDP_sulfoquinovose_synthase (Arabidopsis thaliana SQD1 and related proteins), extended (e) SDRs

 Score = 69.7 bits (171), Expect = 3e-13
 Identities = 84/348 (24%), Positives = 116/348 (33%), Gaps = 92/348 (26%)

Query: 33  MRILVTGGAGFIG----SHLVDKLMENEKNEVIVVDNYFTGSKDN--------------- 73
           M++L+ GG G+ G     HL  +      +EV +VDN      D                
Sbjct: 1   MKVLILGGDGYCGWPTALHLSKR-----GHEVCIVDNLVRRRIDVELGLESLTPIASIHE 55

Query: 74  -LRKW---IGHPRFELIRHDVTEPLL-------IEVDQIYHLA----CPASPIFYKYNPV 118
            LR W    G    E    D  +           E D + H A     P S I  + +  
Sbjct: 56  RLRAWKELTGK-TIEFYVGDACDYEFLAELLASHEPDAVVHFAEQRSAPYSMI-DREHAN 113

Query: 119 KTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN-------- 168
            T   NVIGTLN+L   K       ++   T   YG P +    E Y    +        
Sbjct: 114 YTQHNNVIGTLNLLFAIKEFDPDCHLVKLGTMGEYGTPNI-DIPEGYITIEHNGRRDTLP 172

Query: 169 -PIGVRSCYDEGKRVAETLMFDYHRQHGIEI---RIARIFNTYGPRMNIDD--------- 215
            P    S Y   K      +    +  GI I       ++ T       D+         
Sbjct: 173 YPKQAGSWYHLSKVHDSHNIMFACKAWGIRITDLNQGVVYGTKTEETEADERLINRFDYD 232

Query: 216 ---GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPG 272
              G V++ F  QA  G PLTV   G QTR F  + D V  L   +E       N    G
Sbjct: 233 GVFGTVLNRFCVQAAIGHPLTVYGKGGQTRGFISIRDTVQCLELALE-------NPAKAG 285

Query: 273 EFTML----------ELAENVKEL---INPNVEITMVENTPDDPRQRK 307
           E+ +           ELAE V E    +  +V++  + N    PR   
Sbjct: 286 EYRVFNQFTEQFSVGELAEMVAEAGSKLGLDVKVEHLPN----PRVEA 329

Arabidopsis thaliana UDP-sulfoquinovose-synthase ( SQD1), an extended SDR, catalyzes the transfer of SO(3)(-) to UDP-glucose in the biosynthesis of plant sulfolipids. Members of this subgroup share the conserved SDR catalytic residues, and a partial match to the characteristic extended-SDR NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 382

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 68.2 bits (167), Expect = 5e-13
 Identities = 81/325 (24%), Positives = 134/325 (41%), Gaps = 48/325 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M++L+TG +GF+G  L ++L+ +  NE +++ +  +    +     G PR   I  D+  
Sbjct: 1   MKVLITGASGFVGQRLAERLLSDVPNERLILIDVVSPKAPS-----GAPRVTQIAGDLAV 55

Query: 93  PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
           P LIE       D ++HLA   S      +     + NV GT N+L   ++ G   R + 
Sbjct: 56  PALIEALANGRPDVVFHLAAIVSGGAEA-DFDLGYRVNVDGTRNLLEALRKNGPKPRFVF 114

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TS+  VYG PL +P  +     ++P    S Y   K + E L+ DY R+  ++ R  R+ 
Sbjct: 115 TSSLAVYGLPLPNPVTDHT--ALDPA---SSYGAQKAMCELLLNDYSRRGFVDGRTLRL- 168

Query: 205 NTYGPRMNIDDGRVVSNFIAQA-----IRGEPLTVQAPGTQ-TRSFCYV-SDMVDGLIRL 257
               P + +  GR   N  A A     IR EPL  +  G        Y    +   +   
Sbjct: 169 ----PTVCVRPGR--PNKAASAFASTIIR-EPLVGEEAGLPVAEQLRYWLKSVATAVANF 221

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT------MVENTPDDPRQRKP--- 308
           +          G   + T+  L+  V E +   + +       ++   PD+  +R     
Sbjct: 222 VHAAELPAEKFGPRRDLTLPGLSVTVGEELRALIPVAGLPALMLITFEPDEEIKRIVFGW 281

Query: 309 ----DITKATELLGWEPKIKLRDGL 329
               D T+A   LG+     L  GL
Sbjct: 282 PTRFDATRAQS-LGFVADSSLAAGL 305

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 75/309 (24%), Positives = 123/309 (39%), Gaps = 32/309 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHD 89
            +LVTG  GFI SH+V++L++        V +        L+  +       R E +  D
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRS--LSKSAKLKALLKAAGYNDRLEFVIVD 58

Query: 90  VT------EPLLIEVDQIYHLACPASPIFYKYNPVKT--IKTNVIGTLNMLGLAKRVGA- 140
                   +  L  VD + H+   ASP  +     +   I   V GTLN+L  AK  G+ 
Sbjct: 59  DLTAPNAWDEALKGVDYVIHV---ASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSV 115

Query: 141 -RILLTSTSEVYGDPLVHPQ----DESYWGNVNPIGVRS--CYDEGKRVAETLMFDYHRQ 193
            R++LTS+    GDP          E  W ++          Y   K +AE   +++ ++
Sbjct: 116 KRVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWEFVKE 175

Query: 194 HGIEIRIARIFNTY--GPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDM 250
           +  +  +  I   Y  GP +  D+    +  I + + G+ P            +  V D+
Sbjct: 176 NKPKFELITINPGYVLGPSLLADELNSSNELINKLLDGKLPAIPPNLPF---GYVDVRDV 232

Query: 251 VDGLIRLME-GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
            D  +R +E  E  G   I + G F+  E+A+ ++E            N        K D
Sbjct: 233 ADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFPAPNPLMLSILVKFD 292

Query: 310 ITKATELLG 318
             K+ ELLG
Sbjct: 293 NRKSEELLG 301

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|233954 TIGR02622, CDP_4_6_dhtase, CDP-glucose 4,6-dehydratase

 Score = 67.7 bits (166), Expect = 1e-12
 Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 50/329 (15%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFT--GSKDNLRKWIGH 80
           F    ++LVTG  GF GS L   L+E          +     N F        +    G 
Sbjct: 1   FWQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGD 60

Query: 81  PR-FELIRHDVTEPLLIEVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK 136
            R    +R  + E    + + ++HLA  A P+    Y   P++T +TNV+GT+N+L   +
Sbjct: 61  IRDAAKLRKAIAE---FKPEIVFHLA--AQPLVRKSYAD-PLETFETNVMGTVNLLEAIR 114

Query: 137 RVG---ARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFDYH 191
            +G   A + +T + + Y +      DE  WG    +P+G    Y   K  AE ++  Y 
Sbjct: 115 AIGSVKAVVNVT-SDKCYRN------DEWVWGYRETDPLGGHDPYSSSKACAELVIASYR 167

Query: 192 R-------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
                    HGI+I  AR  N  G     +D R++ + I      + + ++ P   TR +
Sbjct: 168 SSFFGVANFHGIKIASARAGNVIGGGDWAED-RLIPDVIRAFSSNKIVIIRNP-DATRPW 225

Query: 245 CYVSDMVDGLIRLMEGENTGPINIGNPGEF-TMLELAENVKELINPNVEITMV------- 296
            +V + + G + L E   TG         F         V EL+   +E           
Sbjct: 226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWED 285

Query: 297 ---ENTPDDPRQRKPDITKATELLGWEPK 322
               N P + R  K D +KA  LLGW P+
Sbjct: 286 DSDLNHPHEARLLKLDSSKARTLLGWHPR 314

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 349

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 66.6 bits (163), Expect = 2e-12
 Identities = 62/260 (23%), Positives = 98/260 (37%), Gaps = 37/260 (14%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP 93
           ILVTG AG +G  L  +L  +    VI VD        + R+  G  P+ E +R D+ +P
Sbjct: 1   ILVTGAAGGLGRLLARRLAAS--PRVIGVD------GLDRRRPPGSPPKVEYVRLDIRDP 52

Query: 94  LLI------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
                    E D + HLA    P     +  +  + NV GT N+L      G  R+++TS
Sbjct: 53  AAADVFREREADAVVHLAFILDPP---RDGAERHRINVDGTQNVLDACAAAGVPRVVVTS 109

Query: 147 TSEVYG----DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIA 201
           +  VYG    +P    +D    G+         Y   K   E L+ ++ R+H  + + + 
Sbjct: 110 SVAVYGAHPDNPAPLTEDAPLRGS-----PEFAYSRDKAEVEQLLAEFRRRHPELNVTVL 164

Query: 202 RIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           R     GP           N     +    L V         F +  D+   L+  +   
Sbjct: 165 RPATILGPGT--------RNTTRDFLSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAG 216

Query: 262 NTGPINIGNPGEFTMLELAE 281
            TG  N+   G   +  +  
Sbjct: 217 ATGIFNVAGDGPVPLSLVLA 236

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 81/329 (24%), Positives = 117/329 (35%), Gaps = 60/329 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++LVTG  GFIG  LVDKL+   +   I V N                  EL   D    
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRN-------AENAEPSVVLAELPDIDSFTD 53

Query: 94  LLIEVDQIYHLAC------PASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILL 144
           L + VD + HLA                Y  V     N   T  +   A R G +  + L
Sbjct: 54  LFLGVDAVVHLAARVHVMNDQGADPLSDYRKV-----NTELTRRLARAAARQGVKRFVFL 108

Query: 145 TSTSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
            S+ +V G+  V  P DE+      P   +  Y   K  AE  + +     G+E+ I R 
Sbjct: 109 -SSVKVNGEGTVGAPFDET--DPPAP---QDAYGRSKLEAERALLELGASDGMEVVILRP 162

Query: 204 FNTYGPRMNIDDGRVVSNF--IAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
              YGP +         NF  + + I RG PL   A   + RS   + ++VD +   +  
Sbjct: 163 PMVYGPGVR-------GNFARLMRLIDRGLPLPPGAVKNR-RSLVSLDNLVDAIYLCI-- 212

Query: 261 ENTGPIN----IGNPGEFTMLELAENVKE--------LINPNVEITMVENTPDDPR--QR 306
                 N    + +    +  EL + ++         L  P   +             QR
Sbjct: 213 SLPKAANGTFLVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLRFAAKLLGKRAVIQR 272

Query: 307 -----KPDITKATELLGWEPKIKLRDGLP 330
                + D  K    LGW P I L +GL 
Sbjct: 273 LFGSLQYDPEKTQNELGWRPPISLEEGLQ 301

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase

 Score = 63.5 bits (154), Expect = 3e-11
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 29/262 (11%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           +L+TGG G  G+ ++ + ++ +  E+ +        +D++RK   + + +    DV +  
Sbjct: 7   LLITGGTGSFGNAVLRRFLDTDIKEIRIFSRD-EKKQDDMRKKYNNSKLKFYIGDVRDYR 65

Query: 95  LI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
            I      VD IYH A        +++P++ +KTNV+GT N+L  A   G  R++  ST 
Sbjct: 66  SILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVVCLST- 124

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
               D  V+P        +N +G+     E   VA++   D  +     I   R  N   
Sbjct: 125 ----DKAVYP--------INAMGISKAMMEKVMVAKSRNVDSSKT---VICGTRYGNVMA 169

Query: 209 PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINI 268
            R     G V+  F+     G+PLT+  P   TR    + D VD ++   E  N G I +
Sbjct: 170 SR-----GSVIPLFVDLIKAGKPLTITDP-NMTRFMMTLEDAVDLVLYAFEHGNNGDIFV 223

Query: 269 GNPGEFTMLELAENVKELINPN 290
                 T+  LA  +KEL+N +
Sbjct: 224 QKAPAATIETLAIALKELLNAH 245

The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 78/312 (25%), Positives = 124/312 (39%), Gaps = 64/312 (20%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           +IL+TG  G +G  LV  L E    EVI                 G  R  L + D+T+P
Sbjct: 1   KILITGATGMLGRALVRLLKERGY-EVIG---------------TGRSRASLFKLDLTDP 44

Query: 94  L-LIEV------DQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
             + E       D I + A       C + P           + NV+   N+   AK VG
Sbjct: 45  DAVEEAIRDYKPDVIINCAAYTRVDKCESDPE-------LAYRVNVLAPENLARAAKEVG 97

Query: 140 ARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
           AR++  ST  V+     P    +D       NP+ V   Y + K + E  + + + ++ I
Sbjct: 98  ARLIHISTDYVFDGKKGPYK-EEDAP-----NPLNV---YGKSKLLGEVAVLNANPRYLI 148

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            +R + +   YG   N      V   +  A   + + V     Q  S  Y +D+ D ++ 
Sbjct: 149 -LRTSWL---YGELKN--GENFVEWMLRLAAERKEVNVVH--DQIGSPTYAADLADAILE 200

Query: 257 LME-GENTGPINIGNPGEFTMLELAENVKELIN-PNVEI----TMVENTP-DDPRQRKPD 309
           L+E    TG  ++ N G  +  E A+ + + +  P+VEI    +     P   P     D
Sbjct: 201 LIERNSLTGIYHLSNSGPISKYEFAKLIADALGLPDVEIKPITSSEYPLPARRPANSSLD 260

Query: 310 ITKATELLGWEP 321
            +K  EL G +P
Sbjct: 261 CSKLEELGGIKP 272

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 62.4 bits (152), Expect = 4e-11
 Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 27/196 (13%)

Query: 36  LVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP- 93
           LVTGG GF+G H+V  L+ E E  EV V D  F+         +       I  DVT+  
Sbjct: 1   LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQ--VITYIEGDVTDKQ 58

Query: 94  ----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL-TSTS 148
                L   D + H A     +F K      +K NV GT N+L    + G R+L+ TS+ 
Sbjct: 59  DLRRALQGSDVVIHTAA-IIDVFGKAYRDTIMKVNVKGTQNVLDACVKAGVRVLVYTSSM 117

Query: 149 EV-----YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL--------MFDYHRQHG 195
           EV     YG P+V+  + + +        +  Y E K +AE L        + +  R + 
Sbjct: 118 EVVGPNSYGQPIVNGDETTPY----ESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYT 173

Query: 196 IEIRIARIFNTYGPRM 211
             +R A IF    P +
Sbjct: 174 CALRPAGIFGEGDPFL 189

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 61.1 bits (149), Expect = 8e-11
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 48/202 (23%)

Query: 37  VTGGAGFIGSHLVDKLMENEKNEVIVV----DNYFTGSKDNLRKWIGHPRFELIRH---- 88
           +TG  GF+G  L++KL+ +     I       +  +  +   ++ + +  F+ ++     
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 89  -----DVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIK-TNVIGTLNM 131
                D++EP L            EVD I H A  A+  F +  P   ++ TNV+GT  +
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNA--ATVNFVE--PYSDLRATNVLGTREV 116

Query: 132 LGLAKRVGARILL-TSTSEVYGDPLVHPQDE----------SYWGNVNPIGVRSCYDEGK 180
           L LAK++        ST+ V G+     +++             G  N       Y + K
Sbjct: 117 LRLAKQMKKLPFHHVSTAYVNGERGGLLEEKPYKLDEDEPALLGGLPNG------YTQSK 170

Query: 181 RVAETLMFDYHRQHGIEIRIAR 202
            +AE L+ +     G+ + I R
Sbjct: 171 WLAEQLVREAAG--GLPVVIYR 190

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|200085 TIGR01214, rmlD, dTDP-4-dehydrorhamnose reductase

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 64/287 (22%), Positives = 103/287 (35%), Gaps = 57/287 (19%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TG  G +G  LV +L   E   V+ +                  + +L   +  E 
Sbjct: 1   RILITGANGQLGRELVQQLS-PEGRVVVALT---------------RSQLDLTDPEALER 44

Query: 94  LL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151
           LL  I  D + + A        + +P K    N +   N+   A R GAR++  ST  V+
Sbjct: 45  LLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVF 104

Query: 152 ----GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
                 P     D       NP+ V   Y + K   E  +        I +R + ++   
Sbjct: 105 DGEGKRPY-REDDA-----TNPLNV---YGQSKLAGEQAVRAAGPNALI-VRTSWLYGGG 154

Query: 208 GPRMNIDDGRVVSNFIAQAIR----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           G R          NF+   +R    GE L V     Q  S  Y  D+   +  L++    
Sbjct: 155 GGR----------NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR 202

Query: 264 --GPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP 308
             G  ++ N G+ +  E A+ + E    +            P++ KP
Sbjct: 203 ARGVYHLANSGQCSWYEFAQAIFEEAGADGL-------LLHPQEVKP 242

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 287

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDV 90
           + VTGG GF+G HLV +L+EN    +++V +      +   +         R  ++  D+
Sbjct: 1   VFVTGGTGFLGRHLVKRLLENGFKVLVLVRS--ESLGEAHERIEEAGLEADRVRVLEGDL 58

Query: 91  TEP-----------LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           T+P           L  +VD + H A  AS   ++       +TN+ GT ++L LA R+ 
Sbjct: 59  TQPNLGLSAAASRELAGKVDHVIHCA--ASY-DFQAPNEDAWRTNIDGTEHVLELAARLD 115

Query: 140 AR 141
            +
Sbjct: 116 IQ 117

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 59.7 bits (145), Expect = 5e-10
 Identities = 61/239 (25%), Positives = 96/239 (40%), Gaps = 39/239 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
             LV GG+GF+G HLV++L+      V V D   T   D         R +    D+T+P
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSS----SGRVQFHTGDLTDP 56

Query: 94  LLIE-------VDQIYHLACPAS----PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
             +E        + ++H A P       ++Y        K NV GT N++   ++ G + 
Sbjct: 57  QDLEKAFNEKGPNVVFHTASPDHGSNDDLYY--------KVNVQGTRNVIEACRKCGVKK 108

Query: 143 LL--TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG----I 196
           L+  +S S V+    +   DES      P   +  Y+E K +AE L+   +         
Sbjct: 109 LVYTSSASVVFNGQDIINGDESL---PYPDKHQDAYNETKALAEKLVLKANDPESGLLTC 165

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
            +R A IF   GP     D ++V   +  A  G+       G     F YV ++    I
Sbjct: 166 ALRPAGIF---GPG----DRQLVPGLLKAAKNGKTKFQIGDGNNLFDFTYVENVAHAHI 217

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 27/129 (20%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF---TGSKDNLRKWI---GHPRFELI 86
           MR  VTGG GFIG  LV +L++  +   +    +      S   L       G  R   +
Sbjct: 1   MRYFVTGGTGFIGRRLVSRLLDRRREATV----HVLVRRQSLSRLEALAAYWGADRVVPL 56

Query: 87  RHDVTEPLL----------IEVDQIYHLACPASPIFYKYNP--VKTIKTNVIGTLNMLGL 134
             D+TEP L           ++D + HLA       Y            NV GT N++ L
Sbjct: 57  VGDLTEPGLGLSEADIAELGDIDHVVHLAA-----IYDLTADEEAQRAANVDGTRNVVEL 111

Query: 135 AKRVGARIL 143
           A+R+ A   
Sbjct: 112 AERLQAATF 120

Length = 657

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 56.8 bits (138), Expect = 3e-09
 Identities = 68/309 (22%), Positives = 119/309 (38%), Gaps = 49/309 (15%)

Query: 37  VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----RFELIRHDVTE 92
           VTG +GFIGS LV +L++        V +   G +  +   +       R +L + D+ +
Sbjct: 3   VTGASGFIGSWLVKRLLQRGYTVRATVRD--PGDEKKVAHLLELEGAKERLKLFKADLLD 60

Query: 93  PLLIE-----VDQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILL 144
               +      D ++H+A P    F  +    + I+  V GTLN+L    +  +  R++ 
Sbjct: 61  YGSFDAAIDGCDGVFHVASP--VDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKRVVF 118

Query: 145 T-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSC------YDEGKRVAETLMFDYHRQH 194
           T S + V  +P        DES W +++      C      Y   K +AE   +++  ++
Sbjct: 119 TSSVAAVVWNPNRGEGKVVDESCWSDLD-----FCKKTKLWYALSKTLAEKAAWEFAEEN 173

Query: 195 GIE---IRIARIF-NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS-- 248
           G++   +  + +      P +N       S  I   ++G          Q  S   V   
Sbjct: 174 GLDLVTVNPSLVVGPFLQPSLNSS-----SQLILSLLKGNA-----EMYQNGSLALVHVD 223

Query: 249 DMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEI-TMVENTPDDPRQRK 307
           D+ D  I L E  +     I +    T  ELA  + +   P   I T  E+      + K
Sbjct: 224 DVADAHILLYEKPSASGRYICSSHVVTRPELAALLAKKY-PQYNIPTKFEDDQPGVARVK 282

Query: 308 PDITKATEL 316
               K  +L
Sbjct: 283 LSSKKLKDL 291

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|233427 TIGR01472, gmd, GDP-mannose 4,6-dehydratase

 Score = 57.2 bits (138), Expect = 4e-09
 Identities = 75/305 (24%), Positives = 112/305 (36%), Gaps = 70/305 (22%)

Query: 73  NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML 132
           NLR+ I          D  +P      +IY+LA  +        P  T   + IGTL +L
Sbjct: 69  NLRRII----------DEIKP-----TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLL 113

Query: 133 ------GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL 186
                 GL K V  +    STSE+YG     PQ+E+      P   RS Y   K  A  +
Sbjct: 114 EAVRTLGLIKSV--KFYQASTSELYGKVQEIPQNET-----TPFYPRSPYAAAKLYAHWI 166

Query: 187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI-RGEPLTVQAPGTQT---- 241
             +Y   +G+      +FN   PR          NF+ + I R         G Q     
Sbjct: 167 TVNYREAYGLFAVNGILFNHESPRRG-------ENFVTRKITRA--AAKIKLGLQEKLYL 217

Query: 242 ------RSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNV---- 291
                 R + +  D V+ +  +++ +      I      ++ E  E   E I   +    
Sbjct: 218 GNLDAKRDWGHAKDYVEAMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKD 277

Query: 292 ----EITMVENTPD-----DPRQRKP--------DITKATELLGWEPKIKLRDGLPLM-E 333
               E+   + T       DPR  +P        D TKA E LGW+P++     +  M E
Sbjct: 278 KGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVE 337

Query: 334 DDFRL 338
           +D  L
Sbjct: 338 EDLEL 342

Alternate name: GDP-D-mannose dehydratase. This enzyme converts GDP-mannose to GDP-4-dehydro-6-deoxy-D-mannose, the first of three steps for the conversion of GDP-mannose to GDP-fucose in animals, plants, and bacteria. In bacteria, GDP-L-fucose acts as a precursor of surface antigens such as the extracellular polysaccharide colanic acid of E. coli. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 343

>gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 63/330 (19%), Positives = 107/330 (32%), Gaps = 68/330 (20%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
             V G +G IG  +  + +     +V +V         +  K    P  E++  D  +  
Sbjct: 2   AHVLGASGPIGREVA-RELRRRGWDVRLVSR-------SGSKLAWLPGVEIVAADAMDAS 53

Query: 95  LIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
            +       D IYH A PA   + +  P   +  NV+        A+  GA+++L     
Sbjct: 54  SVIAAARGADVIYHCANPAYTRWEELFP--PLMENVVAA------AEANGAKLVLPGNVY 105

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGK-RVA-ETLMFDYHRQHGIEIRIARIFNTY 207
           +YG     P  E       P        +G+ R   E  +   H +  I   I R  + Y
Sbjct: 106 MYGPQAGSPITEDT--PFQPTT-----RKGRIRAEMEERLLAAHAKGDIRALIVRAPDFY 158

Query: 208 GPRMNIDDGRVVSNFIAQAI----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME---- 259
           GP         +++++  A+    +G+             + Y+ D+   L+ L E    
Sbjct: 159 GP-------GAINSWLGAALFAILQGKTAVFPGNLDTPHEWTYLPDVARALVTLAEEPDA 211

Query: 260 -GENTGPINIGNPGEFTMLELAENVKELIN--PNVEI--------------TMVENTPDD 302
            GE     ++   G  T  EL           P V +               M E     
Sbjct: 212 FGE---AWHLPGAGAITTRELIAIAARAAGRPPKVRVIPKWTLRLAGLFDPLMREIVEMM 268

Query: 303 PRQRKP---DITKATELLGWEPKIKLRDGL 329
               +P   D +K     G  P   L + +
Sbjct: 269 YLWEEPFILDSSKLEATFGEIPHTPLDEAI 298

These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 56.0 bits (135), Expect = 8e-09
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 23/168 (13%)

Query: 36  LVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNL---RKWIGHPRFELIRHDV 90
           LVTGG GF+G H++  L+E ++   E+ V+D  F    + +    K  G      I  D+
Sbjct: 3   LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAF--GPELIEHFEKSQGKTYVTDIEGDI 60

Query: 91  T--EPLLIE---VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL- 144
                L      V  + H A     +F   N  +  + NV GT  +L    +   + L+ 
Sbjct: 61  KDLSFLFRACQGVSVVIHTAAIVD-VFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVY 119

Query: 145 TSTSEV-----YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM 187
           TS+ EV      G P+ +  +++ + + +       Y   K +AE ++
Sbjct: 120 TSSIEVAGPNFKGRPIFNGVEDTPYEDTSTPP----YASSKLLAENIV 163

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 61/284 (21%), Positives = 103/284 (36%), Gaps = 49/284 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLME-------------NEKNEVIVVDNYFTGSKDNLRKWIGHP 81
           +LVTG +GF+ SH+V++L+E               K    ++D         L    G  
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLD---------LDAKPGR- 50

Query: 82  RFELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
             EL   D+T+    +        ++H+A P S  F   +P + IK  + GTLN L  A 
Sbjct: 51  -LELAVADLTDEQSFDEVIKGCAGVFHVATPVS--FSSKDPNEVIKPAIGGTLNALKAAA 107

Query: 137 RVGA--RILLTSTSEVYGDPLVHPQ----DESYWGNVN-------PIGVRSCYDEGKRVA 183
              +  R +LTS++     P  + +    DE  W              V   Y   K +A
Sbjct: 108 AAKSVKRFVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV---YAASKTLA 164

Query: 184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA-PGTQTR 242
           E   + +  ++ I++       T G   + +     S +    I G      A       
Sbjct: 165 EKAAWKFADENNIDLITVIPTLTIGTIFDSETPS-SSGWAMSLITGNEGVSPALALIPPG 223

Query: 243 SFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKEL 286
            + +V D+    I  +E        I   G F    L + +++ 
Sbjct: 224 YYVHVVDICLAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKK 267

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|187580 cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 94/333 (28%), Positives = 126/333 (37%), Gaps = 61/333 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFE--LIRHDV 90
           RIL+TGG G IGS L   L +   K+ VI  D         +RK   H          DV
Sbjct: 1   RILITGGLGQIGSELAKLLRKRYGKDNVIASD---------IRKPPAHVVLSGPFEYLDV 51

Query: 91  TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
            +   +E       +  I HLA   S +  K NP      N+ G  N+L LA+    RI 
Sbjct: 52  LDFKSLEEIVVNHKITWIIHLAALLSAVGEK-NPPLAWDVNMNGLHNVLELAREHNLRIF 110

Query: 144 LTSTSEVYGD--PLVH-PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           + ST   +G   P  + P D        P   R+ Y   K  AE L   YH + G++ R 
Sbjct: 111 VPSTIGAFGPTTPRNNTPDDTI----QRP---RTIYGVSKVAAELLGEYYHHKFGVDFRS 163

Query: 201 AR----IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ-APGTQTRSFCYVSDMVDGLI 255
            R    I     P     D   V  F   A++    T    P T+     Y+ D +   I
Sbjct: 164 LRYPGIISYDTLPGGGTTD-YAVQIFYE-ALKKGKYTCYLKPDTRL-PMMYMPDALRATI 220

Query: 256 RLMEGENT-----GPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK--- 307
            LME            NI     FT  E+A  +K+ I P  +IT       DPR++    
Sbjct: 221 ELMEAPAEKLKHRRTYNI-TAMSFTPEEIAAEIKKHI-PEFQITYEV----DPRRQAIAD 274

Query: 308 --P---DITKATELLGWEPKIKLRDGLPLMEDD 335
             P   D + A +  GW+ K      L  M  D
Sbjct: 275 SWPMSLDDSNARKDWGWKHKY----DLDSMVKD 303

This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 308

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 40/207 (19%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVV------------------DNYFTGSKDNLR 75
            +L+TG  GF+G++L+ +L++ +    I                      Y         
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAKDEEAALERLIDNLKEYGL--NLWDE 58

Query: 76  KWIGHPRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTN 124
             +   R +++  D+++P L            EVD I H    A+ + + Y   +    N
Sbjct: 59  LEL--SRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIH--NGAN-VNWVYPYEELKPAN 113

Query: 125 VIGTLNMLGLA-KRVGARILLTSTSEVYGDPLVHPQDESYWGN--VNPIGVRSCYDEGKR 181
           V+GT  +L LA       +   ST  V+     +  D+    +   +  G+ + Y + K 
Sbjct: 114 VLGTKELLKLAATGKLKPLHFVSTLSVFSAEEYNALDDEESDDMLESQNGLPNGYIQSKW 173

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYG 208
           VAE L+ +   + G+ + I R  N +G
Sbjct: 174 VAEKLLREAANR-GLPVAIIRPGNIFG 199

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 68/328 (20%), Positives = 105/328 (32%), Gaps = 69/328 (21%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG  G +G  L   L   E+   +V               +  P  +L   +    L
Sbjct: 1   ILVTGANGQLGRELTRLL--AERGVEVVA--------------LDRPELDLTDPEAVAAL 44

Query: 95  LIEV--DQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           + E   D + + A       Y      +  P      N +G  N+       GA ++  S
Sbjct: 45  VREARPDVVVNAA------AYTAVDKAESEPELAYAVNALGPGNLAEACAARGAPLIHIS 98

Query: 147 TSEVY-GDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
           T  V+ G         D        P+ V   Y   K   E  +   + +H I +R A +
Sbjct: 99  TDYVFDGAKGGPYREDDP-----TGPLNV---YGRTKLAGEQAVLAANPRHLI-LRTAWV 149

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
           +  YG   N      V   +  A   + L V     Q  S     D+ D L+ L+     
Sbjct: 150 YGEYGN--NF-----VKTMLRLAAERDELRVVD--DQLGSPTSARDLADALLALIRKRLR 200

Query: 264 GP-----INIGNPGEFTMLELAENV-------KELINPNVEITMVE-NTP-DDPRQRKPD 309
           GP      ++   GE +  + A  +          + P   I   E  TP   P     D
Sbjct: 201 GPALAGTYHLAGSGETSWYDFARAIFDEAGADGGRVRP---IPTAEYPTPARRPANSVLD 257

Query: 310 ITKATELLGWEPKIKLRDGLPLMEDDFR 337
            +K     G       R+ L  + D+  
Sbjct: 258 TSKLEATFGIPLP-DWREALAEVLDELL 284

L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284

>gnl|CDD|132628 TIGR03589, PseB, UDP-N-acetylglucosamine 4,6-dehydratase

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 23/118 (19%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-----GHPRF 83
             +N  IL+TGG G  G   + +L+EN   + I++  Y   S+D L++W        P  
Sbjct: 1   MFNNKSILITGGTGSFGKAFISRLLENYNPKKIII--Y---SRDELKQWEMQQKFPAPCL 55

Query: 84  ELIRHDVT-----EPLLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNML 132
                DV         L  VD + H A     PA+    +YNP + I+TN+ G  N++
Sbjct: 56  RFFIGDVRDKERLTRALRGVDYVVHAAALKQVPAA----EYNPFECIRTNINGAQNVI 109

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. Length = 324

>gnl|CDD|178259 PLN02653, PLN02653, GDP-mannose 4,6-dehydratase

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 73/354 (20%), Positives = 128/354 (36%), Gaps = 92/354 (25%)

Query: 36  LVTGGAGFIGSHLVDKLME----------------NEKNEVIVVDNYFTGSK-------- 71
           L+TG  G  GS+L + L+                  ++ + I +D +   ++        
Sbjct: 10  LITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDL 69

Query: 72  ---DNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGT 128
               +LR+W+          D  +P     D++Y+LA  +        P  T      G 
Sbjct: 70  SDASSLRRWL----------DDIKP-----DEVYNLAAQSHVAVSFEMPDYTADVVATGA 114

Query: 129 LNML------GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV 182
           L +L      G       +     +SE+YG     PQ E+      P   RS Y   K  
Sbjct: 115 LRLLEAVRLHGQETGRQIKYYQAGSSEMYGS-TPPPQSET-----TPFHPRSPYAVAKVA 168

Query: 183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT- 241
           A     +Y   +G+      +FN   PR          NF+ + I      ++  G Q  
Sbjct: 169 AHWYTVNYREAYGLFACNGILFNHESPRRG-------ENFVTRKITRAVGRIKV-GLQKK 220

Query: 242 ---------RSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTM-LELAENVKELINPN- 290
                    R + +  D V+ +  +++ E         P ++ +  E +  V+E +    
Sbjct: 221 LFLGNLDASRDWGFAGDYVEAMWLMLQQEK--------PDDYVVATEESHTVEEFLEEAF 272

Query: 291 --VEITMVENTPDDPRQRKP--------DITKATELLGWEPKIKLRDGLPLMED 334
             V +   ++   DPR  +P        D +KA E+LGW+PK+     + +M D
Sbjct: 273 GYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGFEQLVKMMVD 326

Length = 340

>gnl|CDD|182998 PRK11150, rfaD, ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

 Score = 47.4 bits (113), Expect = 4e-06
 Identities = 19/37 (51%), Positives = 27/37 (72%)

Query: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK 71
          I+VTGGAGFIGS++V  L +    +++VVDN   G+K
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK 38

Length = 308

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 16/122 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           M++LVTG  GF+GS +V  L+E  E+  V+V          + R   G    E++  D+ 
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT------SDRRNLEGLD-VEIVEGDLR 53

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
           +P  +         ++H+A  A    +  +P +    NV GT N+L  A   G  R++ T
Sbjct: 54  DPASLRKAVAGCRALFHVA--ADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYT 111

Query: 146 ST 147
           S+
Sbjct: 112 SS 113

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 43/219 (19%), Positives = 75/219 (34%), Gaps = 43/219 (19%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN----------EKNE----------VIVVDNYFTGSKD 72
             +L+TG  GF+G++L+ +L++            +++            +  ++   S D
Sbjct: 1   RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSAD 60

Query: 73  NLRKWIGH---PRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
            +    G    P   L      E L   VD I H    A+ + + +   +    NV+GT 
Sbjct: 61  RVEVVAGDLAEPDLGLSERTWQE-LAENVDLIIH---NAALVNHVFPYSELRGANVLGTA 116

Query: 130 NMLGLAKRVGARIL-LTSTSEVYGDPLVH-------PQDESYWGNVNPIGVRSCYDEGKR 181
            +L LA     + L   S+  V                  +        G    Y   K 
Sbjct: 117 EVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAG---GYGRSKW 173

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGP----RMNIDDG 216
           VAE L+ +   + G+ + I R     G      +N  D 
Sbjct: 174 VAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDF 211

Length = 382

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 34/152 (22%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVV----DNYFTGSKD--NLRKWIGHPRFEL 85
             +L+TG  GF+G  L++KL+ +  +   I +     +  +  +    L K     R   
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRN 60

Query: 86  -----------IRHDVTEP-----------LLIEVDQIYHLACPASPIFYKYNPVKTIKT 123
                      I  D++EP           L+ EV+ I H A  A+  F +    + +  
Sbjct: 61  LNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCA--ATVTFDERLD-EALSI 117

Query: 124 NVIGTLNMLGLAKRV--GARILLTSTSEVYGD 153
           NV+GTL +L LAKR       +  ST+ V GD
Sbjct: 118 NVLGTLRLLELAKRCKKLKAFVHVSTAYVNGD 149

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 20/127 (15%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEP 93
           IL+ G  GFIG  L  +L+  + +EV ++       ++  R          ++  D+ + 
Sbjct: 1   ILILGATGFIGRALARELL-EQGHEVTLLV------RNTKRLSKEDQEPVAVVEGDLRDL 53

Query: 94  LLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             +      VD + HLA   +P   +       + +V GT N+L  AK  G    +  S+
Sbjct: 54  DSLSDAVQGVDVVIHLA--GAPRDTRDF----CEVDVEGTRNVLEAAKEAGVKHFIFISS 107

Query: 148 SEVYGDP 154
              YGD 
Sbjct: 108 LGAYGDL 114

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 33/124 (26%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           +LVTGG+G IG  +   L      +V+VV                  R +++ H+     
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS-----------------RRDVVVHNAAILD 43

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK-----RVGARILLTSTSE 149
              +  +                 + I+ NV+GT  +L  A+     +   R +L S+  
Sbjct: 44  DGRLIDL-----------TGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILISSVA 92

Query: 150 VYGD 153
               
Sbjct: 93  GLFG 96

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 35/211 (16%)

Query: 35  ILVTGGAGFIGSHLVDKLMEN-----------EKNEVIVVDNYFTGSKDNLRKW---IGH 80
           +L+TG  GF+G++L+++L+               +E   ++      +   R W   +  
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSY-RLWHEDLAR 60

Query: 81  PRFELIRHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL 129
            R E++  D++EP L             VD I H     +   Y Y+ ++    NV+GT 
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVN-WVYPYSELR--GANVLGTR 117

Query: 130 NMLGLAKRVGARIL-LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF 188
            +L LA    A+ L   ST  V     +    E       P G+   Y + K VAE L+ 
Sbjct: 118 EVLRLAASGRAKPLHYVSTISVGAAIDLSTVTEDDATVTPPPGLAGGYAQSKWVAELLV- 176

Query: 189 DYHRQHGIEIRIAR----IFNTYGPRMNIDD 215
                 G+ + I R    + N+Y   +N  D
Sbjct: 177 REASDRGLPVTIVRPGRILGNSYTGAINSSD 207

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
          M+ILVTG  GF+G  +V +L+   +   +    
Sbjct: 1  MKILVTGATGFVGGAVVRELL--ARGHEVRAAV 31

Length = 275

>gnl|CDD|215310 PLN02572, PLN02572, UDP-sulfoquinovose synthase

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 93/386 (24%), Positives = 133/386 (34%), Gaps = 122/386 (31%)

Query: 34  RILVTGGAGFIG----SHLVDKLMENEKNEVIVVDNY----------------FTGSKDN 73
           +++V GG G+ G     HL  +       EV +VDN                      + 
Sbjct: 49  KVMVIGGDGYCGWATALHLSKR-----GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHER 103

Query: 74  LRKW--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKT 120
           +R+W  +     EL   D+ +   +       E D + H     + P S I      V T
Sbjct: 104 VRRWKEVSGKEIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRS-RAVFT 162

Query: 121 IKTNVIGTLNMLGLAK--RVGARILLTSTSEVYGDP-------------------LVHPQ 159
              NVIGTLN+L   K       ++   T   YG P                   L +P+
Sbjct: 163 QHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPK 222

Query: 160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI---EIRIARIFNTYGPRMNIDD- 215
             S           S Y   K      +    +  GI   ++    ++        +D+ 
Sbjct: 223 QAS-----------SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEE 271

Query: 216 -----------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
                      G  ++ F  QA  G PLTV   G QTR F  + D V    R +E     
Sbjct: 272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTV----RCIE----- 322

Query: 265 PINIGNP---GE----------FTMLELAENVK---ELINPNVEITMVENTPDDPRQRKP 308
            I I NP   GE          F++ ELA+ V    E +  +VE+  V N    PR    
Sbjct: 323 -IAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEKLGLDVEVISVPN----PRVEAE 377

Query: 309 D---ITKATEL--LGWEPKIKLRDGL 329
           +     K T+L  LG EP   L D L
Sbjct: 378 EHYYNAKHTKLCELGLEP-HLLSDSL 402

Length = 442

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score = 40.9 bits (95), Expect = 6e-04
 Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 17/187 (9%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEP 93
           + VTG  G+I S +V  L+E        V N       +LR+   G  R  L + D+ + 
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY 72

Query: 94  LLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 147
             ++      D ++H A P +      +P + ++  V G   ++  A      R+++TS+
Sbjct: 73  EALKAAIDGCDGVFHTASPVTD-----DPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127

Query: 148 -SEVYGDPLVHPQ---DESYWGNVNPI-GVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              VY DP   P+   DES W +++     ++ Y  GK VAE   ++  ++ G+++ +  
Sbjct: 128 IGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLN 187

Query: 203 IFNTYGP 209
                GP
Sbjct: 188 PVLVLGP 194

Length = 342

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP- 93
           +LVTG  G++G  LV +L++ E ++V         S + L       R  ++R D+ +P 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQ-EGHQVRA----LVRSPEKLADRPWSERVTVVRGDLEDPE 55

Query: 94  ----LLIEVDQIYHL 104
                L  +D  Y+L
Sbjct: 56  SLRAALEGIDTAYYL 70

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 34/199 (17%)

Query: 35  ILVTGGAGFIGSHLVDKLM--------------ENEKNEVIVVDNYFTGSKDNLRKWIGH 80
           + VTG +G+I S +V  L+              + +K E ++      G+K+ L+ +   
Sbjct: 8   VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLA---LDGAKERLKLF--- 61

Query: 81  PRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKT--IKTNVIGTLNMLGLAKRV 138
            + +L+     E  +   D ++H    ASP+F+     +T  I   + GT+N+L   K  
Sbjct: 62  -KADLLEESSFEQAIEGCDAVFH---TASPVFFTVKDPQTELIDPALKGTINVLNTCKET 117

Query: 139 GA--RILLTSTSE--VYGDPLVHPQ---DESYWGNVNPI-GVRSCYDEGKRVAETLMFDY 190
            +  R++LTS++   ++  P +      DE+++ + +     ++ Y   K +AE   +++
Sbjct: 118 PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEF 177

Query: 191 HRQHGIEIRIARIFNTYGP 209
            + +GI++ +       GP
Sbjct: 178 AKDNGIDMVVLNPGFICGP 196

Length = 322

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 33 MRILVTGGAGFIGSHLVDKLMEN 55
          M++ VTG  GFIGS +V +L+  
Sbjct: 1  MKVFVTGATGFIGSAVVRELVAA 23

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
PLN00016	378	RNA-binding protein; Provisional	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	100.0
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	100.0
PLN02778	298	3,5-epimerase/4-reductase	100.0
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	100.0
PRK05865	854	hypothetical protein; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PLN02583	297	cinnamoyl-CoA reductase	99.98
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.97
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.97
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.97
PLN02260	668	probable rhamnose biosynthetic enzyme	99.96
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.96
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.95
PRK12320	699	hypothetical protein; Provisional	99.95
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.94
PLN02503	605	fatty acyl-CoA reductase 2	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.93
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.91
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.91
KOG2774	366	consensus NAD dependent epimerase [General functio	99.91
PRK06482	276	short chain dehydrogenase; Provisional	99.9
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.9
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.89
PRK09135	249	pteridine reductase; Provisional	99.88
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.88
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.87
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.87
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.86
PRK05875	276	short chain dehydrogenase; Provisional	99.86
PRK08263	275	short chain dehydrogenase; Provisional	99.86
PRK06180	277	short chain dehydrogenase; Provisional	99.86
PRK07074	257	short chain dehydrogenase; Provisional	99.86
PRK06914	280	short chain dehydrogenase; Provisional	99.85
PRK07067	257	sorbitol dehydrogenase; Provisional	99.85
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.85
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.85
PRK07775	274	short chain dehydrogenase; Provisional	99.85
PRK07774	250	short chain dehydrogenase; Provisional	99.84
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.84
PRK06194	287	hypothetical protein; Provisional	99.84
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.84
PRK07806	248	short chain dehydrogenase; Provisional	99.83
PRK06138	252	short chain dehydrogenase; Provisional	99.83
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.83
PRK05876	275	short chain dehydrogenase; Provisional	99.83
PRK06128	300	oxidoreductase; Provisional	99.83
PRK12827	249	short chain dehydrogenase; Provisional	99.83
PRK07890	258	short chain dehydrogenase; Provisional	99.83
PRK12829	264	short chain dehydrogenase; Provisional	99.83
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.82
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.82
PRK12746	254	short chain dehydrogenase; Provisional	99.82
PRK06123	248	short chain dehydrogenase; Provisional	99.82
PRK12828	239	short chain dehydrogenase; Provisional	99.82
PLN02253	280	xanthoxin dehydrogenase	99.82
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.82
PRK06182	273	short chain dehydrogenase; Validated	99.81
PRK06701	290	short chain dehydrogenase; Provisional	99.81
PRK07060	245	short chain dehydrogenase; Provisional	99.81
PRK06500	249	short chain dehydrogenase; Provisional	99.81
PRK06181	263	short chain dehydrogenase; Provisional	99.81
PRK05993	277	short chain dehydrogenase; Provisional	99.81
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.8
PRK06179	270	short chain dehydrogenase; Provisional	99.8
PRK05717	255	oxidoreductase; Validated	99.8
PRK09134	258	short chain dehydrogenase; Provisional	99.8
PRK09186	256	flagellin modification protein A; Provisional	99.8
PRK07985	294	oxidoreductase; Provisional	99.8
PRK07024	257	short chain dehydrogenase; Provisional	99.8
PRK08628	258	short chain dehydrogenase; Provisional	99.8
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.8
PRK08219	227	short chain dehydrogenase; Provisional	99.8
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.8
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.79
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.79
PRK12743	256	oxidoreductase; Provisional	99.78
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.78
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.78
PRK06523	260	short chain dehydrogenase; Provisional	99.78
PRK12939	250	short chain dehydrogenase; Provisional	99.78
PRK10538	248	malonic semialdehyde reductase; Provisional	99.77
PRK06841	255	short chain dehydrogenase; Provisional	99.77
PRK07326	237	short chain dehydrogenase; Provisional	99.77
PRK12744	257	short chain dehydrogenase; Provisional	99.77
PRK08324	681	short chain dehydrogenase; Validated	99.77
PRK09291	257	short chain dehydrogenase; Provisional	99.77
PRK08264	238	short chain dehydrogenase; Validated	99.77
PRK12937	245	short chain dehydrogenase; Provisional	99.77
PRK07814	263	short chain dehydrogenase; Provisional	99.77
PRK08643	256	acetoin reductase; Validated	99.77
PRK07825	273	short chain dehydrogenase; Provisional	99.77
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.76
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.76
PRK07856	252	short chain dehydrogenase; Provisional	99.76
PRK05650	270	short chain dehydrogenase; Provisional	99.76
PRK07041	230	short chain dehydrogenase; Provisional	99.76
PRK06398	258	aldose dehydrogenase; Validated	99.76
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.76
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.76
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK09242	257	tropinone reductase; Provisional	99.76
PRK08017	256	oxidoreductase; Provisional	99.76
PRK06196	315	oxidoreductase; Provisional	99.76
PRK07577	234	short chain dehydrogenase; Provisional	99.76
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.75
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK12747	252	short chain dehydrogenase; Provisional	99.75
PRK08589	272	short chain dehydrogenase; Validated	99.75
PRK07454	241	short chain dehydrogenase; Provisional	99.75
PRK06114	254	short chain dehydrogenase; Provisional	99.75
PRK06101	240	short chain dehydrogenase; Provisional	99.75
PRK12742	237	oxidoreductase; Provisional	99.75
PRK07478	254	short chain dehydrogenase; Provisional	99.75
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.75
PRK08251	248	short chain dehydrogenase; Provisional	99.75
PRK07063	260	short chain dehydrogenase; Provisional	99.75
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.75
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.74
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.74
PRK07069	251	short chain dehydrogenase; Validated	99.74
PRK06483	236	dihydromonapterin reductase; Provisional	99.74
PRK08265	261	short chain dehydrogenase; Provisional	99.74
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.74
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.74
PRK07035	252	short chain dehydrogenase; Provisional	99.74
PRK06949	258	short chain dehydrogenase; Provisional	99.74
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.74
PRK07102	243	short chain dehydrogenase; Provisional	99.74
PRK05866	293	short chain dehydrogenase; Provisional	99.74
PRK05867	253	short chain dehydrogenase; Provisional	99.74
PRK07904	253	short chain dehydrogenase; Provisional	99.73
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.73
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.73
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.73
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.73
COG2910	211	Putative NADH-flavin reductase [General function p	99.73
PRK07677	252	short chain dehydrogenase; Provisional	99.73
PRK08226	263	short chain dehydrogenase; Provisional	99.73
PRK06172	253	short chain dehydrogenase; Provisional	99.73
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.72
PRK08267	260	short chain dehydrogenase; Provisional	99.72
PRK06057	255	short chain dehydrogenase; Provisional	99.72
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.72
PRK05872	296	short chain dehydrogenase; Provisional	99.72
PRK07109	334	short chain dehydrogenase; Provisional	99.72
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.72
PRK08339	263	short chain dehydrogenase; Provisional	99.72
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.72
PRK07576	264	short chain dehydrogenase; Provisional	99.72
PRK05693	274	short chain dehydrogenase; Provisional	99.72
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.72
PRK08703	239	short chain dehydrogenase; Provisional	99.71
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.71
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.71
PRK09072	263	short chain dehydrogenase; Provisional	99.71
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.71
PRK06197	306	short chain dehydrogenase; Provisional	99.71
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.71
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.7
PRK06139	330	short chain dehydrogenase; Provisional	99.7
PRK08278	273	short chain dehydrogenase; Provisional	99.7
PRK06198	260	short chain dehydrogenase; Provisional	99.7
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.7
PRK07831	262	short chain dehydrogenase; Provisional	99.7
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.7
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.69
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.69
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.69
PRK06484	520	short chain dehydrogenase; Validated	99.69
PRK05854	313	short chain dehydrogenase; Provisional	99.69
PRK07832	272	short chain dehydrogenase; Provisional	99.68
PRK06924	251	short chain dehydrogenase; Provisional	99.68
PRK07062	265	short chain dehydrogenase; Provisional	99.68
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.67
PRK06940	275	short chain dehydrogenase; Provisional	99.67
PRK07023	243	short chain dehydrogenase; Provisional	99.66
PRK06953	222	short chain dehydrogenase; Provisional	99.66
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.66
PRK05855	582	short chain dehydrogenase; Validated	99.65
PRK07578	199	short chain dehydrogenase; Provisional	99.64
PRK07791	286	short chain dehydrogenase; Provisional	99.64
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.64
PRK12367	245	short chain dehydrogenase; Provisional	99.64
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.64
PRK05884	223	short chain dehydrogenase; Provisional	99.64
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.63
PRK06125	259	short chain dehydrogenase; Provisional	99.63
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.63
PLN02780	320	ketoreductase/ oxidoreductase	99.63
PRK07201	657	short chain dehydrogenase; Provisional	99.63
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.63
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.62
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.62
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.61
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.61
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.61
PRK05599	246	hypothetical protein; Provisional	99.59
PRK08177	225	short chain dehydrogenase; Provisional	99.59
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.59
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.59
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.58
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.58
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.57
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.55
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.55
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.54
PRK06484	520	short chain dehydrogenase; Validated	99.52
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.5
PLN00015	308	protochlorophyllide reductase	99.5
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.49
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.45
PRK08303	305	short chain dehydrogenase; Provisional	99.45
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.45
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.44
KOG0725	270	consensus Reductases with broad range of substrate	99.44
PRK08862	227	short chain dehydrogenase; Provisional	99.42
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.42
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.42
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.41
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.39
KOG1208	314	consensus Dehydrogenases with different specificit	99.38
COG1028	251	FabG Dehydrogenases with different specificities (	99.34
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.33
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.27
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.23
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.21
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.21
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.15
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.09
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.08
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.07
PTZ00325	321	malate dehydrogenase; Provisional	98.89
PRK08309	177	short chain dehydrogenase; Provisional	98.84
PRK06720	169	hypothetical protein; Provisional	98.83
PF13950	62	Epimerase_Csub: UDP-glucose 4-epimerase C-term sub	98.79
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	98.79
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.79
PLN00106	323	malate dehydrogenase	98.68
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.58
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.51
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	98.51
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.43
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.42
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.33
PRK09620	229	hypothetical protein; Provisional	98.31
PRK05086	312	malate dehydrogenase; Provisional	98.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.23
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.2
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.18
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.18
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.17
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.16
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	98.0
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.97
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.97
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.97
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.91
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.89
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.86
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.79
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.76
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	97.75
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.73
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.71
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.71
PRK14982	340	acyl-ACP reductase; Provisional	97.67
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.67
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.61
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.54
PLN02383	344	aspartate semialdehyde dehydrogenase	97.54
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.52
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.51
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	97.51
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.5
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.5
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.5
PRK04148	134	hypothetical protein; Provisional	97.36
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.36
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	97.33
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.3
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.29
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.28
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.26
COG3268	382	Uncharacterized conserved protein [Function unknow	97.24
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.24
PRK06223	307	malate dehydrogenase; Reviewed	97.23
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	97.19
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.18
PRK05442	326	malate dehydrogenase; Provisional	97.15
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.14
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.14
PLN02602	350	lactate dehydrogenase	97.14
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.12
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.06
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	97.03
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.01
PTZ00117	319	malate dehydrogenase; Provisional	97.01
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.01
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.0
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.0
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.95
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.95
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.94
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.92
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.89
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	96.85
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.84
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.83
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.83
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.81
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	96.77
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.76
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.76
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.75
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.7
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	96.66
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.66
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.64
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.63
PRK09496	453	trkA potassium transporter peripheral membrane com	96.6
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.59
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.56
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.56
PRK06901	322	aspartate-semialdehyde dehydrogenase; Provisional	96.54
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.45
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	96.38
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.38
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.35
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.34
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.34
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.34
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.26
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.23
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.19
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	96.19
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.16
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.11
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	96.09
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.08
PRK09496	453	trkA potassium transporter peripheral membrane com	96.07
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.04
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.03
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.96
PRK07417	279	arogenate dehydrogenase; Reviewed	95.94
PRK08655	437	prephenate dehydrogenase; Provisional	95.93
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.91
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.9
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	95.85
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	95.83
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	95.8
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.79
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.78
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	95.75
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.71
PF08732	410	HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti	95.68
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.68
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.66
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.64
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.59
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	95.51
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.49
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.49
PRK08328	231	hypothetical protein; Provisional	95.44
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.42
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.41
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.38
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	95.38
PRK06444	197	prephenate dehydrogenase; Provisional	95.36
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.34
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.34
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	95.32
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	95.3
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	95.27
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.27
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	95.27
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	95.27
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.27
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.25
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	95.25
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.25
PRK08223	287	hypothetical protein; Validated	95.24
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.2
TIGR01408	1008	Ube1 ubiquitin-activating enzyme E1. This model re	95.18
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.17
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	95.14
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.13
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	95.13
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.08
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	95.03
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.03
PRK13940	414	glutamyl-tRNA reductase; Provisional	95.01
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.99
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	94.99
PLN02775	286	Probable dihydrodipicolinate reductase	94.98
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.87
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	94.85
PLN03096	395	glyceraldehyde-3-phosphate dehydrogenase A; Provis	94.85
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	94.84
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	94.83
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	94.81
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	94.78
PRK13535	336	erythrose 4-phosphate dehydrogenase; Provisional	94.78
PRK06849	389	hypothetical protein; Provisional	94.78
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.77
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.76
PRK08955	334	glyceraldehyde-3-phosphate dehydrogenase; Validate	94.75
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.72
cd01493	425	APPBP1_RUB Ubiquitin activating enzyme (E1) subuni	94.7
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	94.67
PLN00203	519	glutamyl-tRNA reductase	94.65
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	94.62
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	94.62
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	94.59
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	94.59
PRK08306	296	dipicolinate synthase subunit A; Reviewed	94.56
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	94.55
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.49
PLN02256	304	arogenate dehydrogenase	94.42
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	94.4
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	94.39
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	94.38
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.34
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.32
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.28
PRK07411	390	hypothetical protein; Validated	94.26
PRK07574	385	formate dehydrogenase; Provisional	94.22
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.2
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.19
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	94.18
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.18
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.18
PRK08818	370	prephenate dehydrogenase; Provisional	94.11
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	94.07

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.8e-52  Score=340.33  Aligned_cols=311  Identities=79%  Similarity=1.263  Sum_probs=298.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      ..++|+||||.||||++|+++|...| |+|++++-........+..+...+.++++.-|+..+...++|.|+|+|++.++
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~eg-h~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp  104 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEG-HEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP  104 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcC-CeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence            35899999999999999999999999 99999999888888888888899999999999999999999999999999999


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHH
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY  190 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  190 (346)
                      .....+|-+.+..|..++.+++..|++.+.||++.||+.|||++...|..|++|.+..|..|...|...|+.+|.++..+
T Consensus       105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y  184 (350)
T KOG1429|consen  105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY  184 (350)
T ss_pred             cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          191 HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       191 ~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      .++.++.+.|.|+.+.|||...+..++.+.+++.+.+.+.++.+++++.+.++|.+++|+++.++++++.+..+.+|+++
T Consensus       185 ~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~pvNiGn  264 (350)
T KOG1429|consen  185 HKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRGPVNIGN  264 (350)
T ss_pred             hcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcCCcccCC
Confidence            99999999999999999999988889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcC
Q 019060          271 PGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       271 ~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~  342 (346)
                      ++.+|+.|+++++.+..+....++..+..+.++..+..|++++++.|||.|+++|+|+++.++.|++++...
T Consensus       265 p~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~t~~~fr~~i~~  336 (350)
T KOG1429|consen  265 PGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPLTVTYFRERIAR  336 (350)
T ss_pred             ccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHHHHHHHHHHHHH
Confidence            999999999999999999989999999999999999999999999999999999999999999999888654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=3.2e-50  Score=368.76  Aligned_cols=311  Identities=74%  Similarity=1.216  Sum_probs=266.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      ..|||||||||||||++|+++|+++| ++|++++|...............++++++.+|+.+....++|+|||+|+...+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G-~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~  197 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRG-DEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASP  197 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECceeccc
Confidence            45899999999999999999999999 99999998643333322222334578899999998877899999999987665


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHH
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY  190 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  190 (346)
                      .....++...++.|+.++.+++++|++.+++|||+||..|||.....+.+|+.+....|..|.+.|+.+|..+|++++.+
T Consensus       198 ~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y  277 (436)
T PLN02166        198 VHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDY  277 (436)
T ss_pred             hhhccCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            45556788999999999999999999988899999999999977667788876655557777788999999999999999


Q ss_pred             HHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          191 HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       191 ~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      .+..+++++++||+++|||+.....+.++..++..+..++.+.++++++..++|+|++|+|++++.+++....|+||+++
T Consensus       278 ~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~~giyNIgs  357 (436)
T PLN02166        278 HRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEHVGPFNLGN  357 (436)
T ss_pred             HHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCCCceEEeCC
Confidence            88889999999999999998654446678889999999999988888888999999999999999999876678999999


Q ss_pred             CCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcC
Q 019060          271 PGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       271 ~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~  342 (346)
                      ++.+|+.|+++.+.+.+|.+..+.+.+..........+|++|++++|||+|+++++++++++++||+++...
T Consensus       358 ~~~~Si~ela~~I~~~~g~~~~i~~~p~~~~~~~~~~~d~~Ka~~~LGw~P~~sl~egl~~~i~~~~~~~~~  429 (436)
T PLN02166        358 PGEFTMLELAEVVKETIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPKISLREGLPLMVSDFRNRILN  429 (436)
T ss_pred             CCcEeHHHHHHHHHHHhCCCCCeeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999887777766555555667789999999999999999999999999999877543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.2e-50  Score=332.23  Aligned_cols=301  Identities=31%  Similarity=0.487  Sum_probs=273.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCC-CCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |++|||||.||||+++++.++++.. .+|++++.= -..+.+.+......++..|+++|+.|.+.+       ++|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            6899999999999999999999975 457887762 345666677777788999999999997544       5999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCC--CCCCCCcCCCCCCCCCCchHHh
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      +|+-++...+-..|..+++.|+.|+.+|++++++...  ||+++||..|||.-...  .++|+     +|..|.++|+.|
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~-----tp~~PsSPYSAS  155 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTET-----TPYNPSSPYSAS  155 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccC-----CCCCCCCCcchh
Confidence            9999888888899999999999999999999999985  99999999999975433  46677     799999999999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      |+....+++.+.+.++++++|.|+++-|||.+.+  .-+++.++..++.|++++++|+|.+.+||+||+|-|++|..++.
T Consensus       156 KAasD~lVray~~TYglp~~ItrcSNNYGPyqfp--EKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~  233 (340)
T COG1088         156 KAASDLLVRAYVRTYGLPATITRCSNNYGPYQFP--EKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT  233 (340)
T ss_pred             hhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCc--hhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence            9999999999999999999999999999998653  56889999999999999999999999999999999999999999


Q ss_pred             CCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-----eEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHH
Q 019060          260 GEN-TGPINIGNPGEFTMLELAENVKELINPNVE-----ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME  333 (346)
Q Consensus       260 ~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~  333 (346)
                      +.. +++||++++...+.-|+++.+.+.+|+..+     +.++.+.+....+..+|.+|+.++|||.|+++||++|++++
T Consensus       234 kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eLgW~P~~~fe~GlrkTv  313 (340)
T COG1088         234 KGKIGETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVEDRPGHDRRYAIDASKIKRELGWRPQETFETGLRKTV  313 (340)
T ss_pred             cCcCCceEEeCCCccchHHHHHHHHHHHhCccccchhhheEeccCCCCCccceeechHHHhhhcCCCcCCCHHHHHHHHH
Confidence            887 779999999999999999999999998877     88999999999999999999999999999999999999999


Q ss_pred             HHHHHhh
Q 019060          334 DDFRLRL  340 (346)
Q Consensus       334 ~~~~~~~  340 (346)
                      +||.++.
T Consensus       314 ~WY~~N~  320 (340)
T COG1088         314 DWYLDNE  320 (340)
T ss_pred             HHHHhch
Confidence            9998864

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.6e-50  Score=332.77  Aligned_cols=296  Identities=29%  Similarity=0.474  Sum_probs=261.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+||||||.||||++.+.+|++.| ++|++++.-.....+.+...    .++++++|+.|...+       ++|+|||+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G-~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTG-HEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCC-CeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECc
Confidence            799999999999999999999999 99999998665555554331    278999999997554       699999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      |......+-.+|.++++-|+.++..|+++|++.++ +|||.||++|||.+...|++|+     .|..|.++||.||++.|
T Consensus        76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~-----~~~~p~NPYG~sKlm~E  150 (329)
T COG1087          76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISET-----SPLAPINPYGRSKLMSE  150 (329)
T ss_pred             cccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCC-----CCCCCCCcchhHHHHHH
Confidence            98888888899999999999999999999999999 8999999999999999999999     78889999999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCC-------CccHHHHHHHHHHcCCC-eEEecC------CcceeecccHHHH
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIRGEP-LTVQAP------GTQTRSFCYVSDM  250 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~v~v~Dv  250 (346)
                      ++++.++..++++++++|.+++.|......       .+.+++..++.++.... +.++|+      +...+|||||.|+
T Consensus       151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL  230 (329)
T COG1087         151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL  230 (329)
T ss_pred             HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence            999999999999999999999998654321       14677777776665444 777776      4456899999999


Q ss_pred             HHHHHHHHhC---CC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccc-cH
Q 019060          251 VDGLIRLMEG---EN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKI-KL  325 (346)
Q Consensus       251 a~~i~~~~~~---~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~  325 (346)
                      |++.+.+++.   .. ..+||+++|...|+.|+++++.++.|.+++.++.+..+.++...+.|.+|+++.|||+|++ ++
T Consensus       231 A~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~RR~GDpa~l~Ad~~kA~~~Lgw~p~~~~L  310 (329)
T COG1087         231 ADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPRRAGDPAILVADSSKARQILGWQPTYDDL  310 (329)
T ss_pred             HHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCCCCCCCceeEeCHHHHHHHhCCCcccCCH
Confidence            9999988854   22 3589999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HhHHHHHHHHHHH
Q 019060          326 RDGLPLMEDDFRL  338 (346)
Q Consensus       326 ~e~i~~~~~~~~~  338 (346)
                      ++.++...+|..+
T Consensus       311 ~~ii~~aw~W~~~  323 (329)
T COG1087         311 EDIIKDAWDWHQQ  323 (329)
T ss_pred             HHHHHHHHHHhhh
Confidence            9999999999875

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=1.3e-49  Score=365.43  Aligned_cols=310  Identities=74%  Similarity=1.216  Sum_probs=265.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      ..|||||||||||||++|+++|+++| ++|++++|......+........++++++.+|+.+....++|+|||+|+...+
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G-~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~  196 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARG-DSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASP  196 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCc-CEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecch
Confidence            45999999999999999999999999 99999987543333333223344678999999999888899999999987665


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHH
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY  190 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  190 (346)
                      .....++...++.|+.++.+++++|++.++||||+||..+|+.....+.+|+.+....|..+.+.|+.+|.++|+++..+
T Consensus       197 ~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y  276 (442)
T PLN02206        197 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDY  276 (442)
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHH
Confidence            55556788999999999999999999998999999999999977666778876554456666788999999999999998


Q ss_pred             HHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          191 HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       191 ~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      .+..+++++++||+++|||+.....+.++..++..+..++++.+++++++.++|+|++|+|++++.+++....|.||+++
T Consensus       277 ~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~~g~yNIgs  356 (442)
T PLN02206        277 HRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGN  356 (442)
T ss_pred             HHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCCCceEEEcC
Confidence            88889999999999999998654445677888888888888888888888999999999999999999876678999999


Q ss_pred             CCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          271 PGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       271 ~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      ++.+|+.|+++.+.+.+|.+..+.+.+..........+|++|++++|||+|+++++|+|+++++||++...
T Consensus       357 ~~~~sl~Elae~i~~~~g~~~~i~~~p~~~~~~~~~~~d~sKa~~~LGw~P~~~l~egl~~~~~~~~~~~~  427 (442)
T PLN02206        357 PGEFTMLELAKVVQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDFRQRVF  427 (442)
T ss_pred             CCceeHHHHHHHHHHHhCCCCceeeCCCCCCCccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhhh
Confidence            99999999999999999987777776655555566778999999999999999999999999999987653

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=1.4e-47  Score=345.18  Aligned_cols=304  Identities=26%  Similarity=0.356  Sum_probs=246.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc------CCCCeeEEecccCCcc-----cCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPL-----LIEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~-----~~~~d   99 (346)
                      .+|+|||||||||||++|+++|+++| ++|++++|.............      ...++.++.+|+.+..     ..++|
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLN-QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            46899999999999999999999999 999999985432222111111      1135788999999864     23799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      +|||+|+.........++....+.|+.++.+++++|++.++ +|||+||..+||...+.+..|+     ++..|.+.|+.
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y~~  167 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEE-----RIGRPLSPYAV  167 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCC-----CCCCCCChhhH
Confidence            99999997655455567888899999999999999999988 8999999999997555555665     45567788999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|.++|.+++.+.+..+++++++||+++|||+..+..  ..+++.++..+..++++.+++++.+.++|+|++|+|++++.
T Consensus       168 sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~  247 (348)
T PRK15181        168 TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLL  247 (348)
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence            9999999999988888999999999999999865432  34678888888889888888889999999999999999998


Q ss_pred             HHhCC----CCCcEEecCCCCCCHHHHHHHHHHHcCCC------cceEEccCCCCCCCcccCChHHHHhhcCCcccccHH
Q 019060          257 LMEGE----NTGPINIGNPGEFTMLELAENVKELINPN------VEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR  326 (346)
Q Consensus       257 ~~~~~----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~------~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  326 (346)
                      ++...    .+++||+++++.+|+.|+++.+.+.++..      ..+...+..+.......+|++|+++.|||+|+++++
T Consensus       248 ~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~P~~sl~  327 (348)
T PRK15181        248 SATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFLSYEPEFDIK  327 (348)
T ss_pred             HHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCcccCCCCCCcccccccCHHHHHHHhCCCCCCCHH
Confidence            77542    25799999999999999999999998732      112222333334445678999999999999999999


Q ss_pred             hHHHHHHHHHHHhh
Q 019060          327 DGLPLMEDDFRLRL  340 (346)
Q Consensus       327 e~i~~~~~~~~~~~  340 (346)
                      |+++++++||+.+.
T Consensus       328 egl~~~~~w~~~~~  341 (348)
T PRK15181        328 EGLKQTLKWYIDKH  341 (348)
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999997664

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=6.3e-44  Score=321.78  Aligned_cols=308  Identities=30%  Similarity=0.504  Sum_probs=242.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccC-Ccc-----cCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EPL-----LIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~-----~~~~d~vi~~  104 (346)
                      +|+|||||||||||++|+++|+++ | ++|++++|...    .........+++++.+|+. +..     ..++|+|||+
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~-~~V~~~~r~~~----~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~   75 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTD-WEVYGMDMQTD----RLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPL   75 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCC-CeEEEEeCcHH----HHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEEC
Confidence            378999999999999999999986 6 89999988432    1222223356899999997 432     2379999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCC-CC-CCCCCchHHhHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK~~  182 (346)
                      |+...+.....++...++.|+.++.+++++|++.+.||||+||..+||.....+..|+..+.. .+ ..|.+.|+.+|.+
T Consensus        76 aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~  155 (347)
T PRK11908         76 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQL  155 (347)
T ss_pred             cccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHH
Confidence            997665555678888899999999999999999888999999999998655555666532110 01 2356689999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCC------CCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|+.++.++...+++++++||+++|||+...      ....++..++..+..++++.+.+++++.++|+|++|++++++.
T Consensus       156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~  235 (347)
T PRK11908        156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMK  235 (347)
T ss_pred             HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHH
Confidence            9999999988889999999999999998532      1245788888888889888887778889999999999999999


Q ss_pred             HHhCCC----CCcEEecCC-CCCCHHHHHHHHHHHcCCCcce-------EEcc--C------CCCCCCcccCChHHHHhh
Q 019060          257 LMEGEN----TGPINIGNP-GEFTMLELAENVKELINPNVEI-------TMVE--N------TPDDPRQRKPDITKATEL  316 (346)
Q Consensus       257 ~~~~~~----~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~-------~~~~--~------~~~~~~~~~~~~~k~~~~  316 (346)
                      +++++.    +++||++++ ..+|+.|+++.+.+.+|....+       ....  .      ..........|.+|+++.
T Consensus       236 ~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~  315 (347)
T PRK11908        236 IIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQE  315 (347)
T ss_pred             HHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcCcchhccccCChHHHHHH
Confidence            998752    568999987 4799999999999999854322       1111  0      001122445688999999


Q ss_pred             cCCcccccHHhHHHHHHHHHHHhhcCCC
Q 019060          317 LGWEPKIKLRDGLPLMEDDFRLRLAVPR  344 (346)
Q Consensus       317 lg~~p~~~~~e~i~~~~~~~~~~~~~~~  344 (346)
                      |||+|+++++++++++++|++.+...+|
T Consensus       316 lGw~p~~~l~~~l~~~~~~~~~~~~~~~  343 (347)
T PRK11908        316 LGWAPKTTMDDALRRIFEAYRGHVAEAR  343 (347)
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988765443

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=1.1e-43  Score=319.79  Aligned_cols=300  Identities=23%  Similarity=0.267  Sum_probs=237.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcC------CCCeeEEecccCCcccC-------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG------HPRFELIRHDVTEPLLI-------EV   98 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~------~~~~~~~~~d~~~~~~~-------~~   98 (346)
                      |+||||||+||||++|+++|++.| ++|++++|..... .........      ..++.++.+|++|...+       ++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKG-YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCC-CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCC
Confidence            589999999999999999999999 9999999864321 111211110      23588999999987432       57


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      |+|||+|+..+.......+...++.|+.++.+++++|++.++    +|||+||..+||.....+.+|+     .+..|.+
T Consensus        80 d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~  154 (343)
T TIGR01472        80 TEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNET-----TPFYPRS  154 (343)
T ss_pred             CEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCC-----CCCCCCC
Confidence            999999997654444456677788999999999999998763    7999999999997665667777     5667888


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC-CccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      .|+.+|.++|.+++.++++.++++++.|+.++|||+.... ....+..++..+..++. ...++++++.++|+|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~  234 (343)
T TIGR01472       155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVE  234 (343)
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHH
Confidence            9999999999999999888889999999999999974321 12345556666666754 345577889999999999999


Q ss_pred             HHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcce-------------------EE--ccCCCCCCCcccCChH
Q 019060          253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEI-------------------TM--VENTPDDPRQRKPDIT  311 (346)
Q Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~-------------------~~--~~~~~~~~~~~~~~~~  311 (346)
                      +++.+++++..+.||+++++++|+.|+++.+.+.+|.+..+                   ..  .+..+........|++
T Consensus       235 a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  314 (343)
T TIGR01472       235 AMWLMLQQDKPDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDAT  314 (343)
T ss_pred             HHHHHHhcCCCccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHH
Confidence            99999987666899999999999999999999999965431                   11  1123334445667999


Q ss_pred             HHHhhcCCcccccHHhHHHHHHHHHHH
Q 019060          312 KATELLGWEPKIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       312 k~~~~lg~~p~~~~~e~i~~~~~~~~~  338 (346)
                      |++++|||+|+++++|+|++++++|++
T Consensus       315 k~~~~lgw~p~~~l~egi~~~~~~~~~  341 (343)
T TIGR01472       315 KAKEKLGWKPEVSFEKLVKEMVEEDLE  341 (343)
T ss_pred             HHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999999873

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=2.5e-43  Score=322.13  Aligned_cols=307  Identities=29%  Similarity=0.419  Sum_probs=233.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC-----CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI-----EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~-----~~d~vi~  103 (346)
                      .|+|||||||||||++|+++|+++|.++|++++|...... .+...   ....+++++.+|+.+...+     ++|+|||
T Consensus        14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~-~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH   92 (386)
T PLN02427         14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIK-HLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN   92 (386)
T ss_pred             CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhh-hhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence            4799999999999999999999983289999988532211 11110   0124689999999986432     6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCC----------CC-----
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN----------VN-----  168 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~----------~~-----  168 (346)
                      +|+...+.....++...+..|+.++.+++++|++.+.||||+||..+||.......+|+....          ..     
T Consensus        93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~  172 (386)
T PLN02427         93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIF  172 (386)
T ss_pred             cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccccc
Confidence            998765444445666777889999999999999887799999999999865433333321100          00     


Q ss_pred             --CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC---------CccHHHHHHHHHHcCCCeEEecC
Q 019060          169 --PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID---------DGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       169 --~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                        ...+.+.|+.+|.++|.++..+++..+++++++||+++|||+....         ...++..++..++.++++.++++
T Consensus       173 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~  252 (386)
T PLN02427        173 GSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDG  252 (386)
T ss_pred             CCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECC
Confidence              0123467999999999999998888899999999999999975321         12456667777788888888888


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC---CCcEEecCC-CCCCHHHHHHHHHHHcCCCcc-----eE--EccCC------C
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP-GEFTMLELAENVKELINPNVE-----IT--MVENT------P  300 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~-----~~--~~~~~------~  300 (346)
                      ++..++|+|++|+|++++.+++++.   +++||++++ +.+|+.|+++.+.+.+|....     ..  ..+..      .
T Consensus       253 g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  332 (386)
T PLN02427        253 GQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGY  332 (386)
T ss_pred             CCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCcccccCccc
Confidence            8888999999999999999998753   468999987 599999999999999984211     11  11111      1


Q ss_pred             CCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHh
Q 019060          301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       301 ~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      ........|.+|++++|||+|+++++++|+++++|+++.
T Consensus       333 ~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~  371 (386)
T PLN02427        333 DDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKT  371 (386)
T ss_pred             cchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHH
Confidence            233456679999999999999999999999999998765

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=7.1e-43  Score=316.22  Aligned_cols=301  Identities=29%  Similarity=0.409  Sum_probs=237.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEE-EEeCCCCCC-cchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGS-KDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~-~~~r~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+|||||||||||++|+++|+++| ++++ +++|..... ...........++.++.+|+.+....       ++|+|||
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINET-SDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcC-CCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            689999999999999999999999 7654 444432111 11111111223578889999986533       4899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEecccccCCCC--CCCCCCCCcCCCCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPL--VHPQDESYWGNVNPIG  171 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-r~i~~SS~~v~~~~~--~~~~~e~~~~~~~~~~  171 (346)
                      +||..........+...++.|+.++.+++++|++.         ++ +||++||..+|+...  ..+.+|+     .+..
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~-----~~~~  155 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTET-----TPYA  155 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCC-----CCCC
Confidence            99876543344567889999999999999999863         34 899999999998532  3356676     5666


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      |.+.|+.+|.++|.+++.++++.+++++++||+++|||+...  ..+++.++.....++++.+++++++.++|+|++|+|
T Consensus       156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a  233 (355)
T PRK10217        156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHA  233 (355)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHH
Confidence            778899999999999999988889999999999999998532  356777878888888888888999999999999999


Q ss_pred             HHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc------------eEEccCCCCCCCcccCChHHHHhhcC
Q 019060          252 DGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVE------------ITMVENTPDDPRQRKPDITKATELLG  318 (346)
Q Consensus       252 ~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~------------~~~~~~~~~~~~~~~~~~~k~~~~lg  318 (346)
                      ++++.+++... +++||+++++++|+.|+++.+.+.+|....            +...+..+.......+|++|+++.||
T Consensus       234 ~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  313 (355)
T PRK10217        234 RALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELG  313 (355)
T ss_pred             HHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcC
Confidence            99999998765 579999999999999999999999874221            11122223334456789999999999


Q ss_pred             CcccccHHhHHHHHHHHHHHhhc
Q 019060          319 WEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       319 ~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      |+|+++++|+++++++||..+..
T Consensus       314 ~~p~~~l~e~l~~~~~~~~~~~~  336 (355)
T PRK10217        314 WLPQETFESGMRKTVQWYLANES  336 (355)
T ss_pred             CCCcCcHHHHHHHHHHHHHhCHH
Confidence            99999999999999999977644

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=1e-42  Score=320.82  Aligned_cols=306  Identities=27%  Similarity=0.345  Sum_probs=234.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc----------------chhhhh--cCCCCeeEEecccC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------DNLRKW--IGHPRFELIRHDVT   91 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----------------~~~~~~--~~~~~~~~~~~d~~   91 (346)
                      .++|+||||||+||||++|+++|+++| ++|++++|......                ..+..+  ....+++++.+|+.
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRG-YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            457899999999999999999999999 99999875321110                001000  01236889999999


Q ss_pred             CcccC-------CCCEEEEcccCCCccccccC---hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCC
Q 019060           92 EPLLI-------EVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        92 ~~~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~  159 (346)
                      |...+       ++|+|||+|+.........+   ....++.|+.++.+++++|++.++  +||++||..+||... .+.
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~  202 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDI  202 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCC
Confidence            87533       58999999976543333333   345678999999999999999885  799999999998642 233


Q ss_pred             CCCCcC-------C--CCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC---------------C
Q 019060          160 DESYWG-------N--VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID---------------D  215 (346)
Q Consensus       160 ~e~~~~-------~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~---------------~  215 (346)
                      +|....       +  ..+..|.++|+.+|.++|.+++.+++..+++++++||+++|||+....               .
T Consensus       203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~  282 (442)
T PLN02572        203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVF  282 (442)
T ss_pred             cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccch
Confidence            333110       0  025567788999999999999999988899999999999999985431               0


Q ss_pred             ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-C---CcEEecCCCCCCHHHHHHHHHHH---cC
Q 019060          216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T---GPINIGNPGEFTMLELAENVKEL---IN  288 (346)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~---~~~~~~~~~~~s~~ei~~~i~~~---~g  288 (346)
                      ...+..++..+..|+++.+++++++.++|+||+|+|++++.++++.. .   ++||+++ +.+|+.|+++.+.+.   +|
T Consensus       283 ~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g  361 (442)
T PLN02572        283 GTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLG  361 (442)
T ss_pred             hhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhC
Confidence            24566777788888888888899999999999999999999998653 2   3799976 789999999999999   88


Q ss_pred             CCcceEEccCC--CCCCCcccCChHHHHhhcCCcccc---cHHhHHHHHHHHHHHh
Q 019060          289 PNVEITMVENT--PDDPRQRKPDITKATELLGWEPKI---KLRDGLPLMEDDFRLR  339 (346)
Q Consensus       289 ~~~~~~~~~~~--~~~~~~~~~~~~k~~~~lg~~p~~---~~~e~i~~~~~~~~~~  339 (346)
                      .+..+...+..  .........|.+|+++ |||+|++   ++++++.++++||+++
T Consensus       362 ~~~~~~~~p~~~~~~~~~~~~~d~~k~~~-LGw~p~~~~~~l~~~l~~~~~~~~~~  416 (442)
T PLN02572        362 LDVEVISVPNPRVEAEEHYYNAKHTKLCE-LGLEPHLLSDSLLDSLLNFAVKYKDR  416 (442)
T ss_pred             CCCCeeeCCCCcccccccccCccHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHhh
Confidence            77666655432  2222345678999975 9999998   8999999999999755

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=9.2e-43  Score=313.46  Aligned_cols=304  Identities=22%  Similarity=0.285  Sum_probs=240.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhc-----CCCCeeEEecccCCcccC-------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI-----GHPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~-----~~~~~~~~~~d~~~~~~~-------~   97 (346)
                      .+|+||||||+||||++|+++|++.| ++|++++|..... ...+....     ...++.++.+|+.+....       +
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKG-YEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCC-CEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999998854321 11121111     123578999999986433       4


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC------eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +|+|||+|+.........++...++.|+.++.+++++|++.++      +||++||..+||.... +.+|+     .+..
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~-----~~~~  157 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSET-----TPFH  157 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCC-----CCCC
Confidence            8999999997654444566778889999999999999998774      7999999999997554 66776     5677


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEE-ecCCcceeecccHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTV-QAPGTQTRSFCYVSD  249 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D  249 (346)
                      |.+.|+.+|.++|.+++.++.++++.++..|+.++|||+..... ...+..++..+..++.+.+ .+++++.++|+|++|
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D  237 (340)
T PLN02653        158 PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGD  237 (340)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHH
Confidence            88899999999999999998888888899999999999743211 2234445555666765544 477889999999999


Q ss_pred             HHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCC--cceEEcc--CCCCCCCcccCChHHHHhhcCCcccccH
Q 019060          250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPN--VEITMVE--NTPDDPRQRKPDITKATELLGWEPKIKL  325 (346)
Q Consensus       250 va~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~--~~~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~  325 (346)
                      +|++++.+++....+.||+++++++|+.|+++.+.+.+|.+  ..+.+.+  ..+........|++|+++.|||+|++++
T Consensus       238 ~a~a~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l  317 (340)
T PLN02653        238 YVEAMWLMLQQEKPDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVLGWKPKVGF  317 (340)
T ss_pred             HHHHHHHHHhcCCCCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHhCCCCCCCH
Confidence            99999999987667899999999999999999999999864  2233222  2344444567799999999999999999


Q ss_pred             HhHHHHHHHHHHHhhc
Q 019060          326 RDGLPLMEDDFRLRLA  341 (346)
Q Consensus       326 ~e~i~~~~~~~~~~~~  341 (346)
                      +|+|+++++||++..+
T Consensus       318 ~~gi~~~~~~~~~~~~  333 (340)
T PLN02653        318 EQLVKMMVDEDLELAK  333 (340)
T ss_pred             HHHHHHHHHHHHHhcC
Confidence            9999999999987765

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=1.5e-42  Score=313.94  Aligned_cols=303  Identities=27%  Similarity=0.406  Sum_probs=238.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .+|+|||||||||||++|++.|+++| |+|++++|.....   ...  ......++.+|+.+...     .++|+|||+|
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G-~~V~~v~r~~~~~---~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEG-HYIIASDWKKNEH---MSE--DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCC-CEEEEEEeccccc---ccc--ccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            47899999999999999999999999 9999999853211   110  01135678899987642     3799999999


Q ss_pred             cCCCcc-ccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC----CCCCCCcCCCCCCCCCCchHHh
Q 019060          106 CPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH----PQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       106 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~----~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      +..... ....++...+..|+.++.+++++|++.++ +|||+||..+|+.....    +..|+..   .+..|.+.|+.+
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~---~p~~p~s~Yg~s  170 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDA---WPAEPQDAYGLE  170 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccC---CCCCCCCHHHHH
Confidence            865321 12234556678899999999999999987 89999999999864321    2444321   256677899999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHc-CCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      |.++|.+++.++...+++++++||+++|||+.....  ......++..+.. +.++.+++++++.++|+|++|++++++.
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~  250 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR  250 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence            999999999988888999999999999999754322  2235566666655 4778888889999999999999999999


Q ss_pred             HHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHH
Q 019060          257 LMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      +++....+.||+++++.+|+.|+++.+.+..|.+.++...+.. ........|++|+++.|||.|+++++++|+++++|+
T Consensus       251 ~~~~~~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~-~~~~~~~~d~sk~~~~lgw~p~~~l~e~i~~~~~~~  329 (370)
T PLN02695        251 LTKSDFREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP-EGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWI  329 (370)
T ss_pred             HHhccCCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC-CCccccccCHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            8887667899999999999999999999999976666554432 223345689999999999999999999999999999


Q ss_pred             HHhhcCC
Q 019060          337 RLRLAVP  343 (346)
Q Consensus       337 ~~~~~~~  343 (346)
                      ++.....
T Consensus       330 ~~~~~~~  336 (370)
T PLN02695        330 KEQIEKE  336 (370)
T ss_pred             HHHHHhh
Confidence            8876543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=2.4e-42  Score=334.11  Aligned_cols=306  Identities=30%  Similarity=0.503  Sum_probs=243.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~  103 (346)
                      .+|+|||||||||||++|+++|+++ | |+|++++|.....    .......+++++.+|+++..      ..++|+|||
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g-~~V~~l~r~~~~~----~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViH  388 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDN-YEVYGLDIGSDAI----SRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLP  388 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCC-cEEEEEeCCchhh----hhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEE
Confidence            4789999999999999999999986 6 9999999854221    12223346899999998742      237999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCC-CCCC-CCCCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGN-VNPI-GVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~-~~~~-~~~~~Y~~sK~  181 (346)
                      +|+...+.....++...++.|+.++.+++++|++.+.+|||+||..+||.....+.+|+.+.. ..+. .|.+.|+.+|.
T Consensus       389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~  468 (660)
T PRK08125        389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQ  468 (660)
T ss_pred             CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHH
Confidence            999776555566788889999999999999999988899999999999976555677774321 0122 34567999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCC------CccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      ++|.+++.+++.++++++++||+++|||+....      ...+++.++..+..++++.+.+++++.++|+|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~  548 (660)
T PRK08125        469 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALF  548 (660)
T ss_pred             HHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHH
Confidence            999999999888899999999999999975321      13567888888888888888888889999999999999999


Q ss_pred             HHHhCCC----CCcEEecCCC-CCCHHHHHHHHHHHcCCCc-ceEEccC--------------CCCCCCcccCChHHHHh
Q 019060          256 RLMEGEN----TGPINIGNPG-EFTMLELAENVKELINPNV-EITMVEN--------------TPDDPRQRKPDITKATE  315 (346)
Q Consensus       256 ~~~~~~~----~~~~~~~~~~-~~s~~ei~~~i~~~~g~~~-~~~~~~~--------------~~~~~~~~~~~~~k~~~  315 (346)
                      .++++..    +++||+++++ .+|+.|+++.+.+.+|... .+...+.              .........+|++|+++
T Consensus       549 ~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~  628 (660)
T PRK08125        549 RIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARR  628 (660)
T ss_pred             HHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccccccccccCCChHHHHH
Confidence            9998642    4589999985 7999999999999998532 1111110              00122345579999999


Q ss_pred             hcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          316 LLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       316 ~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      .|||.|+++++|+|+++++||++...
T Consensus       629 ~LGw~P~~~lee~l~~~i~~~~~~~~  654 (660)
T PRK08125        629 LLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHhccc
Confidence            99999999999999999999987754

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=8.1e-42  Score=308.18  Aligned_cols=302  Identities=25%  Similarity=0.326  Sum_probs=237.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      ++|+||||||+||||+++++.|+++| ++|++++|................++.++.+|+.+.+..       ++|+|||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih   81 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELG-AEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH   81 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCC-CEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence            46899999999999999999999999 999999986543222111111123577899999986532       5899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCC-CCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      +|+.........++...+++|+.++.+++++|++.+ + +||++||..+|+... ..+.+|+     .+..|.++|+.+|
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~-----~~~~p~~~Y~~sK  156 (349)
T TIGR02622        82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRET-----DPLGGHDPYSSSK  156 (349)
T ss_pred             CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccC-----CCCCCCCcchhHH
Confidence            998655444556788899999999999999998876 5 899999999998643 2345565     4566778899999


Q ss_pred             HHHHHHHHHHHHHh-------CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          181 RVAETLMFDYHRQH-------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       181 ~~~E~~~~~~~~~~-------~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      .++|.+++.+++..       +++++++||+++|||+... ...+++.++..+..++.+.+ +++++.++|+|++|+|++
T Consensus       157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~-~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a  234 (349)
T TIGR02622       157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA-EDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSG  234 (349)
T ss_pred             HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch-hhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHH
Confidence            99999999887654       7999999999999997421 24678888888888888776 567889999999999999


Q ss_pred             HHHHHhCC------CCCcEEecCC--CCCCHHHHHHHHHHHcCC-CcceEEc--cCCCCCCCcccCChHHHHhhcCCccc
Q 019060          254 LIRLMEGE------NTGPINIGNP--GEFTMLELAENVKELINP-NVEITMV--ENTPDDPRQRKPDITKATELLGWEPK  322 (346)
Q Consensus       254 i~~~~~~~------~~~~~~~~~~--~~~s~~ei~~~i~~~~g~-~~~~~~~--~~~~~~~~~~~~~~~k~~~~lg~~p~  322 (346)
                      ++.++++.      .++.||++++  ++++..|+++.+.+.++. +..+...  +..+........|++|++++|||+|+
T Consensus       235 ~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~  314 (349)
T TIGR02622       235 YLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLLGWHPR  314 (349)
T ss_pred             HHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHhCCCCC
Confidence            99877641      2579999974  789999999999988753 3334332  12233344566799999999999999


Q ss_pred             ccHHhHHHHHHHHHHHhh
Q 019060          323 IKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       323 ~~~~e~i~~~~~~~~~~~  340 (346)
                      ++++++|+++++|+++..
T Consensus       315 ~~l~~gi~~~i~w~~~~~  332 (349)
T TIGR02622       315 WGLEEAVSRTVDWYKAWL  332 (349)
T ss_pred             CCHHHHHHHHHHHHHHHh
Confidence            999999999999997653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.6e-43  Score=285.67  Aligned_cols=301  Identities=27%  Similarity=0.453  Sum_probs=257.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeC-CCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN-YFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      +++|||||.||||++.+..+....+ +..+.++. ..-.....+++....++.+++++|+.+...+       ++|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            7999999999999999999998753 34444332 2222344555566678999999999987433       6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCC-CCCcCCCCCCCCCCchHHhH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQD-ESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~-e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      .|+..+...+..++......|+.++..++++++..|.  +|||+||..|||+..+.... |.     +++.|.++|+.+|
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~-----s~~nPtnpyAasK  161 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEA-----SLLNPTNPYAASK  161 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccc-----ccCCCCCchHHHH
Confidence            9998887777888888999999999999999999974  79999999999987655544 65     6888999999999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      +++|.+++++.+.++++++++|.++||||++.+  ...++.++.....+++..+.+++.+.++|+|++|+++++..++++
T Consensus       162 aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~--~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K  239 (331)
T KOG0747|consen  162 AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYP--EKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK  239 (331)
T ss_pred             HHHHHHHHHHhhccCCcEEEEeccCccCCCcCh--HHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc
Confidence            999999999999999999999999999998653  457888888888899999999999999999999999999999998


Q ss_pred             CC-CCcEEecCCCCCCHHHHHHHHHHHcCCC-------cceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          261 EN-TGPINIGNPGEFTMLELAENVKELINPN-------VEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       261 ~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      .. +++||++..+.++..|+++.+.+.+...       ..+..++..+....+..++.+|++ .|||+|+++++++++.+
T Consensus       240 g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~LGw~~~~p~~eGLrkt  318 (331)
T KOG0747|consen  240 GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KLGWRPTTPWEEGLRKT  318 (331)
T ss_pred             CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-hcCCcccCcHHHHHHHH
Confidence            77 7899999999999999999999988752       334566777777778899999998 79999999999999999


Q ss_pred             HHHHHHhhc
Q 019060          333 EDDFRLRLA  341 (346)
Q Consensus       333 ~~~~~~~~~  341 (346)
                      ++||.++.+
T Consensus       319 ie~y~~~~~  327 (331)
T KOG0747|consen  319 IEWYTKNFK  327 (331)
T ss_pred             HHHHHhhhc
Confidence            999988763

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=6.9e-42  Score=309.38  Aligned_cols=299  Identities=28%  Similarity=0.435  Sum_probs=234.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+|||||||||||++|+++|+++| +. |+++++... .............++.++.+|+.+.+..       ++|+|||
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNT-QDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhC-CCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            689999999999999999999999 54 555555321 1111121111124578899999987432       5899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEecccccCCCCC----------CCCCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSEVYGDPLV----------HPQDESY  163 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~-r~i~~SS~~v~~~~~~----------~~~~e~~  163 (346)
                      +|+..........+...+++|+.++.+++++|++.         ++ +||++||.++|+....          .+++|+ 
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~-  158 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET-  158 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc-
Confidence            99876443344567889999999999999999874         34 8999999999985311          124454 


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                          ++..|.+.|+.+|.++|.+++.+++..+++++++|++.+|||+...  ..+++.++..+..++.+.++++++..++
T Consensus       159 ----~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~  232 (352)
T PRK10084        159 ----TAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRD  232 (352)
T ss_pred             ----CCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCeEEeCCCCeEEe
Confidence                5667888999999999999999988889999999999999997532  3567777777787888888888889999


Q ss_pred             cccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcce--------EEccCCCCCCCcccCChHHHH
Q 019060          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEI--------TMVENTPDDPRQRKPDITKAT  314 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~--------~~~~~~~~~~~~~~~~~~k~~  314 (346)
                      |+|++|+|+++..+++.+. ++.||+++++.+|+.|+++.+.+.+|...+.        ...+..+.......+|++|++
T Consensus       233 ~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (352)
T PRK10084        233 WLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKIS  312 (352)
T ss_pred             eEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHH
Confidence            9999999999999888654 6799999999999999999999999853211        111222333344568999999


Q ss_pred             hhcCCcccccHHhHHHHHHHHHHHh
Q 019060          315 ELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       315 ~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      +.|||+|+++++++|+++++||+++
T Consensus       313 ~~lg~~p~~~l~~~l~~~~~~~~~~  337 (352)
T PRK10084        313 RELGWKPQETFESGIRKTVEWYLAN  337 (352)
T ss_pred             HHcCCCCcCCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=2.7e-41  Score=305.62  Aligned_cols=305  Identities=24%  Similarity=0.348  Sum_probs=238.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch---hhhhc--CCCCeeEEecccCCcccC-------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWI--GHPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~d~~~~~~~-------~   97 (346)
                      .++|+|||||||||||++|+++|+++| ++|++++|........   .....  ...++.++.+|+.+....       +
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~   81 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAG-YKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR   81 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence            346899999999999999999999999 9999998753222111   11111  123678899999987432       6


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      +|+|||+|+.........++...++.|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..|.+.|
T Consensus        82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~~~~~Y  156 (352)
T PLN02240         82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEE-----FPLSATNPY  156 (352)
T ss_pred             CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCCHH
Confidence            8999999986543344467788999999999999999999886 8999999999987666677887     566777899


Q ss_pred             HHhHHHHHHHHHHHHHH-hCCceEEEEeccccCCCCCCC-------CccHHHHHHHHHHcCC--CeEEec------CCcc
Q 019060          177 DEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIRGE--PLTVQA------PGTQ  240 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~------~~~~  240 (346)
                      +.+|..+|.+++.++.. .+++++++|++++||++....       ....+..++..+..++  .+.+++      ++..
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  236 (352)
T PLN02240        157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG  236 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence            99999999999988654 478899999999999753210       0112223444444443  344444      5678


Q ss_pred             eeecccHHHHHHHHHHHHhCC----C--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHH
Q 019060          241 TRSFCYVSDMVDGLIRLMEGE----N--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKAT  314 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~----~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~  314 (346)
                      .++|+|++|+|++++.++...    .  +++||+++++++|+.|+++.+.+.+|.+.++...+..+........|++|++
T Consensus       237 ~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~  316 (352)
T PLN02240        237 VRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAE  316 (352)
T ss_pred             EEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHHHH
Confidence            899999999999998887532    2  4699999999999999999999999988777766665555555667999999


Q ss_pred             hhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          315 ELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       315 ~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      ++|||+|+++++|+|+++++|++++.
T Consensus       317 ~~lg~~p~~~l~~~l~~~~~~~~~~~  342 (352)
T PLN02240        317 KELGWKAKYGIDEMCRDQWNWASKNP  342 (352)
T ss_pred             HHhCCCCCCCHHHHHHHHHHHHHhCc
Confidence            99999999999999999999998764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=2.6e-41  Score=328.65  Aligned_cols=301  Identities=28%  Similarity=0.434  Sum_probs=241.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC-CCeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g-~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi  102 (346)
                      .|+|||||||||||++|+++|+++| .++|++++|... .....+.......+++++.+|+.+...       .++|+||
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi   85 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM   85 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence            5899999999999999999999984 288999987421 111111111123478999999998542       3699999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCC---CCCCCcCCCCCCCCCCchH
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHP---QDESYWGNVNPIGVRSCYD  177 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~---~~e~~~~~~~~~~~~~~Y~  177 (346)
                      |+|+.........++...++.|+.++.+++++|++.+ + ||||+||..+||.....+   ..|+     .+..|.+.|+
T Consensus        86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~-----~~~~p~~~Y~  160 (668)
T PLN02260         86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEA-----SQLLPTNPYS  160 (668)
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCcccc-----CCCCCCCCcH
Confidence            9999765444445677888999999999999999987 5 899999999998654322   2343     4566778899


Q ss_pred             HhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHH
Q 019060          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       178 ~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      .+|..+|.+++.+.+..+++++++||+++|||+...  ..+++.++..+..++.+.+.++++..++|+|++|+|++++.+
T Consensus       161 ~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~  238 (668)
T PLN02260        161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFP--EKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV  238 (668)
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCc--ccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence            999999999999988889999999999999997532  356777888888888888888888999999999999999999


Q ss_pred             HhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc--eEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHH
Q 019060          258 MEGEN-TGPINIGNPGEFTMLELAENVKELINPNVE--ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMED  334 (346)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~  334 (346)
                      +++.. +++||+++++.+++.|+++.+.+.+|.+..  +...+..+.......+|++|++ .|||+|+++++|+++++++
T Consensus       239 l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~-~lGw~p~~~~~egl~~~i~  317 (668)
T PLN02260        239 LHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLK-KLGWQERTSWEEGLKKTME  317 (668)
T ss_pred             HhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHH-HcCCCCCCCHHHHHHHHHH
Confidence            87665 679999999999999999999999997643  3333434444445668999997 5999999999999999999


Q ss_pred             HHHHhh
Q 019060          335 DFRLRL  340 (346)
Q Consensus       335 ~~~~~~  340 (346)
                      ||+++.
T Consensus       318 w~~~~~  323 (668)
T PLN02260        318 WYTSNP  323 (668)
T ss_pred             HHHhCh
Confidence            998653

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=5.9e-41  Score=301.00  Aligned_cols=297  Identities=21%  Similarity=0.290  Sum_probs=223.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch-hhhhcC-CCCeeEEecccCCcccC-----CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN-LRKWIG-HPRFELIRHDVTEPLLI-----EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~d~~~~~~~-----~~d~vi~  103 (346)
                      ++|+||||||+||||++|+++|+++| ++|++++|+....... ...+.. ..++.++.+|+.+....     ++|+|||
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   87 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERG-YTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH   87 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence            46799999999999999999999999 9999999864321111 111111 13578899999986433     6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecc-cccCCCCC---CCCCCCCcCCCC-CCCCCCchH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS-EVYGDPLV---HPQDESYWGNVN-PIGVRSCYD  177 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~-~v~~~~~~---~~~~e~~~~~~~-~~~~~~~Y~  177 (346)
                      +|+..     ..++...++.|+.++.+++++|++.++ |||++||. .+||....   .+++|+.|.+.+ +..|.+.|+
T Consensus        88 ~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~  162 (342)
T PLN02214         88 TASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYC  162 (342)
T ss_pred             ecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHH
Confidence            99864     245778899999999999999999887 89999996 58875332   246777654322 344667899


Q ss_pred             HhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHH
Q 019060          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       178 ~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      .+|..+|.+++.+.++.+++++++||+++|||+........+..++ ..+.+.... .  ++..++|+|++|+|++++.+
T Consensus       163 ~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~a  238 (342)
T PLN02214        163 YGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLV  238 (342)
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-C--CCCCcCeeEHHHHHHHHHHH
Confidence            9999999999999888899999999999999986433222233333 334454432 2  24568999999999999999


Q ss_pred             HhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC-CcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHH
Q 019060          258 MEGEN-TGPINIGNPGEFTMLELAENVKELINP-NVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD  335 (346)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~  335 (346)
                      ++++. .|.||+++ +.+++.|+++.+.+.++. +.+....+..+.......+|++|++ +|||+|. +++|+|+++++|
T Consensus       239 l~~~~~~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~LG~~p~-~lee~i~~~~~~  315 (342)
T PLN02214        239 YEAPSASGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIK-DLGLEFT-STKQSLYDTVKS  315 (342)
T ss_pred             HhCcccCCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHH-HcCCccc-CHHHHHHHHHHH
Confidence            98765 67999987 678999999999999863 2222222222233344568999997 5999995 999999999999


Q ss_pred             HHHhh
Q 019060          336 FRLRL  340 (346)
Q Consensus       336 ~~~~~  340 (346)
                      |++..
T Consensus       316 ~~~~~  320 (342)
T PLN02214        316 LQEKG  320 (342)
T ss_pred             HHHcC
Confidence            97653

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.5e-41  Score=295.84  Aligned_cols=272  Identities=19%  Similarity=0.158  Sum_probs=218.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+||||||+||||++|+++|++.| + |++++|..                ..+.+|+.|.+..       ++|+|||+|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~-V~~~~~~~----------------~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A   62 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-N-LIALDVHS----------------TDYCGDFSNPEGVAETVRKIRPDVIVNAA   62 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-C-EEEecccc----------------ccccCCCCCHHHHHHHHHhcCCCEEEECC
Confidence            689999999999999999999998 5 78887732                1235677776432       589999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      +......+..++...+.+|+.++.+++++|++.+++|||+||..||+.....+++|+     ++..|.+.|+.+|.++|+
T Consensus        63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~~~~~p~~E~-----~~~~P~~~Yg~sK~~~E~  137 (299)
T PRK09987         63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPGTGDIPWQET-----DATAPLNVYGETKLAGEK  137 (299)
T ss_pred             ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECCCCCCCcCCC-----CCCCCCCHHHHHHHHHHH
Confidence            987766666788888899999999999999999999999999999987766788887     677888899999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC--CcceeecccHHHHHHHHHHHHhCCC-
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP--GTQTRSFCYVSDMVDGLIRLMEGEN-  262 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~Dva~~i~~~~~~~~-  262 (346)
                      +++.+.    .+++|+|++++|||+.    .+++..++..+..++.+.++++  +...+.+.+++|++.++..++.... 
T Consensus       138 ~~~~~~----~~~~ilR~~~vyGp~~----~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~  209 (299)
T PRK09987        138 ALQEHC----AKHLIFRTSWVYAGKG----NNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV  209 (299)
T ss_pred             HHHHhC----CCEEEEecceecCCCC----CCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC
Confidence            987653    4689999999999963    3567778887778888888776  4444455667778888887776543 


Q ss_pred             CCcEEecCCCCCCHHHHHHHHHHHc---CCCc---ceEEcc-----CCCCCCCcccCChHHHHhhcCCcccccHHhHHHH
Q 019060          263 TGPINIGNPGEFTMLELAENVKELI---NPNV---EITMVE-----NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL  331 (346)
Q Consensus       263 ~~~~~~~~~~~~s~~ei~~~i~~~~---g~~~---~~~~~~-----~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~  331 (346)
                      .|+||+++++.+|+.|+++.+.+.+   |.+.   .+...+     .....+....+|++|+++.|||+|. +|+++|++
T Consensus       210 ~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~lg~~~~-~~~~~l~~  288 (299)
T PRK09987        210 AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQNFALVLP-DWQVGVKR  288 (299)
T ss_pred             CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHHhCCCCc-cHHHHHHH
Confidence            6899999999999999999998864   4332   222222     2233556778899999999999987 99999999


Q ss_pred             HHHHH
Q 019060          332 MEDDF  336 (346)
Q Consensus       332 ~~~~~  336 (346)
                      +++.+
T Consensus       289 ~~~~~  293 (299)
T PRK09987        289 MLTEL  293 (299)
T ss_pred             HHHHH
Confidence            99865

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.1e-40  Score=297.36  Aligned_cols=301  Identities=33%  Similarity=0.502  Sum_probs=239.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHL  104 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~  104 (346)
                      +||||||||+||++++++|++.|. ++|++++|... ...+........+++.++.+|+.+.+..       ++|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            589999999999999999999873 68888876421 1122222222234688899999987532       38999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEecccccCCCCCC-CCCCCCcCCCCCCCCCCchHHhHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYGDPLVH-PQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~r~i~~SS~~v~~~~~~~-~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      |+.........++...+++|+.++.+++++|.+.+  +++|++||..+||..... +.+|+     .+..|.+.|+.+|.
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~  155 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTET-----TPLAPSSPYSASKA  155 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCC-----CCCCCCCchHHHHH
Confidence            98765444456777889999999999999998863  489999999999865433 46666     46667788999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      .+|.+++.++.+.+++++++||+.+|||....  ..+++.++..+..++.+.++++++..++|+|++|+|+++..++++.
T Consensus       156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~  233 (317)
T TIGR01181       156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQFP--EKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG  233 (317)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeccccCCCCCc--ccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC
Confidence            99999999888889999999999999997532  4577888888888888888888888999999999999999999865


Q ss_pred             C-CCcEEecCCCCCCHHHHHHHHHHHcCCCcce-EEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHh
Q 019060          262 N-TGPINIGNPGEFTMLELAENVKELINPNVEI-TMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       262 ~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      . +++||+++++++++.|+++.+.+.+|.+..+ ...+..+........|++|+++.|||+|+++++++++++++||+++
T Consensus       234 ~~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~~~i~~~~~~~~~~  313 (317)
T TIGR01181       234 RVGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFEEGLRKTVQWYLDN  313 (317)
T ss_pred             CCCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhc
Confidence            5 5699999999999999999999999865332 2222222223334679999999999999989999999999999776


Q ss_pred             hc
Q 019060          340 LA  341 (346)
Q Consensus       340 ~~  341 (346)
                      .+
T Consensus       314 ~~  315 (317)
T TIGR01181       314 EW  315 (317)
T ss_pred             cC
Confidence            43

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=3.6e-40  Score=296.67  Aligned_cols=301  Identities=25%  Similarity=0.369  Sum_probs=232.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh--hcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK--WIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+|||||||||||++|+++|++.| ++|++++|...........  .....++.++.+|+.+....       ++|+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh   79 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIH   79 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCC-CeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence            689999999999999999999999 9999987643222221111  11223567889999887432       5899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC-CCCCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI-GVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~-~~~~~Y~~sK~  181 (346)
                      +|+..........+...+..|+.++.+++++|++.++ +||++||..+|+.....+++|+     ++. .|...|+.+|.
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~-----~~~~~p~~~Y~~sK~  154 (338)
T PRK10675         80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVES-----FPTGTPQSPYGKSKL  154 (338)
T ss_pred             CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccc-----cCCCCCCChhHHHHH
Confidence            9986543333455677889999999999999999887 8999999999987666667777     343 56788999999


Q ss_pred             HHHHHHHHHHHHh-CCceEEEEeccccCCCCCCC--------CccHHHHHHHHHHcCC--CeEEec------CCcceeec
Q 019060          182 VAETLMFDYHRQH-GIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAIRGE--PLTVQA------PGTQTRSF  244 (346)
Q Consensus       182 ~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~  244 (346)
                      ++|++++.+++.. +++++++|++.+||+.....        ...++. ++..+..++  .+.+++      ++.+.++|
T Consensus       155 ~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (338)
T PRK10675        155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY  233 (338)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence            9999999987653 78999999999999742111        112333 333344332  244433      46778999


Q ss_pred             ccHHHHHHHHHHHHhCC---C-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCc
Q 019060          245 CYVSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWE  320 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~---~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  320 (346)
                      +|++|+|++++.+++..   . .++||+++++.+|+.|+++.+.+.+|.+..+...+...........|++|+++.+||+
T Consensus       234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  313 (338)
T PRK10675        234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWR  313 (338)
T ss_pred             EEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHhCCC
Confidence            99999999999988742   2 4689999999999999999999999988777665555545556678999999999999


Q ss_pred             ccccHHhHHHHHHHHHHHhh
Q 019060          321 PKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       321 p~~~~~e~i~~~~~~~~~~~  340 (346)
                      |+++++++++++++|++++.
T Consensus       314 p~~~~~~~~~~~~~~~~~~~  333 (338)
T PRK10675        314 VTRTLDEMAQDTWHWQSRHP  333 (338)
T ss_pred             CcCcHHHHHHHHHHHHHhhh
Confidence            99999999999999998753

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=1.5e-40  Score=295.22  Aligned_cols=284  Identities=21%  Similarity=0.273  Sum_probs=213.6

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc---c-----------cCCCCE
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---L-----------LIEVDQ  100 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~-----------~~~~d~  100 (346)
                      ||||||+||||++|+++|++.| ++++++.|+..... ...        .+.++|+.|.   .           ..++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g-~~~v~~~~~~~~~~-~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGT-KFV--------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCC-CceEEEecCCCcch-HHH--------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            8999999999999999999999 87666555432111 100        1112222221   0           126899


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      |||+|+.....  ..++...++.|+.++.+++++|++.+++|||+||.++|+.....+.+|+     ++..|.+.|+.+|
T Consensus        72 Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK  144 (308)
T PRK11150         72 IFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEER-----EYEKPLNVYGYSK  144 (308)
T ss_pred             EEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccC-----CCCCCCCHHHHHH
Confidence            99999854432  2345567899999999999999999889999999999997655556665     4666778899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEe-cCCcceeecccHHHHHHHHHHH
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQ-APGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      .++|++++.+....+++++++||+++|||+.....  ..++..+...+..++...++ ++++..++|+|++|+|++++.+
T Consensus       145 ~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~  224 (308)
T PRK11150        145 FLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWF  224 (308)
T ss_pred             HHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHH
Confidence            99999999998878999999999999999864321  23344555667777665444 4556789999999999999999


Q ss_pred             HhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCCCcccCChHHHHhhcCCcccc-cHHhHHHHH
Q 019060          258 MEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDPRQRKPDITKATELLGWEPKI-KLRDGLPLM  332 (346)
Q Consensus       258 ~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~  332 (346)
                      ++....++||+++++.+|+.|+++.+.+.+|.. .+...+...    ........|++|+++ +||+|+. +++++|+++
T Consensus       225 ~~~~~~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~-~g~~p~~~~~~~gl~~~  302 (308)
T PRK11150        225 WENGVSGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRA-AGYDKPFKTVAEGVAEY  302 (308)
T ss_pred             HhcCCCCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHh-cCCCCCCCCHHHHHHHH
Confidence            887667899999999999999999999999853 222222111    111234679999986 7999874 999999999


Q ss_pred             HHHHH
Q 019060          333 EDDFR  337 (346)
Q Consensus       333 ~~~~~  337 (346)
                      ++|+.
T Consensus       303 ~~~~~  307 (308)
T PRK11150        303 MAWLN  307 (308)
T ss_pred             HHHhh
Confidence            99975

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=1.8e-40  Score=294.55  Aligned_cols=287  Identities=26%  Similarity=0.332  Sum_probs=224.7

Q ss_pred             EEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEcccCC
Q 019060           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLACPA  108 (346)
Q Consensus        36 lItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a~~~  108 (346)
                      ||||||||||++|++.|++.| +.|+++.+..                   .+|+.+...       .++|+|||+|+..
T Consensus         1 lItGa~GfiG~~l~~~L~~~g-~~v~~~~~~~-------------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~   60 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALG-FTNLVLRTHK-------------------ELDLTRQADVEAFFAKEKPTYVILAAAKV   60 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCC-CcEEEeeccc-------------------cCCCCCHHHHHHHHhccCCCEEEEeeeee
Confidence            699999999999999999999 7776654311                   355555432       2589999999875


Q ss_pred             Ccc-ccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC-chHHhHHHHHH
Q 019060          109 SPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKRVAET  185 (346)
Q Consensus       109 ~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~~E~  185 (346)
                      +.. ....++...++.|+.++.+++++|++.++ +|||+||..||+.....+.+|+++.. .+..|.+ .|+.+|.++|+
T Consensus        61 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~~e~  139 (306)
T PLN02725         61 GGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLT-GPPEPTNEWYAIAKIAGIK  139 (306)
T ss_pred             cccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhcc-CCCCCCcchHHHHHHHHHH
Confidence            421 23356778889999999999999999987 89999999999976677788875432 1344433 49999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHH----HHHcCCCeEE-ecCCcceeecccHHHHHHHHHHHH
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIA----QAIRGEPLTV-QAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      +++.+.+..+++++++||+.+|||+....  ...+++.++.    ....+.++.+ ++++...++|+|++|++++++.++
T Consensus       140 ~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~  219 (306)
T PLN02725        140 MCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLM  219 (306)
T ss_pred             HHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHH
Confidence            99988888899999999999999975321  1234444443    3345555554 677888899999999999999999


Q ss_pred             hCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          259 EGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       259 ~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      +... .+.||+++++.+|+.|+++.+.+.+|.+..+...+..+.......+|++|++ .|||+|+++++++++++++|++
T Consensus       220 ~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~  298 (306)
T PLN02725        220 RRYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLR-SLGWDPKFSLKDGLQETYKWYL  298 (306)
T ss_pred             hccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHH-HhCCCCCCCHHHHHHHHHHHHH
Confidence            8654 5789999999999999999999999977666554433333445678999996 5999999999999999999999


Q ss_pred             HhhcCCC
Q 019060          338 LRLAVPR  344 (346)
Q Consensus       338 ~~~~~~~  344 (346)
                      ++...+-
T Consensus       299 ~~~~~~~  305 (306)
T PLN02725        299 ENYETGG  305 (306)
T ss_pred             hhhhccC
Confidence            9887653

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.6e-39  Score=289.40  Aligned_cols=299  Identities=19%  Similarity=0.228  Sum_probs=221.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---C-CCCeeEEecccCCcccC-----CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPLLI-----EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~~-----~~d~v  101 (346)
                      .+|+||||||+||||++|+++|++.| ++|+++.|....... .....   . ..++.++.+|+++....     ++|+|
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v   81 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRG-YTINATVRDPKDRKK-TDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETV   81 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEcCCcchhh-HHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEE
Confidence            36899999999999999999999999 999888876432211 11111   1 23688899999987533     69999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCC-----CCCCCCCCcCCCCC-CCCC
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPL-----VHPQDESYWGNVNP-IGVR  173 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~~~~-----~~~~~e~~~~~~~~-~~~~  173 (346)
                      ||+||..........+...++.|+.++.+++++|.+. ++ +||++||..+|+...     ..+.+|+.+..+.. ..+.
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~  161 (325)
T PLN02989         82 FHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERK  161 (325)
T ss_pred             EEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccc
Confidence            9999865433334456778899999999999999875 44 899999988765432     23466764322111 1224


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      +.|+.+|.++|.+++.+.+.++++++++||+++|||+..+.. .+...++..++.++...  +  ...++|+|++|+|++
T Consensus       162 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~-~~~~~~i~~~~~~~~~~--~--~~~r~~i~v~Dva~a  236 (325)
T PLN02989        162 QWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL-NFSVAVIVELMKGKNPF--N--TTHHRFVDVRDVALA  236 (325)
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC-CchHHHHHHHHcCCCCC--C--CcCcCeeEHHHHHHH
Confidence            679999999999999998888999999999999999865432 24445555666665432  2  244789999999999


Q ss_pred             HHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC--CCCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVEN--TPDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~--~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      ++.+++.+. .+.||++ ++.+|+.|+++.+.+.++.. .+...+.  ..........|++|+++ |||.|+++++|+|+
T Consensus       237 ~~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~l~~gi~  313 (325)
T PLN02989        237 HVKALETPSANGRYIID-GPVVTIKDIENVLREFFPDL-CIADRNEDITELNSVTFNVCLDKVKS-LGIIEFTPTETSLR  313 (325)
T ss_pred             HHHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCC-CCCCCCCCcccccccCcCCCHHHHHH-cCCCCCCCHHHHHH
Confidence            999998765 6799995 56899999999999999732 2111111  01112345778999886 99999999999999


Q ss_pred             HHHHHHHHh
Q 019060          331 LMEDDFRLR  339 (346)
Q Consensus       331 ~~~~~~~~~  339 (346)
                      ++++||++.
T Consensus       314 ~~~~~~~~~  322 (325)
T PLN02989        314 DTVLSLKEK  322 (325)
T ss_pred             HHHHHHHHh
Confidence            999999654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.6e-39  Score=292.31  Aligned_cols=306  Identities=21%  Similarity=0.228  Sum_probs=215.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .+|+||||||+||||++++++|+++| ++|++++|+..........+....++.++.+|+.+...     .++|+|||+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRG-YTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            47899999999999999999999999 99999888542221111111122468899999998642     2699999999


Q ss_pred             cCCCccc--cccChHH-----HHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCC-----CCCCCCCcCCCC---
Q 019060          106 CPASPIF--YKYNPVK-----TIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLV-----HPQDESYWGNVN---  168 (346)
Q Consensus       106 ~~~~~~~--~~~~~~~-----~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~-----~~~~e~~~~~~~---  168 (346)
                      +......  ...++..     .++.|+.++.+++++|++.+ + +||++||..+||....     .+++|+.+.+.+   
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~  167 (353)
T PLN02896         88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW  167 (353)
T ss_pred             ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence            9765332  2234443     34556799999999998875 5 8999999999985321     345565322111   


Q ss_pred             -CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeE--EecCC---ccee
Q 019060          169 -PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT--VQAPG---TQTR  242 (346)
Q Consensus       169 -~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~  242 (346)
                       +..+..+|+.+|.++|.++..+++.++++++++||+++|||+.......++..++. ...|....  ..+..   ...+
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  246 (353)
T PLN02896        168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLS-PITGDSKLFSILSAVNSRMGSI  246 (353)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHH-HhcCCccccccccccccccCce
Confidence             12244579999999999999999888999999999999999764332233333332 22343221  11111   1236


Q ss_pred             ecccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCC-cceEEccCCCCCCCcccCChHHHHhhcCCc
Q 019060          243 SFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPN-VEITMVENTPDDPRQRKPDITKATELLGWE  320 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  320 (346)
                      +|+|++|+|++++.+++.+. .+.|+ ++++++++.|+++.+.+.++.. ..+...+...... ....|.++++ .|||+
T Consensus       247 dfi~v~Dva~a~~~~l~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~lGw~  323 (353)
T PLN02896        247 ALVHIEDICDAHIFLMEQTKAEGRYI-CCVDSYDMSELINHLSKEYPCSNIQVRLDEEKRGSI-PSEISSKKLR-DLGFE  323 (353)
T ss_pred             eEEeHHHHHHHHHHHHhCCCcCccEE-ecCCCCCHHHHHHHHHHhCCCCCccccccccccCcc-ccccCHHHHH-HcCCC
Confidence            99999999999999998765 56775 4568899999999999999732 2223222222222 2356888886 59999


Q ss_pred             ccccHHhHHHHHHHHHHHhhc
Q 019060          321 PKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       321 p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      |+++++++|+++++||+++.-
T Consensus       324 p~~~l~~~i~~~~~~~~~~~~  344 (353)
T PLN02896        324 YKYGIEEIIDQTIDCCVDHGF  344 (353)
T ss_pred             ccCCHHHHHHHHHHHHHHCCC
Confidence            999999999999999987753

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=8.6e-41  Score=291.63  Aligned_cols=267  Identities=28%  Similarity=0.390  Sum_probs=204.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a  105 (346)
                      ||||||||+|+||++|++.|.+.| ++|+.++|.                    ..|+.+.+.       .++|+|||+|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~-~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~a   59 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERG-YEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCA   59 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTS-EEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCC-CEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccc
Confidence            899999999999999999999988 999998774                    345555422       2699999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      +...+..++.++...+.+|+.++.+++++|.+.+.++||+||..||++....+++|+     +++.|.+.||.+|.++|+
T Consensus        60 a~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~-----d~~~P~~~YG~~K~~~E~  134 (286)
T PF04321_consen   60 AYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTED-----DPPNPLNVYGRSKLEGEQ  134 (286)
T ss_dssp             ----HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TT-----S----SSHHHHHHHHHHH
T ss_pred             eeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccC-----CCCCCCCHHHHHHHHHHH
Confidence            998888889999999999999999999999999999999999999998888888998     788899999999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCC--
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT--  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~--  263 (346)
                      .++..    ..+++|+|++.+||+.    ..+++..++..+..++.+.+..  +..+++++++|+|+++..++++...  
T Consensus       135 ~v~~~----~~~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~--d~~~~p~~~~dlA~~i~~l~~~~~~~~  204 (286)
T PF04321_consen  135 AVRAA----CPNALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFD--DQYRSPTYVDDLARVILELIEKNLSGA  204 (286)
T ss_dssp             HHHHH-----SSEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEES--SCEE--EEHHHHHHHHHHHHHHHHH-G
T ss_pred             HHHHh----cCCEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeC--CceeCCEEHHHHHHHHHHHHHhccccc
Confidence            99763    3479999999999993    4578888888888899888754  5788999999999999999987665  


Q ss_pred             ---CcEEecCCCCCCHHHHHHHHHHHcCCCc-ceEEccC-----CCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHH
Q 019060          264 ---GPINIGNPGEFTMLELAENVKELINPNV-EITMVEN-----TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMED  334 (346)
Q Consensus       264 ---~~~~~~~~~~~s~~ei~~~i~~~~g~~~-~~~~~~~-----~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~  334 (346)
                         |+||+++++.+|+.|+++.+.+.+|.+. .+...+.     ....+....+|++|+++.||+++. +|+++++++++
T Consensus       205 ~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~-~~~~~l~~~~~  283 (286)
T PF04321_consen  205 SPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP-PWREGLEELVK  283 (286)
T ss_dssp             GG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----BHHHHHHHHHH
T ss_pred             ccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-CHHHHHHHHHH
Confidence               9999999999999999999999999876 4443321     233455678899999999999998 99999999998


Q ss_pred             HH
Q 019060          335 DF  336 (346)
Q Consensus       335 ~~  336 (346)
                      .|
T Consensus       284 ~~  285 (286)
T PF04321_consen  284 QY  285 (286)
T ss_dssp             HH
T ss_pred             Hh
Confidence            76

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=3.9e-39  Score=289.67  Aligned_cols=300  Identities=20%  Similarity=0.262  Sum_probs=218.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch--hhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      +|+||||||+||||++|+++|++.| ++|+++.|........  .......+++.++.+|+.+...     .++|+|||+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   87 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKG-YAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV   87 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence            6899999999999999999999999 9999888864321110  1111112358899999998753     369999999


Q ss_pred             ccCCCccccccChH-HHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCC----CCCCCCCCcCCC----CCCCCC
Q 019060          105 ACPASPIFYKYNPV-KTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPL----VHPQDESYWGNV----NPIGVR  173 (346)
Q Consensus       105 a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~~~~----~~~~~e~~~~~~----~~~~~~  173 (346)
                      |+...  ....++. ..++.|+.++.++++++.+. ++ +||++||..+|+...    +.+.+|+.+...    .+..|.
T Consensus        88 A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~  165 (338)
T PLN00198         88 ATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPT  165 (338)
T ss_pred             CCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCcc
Confidence            98542  2223343 46789999999999999886 45 899999999998532    334566543210    123466


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEec-CCc----ceeecccHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA-PGT----QTRSFCYVS  248 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~v~v~  248 (346)
                      ++|+.+|.++|.+++.+++..+++++++||+++|||+........+. ++..+..++.+.+.+ .+.    ..++|+|++
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~  244 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVE  244 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHH
Confidence            78999999999999999888899999999999999985432222332 333455666555433 121    236999999


Q ss_pred             HHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC-CcceEEccCCCCCCCcccCChHHHHhhcCCcccccHH
Q 019060          249 DMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP-NVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR  326 (346)
Q Consensus       249 Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  326 (346)
                      |+|++++.+++.+. .+.| +++++.+++.|+++.+.+.++. +.+..... .+ .......|.+|+++ +||+|+++++
T Consensus       245 D~a~a~~~~~~~~~~~~~~-~~~~~~~s~~el~~~i~~~~~~~~~~~~~~~-~~-~~~~~~~~~~k~~~-~G~~p~~~l~  320 (338)
T PLN00198        245 DVCRAHIFLAEKESASGRY-ICCAANTSVPELAKFLIKRYPQYQVPTDFGD-FP-SKAKLIISSEKLIS-EGFSFEYGIE  320 (338)
T ss_pred             HHHHHHHHHhhCcCcCCcE-EEecCCCCHHHHHHHHHHHCCCCCCCccccc-cC-CCCccccChHHHHh-CCceecCcHH
Confidence            99999999998765 5677 5556789999999999998863 23222211 11 12345679999987 6999999999


Q ss_pred             hHHHHHHHHHHHh
Q 019060          327 DGLPLMEDDFRLR  339 (346)
Q Consensus       327 e~i~~~~~~~~~~  339 (346)
                      |+|+++++||+++
T Consensus       321 ~gi~~~~~~~~~~  333 (338)
T PLN00198        321 EIYDQTVEYFKAK  333 (338)
T ss_pred             HHHHHHHHHHHHc
Confidence            9999999999864

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1e-38  Score=286.04  Aligned_cols=300  Identities=28%  Similarity=0.450  Sum_probs=233.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a~  106 (346)
                      +||||||||+||+.++++|+++| ++|++++|................++..+.+|+.+....       ++|+|||+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag   79 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESG-HEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAG   79 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCC-CeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECcc
Confidence            58999999999999999999999 999888764332222222211112577889999987532       6999999999


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      .........++...+..|+.++.+++++|.+.++ ++|++||..+|+.....+++|+     ++..|...|+.+|..+|.
T Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~-----~~~~~~~~y~~sK~~~e~  154 (328)
T TIGR01179        80 LIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISED-----SPLGPINPYGRSKLMSER  154 (328)
T ss_pred             ccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCcccc-----CCCCCCCchHHHHHHHHH
Confidence            7644344456677889999999999999999886 8999999999987666667777     466677889999999999


Q ss_pred             HHHHHHHH-hCCceEEEEeccccCCCCCCC-------CccHHHHHHHHHH-cCCCeEEec------CCcceeecccHHHH
Q 019060          186 LMFDYHRQ-HGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAI-RGEPLTVQA------PGTQTRSFCYVSDM  250 (346)
Q Consensus       186 ~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~v~v~Dv  250 (346)
                      +++.+++. .+++++++||+.+||+.....       ...+++.+..... ....+...+      ++...++|+|++|+
T Consensus       155 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~  234 (328)
T TIGR01179       155 ILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDL  234 (328)
T ss_pred             HHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHH
Confidence            99998776 689999999999999864321       1234555554433 234444332      45667899999999


Q ss_pred             HHHHHHHHhCC----CCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCccccc-H
Q 019060          251 VDGLIRLMEGE----NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIK-L  325 (346)
Q Consensus       251 a~~i~~~~~~~----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~  325 (346)
                      +++++.++...    ..+.||+++++++|+.|+++.+.+.+|.+..+...+...........++++++++|||+|.++ +
T Consensus       235 a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~l  314 (328)
T TIGR01179       235 ADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRRPGDPASLVADASKIRRELGWQPKYTDL  314 (328)
T ss_pred             HHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCCCccccchhcchHHHHHHhCCCCCcchH
Confidence            99999988642    267999999999999999999999999887776655544444455679999999999999987 9


Q ss_pred             HhHHHHHHHHHHHh
Q 019060          326 RDGLPLMEDDFRLR  339 (346)
Q Consensus       326 ~e~i~~~~~~~~~~  339 (346)
                      +++++++++|++++
T Consensus       315 ~~~~~~~~~~~~~~  328 (328)
T TIGR01179       315 EIIIKTAWRWESRN  328 (328)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999998764

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-38  Score=282.81  Aligned_cols=297  Identities=38%  Similarity=0.553  Sum_probs=236.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CC-CEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EV-DQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~-d~vi~~a~  106 (346)
                      |+|||||||||||++|+++|++.| |+|++++|.........      .++.++.+|+++....     +. |+|||+|+
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa   73 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAG-HDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAA   73 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCC-CeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEccc
Confidence            459999999999999999999999 99999999654332221      4678888888876332     34 99999999


Q ss_pred             CCCcccccc-ChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          107 PASPIFYKY-NPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       107 ~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ......... ++...+..|+.++.+++++|++.++ +|||.||.++++.. ...+.+|+.    .+..|.++|+.+|.++
T Consensus        74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~----~~~~p~~~Yg~sK~~~  149 (314)
T COG0451          74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL----GPPRPLNPYGVSKLAA  149 (314)
T ss_pred             cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc----CCCCCCCHHHHHHHHH
Confidence            776433333 4667899999999999999999777 89998888877754 233566663    2555556899999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCc-cHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      |+.+..+....+++++++||+.+|||+...... .+...++.....+.+ +...+++...++++|++|++++++.+++++
T Consensus       150 E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~  229 (314)
T COG0451         150 EQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP  229 (314)
T ss_pred             HHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCC
Confidence            999999988778999999999999998765422 355556666677776 566567777789999999999999999987


Q ss_pred             CCCcEEecCCC-CCCHHHHHHHHHHHcCCCcc-eEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          262 NTGPINIGNPG-EFTMLELAENVKELINPNVE-ITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       262 ~~~~~~~~~~~-~~s~~ei~~~i~~~~g~~~~-~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      ..+.||+++++ .+++.|+++.+.+.+|.... +...+  ...........|.+++++.|||.|+.++++++.++++|+.
T Consensus       230 ~~~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~~i~~~~~~~~  309 (314)
T COG0451         230 DGGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLL  309 (314)
T ss_pred             CCcEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence            75599999987 89999999999999998766 44444  2333444567899999999999999899999999999987


Q ss_pred             Hhh
Q 019060          338 LRL  340 (346)
Q Consensus       338 ~~~  340 (346)
                      ...
T Consensus       310 ~~~  312 (314)
T COG0451         310 KKL  312 (314)
T ss_pred             Hhh
Confidence            654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-38  Score=284.72  Aligned_cols=295  Identities=20%  Similarity=0.245  Sum_probs=216.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---C-CCCeeEEecccCCccc-----CCCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---G-HPRFELIRHDVTEPLL-----IEVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~-----~~~d~vi  102 (346)
                      +|+|||||||||||++|+++|+++| ++|++++|+..... ......   . .+++.++.+|+.+...     .++|+||
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vi   81 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRG-YTVKATVRDPNDPK-KTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVF   81 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCC-CEEEEEEcCCCchh-hHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEE
Confidence            5899999999999999999999999 99999988643211 111111   1 2468899999998753     3699999


Q ss_pred             EcccCCCccccccChH-HHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccc--cCCC---CCCCCCCCCcCCCC-CCCCC
Q 019060          103 HLACPASPIFYKYNPV-KTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEV--YGDP---LVHPQDESYWGNVN-PIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v--~~~~---~~~~~~e~~~~~~~-~~~~~  173 (346)
                      |+|+....  ...++. ..+++|+.++.+++++|.+. ++ ||||+||.++  |+..   ...+.+|+.+.... +....
T Consensus        82 h~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~  159 (322)
T PLN02662         82 HTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESK  159 (322)
T ss_pred             EeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhccc
Confidence            99986532  223443 77899999999999999887 66 8999999763  6532   12345665322110 01112


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      ..|+.+|..+|++++.+.+..+++++++||+++|||+.... ......++..+..+....    ++..++|+|++|+|++
T Consensus       160 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~i~v~Dva~a  234 (322)
T PLN02662        160 LWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPT-LNTSAEAILNLINGAQTF----PNASYRWVDVRDVANA  234 (322)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCC-CCchHHHHHHHhcCCccC----CCCCcCeEEHHHHHHH
Confidence            57999999999999999888899999999999999975432 123344455555554321    2456899999999999


Q ss_pred             HHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEE-ccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHH
Q 019060          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITM-VENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL  331 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~  331 (346)
                      ++.+++.+. .|.|++. ++.+++.|+++.+.+.++.. .+.. .............|++|+++ |||++. ++++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~~~-~~~~~l~~  310 (322)
T PLN02662        235 HIQAFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL-QLPEKCADDKPYVPTYQVSKEKAKS-LGIEFI-PLEVSLKD  310 (322)
T ss_pred             HHHHhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC-CCCCCCCCccccccccccChHHHHH-hCCccc-cHHHHHHH
Confidence            999998765 6789997 57899999999999998642 1111 01111233456789999985 999975 99999999


Q ss_pred             HHHHHHHh
Q 019060          332 MEDDFRLR  339 (346)
Q Consensus       332 ~~~~~~~~  339 (346)
                      +++||+++
T Consensus       311 ~~~~~~~~  318 (322)
T PLN02662        311 TVESLKEK  318 (322)
T ss_pred             HHHHHHHc
Confidence            99999765

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=1.7e-38  Score=282.94  Aligned_cols=289  Identities=24%  Similarity=0.288  Sum_probs=222.2

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc---------CCCCEEEEc
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYHL  104 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~d~vi~~  104 (346)
                      |||||||||||++++++|+++| + +|++++|....  ..+...    ....+..|+.+.+.         .++|+|||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g-~~~v~~~~~~~~~--~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERG-ITDILVVDNLRDG--HKFLNL----ADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcC-CceEEEEecCCCc--hhhhhh----hheeeeccCcchhHHHHHHhhccCCCCEEEEC
Confidence            6999999999999999999999 6 78888775321  111111    11234556655422         369999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      |+...  ....++...+++|+.++.+++++|++.+++||++||..+|+... .+..|+.    .+..|.+.|+.+|..+|
T Consensus        74 A~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~-~~~~e~~----~~~~p~~~Y~~sK~~~e  146 (314)
T TIGR02197        74 GACSD--TTETDGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGE-AGFREGR----ELERPLNVYGYSKFLFD  146 (314)
T ss_pred             ccccC--ccccchHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCC-CCccccc----CcCCCCCHHHHHHHHHH
Confidence            98654  33456778889999999999999999888999999999998653 3444542    23346788999999999


Q ss_pred             HHHHHHHH--HhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEe------cCCcceeecccHHHHHHHH
Q 019060          185 TLMFDYHR--QHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQ------APGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       185 ~~~~~~~~--~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~v~Dva~~i  254 (346)
                      .+++.+..  ..+++++++|++.+|||+....  ...++..++..+..+..+.++      ++++..++++|++|+++++
T Consensus       147 ~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i  226 (314)
T TIGR02197       147 QYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVN  226 (314)
T ss_pred             HHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHH
Confidence            99987543  2357899999999999985432  135667778777888777664      3466778999999999999


Q ss_pred             HHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCC----CCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          255 IRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD----DPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~----~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      +.++.....++||+++++++|+.|+++.+.+.+|.+.++...+....    ......+|++|+++.|||+|+++++|+++
T Consensus       227 ~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~p~~~l~~~l~  306 (314)
T TIGR02197       227 LWLLENGVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRAAGYYGPFTTLEEGVK  306 (314)
T ss_pred             HHHHhcccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHHhcCCCCcccHHHHHH
Confidence            99998855789999999999999999999999997654443332111    11234679999999999999999999999


Q ss_pred             HHHHHHH
Q 019060          331 LMEDDFR  337 (346)
Q Consensus       331 ~~~~~~~  337 (346)
                      ++++|+.
T Consensus       307 ~~~~~~~  313 (314)
T TIGR02197       307 DYVQWLL  313 (314)
T ss_pred             HHHHHHh
Confidence            9999974

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=2.6e-38  Score=285.70  Aligned_cols=298  Identities=21%  Similarity=0.292  Sum_probs=213.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccC-----CCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLI-----EVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~-----~~d~vi  102 (346)
                      .|+||||||+||||++|+++|+++| ++|++++|...... .......    ..++.++.+|+.+....     ++|+||
T Consensus         5 ~k~iLVTGatGfIGs~l~~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi   82 (351)
T PLN02650          5 KETVCVTGASGFIGSWLVMRLLERG-YTVRATVRDPANVK-KVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF   82 (351)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHCC-CEEEEEEcCcchhH-HHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence            5799999999999999999999999 99999988542221 1111111    12578899999987543     699999


Q ss_pred             EcccCCCccccccCh-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCC-CCCC-CCCCCcCCCC----CCCCC
Q 019060          103 HLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDP-LVHP-QDESYWGNVN----PIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~-~~~~-~~e~~~~~~~----~~~~~  173 (346)
                      |+|+....  ...++ ...+++|+.++.+++++|++.+ + ||||+||..+|+.. ...+ ++|+.+...+    +..+.
T Consensus        83 H~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~  160 (351)
T PLN02650         83 HVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG  160 (351)
T ss_pred             EeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence            99986532  12233 4678999999999999999876 5 89999999776543 2223 4666432211    12344


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      ++|+.+|..+|.+++.+++.++++++++||+++|||+..... ..++.. +. ...+..... .. ...++|+|++|+|+
T Consensus       161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~-~~-~~~~~~~~~-~~-~~~r~~v~V~Dva~  236 (351)
T PLN02650        161 WMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITA-LS-LITGNEAHY-SI-IKQGQFVHLDDLCN  236 (351)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHH-HH-HhcCCcccc-Cc-CCCcceeeHHHHHH
Confidence            579999999999999999888999999999999999754321 112221 11 123332221 21 23479999999999


Q ss_pred             HHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCC-cceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPN-VEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       253 ~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      +++.+++.+. .+.| +++++.+|+.|+++.+.+.++.. .+.. .+...........|+++++ .|||+|+++++++|+
T Consensus       237 a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k~~-~lG~~p~~~l~egl~  313 (351)
T PLN02650        237 AHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYNIPAR-FPGIDEDLKSVEFSSKKLT-DLGFTFKYSLEDMFD  313 (351)
T ss_pred             HHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccCCCCC-CCCcCcccccccCChHHHH-HhCCCCCCCHHHHHH
Confidence            9999998765 5678 56668899999999999988631 1111 1111223344556888875 699999999999999


Q ss_pred             HHHHHHHHhh
Q 019060          331 LMEDDFRLRL  340 (346)
Q Consensus       331 ~~~~~~~~~~  340 (346)
                      ++++||++..
T Consensus       314 ~~i~~~~~~~  323 (351)
T PLN02650        314 GAIETCREKG  323 (351)
T ss_pred             HHHHHHHHcC
Confidence            9999997764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=4.6e-38  Score=280.93  Aligned_cols=295  Identities=21%  Similarity=0.303  Sum_probs=217.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccC-----CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLI-----EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~-----~~d~v  101 (346)
                      .+++|||||||||||++++++|+++| ++|+++.|+..... ......    ...++.++.+|+++....     ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~v   81 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRG-YTVKATVRDLTDRK-KTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAV   81 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCCcchH-HHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEE
Confidence            36899999999999999999999999 99998888653221 111111    124688999999987543     69999


Q ss_pred             EEcccCCCccccccCh-HHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeccccc--CCC---CCCCCCCCCcCCCC-CCCC
Q 019060          102 YHLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY--GDP---LVHPQDESYWGNVN-PIGV  172 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~--~~~---~~~~~~e~~~~~~~-~~~~  172 (346)
                      ||+|+....  ...++ ...++.|+.++.+++++|++. ++ |||++||..+|  +..   .+.+++|+.+..+. +..+
T Consensus        82 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~  159 (322)
T PLN02986         82 FHTASPVFF--TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRET  159 (322)
T ss_pred             EEeCCCcCC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcc
Confidence            999986532  12233 356889999999999999985 56 89999998764  322   12346677554221 1134


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      .+.|+.+|..+|..++.+.++++++++++||+++|||...+.. .+...++..+..++.+  .+  ...++|+|++|+|+
T Consensus       160 ~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~-~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~  234 (322)
T PLN02986        160 KNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL-NFSVELIVDFINGKNL--FN--NRFYRFVDVRDVAL  234 (322)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC-CccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHH
Confidence            5779999999999999998888999999999999999765321 2223455555666543  22  45679999999999


Q ss_pred             HHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcc--cCChHHHHhhcCCcccccHHhHH
Q 019060          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQR--KPDITKATELLGWEPKIKLRDGL  329 (346)
Q Consensus       253 ~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~--~~~~~k~~~~lg~~p~~~~~e~i  329 (346)
                      +++.+++.+. .+.||+. ++.+|+.|+++.+.+.++. ..+.... ........  .+|++|++. |||+|+ +++|+|
T Consensus       235 a~~~al~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~~-~~~~~~~~~~~~d~~~~~~-lg~~~~-~l~e~~  309 (322)
T PLN02986        235 AHIKALETPSANGRYIID-GPIMSVNDIIDILRELFPD-LCIADTN-EESEMNEMICKVCVEKVKN-LGVEFT-PMKSSL  309 (322)
T ss_pred             HHHHHhcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCCC-ccccccccCCccCHHHHHH-cCCccc-CHHHHH
Confidence            9999998765 6789995 5789999999999999863 2222111 11112222  378999864 999998 999999


Q ss_pred             HHHHHHHHHh
Q 019060          330 PLMEDDFRLR  339 (346)
Q Consensus       330 ~~~~~~~~~~  339 (346)
                      +++++||.+.
T Consensus       310 ~~~~~~~~~~  319 (322)
T PLN02986        310 RDTILSLKEK  319 (322)
T ss_pred             HHHHHHHHHc
Confidence            9999999764

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3.2e-38  Score=265.58  Aligned_cols=265  Identities=26%  Similarity=0.333  Sum_probs=229.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+|||||++|++|.+|++.|. .+ ++|+.++|..                    .|+++.+.+       ++|+|||+|
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~-~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~A   58 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GE-FEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAA   58 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CC-ceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECc
Confidence            569999999999999999998 55 8999988732                    567766432       699999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      +++....++.+++..+.+|..++.+++++|++.|.++||+||.+||.+..+.++.|+     +++.|.+.||.||+.+|.
T Consensus        59 Ayt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~-----D~~~P~nvYG~sKl~GE~  133 (281)
T COG1091          59 AYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKET-----DTPNPLNVYGRSKLAGEE  133 (281)
T ss_pred             cccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCC-----CCCCChhhhhHHHHHHHH
Confidence            999888889999999999999999999999999999999999999998888899999     789999999999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CC
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~  264 (346)
                      .++.+    +.+.+|+|.+++||..    ..+|+..+++....|+.+.+..  ++..+++++.|+|++|..++.... .+
T Consensus       134 ~v~~~----~~~~~I~Rtswv~g~~----g~nFv~tml~la~~~~~l~vv~--Dq~gsPt~~~dlA~~i~~ll~~~~~~~  203 (281)
T COG1091         134 AVRAA----GPRHLILRTSWVYGEY----GNNFVKTMLRLAKEGKELKVVD--DQYGSPTYTEDLADAILELLEKEKEGG  203 (281)
T ss_pred             HHHHh----CCCEEEEEeeeeecCC----CCCHHHHHHHHhhcCCceEEEC--CeeeCCccHHHHHHHHHHHHhccccCc
Confidence            98765    4679999999999986    3678888899889999998854  688899999999999999998876 66


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceE-Ec-----cCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHH
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEIT-MV-----ENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD  335 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~-~~-----~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~  335 (346)
                      +||+++...+||.|+++.+.+.++.+..+. ..     +.....+....+++.|+++.+|+.|. +|+++++++++.
T Consensus       204 ~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~-~w~~~l~~~~~~  279 (281)
T COG1091         204 VYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP-EWREALKALLDE  279 (281)
T ss_pred             EEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-cHHHHHHHHHhh
Confidence            999999888999999999999998655333 11     22233444567899999999999998 999999999875

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=6e-38  Score=267.58  Aligned_cols=300  Identities=21%  Similarity=0.266  Sum_probs=226.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc--hhhhhcC-CCCeeEEecccCCcccC-----CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--NLRKWIG-HPRFELIRHDVTEPLLI-----EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~~~~-~~~~~~~~~d~~~~~~~-----~~d~vi  102 (346)
                      ++|+|+|||||||||++|+++||++| |.|+++.|+......  .+.++.+ .++++.+.+|+.++.+.     ++|.||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rG-Y~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVf   83 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRG-YTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVF   83 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCC-CEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEE
Confidence            57899999999999999999999999 999999997644222  2333332 34689999999998665     799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCC-----CCCCCCCCCCcCCCCCC-CCCC
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGD-----PLVHPQDESYWGNVNPI-GVRS  174 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~-----~~~~~~~e~~~~~~~~~-~~~~  174 (346)
                      |+|.+..+.... ...+.+++++.|+.+++++|++.. + |+||+||.++-..     .....++|+.|.+.+-. .-..
T Consensus        84 H~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~  162 (327)
T KOG1502|consen   84 HTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL  162 (327)
T ss_pred             EeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence            999887643333 344799999999999999999998 5 8999999875432     23456888888654421 1225


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      .|..+|..+|+..++++.+.+++.+.+.|+.|+||...+..+ .....+...++|..-..   ......|||++|||.+.
T Consensus       163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~-~s~~~~l~~i~G~~~~~---~n~~~~~VdVrDVA~AH  238 (327)
T KOG1502|consen  163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLN-SSLNALLKLIKGLAETY---PNFWLAFVDVRDVALAH  238 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccc-hhHHHHHHHHhcccccC---CCCceeeEeHHHHHHHH
Confidence            699999999999999999999999999999999998765322 22334444566643332   22344599999999999


Q ss_pred             HHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHHH
Q 019060          255 IRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL  331 (346)
Q Consensus       255 ~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~  331 (346)
                      +.+++++. .|.|.+.+ +.+++.|+++++.+.+. ...+....  ..........++++|+++++|++.+ +++|.+.+
T Consensus       239 v~a~E~~~a~GRyic~~-~~~~~~ei~~~l~~~~P-~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg~~~~~-~l~e~~~d  315 (327)
T KOG1502|consen  239 VLALEKPSAKGRYICVG-EVVSIKEIADILRELFP-DYPIPKKNAEEHEGFLTSFKVSSEKLKSLGGFKFR-PLEETLSD  315 (327)
T ss_pred             HHHHcCcccCceEEEec-CcccHHHHHHHHHHhCC-CCCCCCCCCccccccccccccccHHHHhcccceec-ChHHHHHH
Confidence            99999998 67777776 66679999999999984 33322111  1122222345799999886668876 99999999


Q ss_pred             HHHHHHHh
Q 019060          332 MEDDFRLR  339 (346)
Q Consensus       332 ~~~~~~~~  339 (346)
                      +++++++.
T Consensus       316 t~~sl~~~  323 (327)
T KOG1502|consen  316 TVESLREK  323 (327)
T ss_pred             HHHHHHHh
Confidence            99998765

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.5e-38  Score=265.08  Aligned_cols=302  Identities=26%  Similarity=0.398  Sum_probs=251.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---c-CCCCeeEEecccCCcccC-------CCCE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLLI-------EVDQ  100 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~d~~~~~~~-------~~d~  100 (346)
                      .++||||||.||||+|.+-+|+++| +.|++++.-.....+.+.+.   . ....+.++++|+.|...+       ++|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~g-y~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRG-YGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCC-CcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence            4789999999999999999999999 99999986544444444332   1 236799999999997544       6999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCC-CCCchHH
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG-VRSCYDE  178 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~-~~~~Y~~  178 (346)
                      |+|+|+.-....+-.+|.+++..|+.++.++++.+++.++ .+||.||+.|||.+...|++|+     ++.. |.++|+.
T Consensus        81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~-----~~t~~p~~pyg~  155 (343)
T KOG1371|consen   81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEE-----DPTDQPTNPYGK  155 (343)
T ss_pred             EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCc-----CCCCCCCCcchh
Confidence            9999998777777889999999999999999999999998 7999999999999999999999     5555 8889999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccC--CCCCCCC------ccHHHHHHHHHH--------cCCCeEEecCCccee
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYG--PRMNIDD------GRVVSNFIAQAI--------RGEPLTVQAPGTQTR  242 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G--~~~~~~~------~~~~~~~~~~~~--------~~~~~~~~~~~~~~~  242 (346)
                      +|.+.|+++..+.....+.++.+|.++++|  |......      ++.++....-++        -|..... .+++..+
T Consensus       156 tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t-~dgt~vr  234 (343)
T KOG1371|consen  156 TKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTT-IDGTIVR  234 (343)
T ss_pred             hhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccc-cCCCeee
Confidence            999999999999988889999999999999  4322211      233332222111        1222222 2457789


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLG  318 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg  318 (346)
                      +++|+-|+|+..+.++.+..    .++||+..+...++.++..++++..|.+.++..++....+......+.++++++||
T Consensus       235 dyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~a~~elg  314 (343)
T KOG1371|consen  235 DYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSKAQRELG  314 (343)
T ss_pred             cceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHHHHHHhC
Confidence            99999999999999998754    46999999999999999999999999999999999888888889999999999999


Q ss_pred             CcccccHHhHHHHHHHHHHHhh
Q 019060          319 WEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       319 ~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      |+|.+.++++++++.+|..++-
T Consensus       315 wk~~~~iee~c~dlw~W~~~np  336 (343)
T KOG1371|consen  315 WKAKYGLQEMLKDLWRWQKQNP  336 (343)
T ss_pred             CccccCHHHHHHHHHHHHhcCC
Confidence            9999999999999999987653

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=2.8e-37  Score=271.57  Aligned_cols=266  Identities=24%  Similarity=0.296  Sum_probs=212.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a~  106 (346)
                      ||||||||||||++++++|+++| ++|++++|.                    .+|+.+.+.       .++|+|||+|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g-~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~   59 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEG-RVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAA   59 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcC-CEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCc
Confidence            58999999999999999999999 999999874                    234433321       25799999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ..........+...++.|+.++.+++++|++.+.+||++||..+|+.....+++|+     ++..|.+.|+.+|..+|+.
T Consensus        60 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~vy~~~~~~~~~E~-----~~~~~~~~Y~~~K~~~E~~  134 (287)
T TIGR01214        60 YTDVDGAESDPEKAFAVNALAPQNLARAAARHGARLVHISTDYVFDGEGKRPYRED-----DATNPLNVYGQSKLAGEQA  134 (287)
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeeeecCCCCCCCCCC-----CCCCCcchhhHHHHHHHHH
Confidence            76543344567778899999999999999988889999999999987666778887     4566778899999999999


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC--CCC
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE--NTG  264 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~--~~~  264 (346)
                      ++.+    +.+++++||+.+||++..   ..++..++..+..++.+.+.+  +..++++|++|+|++++.++..+  .++
T Consensus       135 ~~~~----~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~~~~  205 (287)
T TIGR01214       135 IRAA----GPNALIVRTSWLYGGGGG---RNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLARARG  205 (287)
T ss_pred             HHHh----CCCeEEEEeeecccCCCC---CCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccCCCC
Confidence            8764    678999999999999732   356666777777777776654  36689999999999999999875  378


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcce------EEcc-----CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHH
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEI------TMVE-----NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME  333 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~------~~~~-----~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~  333 (346)
                      +||+++++.+|+.|+++.+.+.+|.+...      ....     .....+....+|++|++++|||.+ .+++++|++++
T Consensus       206 ~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~~~-~~~~~~l~~~~  284 (287)
T TIGR01214       206 VYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGTPL-PHWREALRAYL  284 (287)
T ss_pred             eEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCCCC-ccHHHHHHHHH
Confidence            99999999999999999999999976431      1111     111222446789999999999955 59999999887


Q ss_pred             HH
Q 019060          334 DD  335 (346)
Q Consensus       334 ~~  335 (346)
                      +.
T Consensus       285 ~~  286 (287)
T TIGR01214       285 QE  286 (287)
T ss_pred             hh
Confidence            63

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN00016 RNA-binding protein; Provisional

Probab=100.00  E-value=4.8e-37  Score=279.58  Aligned_cols=277  Identities=21%  Similarity=0.263  Sum_probs=215.9

Q ss_pred             CCCCEEEEE----cCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhh-------hhcCCCCeeEEecccCCcc----
Q 019060           30 QSNMRILVT----GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR-------KWIGHPRFELIRHDVTEPL----   94 (346)
Q Consensus        30 ~~~~~ilIt----G~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~~~d~~~~~----   94 (346)
                      .++|+||||    |||||||++|+++|++.| |+|++++|...... .+.       ..+...+++++.+|+.+..    
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-~~V~~l~R~~~~~~-~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~~  127 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAG-HEVTLFTRGKEPSQ-KMKKEPFSRFSELSSAGVKTVWGDPADVKSKVA  127 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCC-CEEEEEecCCcchh-hhccCchhhhhHhhhcCceEEEecHHHHHhhhc
Confidence            456899999    999999999999999999 99999999753211 110       0111235889999988732    


Q ss_pred             cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           95 LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      ..++|+|||+++.                +..++.+++++|++.++ ||||+||..+|+.....+..|+     ++..|.
T Consensus       128 ~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~-----~~~~p~  186 (378)
T PLN00016        128 GAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG-----DAVKPK  186 (378)
T ss_pred             cCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC-----CcCCCc
Confidence            1369999998742                13467889999999998 8999999999987655566665     333332


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      .    +|..+|.+++    ..+++++++||+++|||+..   ..+...++..+..++++.+++++...++++|++|+|++
T Consensus       187 ~----sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~---~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~a  255 (378)
T PLN00016        187 A----GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNN---KDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASM  255 (378)
T ss_pred             c----hHHHHHHHHH----HcCCCeEEEeceeEECCCCC---CchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHH
Confidence            2    7999998774    35899999999999999743   23455667777788888887888888999999999999


Q ss_pred             HHHHHhCCC--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC----------CCCCCcccCChHHHHhhcCCcc
Q 019060          254 LIRLMEGEN--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENT----------PDDPRQRKPDITKATELLGWEP  321 (346)
Q Consensus       254 i~~~~~~~~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~~~~k~~~~lg~~p  321 (346)
                      ++.++.++.  +++||+++++.+|+.|+++.+.+.+|.+.++...+..          +........|++|++++|||+|
T Consensus       256 i~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p  335 (378)
T PLN00016        256 FALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTP  335 (378)
T ss_pred             HHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCC
Confidence            999998754  6789999999999999999999999987655432211          1112234569999999999999


Q ss_pred             cccHHhHHHHHHHHHHHhh
Q 019060          322 KIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       322 ~~~~~e~i~~~~~~~~~~~  340 (346)
                      +++++|+|+++++||+.+.
T Consensus       336 ~~~l~egl~~~~~~~~~~~  354 (378)
T PLN00016        336 KFDLVEDLKDRYELYFGRG  354 (378)
T ss_pred             CCCHHHHHHHHHHHHHhcC
Confidence            9999999999999997654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=6.1e-36  Score=268.14  Aligned_cols=290  Identities=22%  Similarity=0.324  Sum_probs=218.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~a~~  107 (346)
                      |+||||||+||||+++++.|+++| ++|++++|+..... .    ....+++++.+|+.+....     ++|+|||+|+.
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~----~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~   74 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQG-EEVRVLVRPTSDRR-N----LEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAAD   74 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCC-CEEEEEEecCcccc-c----cccCCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence            689999999999999999999999 99999998643211 1    1123688899999986433     68999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCC-CCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      ..  ....++...++.|+.++.++++++++.++ ++|++||..+|+. ..+.+.+|+...  .+..+...|+.+|.++|+
T Consensus        75 ~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~--~~~~~~~~Y~~sK~~~e~  150 (328)
T TIGR03466        75 YR--LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPS--SLDDMIGHYKRSKFLAEQ  150 (328)
T ss_pred             cc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCC--CcccccChHHHHHHHHHH
Confidence            42  23456778899999999999999999887 8999999999985 344566776321  112224579999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCC-
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG-  264 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~-  264 (346)
                      +++.+....+++++++||+.+||++....  .....++.....++.....   +...+++|++|+|++++.+++++..+ 
T Consensus       151 ~~~~~~~~~~~~~~ilR~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~~~~~  225 (328)
T TIGR03466       151 AALEMAAEKGLPVVIVNPSTPIGPRDIKP--TPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERGRIGE  225 (328)
T ss_pred             HHHHHHHhcCCCEEEEeCCccCCCCCCCC--CcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCCCCCc
Confidence            99999887899999999999999975321  1223334444444333222   23368999999999999999876644 


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC----------------CCCC-----------CcccCChHHHHhhc
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEITMVENT----------------PDDP-----------RQRKPDITKATELL  317 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~----------------~~~~-----------~~~~~~~~k~~~~l  317 (346)
                      .|++ +++.+|+.|+++.+.+.+|.+......+..                ...+           ....+|++|+++.|
T Consensus       226 ~~~~-~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  304 (328)
T TIGR03466       226 RYIL-GGENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVREL  304 (328)
T ss_pred             eEEe-cCCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHc
Confidence            5666 568999999999999999976544332210                0011           24567999999999


Q ss_pred             CCcccccHHhHHHHHHHHHHHh
Q 019060          318 GWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       318 g~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      ||+|. +++++++++++||+++
T Consensus       305 g~~p~-~~~~~i~~~~~~~~~~  325 (328)
T TIGR03466       305 GYRQR-PAREALRDAVEWFRAN  325 (328)
T ss_pred             CCCCc-CHHHHHHHHHHHHHHh
Confidence            99996 9999999999999764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.3e-35  Score=266.87  Aligned_cols=289  Identities=17%  Similarity=0.181  Sum_probs=212.3

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-------CCCeeEEecccCCcccC-----
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-------HPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~d~~~~~~~-----   96 (346)
                      ..++|+||||||+||||++|+++|+++| ++|+++.|+... ...+.....       ..++.++.+|+++....     
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G-~~V~~~~r~~~~-~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHG-YSVRIAVDTQED-KEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEeCCHHH-HHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            3457899999999999999999999999 999988875321 111111110       12578899999987533     


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecc--cccCCC--CC--CCCCCCCcCCC-
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTS--EVYGDP--LV--HPQDESYWGNV-  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~--~v~~~~--~~--~~~~e~~~~~~-  167 (346)
                      ++|.|||+|+..++...........+.|+.++.+++++|++. ++ ||||+||.  .+|+..  ..  ..++|+.+... 
T Consensus       128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            699999999876433222222345678999999999999986 56 89999996  467642  12  23566544321 


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .+..|.+.|+.+|.++|.+++.+++..+++++++||+++|||+.......   .++ ..+.+. +.++++  ..++|+||
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~---~~~-~~~~g~-~~~~g~--g~~~~v~V  280 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNST---ATI-AYLKGA-QEMLAD--GLLATADV  280 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCCh---hHH-HHhcCC-CccCCC--CCcCeEEH
Confidence            23446678999999999999998888899999999999999975322111   122 334443 444444  34579999


Q ss_pred             HHHHHHHHHHHhCC---C-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC-CCCCCcccCChHHHHhhcCCccc
Q 019060          248 SDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENT-PDDPRQRKPDITKATELLGWEPK  322 (346)
Q Consensus       248 ~Dva~~i~~~~~~~---~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~k~~~~lg~~p~  322 (346)
                      +|+|++++.+++..   . ++.| +++++.+++.|+++.+.+.+|.+......+.. +.++.....|++|++++|||.|+
T Consensus       281 ~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l~~~~~  359 (367)
T PLN02686        281 ERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLMSRTRR  359 (367)
T ss_pred             HHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHHHHhhh
Confidence            99999999999852   2 4577 88889999999999999999987666655544 56777888999999999999987


Q ss_pred             ccHHh
Q 019060          323 IKLRD  327 (346)
Q Consensus       323 ~~~~e  327 (346)
                      -.+++
T Consensus       360 ~~~~~  364 (367)
T PLN02686        360 CCYDE  364 (367)
T ss_pred             ccccc
Confidence            54443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=6.2e-35  Score=260.11  Aligned_cols=271  Identities=21%  Similarity=0.273  Sum_probs=209.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcC-CCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~  104 (346)
                      ++|+||||||+||||++|+++|+++| .++|++++|.... ...+.......++.++.+|+.|...+     ++|+|||+
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~-~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK-QWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH-HHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            36899999999999999999999986 2689988875422 11122222234688999999997543     69999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ||.........++...+++|+.++.+++++|++.++ +||++||...                   ..|.++|+.+|..+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~-------------------~~p~~~Y~~sK~~~  142 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA-------------------ANPINLYGATKLAS  142 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC-------------------CCCCCHHHHHHHHH
Confidence            997654344567788999999999999999999887 8999999632                   23346799999999


Q ss_pred             HHHHHHHH---HHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCC-CeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          184 ETLMFDYH---RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       184 E~~~~~~~---~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      |.+++.++   ...+++++++||+++|||+     ..+++.+......+. .+.+ .++...++|+|++|++++++.+++
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~-----~~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSR-----GSVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCC-----CCcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHh
Confidence            99987754   3468999999999999986     346677776666665 4555 466778899999999999999998


Q ss_pred             CCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCC-CcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          260 GEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDP-RQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       260 ~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~-~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      +.. +++| +.++..+++.|+++.+.+..    .+.+.+..+... ....+|.+++++.|||.|+++++++++..
T Consensus       217 ~~~~~~~~-~~~~~~~sv~el~~~i~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~l~~~~~~~  286 (324)
T TIGR03589       217 RMLGGEIF-VPKIPSMKITDLAEAMAPEC----PHKIVGIRPGEKLHEVMITEDDARHTYELGDYYAILPSISFW  286 (324)
T ss_pred             hCCCCCEE-ccCCCcEEHHHHHHHHHhhC----CeeEeCCCCCchhHhhhcChhhhhhhcCCCCeEEEccccccc
Confidence            754 3456 56667799999999999864    344444444432 33567999999999999999999998644

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=6.9e-35  Score=249.03  Aligned_cols=225  Identities=36%  Similarity=0.573  Sum_probs=193.2

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcccC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLACP  107 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a~~  107 (346)
                      |||||||||||++|+++|+++| +.|+.+.|..........+    .++.++.+|+.+....       ++|+|||+|+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKG-HEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-TEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcC-Ccccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            7999999999999999999999 9999888865332211111    1789999999986443       58999999987


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ........++...++.|+.++.+++++|++.++ +||++||..+|+.....+++|+     .+..|.++|+.+|..+|++
T Consensus        76 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~-----~~~~~~~~Y~~~K~~~e~~  150 (236)
T PF01370_consen   76 SSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDED-----SPINPLSPYGASKRAAEEL  150 (236)
T ss_dssp             SSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETT-----SGCCHSSHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccc
Confidence            643233467888999999999999999999998 9999999999998877777888     5667888899999999999


Q ss_pred             HHHHHHHhCCceEEEEeccccCCC-CCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      ++.+.+.++++++++||+.+|||. .......+++.++..+..++++.++++++..++++|++|+|++++.+++++.  +
T Consensus       151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~  230 (236)
T PF01370_consen  151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAG  230 (236)
T ss_dssp             HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCC
Confidence            999999889999999999999998 2233477899999999999999999999999999999999999999999887  7


Q ss_pred             CcEEec
Q 019060          264 GPINIG  269 (346)
Q Consensus       264 ~~~~~~  269 (346)
                      ++||++
T Consensus       231 ~~yNig  236 (236)
T PF01370_consen  231 GIYNIG  236 (236)
T ss_dssp             EEEEES
T ss_pred             CEEEeC
Confidence            899985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=5.6e-35  Score=253.49  Aligned_cols=248  Identities=27%  Similarity=0.336  Sum_probs=191.7

Q ss_pred             EEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccCCC
Q 019060           36 LVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACPAS  109 (346)
Q Consensus        36 lItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~~~  109 (346)
                      |||||+||||++|+++|+++|. ++|+++++.......  .........+++.+|+++.+.     .++|+|||+|++..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~   78 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP   78 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence            6999999999999999999995 689998886533221  111122234499999999754     37999999998765


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCC---CCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHP---QDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~-~~~---~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      ... ....+..+++|+.|+++++++|++.++ ||||+||..+++... +.+   .+|+.+   .+..+.+.|+.||.++|
T Consensus        79 ~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~---~~~~~~~~Y~~SK~~AE  154 (280)
T PF01073_consen   79 PWG-DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTP---YPSSPLDPYAESKALAE  154 (280)
T ss_pred             ccC-cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCc---ccccccCchHHHHHHHH
Confidence            322 456778999999999999999999998 899999999887522 222   244422   23346678999999999


Q ss_pred             HHHHHHHH---H--hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          185 TLMFDYHR---Q--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       185 ~~~~~~~~---~--~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      +++.+...   +  ..+.++++||+.||||+.    ..+.+.+......+......+++....+++|++|+|.+++.+++
T Consensus       155 ~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d----~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~  230 (280)
T PF01073_consen  155 KAVLEANGSELKNGGRLRTCALRPAGIYGPGD----QRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQ  230 (280)
T ss_pred             HHHHhhcccccccccceeEEEEeccEEeCccc----ccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHH
Confidence            99988765   1  248899999999999974    33455566666667666667888888999999999999987654


Q ss_pred             ---CC------CCCcEEecCCCCCC-HHHHHHHHHHHcCCCcce
Q 019060          260 ---GE------NTGPINIGNPGEFT-MLELAENVKELINPNVEI  293 (346)
Q Consensus       260 ---~~------~~~~~~~~~~~~~s-~~ei~~~i~~~~g~~~~~  293 (346)
                         ++      .++.|++.+++++. +.||...+.+.+|.+.+.
T Consensus       231 ~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~  274 (280)
T PF01073_consen  231 ALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK  274 (280)
T ss_pred             HhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence               22      16689999999999 999999999999987554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=4.6e-34  Score=233.99  Aligned_cols=304  Identities=25%  Similarity=0.284  Sum_probs=248.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh-----hhhcCCCCeeEEecccCCcccC-------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-----RKWIGHPRFELIRHDVTEPLLI-------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~d~~~~~~~-------~~   98 (346)
                      |+++.||||-||+-|++|++.|++.| |+|.++.|.........     ......+++.++.+|++|...+       ++
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekG-Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P   79 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKG-YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP   79 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcC-cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence            46789999999999999999999999 99999988643322221     1122345688999999997543       79


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      |-|+|+|+..+...+.+.|....+++..|+.+++++.+..+   +||.+.||...||.-...|..|+     +|+.|.++
T Consensus        80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~-----TPFyPrSP  154 (345)
T COG1089          80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  154 (345)
T ss_pred             hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccC-----CCCCCCCH
Confidence            99999999888888889999999999999999999999875   38999999999999999999999     89999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      |+.+|..+-.+...|.+.+++-.+.-.+.+--+|.++... ++-+...+.++..|.. -...|+-+..+||-|..|-+++
T Consensus       155 YAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~  234 (345)
T COG1089         155 YAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEA  234 (345)
T ss_pred             HHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHH
Confidence            9999999999999999999987777777776677543221 3445555556666633 3344778899999999999999


Q ss_pred             HHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceE----------------Ecc--C---CCCCCCcccCChHH
Q 019060          254 LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT----------------MVE--N---TPDDPRQRKPDITK  312 (346)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~----------------~~~--~---~~~~~~~~~~~~~k  312 (346)
                      ...+++++....|.++.++..|++|++++..+.+|.+.+++                +++  +   .|....-...|.+|
T Consensus       235 mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~K  314 (345)
T COG1089         235 MWLMLQQEEPDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTK  314 (345)
T ss_pred             HHHHHccCCCCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHH
Confidence            99999999999999999999999999999999999877653                111  1   12222335569999


Q ss_pred             HHhhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          313 ATELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       313 ~~~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +++.|||+|+++++|.++.|+++..+..
T Consensus       315 A~~~LGW~~~~~~~elv~~Mv~~dl~~~  342 (345)
T COG1089         315 AKEKLGWRPEVSLEELVREMVEADLEAA  342 (345)
T ss_pred             HHHHcCCccccCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999876654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.7e-34  Score=225.17  Aligned_cols=294  Identities=24%  Similarity=0.295  Sum_probs=244.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-------ccCCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~d~vi~  103 (346)
                      +|+|||||++|.+|++|.+.+.+.+. .+-.++..+                   -.+|+++.       +..++..|||
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-------------------kd~DLt~~a~t~~lF~~ekPthVIh   61 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-------------------KDADLTNLADTRALFESEKPTHVIH   61 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-------------------ccccccchHHHHHHHhccCCceeee
Confidence            47999999999999999999999882 122222111                   13455553       2347999999


Q ss_pred             cccCCCccc-cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          104 LACPASPIF-YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      +|+..+... ....+..++..|+.-..|++..|.+.|+ +++++.|..+|.+-..-|++|+-.....|......|+.+|+
T Consensus        62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr  141 (315)
T KOG1431|consen   62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKR  141 (315)
T ss_pred             hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHH
Confidence            999765433 3345678889999999999999999998 89999999999988888889886655555556678999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHH----cC-CCeEEecCCcceeecccHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAI----RG-EPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      ++.-.-+.|+.+++..++.+-|.++|||..+.+.  +..++.+++++.    .| ..+.++|++...+.|+|++|+|+++
T Consensus       142 ~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~  221 (315)
T KOG1431|consen  142 MIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLF  221 (315)
T ss_pred             HHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHH
Confidence            9998889999999999999999999999876553  567788877664    23 3789999999999999999999999


Q ss_pred             HHHHhCCC-CCcEEecCCC--CCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCccccc-HHhHHH
Q 019060          255 IRLMEGEN-TGPINIGNPG--EFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIK-LRDGLP  330 (346)
Q Consensus       255 ~~~~~~~~-~~~~~~~~~~--~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~~e~i~  330 (346)
                      ++++.+-+ -+..+++.++  .+|++|+++++.++++...++.+.-.++.......+|++|++. |+|.|+++ ++++|.
T Consensus       222 i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKtasnsKL~s-l~pd~~ft~l~~ai~  300 (315)
T KOG1431|consen  222 IWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTASNSKLRS-LLPDFKFTPLEQAIS  300 (315)
T ss_pred             HHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCcccccchHHHHH-hCCCcccChHHHHHH
Confidence            99998755 5678888777  8999999999999999999999888888888889999999986 88899885 999999


Q ss_pred             HHHHHHHHhhcCCCC
Q 019060          331 LMEDDFRLRLAVPRK  345 (346)
Q Consensus       331 ~~~~~~~~~~~~~~~  345 (346)
                      ++++||.++-.++||
T Consensus       301 ~t~~Wy~~Ny~qark  315 (315)
T KOG1431|consen  301 ETVQWYLDNYEQARK  315 (315)
T ss_pred             HHHHHHHHhHHhhcC
Confidence            999999999888775

>PLN02778 3,5-epimerase/4-reductase

Probab=100.00  E-value=9.7e-34  Score=249.05  Aligned_cols=272  Identities=18%  Similarity=0.229  Sum_probs=198.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      +.|+||||||+||||++|+++|+++| ++|++..+...             +...+..|+.+   .++|+|||+||..+.
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g-~~V~~~~~~~~-------------~~~~v~~~l~~---~~~D~ViH~Aa~~~~   70 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQG-IDFHYGSGRLE-------------NRASLEADIDA---VKPTHVFNAAGVTGR   70 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCC-CEEEEecCccC-------------CHHHHHHHHHh---cCCCEEEECCcccCC
Confidence            46899999999999999999999999 89875432110             01112223322   368999999997653


Q ss_pred             c---ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCC------CCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          111 I---FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL------VHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       111 ~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~------~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      .   .+..++...++.|+.++.+++++|++.+++++++||..+|+...      +.+++|++    .+..+.+.|+.+|.
T Consensus        71 ~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK~  146 (298)
T PLN02778         71 PNVDWCESHKVETIRANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTKA  146 (298)
T ss_pred             CCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHHH
Confidence            2   24568889999999999999999999998888889888887533      22355553    23334578999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ++|.++..+.     +..++|+..++|+...     ...+++..++.+..+...+     .+++|++|++++++.++++.
T Consensus       147 ~~E~~~~~y~-----~~~~lr~~~~~~~~~~-----~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~  211 (298)
T PLN02778        147 MVEELLKNYE-----NVCTLRVRMPISSDLS-----NPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRN  211 (298)
T ss_pred             HHHHHHHHhh-----ccEEeeecccCCcccc-----cHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCC
Confidence            9999998764     3568898887876421     1234667777777655432     37999999999999999766


Q ss_pred             CCCcEEecCCCCCCHHHHHHHHHHHcCCCcce---EEccCCC---CCCCcccCChHHHHhhcCCcccccHHhHHHHHHHH
Q 019060          262 NTGPINIGNPGEFTMLELAENVKELINPNVEI---TMVENTP---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD  335 (346)
Q Consensus       262 ~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~---~~~~~~~---~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~  335 (346)
                      ..|+||+++++.+|+.|+++.+.+.+|.+..+   .+.+...   .......+|++|+++.++-.+. ..+++++..++.
T Consensus       212 ~~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k~~~~~~~~~~-~~~~~~~~~~~~  290 (298)
T PLN02778        212 LTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTKLKREFPELLP-IKESLIKYVFEP  290 (298)
T ss_pred             CCCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHHHHHhcccccc-hHHHHHHHHHHH
Confidence            57899999999999999999999999976432   1111100   0111236899999998876555 678888888887


Q ss_pred             HHHh
Q 019060          336 FRLR  339 (346)
Q Consensus       336 ~~~~  339 (346)
                      ++..
T Consensus       291 ~~~~  294 (298)
T PLN02778        291 NKKT  294 (298)
T ss_pred             HHhh
Confidence            6443

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=4.3e-34  Score=248.94  Aligned_cols=302  Identities=24%  Similarity=0.279  Sum_probs=235.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC-CCeEEEEeCCCCCCcchhhhh-cCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      +.++|||||+||+|++|+++|++++ ..+|++++............. .....+.++.+|+.+...     .++ .|+|+
T Consensus         4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~   82 (361)
T KOG1430|consen    4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC   82 (361)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence            5689999999999999999999998 478999988653221111111 124678999999998743     367 78888


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-CCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |+...+.....+++...++|+.++.+++++|.+.++ ++||+||..|...... ...+|+..   .|....+.|+.||..
T Consensus        83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p---~p~~~~d~Y~~sKa~  159 (361)
T KOG1430|consen   83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLP---YPLKHIDPYGESKAL  159 (361)
T ss_pred             ccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCC---CccccccccchHHHH
Confidence            876665666667999999999999999999999999 8999999998654444 33445422   233444689999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh---
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME---  259 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~---  259 (346)
                      +|+++++.+...++..+++||+.||||+    ...+++.++..+..|+.+...+++....+++++..|+.+.+.+..   
T Consensus       160 aE~~Vl~an~~~~l~T~aLR~~~IYGpg----d~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~  235 (361)
T KOG1430|consen  160 AEKLVLEANGSDDLYTCALRPPGIYGPG----DKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALL  235 (361)
T ss_pred             HHHHHHHhcCCCCeeEEEEccccccCCC----CccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHH
Confidence            9999998775556899999999999998    356788888888999999888988888899999999888775432   


Q ss_pred             -CCC---CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccC--------------------CCC--------CCCcc
Q 019060          260 -GEN---TGPINIGNPGEFTMLELAENVKELINPNVE-ITMVEN--------------------TPD--------DPRQR  306 (346)
Q Consensus       260 -~~~---~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~--------------------~~~--------~~~~~  306 (346)
                       +..   ++.|++.++.++...++...+.+.+|...+ ....+.                    .+.        .....
T Consensus       236 ~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~  315 (361)
T KOG1430|consen  236 DKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTR  315 (361)
T ss_pred             hcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeecccc
Confidence             222   668999999999888888899999998766 222111                    010        00134


Q ss_pred             cCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          307 KPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       307 ~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      .++.+|+++.|||.|.++++|++++++.|+.....
T Consensus       316 ~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~  350 (361)
T KOG1430|consen  316 TFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESD  350 (361)
T ss_pred             ccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhh
Confidence            56999999999999999999999999998866554

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=5.2e-33  Score=247.38  Aligned_cols=268  Identities=15%  Similarity=0.173  Sum_probs=201.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~  107 (346)
                      |+|||||||||||++|+++|+++| |+|++++|+....     ..+...+++++.+|+.++..     .++|+|||+++.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g-~~V~~l~R~~~~~-----~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~   74 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEG-YQVRCLVRNLRKA-----SFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTS   74 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcChHHh-----hhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence            699999999999999999999999 9999999964211     11122478999999998743     379999998753


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      .     ..++....+.|+.++.+++++|++.++ |||++||..+..                  .+..+|..+|..+|++
T Consensus        75 ~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~------------------~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         75 R-----PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ------------------YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             C-----CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc------------------cCCChHHHHHHHHHHH
Confidence            2     123445668899999999999999998 899999864321                  1123588999999998


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--CC
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~  264 (346)
                      ++    .++++++++||+.+|+..        +..+....+.++++.+ ..+...++++|++|+|++++.+++.+.  ++
T Consensus       132 l~----~~~l~~tilRp~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~  198 (317)
T CHL00194        132 LK----KSGIPYTIFRLAGFFQGL--------ISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPETKNK  198 (317)
T ss_pred             HH----HcCCCeEEEeecHHhhhh--------hhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccccCc
Confidence            74    458999999999888632        1122222334455554 345667899999999999999998654  67


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC---------------CCCC------------CcccCChHHHHhhc
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEITMVENT---------------PDDP------------RQRKPDITKATELL  317 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~---------------~~~~------------~~~~~~~~k~~~~l  317 (346)
                      +||+++++.+|+.|+++.+.+.+|.+..+..++..               +...            .....+.+++.+.|
T Consensus       199 ~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  278 (317)
T CHL00194        199 TFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIF  278 (317)
T ss_pred             EEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHh
Confidence            99999999999999999999999987766654421               0000            01223567888899


Q ss_pred             CCccc--ccHHhHHHHHHHHHHHhhcC
Q 019060          318 GWEPK--IKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       318 g~~p~--~~~~e~i~~~~~~~~~~~~~  342 (346)
                      |+.|.  .++++++++.++...++++.
T Consensus       279 g~~p~~~~~~~~~~~~~~~~~~~~~~~  305 (317)
T CHL00194        279 KIDPNELISLEDYFQEYFERILKRLKD  305 (317)
T ss_pred             CCChhhhhhHHHHHHHHHHHHHHHHHh
Confidence            99984  58999999999988877653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=100.00  E-value=4.9e-32  Score=238.91  Aligned_cols=275  Identities=18%  Similarity=0.191  Sum_probs=191.8

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc--c
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI--F  112 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~--~  112 (346)
                      |||||||||||+++++.|++.| ++|++++|+........     ...+.....+.......++|+|||+|+.....  .
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~   74 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDG-HEVTILTRSPPAGANTK-----WEGYKPWAPLAESEALEGADAVINLAGEPIADKRW   74 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcC-CEEEEEeCCCCCCCccc-----ceeeecccccchhhhcCCCCEEEECCCCCcccccC
Confidence            6999999999999999999999 99999999754322111     01111111111222344799999999864321  1


Q ss_pred             cccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHH
Q 019060          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (346)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (346)
                      ....+...++.|+.++.+++++|++.++   +||+.||..+|+.....+++|+     .+..+.+.|+..+...|..+..
T Consensus        75 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~-----~~~~~~~~~~~~~~~~e~~~~~  149 (292)
T TIGR01777        75 TEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEE-----DSPAGDDFLAELCRDWEEAAQA  149 (292)
T ss_pred             CHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcc-----cCCCCCChHHHHHHHHHHHhhh
Confidence            2234566778999999999999999875   3666677778987666677777     3344445577777777777664


Q ss_pred             HHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CCcEEe
Q 019060          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINI  268 (346)
Q Consensus       190 ~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~~~~~  268 (346)
                      . ++.+++++++||+.+|||..     .....++.......... .++++..++++|++|+|+++..+++++. .+.||+
T Consensus       150 ~-~~~~~~~~ilR~~~v~G~~~-----~~~~~~~~~~~~~~~~~-~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~  222 (292)
T TIGR01777       150 A-EDLGTRVVLLRTGIVLGPKG-----GALAKMLPPFRLGLGGP-LGSGRQWFSWIHIEDLVQLILFALENASISGPVNA  222 (292)
T ss_pred             c-hhcCCceEEEeeeeEECCCc-----chhHHHHHHHhcCcccc-cCCCCcccccEeHHHHHHHHHHHhcCcccCCceEe
Confidence            4 34579999999999999963     22333332222111111 3667888999999999999999998754 789999


Q ss_pred             cCCCCCCHHHHHHHHHHHcCCCcceEEccCCC---------C-CCCcccCChHHHHhhcCCcccc-cHHhHH
Q 019060          269 GNPGEFTMLELAENVKELINPNVEITMVENTP---------D-DPRQRKPDITKATELLGWEPKI-KLRDGL  329 (346)
Q Consensus       269 ~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~---------~-~~~~~~~~~~k~~~~lg~~p~~-~~~e~i  329 (346)
                      ++++++|+.|+++.+.+.+|.+..+. .+.+.         . .......+++|+++ +||+|++ +++|++
T Consensus       223 ~~~~~~s~~di~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~  292 (292)
T TIGR01777       223 TAPEPVRNKEFAKALARALHRPAFFP-VPAFVLRALLGEMADLLLKGQRVLPEKLLE-AGFQFQYPDLDEAL  292 (292)
T ss_pred             cCCCccCHHHHHHHHHHHhCCCCcCc-CCHHHHHHHhchhhHHHhCCcccccHHHHh-cCCeeeCcChhhcC
Confidence            99999999999999999999764332 22110         0 01234457788875 9999998 588763

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05865 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-31  Score=257.11  Aligned_cols=250  Identities=22%  Similarity=0.299  Sum_probs=188.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~  107 (346)
                      |+|+||||+||||++++++|+++| ++|++++|.....   .     ..++.++.+|+.+...     .++|+|||+|+.
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G-~~Vv~l~R~~~~~---~-----~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~   71 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQG-HEVVGIARHRPDS---W-----PSSADFIAADIRDATAVESAMTGADVVAHCAWV   71 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCchhh---c-----ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCc
Confidence            689999999999999999999999 9999999853211   0     1257889999998643     369999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ..+         ..++|+.++.+++++|++.++ +||++||..                              |.++|++
T Consensus        72 ~~~---------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~l  112 (854)
T PRK05865         72 RGR---------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQM  112 (854)
T ss_pred             ccc---------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHH
Confidence            431         458899999999999999987 899999852                              7888887


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--CC
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~  264 (346)
                      +.    .++++++++||+++|||+.        ..++..... ..+...+.+...++|+|++|+|++++.+++.+.  ++
T Consensus       113 l~----~~gl~~vILRp~~VYGP~~--------~~~i~~ll~-~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~gg  179 (854)
T PRK05865        113 LA----DCGLEWVAVRCALIFGRNV--------DNWVQRLFA-LPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSG  179 (854)
T ss_pred             HH----HcCCCEEEEEeceEeCCCh--------HHHHHHHhc-CceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCC
Confidence            74    3589999999999999962        223333222 223323444566799999999999999986543  67


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcC---CCcceEEccCC--CCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHh
Q 019060          265 PINIGNPGEFTMLELAENVKELIN---PNVEITMVENT--PDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g---~~~~~~~~~~~--~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      +||+++++.+|+.|+++.+.+...   ........+..  ........+|++|+++.|||+|+++++++++++++||+.+
T Consensus       180 vyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~sLeeGL~dti~~~r~r  259 (854)
T PRK05865        180 PVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWNAEECLEDFTLAVRGR  259 (854)
T ss_pred             eEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence            999999999999999999987542   11111111000  0111234679999999999999999999999999999876


Q ss_pred             hcCC
Q 019060          340 LAVP  343 (346)
Q Consensus       340 ~~~~  343 (346)
                      ....
T Consensus       260 i~~~  263 (854)
T PRK05865        260 IGLG  263 (854)
T ss_pred             cccc
Confidence            5544

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-31  Score=258.18  Aligned_cols=295  Identities=23%  Similarity=0.252  Sum_probs=213.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHH--hcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCccc----------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLM--ENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL----------IE   97 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~--~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~----------~~   97 (346)
                      |+|||||||||||++|+++|+  ..| ++|++++|...  .......   ....+++++.+|+.++..          .+
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g-~~V~~l~R~~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRRE-ATVHVLVRRQS--LSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCC-CEEEEEECcch--HHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcC
Confidence            689999999999999999999  477 99999999532  1222221   122468999999988531          47


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      +|+|||+|+....   ........+.|+.++.+++++|++.++ +|||+||..+||... ...+|+.+.  .+..+.+.|
T Consensus        78 ~D~Vih~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~--~~~~~~~~Y  151 (657)
T PRK07201         78 IDHVVHLAAIYDL---TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFD--EGQGLPTPY  151 (657)
T ss_pred             CCEEEECceeecC---CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-Cccccccch--hhcCCCCch
Confidence            9999999986542   234566778999999999999999877 899999999998543 334454322  123344679


Q ss_pred             HHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCc-----cHHHHHHHHHHc-CCCeEEecCCcceeecccHHHH
Q 019060          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-----RVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      +.+|.++|.+++.   ..+++++++||+.+||+.......     .++..++..... .......+.+....+++|++|+
T Consensus       152 ~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddv  228 (657)
T PRK07201        152 HRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYV  228 (657)
T ss_pred             HHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHH
Confidence            9999999999864   347999999999999986432211     122233333211 1223333455567899999999


Q ss_pred             HHHHHHHHhCCC--CCcEEecCCCCCCHHHHHHHHHHHcCCCc---ceEEccCCC----------------------C--
Q 019060          251 VDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKELINPNV---EITMVENTP----------------------D--  301 (346)
Q Consensus       251 a~~i~~~~~~~~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~---~~~~~~~~~----------------------~--  301 (346)
                      +++++.+++.+.  +++||+++++++++.|+++.+.+.+|.+.   ....++...                      .  
T Consensus       229 a~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (657)
T PRK07201        229 ADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIP  308 (657)
T ss_pred             HHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCC
Confidence            999999887654  56999999999999999999999999766   332222110                      0  


Q ss_pred             ------CCCcccCChHHHHhhc---CCcccccHHhHHHHHHHHHHHhh
Q 019060          302 ------DPRQRKPDITKATELL---GWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       302 ------~~~~~~~~~~k~~~~l---g~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                            ......+|.+++++.|   |+.+. .+++++.+++++|.+++
T Consensus       309 ~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~  355 (657)
T PRK07201        309 PEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHL  355 (657)
T ss_pred             HHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcC
Confidence                  0112356889998888   55554 78999999999998875

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=8.9e-31  Score=243.96  Aligned_cols=254  Identities=19%  Similarity=0.201  Sum_probs=189.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCCcc--hhh-hhc-------------------CCCCeeEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKD--NLR-KWI-------------------GHPRFELI   86 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~--~~~-~~~-------------------~~~~~~~~   86 (346)
                      .+++|||||||||||++|+++|++.+.  .+|+++.|.......  .+. ++.                   ...++.++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            468999999999999999999998752  478999996542211  111 110                   01578999


Q ss_pred             ecccCCcc------------cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccC
Q 019060           87 RHDVTEPL------------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYG  152 (346)
Q Consensus        87 ~~d~~~~~------------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~  152 (346)
                      .+|+.++.            ..++|+|||+|+....   ..++......|+.++.+++++|++. ++ +|||+||+++||
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG  166 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCG  166 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEec
Confidence            99998432            1269999999987653   3567888999999999999999986 45 799999999998


Q ss_pred             CCCCCCCCCCCcCCCC-----------------------------------------------CCCCCCchHHhHHHHHH
Q 019060          153 DPLVHPQDESYWGNVN-----------------------------------------------PIGVRSCYDEGKRVAET  185 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~-----------------------------------------------~~~~~~~Y~~sK~~~E~  185 (346)
                      ...+ ...|..++...                                               ...+.+.|+.+|.++|.
T Consensus       167 ~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~  245 (491)
T PLN02996        167 EKSG-LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEM  245 (491)
T ss_pred             CCCc-eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHH
Confidence            6432 12222111000                                               11234679999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCc-----cHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-----RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ++..++.  +++++|+||++||||+..+..+     .....++.....|....++++++..+|++||+|++++++.++..
T Consensus       246 lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~  323 (491)
T PLN02996        246 LLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAA  323 (491)
T ss_pred             HHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHH
Confidence            9987753  7999999999999998655321     12234455556677667788999999999999999999998875


Q ss_pred             C-----CCCcEEecCC--CCCCHHHHHHHHHHHcCCC
Q 019060          261 E-----NTGPINIGNP--GEFTMLELAENVKELINPN  290 (346)
Q Consensus       261 ~-----~~~~~~~~~~--~~~s~~ei~~~i~~~~g~~  290 (346)
                      .     ..++||++++  .++|+.|+++.+.+.++..
T Consensus       324 ~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~  360 (491)
T PLN02996        324 HAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKN  360 (491)
T ss_pred             hhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhC
Confidence            2     2458999998  8999999999999988743

>PLN02583 cinnamoyl-CoA reductase

Probab=99.98  E-value=2e-30  Score=228.54  Aligned_cols=274  Identities=16%  Similarity=0.144  Sum_probs=190.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc--chhhhhc-CCCCeeEEecccCCccc-----CCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWI-GHPRFELIRHDVTEPLL-----IEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~-~~~~~~~~~~d~~~~~~-----~~~d~vi  102 (346)
                      .+++|||||||||||++++++|+++| |+|+++.|+.....  ..+.... ...++.++.+|+++...     .++|.|+
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~   83 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRG-YTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF   83 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence            46799999999999999999999999 99999988532111  1111111 12368889999998743     3799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccC--CC---CCCCCCCCCcCCCC-CCCCCC
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYG--DP---LVHPQDESYWGNVN-PIGVRS  174 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~--~~---~~~~~~e~~~~~~~-~~~~~~  174 (346)
                      |.++....  ........+++|+.++.+++++|.+. ++ |||++||..++.  ..   ...+.+|+.|.+.. ...+..
T Consensus        84 ~~~~~~~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  161 (297)
T PLN02583         84 CCFDPPSD--YPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL  161 (297)
T ss_pred             EeCccCCc--ccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence            98754321  12245678999999999999999886 45 899999987643  11   12356676543211 111223


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      .|+.+|..+|+.++.+++..+++++++||+++|||+.....    .     .+.+.. ....  ...++|||++|+|+++
T Consensus       162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~----~-----~~~~~~-~~~~--~~~~~~v~V~Dva~a~  229 (297)
T PLN02583        162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN----P-----YLKGAA-QMYE--NGVLVTVDVNFLVDAH  229 (297)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch----h-----hhcCCc-ccCc--ccCcceEEHHHHHHHH
Confidence            69999999999999998878999999999999999753211    1     122221 1112  2346899999999999


Q ss_pred             HHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEc-cCCCCCCCcccCChHHHHhhcCCcc
Q 019060          255 IRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMV-ENTPDDPRQRKPDITKATELLGWEP  321 (346)
Q Consensus       255 ~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~-~~~~~~~~~~~~~~~k~~~~lg~~p  321 (346)
                      +.+++.+. .|.|++.++....+.++++++.+.+.. .++... +..........++++|+++ ||++.
T Consensus       230 ~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~k~~~-l~~~~  296 (297)
T PLN02583        230 IRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPL-IPSPPPYEMQGSEVYQQRIRNKKLNK-LMEDF  296 (297)
T ss_pred             HHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCC-CCCCCcccccCCCccccccChHHHHH-hCccc
Confidence            99999766 667888876655678899999998853 322211 1111122345678999865 88763

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=1.1e-29  Score=231.09  Aligned_cols=235  Identities=19%  Similarity=0.203  Sum_probs=181.5

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch--hhhh-cCCCCeeEEecccCCcccC--------
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKW-IGHPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--~~~~-~~~~~~~~~~~d~~~~~~~--------   96 (346)
                      ....+|+|||||||||||++++++|+++| ++|++++|+.......  .... ...++++++.+|++|.+..        
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~  134 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRG-YNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG  134 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence            34557899999999999999999999999 9999999965322110  0111 1124788999999987532        


Q ss_pred             -CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                       ++|+|||+++....     .....+++|..++.+++++|++.++ |||++||.++++                   |..
T Consensus       135 ~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~-------------------p~~  190 (390)
T PLN02657        135 DPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK-------------------PLL  190 (390)
T ss_pred             CCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC-------------------cch
Confidence             48999999874321     1123457899999999999999987 899999987752                   123


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee-ecccHHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR-SFCYVSDMVDG  253 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~Dva~~  253 (346)
                      .|..+|...|..+..  ...+++++|+||+.+||+.         ..++..+..++++.++++++..+ ++||++|+|++
T Consensus       191 ~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~---------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~  259 (390)
T PLN02657        191 EFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL---------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASF  259 (390)
T ss_pred             HHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc---------HHHHHhhccCCceEEecCCcccccCceeHHHHHHH
Confidence            588999999998865  3468999999999999752         23445566788877778777544 68999999999


Q ss_pred             HHHHHhCCC--CCcEEecCC-CCCCHHHHHHHHHHHcCCCcceEEccC
Q 019060          254 LIRLMEGEN--TGPINIGNP-GEFTMLELAENVKELINPNVEITMVEN  298 (346)
Q Consensus       254 i~~~~~~~~--~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~~~~~~  298 (346)
                      ++.++..+.  +++||++++ +.+|+.|+++.+.+.+|++.++..++.
T Consensus       260 i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~  307 (390)
T PLN02657        260 IADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPI  307 (390)
T ss_pred             HHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCH
Confidence            999987654  679999986 689999999999999999877776553

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.97  E-value=8.7e-31  Score=221.96  Aligned_cols=240  Identities=26%  Similarity=0.350  Sum_probs=177.7

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeE----EecccCCccc-------CCCCE
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFEL----IRHDVTEPLL-------IEVDQ  100 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~----~~~d~~~~~~-------~~~d~  100 (346)
                      ||||||+|.||+.|+++|++.++.++++++|+......-..++   ...+++++    +-+|+.|...       .++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            7999999999999999999999789999998643222222222   12334543    5888888643       27999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHh
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      |||+|+.-+....+.+|.+.+..|+.|+.+++++|.+.++ +||++||.-+                   ..|.+.||.+
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA-------------------v~PtnvmGat  141 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA-------------------VNPTNVMGAT  141 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC-------------------SS--SHHHHH
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc-------------------CCCCcHHHHH
Confidence            9999999888888999999999999999999999999999 9999999854                   3566889999


Q ss_pred             HHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       180 K~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      |+.+|.++..++...   +..++++|+|+|.|..     +++++.|.+++..|+++.+ .+++..+-|+.+++.++.++.
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~  215 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQ  215 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHH
Confidence            999999999887665   5789999999999974     8899999999999999988 566888999999999999999


Q ss_pred             HHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC------CcceEEccCC
Q 019060          257 LMEGEN-TGPINIGNPGEFTMLELAENVKELINP------NVEITMVENT  299 (346)
Q Consensus       257 ~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~------~~~~~~~~~~  299 (346)
                      ++.... +++|.+--|+++++.|+++.+.+..|.      +.++.+....
T Consensus       216 a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g~~~~~~~~i~I~~~GlR  265 (293)
T PF02719_consen  216 AAALAKGGEIFVLDMGEPVKILDLAEAMIELSGLEPGKKPDIPIKFTGLR  265 (293)
T ss_dssp             HHHH--TTEEEEE---TCEECCCHHHHHHHHTT-EEEESSSS-EEE----
T ss_pred             HHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcccccccCCCcceEEcCCC
Confidence            887655 568888888999999999999999984      4455555443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.97  E-value=2.2e-29  Score=206.88  Aligned_cols=277  Identities=18%  Similarity=0.253  Sum_probs=197.9

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc--c
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI--F  112 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~--~  112 (346)
                      |+|||||||||++|+..|.+.| |+|++++|+.+........     .+.. .-.+.+....++|+|||+||..-..  +
T Consensus         1 IliTGgTGlIG~~L~~~L~~~g-h~v~iltR~~~~~~~~~~~-----~v~~-~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGG-HQVTILTRRPPKASQNLHP-----NVTL-WEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCC-CeEEEEEcCCcchhhhcCc-----cccc-cchhhhcccCCCCEEEECCCCccccccC
Confidence            6899999999999999999999 9999999987555443321     1221 1122233333799999999954322  3


Q ss_pred             cccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHH
Q 019060          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (346)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (346)
                      .....+..++.-+..|..++++..+...   .+|--|.+..||......++|+.     +. ..+.-+......|.....
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-----~~-g~~Fla~lc~~WE~~a~~  147 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-----PP-GDDFLAQLCQDWEEEALQ  147 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-----CC-CCChHHHHHHHHHHHHhh
Confidence            4455667778889999999998886553   35555555679988888888882     22 224456666777776654


Q ss_pred             HHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHH--cCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CCcE
Q 019060          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI--RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPI  266 (346)
Q Consensus       190 ~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~~~  266 (346)
                      . +..+.+++++|.|.|.++.     +.++..++....  .|.++   |++.++++|||++|++++|..+++++. .|.|
T Consensus       148 a-~~~gtRvvllRtGvVLs~~-----GGaL~~m~~~fk~glGG~~---GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~  218 (297)
T COG1090         148 A-QQLGTRVVLLRTGVVLSPD-----GGALGKMLPLFKLGLGGKL---GSGRQWFSWIHIEDLVNAILFLLENEQLSGPF  218 (297)
T ss_pred             h-hhcCceEEEEEEEEEecCC-----CcchhhhcchhhhccCCcc---CCCCceeeeeeHHHHHHHHHHHHhCcCCCCcc
Confidence            3 3458999999999999985     445555544333  23433   789999999999999999999999977 9999


Q ss_pred             EecCCCCCCHHHHHHHHHHHcCCCcceEEccCC----CCCCCcccCC-----hHHHHhhcCCcccc-cHHhHHHHHHH
Q 019060          267 NIGNPGEFTMLELAENVKELINPNVEITMVENT----PDDPRQRKPD-----ITKATELLGWEPKI-KLRDGLPLMED  334 (346)
Q Consensus       267 ~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~-----~~k~~~~lg~~p~~-~~~e~i~~~~~  334 (346)
                      |+++|.|++..+|...+.+.++++..+...+..    -.......++     ..|+. ..||++++ ++++++.+.++
T Consensus       219 N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~-~aGF~F~y~dl~~AL~~il~  295 (297)
T COG1090         219 NLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLE-AAGFQFQYPDLEEALADILK  295 (297)
T ss_pred             cccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHH-HCCCeeecCCHHHHHHHHHh
Confidence            999999999999999999999977655432210    0011111222     34443 35888887 89999988775

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.97  E-value=4.7e-29  Score=224.25  Aligned_cols=233  Identities=26%  Similarity=0.345  Sum_probs=202.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC-------CCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI-------EVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~-------~~d~  100 (346)
                      .+|+||||||+|-||+.+|+++++.++.++++++|+..+-..-..++   .....+.++-+|+.|.+..       ++|+
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            47999999999999999999999999889999998653322222222   2246788999999997543       5999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHh
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      |||+|+.-+....+.+|.+.+..|+.|+.|++++|.+.++ +||++||.-                   ...|.+.||.+
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK-------------------AV~PtNvmGaT  389 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK-------------------AVNPTNVMGAT  389 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc-------------------ccCCchHhhHH
Confidence            9999999888889999999999999999999999999999 899999974                   34667889999


Q ss_pred             HHHHHHHHHHHHHHhC---CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQHG---IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~---~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      |+.+|.++..+..+..   ..++++|.|+|.|..     ++.++-+.+++.+|+++.+ .+++..+-|+.+.|.++.++.
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlq  463 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQ  463 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHH
Confidence            9999999998877433   789999999999984     8899999999999999988 678888999999999999999


Q ss_pred             HHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcC
Q 019060          257 LMEGEN-TGPINIGNPGEFTMLELAENVKELIN  288 (346)
Q Consensus       257 ~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g  288 (346)
                      +..... +++|.+--|++++..|+++.+.+.+|
T Consensus       464 A~a~~~gGeifvldMGepvkI~dLAk~mi~l~g  496 (588)
T COG1086         464 AGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAG  496 (588)
T ss_pred             HHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence            887766 55788888999999999999999998

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.96  E-value=7.1e-28  Score=234.65  Aligned_cols=263  Identities=17%  Similarity=0.235  Sum_probs=186.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEE-EEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      +.||||||||+||||++|++.|.+.| ++|. ...+-  .....+            ..++   ...++|+|||+|+..+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g-~~v~~~~~~l--~d~~~v------------~~~i---~~~~pd~Vih~Aa~~~  440 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQG-IAYEYGKGRL--EDRSSL------------LADI---RNVKPTHVFNAAGVTG  440 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCC-CeEEeecccc--ccHHHH------------HHHH---HhhCCCEEEECCcccC
Confidence            56899999999999999999999999 8874 22210  000011            1111   1136999999999764


Q ss_pred             c---cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCC------CCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          110 P---IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL------VHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       110 ~---~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~------~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      .   ..++.++...+.+|+.++.+++++|++.++++|++||..+|+...      ..+++|++    .+..+.+.|+.+|
T Consensus       441 ~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg~sK  516 (668)
T PLN02260        441 RPNVDWCESHKVETIRANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYSKTK  516 (668)
T ss_pred             CCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhhHHH
Confidence            2   234568899999999999999999999999889999999987421      23566663    2333447899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      .++|.+++.+.     ++.++|+.++||.+.. ...++    +..++.... +.+      ..+..+++|++.+++.+++
T Consensus       517 ~~~E~~~~~~~-----~~~~~r~~~~~~~~~~-~~~nf----v~~~~~~~~~~~v------p~~~~~~~~~~~~~~~l~~  580 (668)
T PLN02260        517 AMVEELLREYD-----NVCTLRVRMPISSDLS-NPRNF----ITKISRYNKVVNI------PNSMTVLDELLPISIEMAK  580 (668)
T ss_pred             HHHHHHHHhhh-----hheEEEEEEecccCCC-CccHH----HHHHhccceeecc------CCCceehhhHHHHHHHHHH
Confidence            99999997763     3668888888865322 11233    444333333 222      1346778889988888887


Q ss_pred             CCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEc---c----CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          260 GENTGPINIGNPGEFTMLELAENVKELINPNVEITMV---E----NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       260 ~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~---~----~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      ....|+||+++++.+|+.|+++.+.+.++....+...   +    .....+.. .+|++|+++.+|. +. +|+|+++++
T Consensus       581 ~~~~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~-~l~~~k~~~~~~~-~~-~~~~~l~~~  657 (668)
T PLN02260        581 RNLRGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNN-EMDASKLKKEFPE-LL-SIKESLIKY  657 (668)
T ss_pred             hCCCceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccc-cccHHHHHHhCcc-cc-chHHHHHHH
Confidence            5557999999999999999999999988533211111   1    11123334 7999999988898 66 899999988


Q ss_pred             HH
Q 019060          333 ED  334 (346)
Q Consensus       333 ~~  334 (346)
                      +.
T Consensus       658 ~~  659 (668)
T PLN02260        658 VF  659 (668)
T ss_pred             Hh
Confidence            75

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.96  E-value=1.6e-27  Score=216.78  Aligned_cols=252  Identities=22%  Similarity=0.279  Sum_probs=181.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCc--chhhhhc----------CCCCeeEEecccCCccc-----
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSK--DNLRKWI----------GHPRFELIRHDVTEPLL-----   95 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~--~~~~~~~----------~~~~~~~~~~d~~~~~~-----   95 (346)
                      +|||||||||||++|+++|+++|. ++|+++.|+.....  +.+.+.+          ...++.++.+|+.++.+     
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            589999999999999999999983 46999998653211  0111100          00478899999886532     


Q ss_pred             ------CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           96 ------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        96 ------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                            .++|+|||+|+....   ........+.|+.++.+++++|.+.++ +|+++||..+|+.....+..|+......
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~  157 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTP  157 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCcccccccccc
Confidence                  269999999986542   234566778999999999999999887 6999999999976443333333221111


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ...+.+.|+.+|..+|.+++.+.+. +++++++||+.+||+.....  ...++..++......+..+  .......++++
T Consensus       158 ~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~  234 (367)
T TIGR01746       158 PPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYP--DSPELTEDLTP  234 (367)
T ss_pred             ccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCC--CCCccccCccc
Confidence            2233467999999999999887655 89999999999999743221  1234445555444333222  11223578999


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHcCCCcc
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELINPNVE  292 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~  292 (346)
                      ++|+|++++.++..+.    +++||+++++++++.|+++.+.+ +|.+.+
T Consensus       235 vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~  283 (367)
T TIGR01746       235 VDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK  283 (367)
T ss_pred             HHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence            9999999999887654    56899999999999999999999 786654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.95  E-value=5.5e-27  Score=188.50  Aligned_cols=299  Identities=21%  Similarity=0.260  Sum_probs=230.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC-CcchhhhhcCC------CCeeEEecccCCcccC-------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIGH------PRFELIRHDVTEPLLI-------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~~------~~~~~~~~d~~~~~~~-------   96 (346)
                      ..+..||||-||.=|++|++.|+..| |+|.++.|.++. +...+..+...      ...++..+|++|..++       
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~Kg-YeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKG-YEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCC-ceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            35678999999999999999999999 999988775433 33333333332      3577889999997554       


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC----CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      +++-|+|+|+..+...+.+-++-..++...|+.+++++.+..+    +||...||...||+-.+.|..|.     .|+.|
T Consensus       106 kPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~-----TPFyP  180 (376)
T KOG1372|consen  106 KPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSET-----TPFYP  180 (376)
T ss_pred             CchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccC-----CCCCC
Confidence            7999999999887776777777777888999999999998876    48999999999999999999999     89999


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHH----HHHHHHHcCCC-eEEecCCcceeecccH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS----NFIAQAIRGEP-LTVQAPGTQTRSFCYV  247 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~v~v  247 (346)
                      .++|+.+|..+-.++..+.+.+++-.+.--+.+--.|.++   .+|+.    .-+..+..|+. -...++-+..+||-|.
T Consensus       181 RSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRG---enFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA  257 (376)
T KOG1372|consen  181 RSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRG---ENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHA  257 (376)
T ss_pred             CChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccc---cchhhHHHHHHHHHhhhcceeeEEecchhhhcccchh
Confidence            9999999999999988888887764332223333344432   33433    33333333432 3334677888999999


Q ss_pred             HHHHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEE---------------cc-----CCCCCCCccc
Q 019060          248 SDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM---------------VE-----NTPDDPRQRK  307 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~---------------~~-----~~~~~~~~~~  307 (346)
                      .|-++++..+++++....|.++.++..|++|+++......|....++-               +.     ..|.......
T Consensus       258 ~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~Lq  337 (376)
T KOG1372|consen  258 GDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQ  337 (376)
T ss_pred             HHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhc
Confidence            999999999999999999999999999999999999999986655541               11     1122223345


Q ss_pred             CChHHHHhhcCCcccccHHhHHHHHHHHHHH
Q 019060          308 PDITKATELLGWEPKIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       308 ~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~  338 (346)
                      .|.+|+++.|||+|++++++.+++|++.=.+
T Consensus       338 GdasKAk~~LgW~pkv~f~eLVkeMv~~Die  368 (376)
T KOG1372|consen  338 GDASKAKKTLGWKPKVTFPELVKEMVASDIE  368 (376)
T ss_pred             CChHHHHHhhCCCCccCHHHHHHHHHHhHHH
Confidence            5899999999999999999999999975433

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=1.7e-26  Score=219.01  Aligned_cols=234  Identities=21%  Similarity=0.328  Sum_probs=173.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc----CCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----IEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----~~~d~vi~~a~~~  108 (346)
                      ||||||||+||||++|+++|++.| |+|++++|....        ....+++++.+|+.+...    .++|+|||+|+..
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G-~~Vi~ldr~~~~--------~~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~   71 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAG-HTVSGIAQHPHD--------ALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVD   71 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCChhh--------cccCCceEEEccCCCHHHHHHhcCCCEEEEcCccC
Confidence            689999999999999999999999 999999985321        112468899999988642    3799999999753


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                      ..     .   ....|+.++.+++++|++.++|+||+||.  +|.+      +             .|.    .+|.++.
T Consensus        72 ~~-----~---~~~vNv~Gt~nLleAA~~~GvRiV~~SS~--~G~~------~-------------~~~----~aE~ll~  118 (699)
T PRK12320         72 TS-----A---PGGVGITGLAHVANAAARAGARLLFVSQA--AGRP------E-------------LYR----QAETLVS  118 (699)
T ss_pred             cc-----c---hhhHHHHHHHHHHHHHHHcCCeEEEEECC--CCCC------c-------------ccc----HHHHHHH
Confidence            21     1   12579999999999999999999999986  3311      0             122    3676653


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEe
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINI  268 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~  268 (346)
                      .    +.++++++|++++|||+......+++..++.....++++.          ++|++|++++++.+++....|+||+
T Consensus       119 ~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~----------vIyVdDvv~alv~al~~~~~GiyNI  184 (699)
T PRK12320        119 T----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIR----------VLHLDDLVRFLVLALNTDRNGVVDL  184 (699)
T ss_pred             h----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceE----------EEEHHHHHHHHHHHHhCCCCCEEEE
Confidence            3    4689999999999999754333456666666555555443          4899999999999998766789999


Q ss_pred             cCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHh
Q 019060          269 GNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRD  327 (346)
Q Consensus       269 ~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e  327 (346)
                      ++++.+|+.|+++.+.... ....+.    ....+.....+.+.....++|.|++.++.
T Consensus       185 G~~~~~Si~el~~~i~~~~-p~~~~~----~~~~~~~~~pdi~~a~~~~~w~~~~~~~~  238 (699)
T PRK12320        185 ATPDTTNVVTAWRLLRSVD-PHLRTR----RVRSWEQLIPEVDIAAVQEDWNFEFGWQA  238 (699)
T ss_pred             eCCCeeEHHHHHHHHHHhC-CCcccc----ccccHHHhCCCCchhhhhcCCCCcchHHH
Confidence            9999999999999987762 222221    11233345567777777889999987654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.94  E-value=1.3e-26  Score=199.05  Aligned_cols=214  Identities=24%  Similarity=0.274  Sum_probs=128.5

Q ss_pred             EEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCC--Ccchhhhhc------------CCCCeeEEecccCCcccC-----
Q 019060           37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTG--SKDNLRKWI------------GHPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        37 ItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~--~~~~~~~~~------------~~~~~~~~~~d~~~~~~~-----   96 (346)
                      |||||||+|++|+++|++.+. .+|+++.|....  ..+.+.+.+            ...++.++.+|+.++.+-     
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999983 289999996532  111221111            156899999999997532     


Q ss_pred             ------CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCC-----CCc
Q 019060           97 ------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDE-----SYW  164 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e-----~~~  164 (346)
                            ++|+|||+|+..+..   .......+.|+.++.++++.|.+.+. +|+|+||+.+.+..... ..|     ...
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~-~~~~~~~~~~~  156 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGT-IEEKVYPEEED  156 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT---SSS-HHH--
T ss_pred             hhccccccceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCc-ccccccccccc
Confidence                  599999999876543   34455778999999999999997664 89999996565543322 211     111


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCC-C-CccHHHHHHHHHHc-CCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI-D-DGRVVSNFIAQAIR-GEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~  241 (346)
                      .........+.|..||+.+|++++.+.++.+++++|+||+.|+|..... . ...++..++..... +......+..+..
T Consensus       157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  236 (249)
T PF07993_consen  157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDAR  236 (249)
T ss_dssp             EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT
T ss_pred             cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCce
Confidence            1112344457899999999999999988889999999999999943221 1 13434555544444 3333354555667


Q ss_pred             eecccHHHHHHHH
Q 019060          242 RSFCYVSDMVDGL  254 (346)
Q Consensus       242 ~~~v~v~Dva~~i  254 (346)
                      +++++||.+|++|
T Consensus       237 ~d~vPVD~va~aI  249 (249)
T PF07993_consen  237 LDLVPVDYVARAI  249 (249)
T ss_dssp             --EEEHHHHHHHH
T ss_pred             EeEECHHHHHhhC
Confidence            9999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.94  E-value=5.7e-25  Score=206.45  Aligned_cols=253  Identities=18%  Similarity=0.180  Sum_probs=180.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCC--cchhh-hhc-------------------CCCCeeEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGS--KDNLR-KWI-------------------GHPRFELI   86 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~--~~~~~-~~~-------------------~~~~~~~~   86 (346)
                      .+|+|||||||||||++|+++|++.+.  .+|+++.|.....  .+.+. .+.                   ...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            468999999999999999999998763  3789999864321  11111 110                   02468889


Q ss_pred             ecccCCccc-----------CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCC
Q 019060           87 RHDVTEPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGD  153 (346)
Q Consensus        87 ~~d~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~  153 (346)
                      .+|++++.+           .++|+|||+|+....   ..++...++.|+.++.+++++|++.+ . +|||+||++|||.
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~  274 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQ  274 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecC
Confidence            999998731           259999999987642   35678889999999999999998875 3 7999999999986


Q ss_pred             CCCCCCCCCCcCCC--------------------C----------------------------------CCCCCCchHHh
Q 019060          154 PLVHPQDESYWGNV--------------------N----------------------------------PIGVRSCYDEG  179 (346)
Q Consensus       154 ~~~~~~~e~~~~~~--------------------~----------------------------------~~~~~~~Y~~s  179 (346)
                      ..+ .+.|..++..                    +                                  .....+.|..+
T Consensus       275 ~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~T  353 (605)
T PLN02503        275 RQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFT  353 (605)
T ss_pred             CCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHH
Confidence            532 3333333200                    0                                  01223789999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC----Cc-cHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID----DG-RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      |..+|.+++...  .+++++|+||+.|.+....+.    .+ ......+.....|..-...++++...|+|+||.|++++
T Consensus       354 K~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~  431 (605)
T PLN02503        354 KAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNAT  431 (605)
T ss_pred             HHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHH
Confidence            999999998654  479999999999944222111    11 11111222223444344668889999999999999999


Q ss_pred             HHHHhC----C--CCCcEEecCC--CCCCHHHHHHHHHHHcCC
Q 019060          255 IRLMEG----E--NTGPINIGNP--GEFTMLELAENVKELINP  289 (346)
Q Consensus       255 ~~~~~~----~--~~~~~~~~~~--~~~s~~ei~~~i~~~~g~  289 (346)
                      +.++..    .  ...+||++++  .++++.++.+.+.+.+..
T Consensus       432 i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~  474 (605)
T PLN02503        432 LAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS  474 (605)
T ss_pred             HHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence            988432    1  2569999988  899999999999987753

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.93  E-value=3.8e-25  Score=194.22  Aligned_cols=244  Identities=16%  Similarity=0.177  Sum_probs=169.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----------CC-CCEE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IE-VDQI  101 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~-~d~v  101 (346)
                      +||||||||+||++++++|++.| ++|++++|+.....        ..++..+.+|+.|.+.           .+ +|.|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g-~~V~~~~R~~~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAAS-VPFLVASRSSSSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCC-CcEEEEeCCCcccc--------CCCCccccccCCCHHHHHHHHhcccCcCCceeEE
Confidence            58999999999999999999999 99999999753221        1356677888888643           25 8999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      +|+++...     .        ......+++++|++.|+ |||++||..++..                 .      ..+
T Consensus        72 ~~~~~~~~-----~--------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~-----------------~------~~~  115 (285)
T TIGR03649        72 YLVAPPIP-----D--------LAPPMIKFIDFARSKGVRRFVLLSASIIEKG-----------------G------PAM  115 (285)
T ss_pred             EEeCCCCC-----C--------hhHHHHHHHHHHHHcCCCEEEEeeccccCCC-----------------C------chH
Confidence            99875321     0        12345689999999998 8999998654311                 0      012


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ...|++++.   ..+++++++||+++|+....    .   .....+.....+. .+.++..++|++++|+|++++.++..
T Consensus       116 ~~~~~~l~~---~~gi~~tilRp~~f~~~~~~----~---~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~  184 (285)
T TIGR03649       116 GQVHAHLDS---LGGVEYTVLRPTWFMENFSE----E---FHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTD  184 (285)
T ss_pred             HHHHHHHHh---ccCCCEEEEeccHHhhhhcc----c---ccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcC
Confidence            334544432   14899999999988864311    0   0111222333333 34567889999999999999999987


Q ss_pred             CC--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC--------CCCC----------------cccCChHHHH
Q 019060          261 EN--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP--------DDPR----------------QRKPDITKAT  314 (346)
Q Consensus       261 ~~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~--------~~~~----------------~~~~~~~k~~  314 (346)
                      +.  ++.|++.+++.+|+.|+++.+.+++|++.....++...        ..+.                .....++..+
T Consensus       185 ~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  264 (285)
T TIGR03649       185 KVAPNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVK  264 (285)
T ss_pred             CCcCCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHH
Confidence            64  57899999999999999999999999987766543210        0000                0011345567


Q ss_pred             hhcCCcccccHHhHHHHHHH
Q 019060          315 ELLGWEPKIKLRDGLPLMED  334 (346)
Q Consensus       315 ~~lg~~p~~~~~e~i~~~~~  334 (346)
                      +.+|.+|+ +|++.+++..+
T Consensus       265 ~~~G~~p~-~~~~~~~~~~~  283 (285)
T TIGR03649       265 AVTGSKPR-GFRDFAESNKA  283 (285)
T ss_pred             HHhCcCCc-cHHHHHHHhhh
Confidence            77898887 88888877643

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.91  E-value=1.1e-22  Score=213.98  Aligned_cols=252  Identities=19%  Similarity=0.193  Sum_probs=180.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC---CCeEEEEeCCCCCCcchhhhhc------------CCCCeeEEecccCCccc-
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE---KNEVIVVDNYFTGSKDNLRKWI------------GHPRFELIRHDVTEPLL-   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g---~~~V~~~~r~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~~~-   95 (346)
                      .++|||||||||+|++++++|++++   .++|+++.|...... ...+..            ...++.++.+|+.++.+ 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEA-GLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHH-HHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            4799999999999999999999876   378999998643211 111110            01368899999986532 


Q ss_pred             ----------CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC---------
Q 019060           96 ----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL---------  155 (346)
Q Consensus        96 ----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~---------  155 (346)
                                .++|+|||+|+..+.   ..........|+.++.+++++|++.++ +|+|+||.++|+...         
T Consensus      1050 l~~~~~~~l~~~~d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~ 1126 (1389)
T TIGR03443      1050 LSDEKWSDLTNEVDVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELV 1126 (1389)
T ss_pred             cCHHHHHHHHhcCCEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhh
Confidence                      269999999986542   233445556899999999999998876 899999999986421         


Q ss_pred             ---CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCC
Q 019060          156 ---VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGE  230 (346)
Q Consensus       156 ---~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~  230 (346)
                         .....|+.+....+..+.+.|+.+|+.+|.++..+.+. +++++++||+.|||+......  ..++..++......+
T Consensus      1127 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~ 1205 (1389)
T TIGR03443      1127 QAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG 1205 (1389)
T ss_pred             hccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC
Confidence               11233432222223334567999999999999887654 899999999999998654321  234555554433322


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHcCCCcc
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELINPNVE  292 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~  292 (346)
                      ..   .+....++|++++|+|++++.++..+.    ..+||+.++..+++.++++.+.+. |.+.+
T Consensus      1206 ~~---p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~ 1267 (1389)
T TIGR03443      1206 LI---PNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVE 1267 (1389)
T ss_pred             Cc---CCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCC
Confidence            22   233456899999999999999987653    247999999999999999999764 55443

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.91  E-value=1.4e-22  Score=174.86  Aligned_cols=246  Identities=20%  Similarity=0.221  Sum_probs=170.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--cchhhhh---------cCCCCeeEEecccCCcccC-----
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLRKW---------IGHPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~~~---------~~~~~~~~~~~d~~~~~~~-----   96 (346)
                      ++||+||||||+|.+|+.+|+.+-..+|+++.|..+..  .+.+.+.         ....+++.+.+|+..+.+-     
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            58999999999999999999998745999999965311  1112221         1245899999999976542     


Q ss_pred             ------CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCe-EEEEecccccCCCCCCCCCCC----CcC
Q 019060           97 ------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSEVYGDPLVHPQDES----YWG  165 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~i~~SS~~v~~~~~~~~~~e~----~~~  165 (346)
                            .+|.|||+|+..++   -..+.+....|+.|+..+++.|...+.| |+|+||++|+........+++    +..
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~  157 (382)
T COG3320          81 WQELAENVDLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPT  157 (382)
T ss_pred             HHHHhhhcceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccc
Confidence                  49999999987653   3456677789999999999999998765 999999999875443332222    111


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCC--CCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI--DDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      ...-..+.++|+.||+.+|.++++.... |++++|+|||+|-|.....  +...++..++.....-+.++.   .....+
T Consensus       158 ~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~---~~~~~~  233 (382)
T COG3320         158 RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD---SEYSLD  233 (382)
T ss_pred             ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC---cccchh
Confidence            1122345578999999999999998877 9999999999999987622  224556666666655444432   223345


Q ss_pred             cccHHHHHHHHH-----------HHHhCCC--CCcEE-ecCCCCCCHHHHHHHHHH
Q 019060          244 FCYVSDMVDGLI-----------RLMEGEN--TGPIN-IGNPGEFTMLELAENVKE  285 (346)
Q Consensus       244 ~v~v~Dva~~i~-----------~~~~~~~--~~~~~-~~~~~~~s~~ei~~~i~~  285 (346)
                      ++.++.+++++.           .+...+.  ...|+ ..-|..+...++.+-+.+
T Consensus       234 ~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~  289 (382)
T COG3320         234 MLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS  289 (382)
T ss_pred             hCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence            555555444433           3332221  23444 344788999999988887

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.91  E-value=1.1e-22  Score=162.72  Aligned_cols=297  Identities=18%  Similarity=0.196  Sum_probs=220.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe-CCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      ..+|||||+-|.+|..++..|...-..+-++++ -.++  +...     -..-.++..|+.|...+       ++|.+||
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP--p~~V-----~~~GPyIy~DILD~K~L~eIVVn~RIdWL~H  116 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP--PANV-----TDVGPYIYLDILDQKSLEEIVVNKRIDWLVH  116 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC--chhh-----cccCCchhhhhhccccHHHhhcccccceeee
Confidence            369999999999999999988776324434443 2211  1111     12456788888887544       5999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ..+..+ ...+.+......+|+.|..|+++.+++.+.++..-|+.++||..+...-+.+    .+...|.+.||+||--+
T Consensus       117 fSALLS-AvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPd----ltIQRPRTIYGVSKVHA  191 (366)
T KOG2774|consen  117 FSALLS-AVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPD----LTIQRPRTIYGVSKVHA  191 (366)
T ss_pred             HHHHHH-HhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCC----eeeecCceeechhHHHH
Confidence            887543 2344555667789999999999999999999999999999997664432222    25677899999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      |.+-+.+..+.++++.++|.+.+......... ..+-...+..++..++-.++-.++.+..++|.+|+-++++.++..+.
T Consensus       192 EL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~  271 (366)
T KOG2774|consen  192 ELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADS  271 (366)
T ss_pred             HHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCH
Confidence            99999999999999999999988754222111 23333444555555556677778899999999999999999887665


Q ss_pred             ----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC---CCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHH
Q 019060          263 ----TGPINIGNPGEFTMLELAENVKELINPNVEITMVENT---PDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD  335 (346)
Q Consensus       263 ----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~---~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~  335 (346)
                          ..+||+.+ ..++-.|+++.+.+++ +...+.+.+..   ..+.....+|.+.++.++.|+.++.+...+..+++.
T Consensus       272 ~~lkrr~ynvt~-~sftpee~~~~~~~~~-p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~~l~~~i~~~i~~  349 (366)
T KOG2774|consen  272 QSLKRRTYNVTG-FSFTPEEIADAIRRVM-PGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSLHLLSIISTVVAV  349 (366)
T ss_pred             HHhhhheeeece-eccCHHHHHHHHHhhC-CCceeecccchhhhhhhhcccccCchhHhhHHHHhhhhhHHHHHHHHHHH
Confidence                66899997 8899999999999998 44555544322   122334567889999999999988899999988887


Q ss_pred             HHHhhcC
Q 019060          336 FRLRLAV  342 (346)
Q Consensus       336 ~~~~~~~  342 (346)
                      .+.+.++
T Consensus       350 ~~~n~~~  356 (366)
T KOG2774|consen  350 HKSNLKL  356 (366)
T ss_pred             HHhhhhh
Confidence            7766543

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.7e-22  Score=176.61  Aligned_cols=230  Identities=17%  Similarity=0.188  Sum_probs=163.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      .|++|||||+|+||++++++|++.| +.|+++.|+.... ..+.... ..++.++.+|+++.+..            ++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g-~~v~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARG-DRVAATVRRPDAL-DDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999 9999999853211 1111111 23688899999987432            489


Q ss_pred             EEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||.......    ..+....+++|+.++.++++++    ++.+. ++|++||.....                +.
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  142 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQI----------------AY  142 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCccccc----------------CC
Confidence            99999997653322    2345678889999999999987    44454 899999975431                11


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccc---cCCCCCCCC-----ccHHHHHHHHHHcCCCeEEecCCc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNT---YGPRMNIDD-----GRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i---~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                      .+...|+.+|...|.+++.++.+   .+++++++||+.+   ||++.....     .......+......+.+.+     
T Consensus       143 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  217 (276)
T PRK06482        143 PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAI-----  217 (276)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCC-----
Confidence            23467999999999999988765   5899999999988   655432110     1111112222222222221     


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP  289 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~  289 (346)
                          +.+++|++++++.++..+. ...|++++++..+..|+++.+.+.++.
T Consensus       218 ----~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  264 (276)
T PRK06482        218 ----PGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALEA  264 (276)
T ss_pred             ----CCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHHH
Confidence                3578999999999998665 567999998888998888888877754

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.90  E-value=2.6e-22  Score=164.99  Aligned_cols=225  Identities=17%  Similarity=0.216  Sum_probs=178.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~a~~  107 (346)
                      -.+-|+|||||+|++++.+|.+.| .+|++--|.++...-.++-......+-+..-|+.|+++.     ...+|||+.|.
T Consensus        62 iVaTVFGAtGFlGryvvnklak~G-SQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr  140 (391)
T KOG2865|consen   62 IVATVFGATGFLGRYVVNKLAKMG-SQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR  140 (391)
T ss_pred             eEEEEecccccccHHHHHHHhhcC-CeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence            356789999999999999999999 999999987654433333323334678889999998776     48999999974


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      -    .+...-.+.++|+.+...|++.|++.|+ |||++|+...-                  ....+-|-.+|..+|..
T Consensus       141 d----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan------------------v~s~Sr~LrsK~~gE~a  198 (391)
T KOG2865|consen  141 D----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN------------------VKSPSRMLRSKAAGEEA  198 (391)
T ss_pred             c----cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc------------------ccChHHHHHhhhhhHHH
Confidence            2    2223334558899999999999999999 99999987621                  12225588999999999


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc-ceeecccHHHHHHHHHHHHhCCC--C
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT-QTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      +++..    .+.+|+||+.|||..     .+++..+.....+-+.+++++.+. ..-.+|||-|||.+|+.++..+.  +
T Consensus       199 Vrdaf----PeAtIirPa~iyG~e-----Drfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~G  269 (391)
T KOG2865|consen  199 VRDAF----PEATIIRPADIYGTE-----DRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMG  269 (391)
T ss_pred             HHhhC----Ccceeechhhhcccc-----hhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccC
Confidence            97653    468999999999985     456666666556567788887774 44589999999999999999887  6


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCC
Q 019060          264 GPINIGNPGEFTMLELAENVKELINP  289 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~  289 (346)
                      .+|.+++++.+.+.|+++.+-+....
T Consensus       270 ktye~vGP~~yql~eLvd~my~~~~~  295 (391)
T KOG2865|consen  270 KTYEFVGPDRYQLSELVDIMYDMARE  295 (391)
T ss_pred             ceeeecCCchhhHHHHHHHHHHHHhh
Confidence            68999999999999999999888754

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.89  E-value=6.4e-22  Score=170.34  Aligned_cols=221  Identities=18%  Similarity=0.229  Sum_probs=149.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-c-----c-CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-L-----L-IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-----~-~~~d~vi~~  104 (346)
                      +|+||||||||+||+.++++|+++| ++|+++.|+........   ....++.++.+|+.+. .     . .++|+|||+
T Consensus        17 ~~~ilItGasG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~   92 (251)
T PLN00141         17 TKTVFVAGATGRTGKRIVEQLLAKG-FAVKAGVRDVDKAKTSL---PQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA   92 (251)
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhc---ccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence            5799999999999999999999999 99999988642211111   1124688899999873 1     1 369999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ++.....    ++...++.|..++.++++++++.++ |||++||..+|+...+.+..+.+    ....+...|...|..+
T Consensus        93 ~g~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~----~~~~~~~~~~~~k~~~  164 (251)
T PLN00141         93 TGFRRSF----DPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAY----IFLNLFGLTLVAKLQA  164 (251)
T ss_pred             CCCCcCC----CCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcch----hHHHHHHHHHHHHHHH
Confidence            8753211    1222346788899999999998887 89999999998753322222111    0111112344568888


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-  262 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-  262 (346)
                      |++++    ..+++++++||+.+++....                +. ............+++.+|+|++++.++..+. 
T Consensus       165 e~~l~----~~gi~~~iirpg~~~~~~~~----------------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~  223 (251)
T PLN00141        165 EKYIR----KSGINYTIVRPGGLTNDPPT----------------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPES  223 (251)
T ss_pred             HHHHH----hcCCcEEEEECCCccCCCCC----------------ce-EEECCCCccccCcccHHHHHHHHHHHhcChhh
Confidence            87664    35899999999999976311                11 1111111122357999999999999998766 


Q ss_pred             -CCcEEecCC---CCCCHHHHHHHHHH
Q 019060          263 -TGPINIGNP---GEFTMLELAENVKE  285 (346)
Q Consensus       263 -~~~~~~~~~---~~~s~~ei~~~i~~  285 (346)
                       ..++.+.+.   ...++.+++..+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        224 SYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             cCcEEEEecCCCCCchhHHHHHHHhhc
Confidence             456777752   23688888887764

>PRK09135 pteridine reductase; Provisional

Probab=99.88  E-value=3.8e-21  Score=165.45  Aligned_cols=216  Identities=14%  Similarity=0.112  Sum_probs=148.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      +.++||||||+|+||++++++|+++| ++|++++|+...........+   ....+.++.+|+++.+..           
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAG-YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999999 999999986432222221111   113577899999986532           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|+|||+||......    ...++...++.|+.++.++++++...    +..++.++|....                
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------  147 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE----------------  147 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc----------------
Confidence             4899999998644321    22346778899999999999988642    2356666653221                


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      .+..+...|+.+|...|.+++.++.+.  +++++++||+.++||.....   +..........+..+.         .+.
T Consensus       148 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~  215 (249)
T PRK09135        148 RPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNS---FDEEARQAILARTPLK---------RIG  215 (249)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccccc---CCHHHHHHHHhcCCcC---------CCc
Confidence            244556789999999999999988775  58999999999999974321   1122222222222221         123


Q ss_pred             cHHHHHHHHHHHHhCCC---CCcEEecCCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~s  275 (346)
                      +++|+|+++..++....   +.+|++.++..++
T Consensus       216 ~~~d~a~~~~~~~~~~~~~~g~~~~i~~g~~~~  248 (249)
T PRK09135        216 TPEDIAEAVRFLLADASFITGQILAVDGGRSLT  248 (249)
T ss_pred             CHHHHHHHHHHHcCccccccCcEEEECCCeecc
Confidence            57999999976664332   5579999887654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.88  E-value=3.9e-21  Score=166.69  Aligned_cols=213  Identities=15%  Similarity=0.067  Sum_probs=147.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++|||||+|+||+++++.|+++| ++|++++|+.....+....... ...+.++.+|+.+....            .
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAG-AAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999 9999999865322222222211 12467899999986532            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHH----HHHHHHHH-HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLA-KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||++|......    ..+.....+++|+.+    +..+++++ +..+. ++|++||...+.               
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~---------------  149 (262)
T PRK13394         85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHE---------------  149 (262)
T ss_pred             CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcC---------------
Confidence            899999999754322    223456677889988    66666666 55555 899999975432               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHH-----------HHHHHcCCCeE
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNF-----------IAQAIRGEPLT  233 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~-----------~~~~~~~~~~~  233 (346)
                       +..+...|+.+|...+.+++.++.+   .+++++++||+.++++...    ..+...           +...+      
T Consensus       150 -~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~------  218 (262)
T PRK13394        150 -ASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD----KQIPEQAKELGISEEEVVKKVM------  218 (262)
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhh----hhhHhhhhccCCChHHHHHHHH------
Confidence             1122356999999999998888765   4789999999999988521    111111           11111      


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                        .......+|++++|++++++.++....    +..|++.++.
T Consensus       219 --~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        219 --LGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW  259 (262)
T ss_pred             --hcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence              122334689999999999999987543    3457776654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=7.1e-21  Score=163.63  Aligned_cols=214  Identities=16%  Similarity=0.103  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++|+||||||||+||++|+++|+++| +.|+++.|..............  ..++.++.+|+.+....            
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAG-ADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999 8988877754332222222111  24588899999987532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||++|......    ....+...+..|+.+..++++.+    ++.+. ++|++||...+..              
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~--------------  149 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG--------------  149 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC--------------
Confidence            5899999999654332    23345677889999999988877    44555 8999999876532              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|...|.+++.+++.   .+++++++||+.++++.....   ........   ....       ....+
T Consensus       150 --~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~---~~~~~~~~---~~~~-------~~~~~  214 (249)
T PRK12825        150 --WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT---IEEAREAK---DAET-------PLGRS  214 (249)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc---cchhHHhh---hccC-------CCCCC
Confidence              122356999999999998877665   489999999999999863221   11111110   0001       12238


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ++.+|+++++..++....    +..|++.++..+
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        215 GTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            999999999999997643    567898887654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.87  E-value=2.3e-21  Score=158.87  Aligned_cols=177  Identities=28%  Similarity=0.406  Sum_probs=133.4

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccCCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACPAS  109 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~~~  109 (346)
                      |+|+||||++|+.++++|+++| ++|+++.|+..+..    .   ..+++.+.+|+.+...     .++|+||++++...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~-~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRG-HEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCC-CEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhc
Confidence            7999999999999999999999 99999999653222    2   4689999999999743     37999999996543


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                      .             ....+.++++++++.++ |+|++||..+|.........+.      .... ..|...|..+|+.++
T Consensus        73 ~-------------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~e~~~~  132 (183)
T PF13460_consen   73 K-------------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDED------KPIF-PEYARDKREAEEALR  132 (183)
T ss_dssp             T-------------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGT------CGGG-HHHHHHHHHHHHHHH
T ss_pred             c-------------cccccccccccccccccccceeeeccccCCCCCccccccc------ccch-hhhHHHHHHHHHHHH
Confidence            2             16778899999999998 9999999999874333211111      1111 468888988888773


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                          .++++++++||+.+||+....  ..              + ....+....++|+.+|+|++++.++++
T Consensus       133 ----~~~~~~~ivrp~~~~~~~~~~--~~--------------~-~~~~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  133 ----ESGLNWTIVRPGWIYGNPSRS--YR--------------L-IKEGGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             ----HSTSEEEEEEESEEEBTTSSS--EE--------------E-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             ----hcCCCEEEEECcEeEeCCCcc--ee--------------E-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence                458999999999999986321  11              1 001334556999999999999998864

...

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.87  E-value=1.1e-20  Score=162.86  Aligned_cols=215  Identities=18%  Similarity=0.101  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++|+||||||+|+||++++++|+++| ++|++++|+............. ...+.++.+|+.+....            .
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADG-AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 9999999864322221111111 23478899999986432            5


Q ss_pred             CCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+++.....    ....++...++.|+.++.++++++.    +.+. +||++||...++.               
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------  148 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV---------------  148 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc---------------
Confidence            89999999876542    2234567788999999999988763    3344 8999999876511               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...|.+++.++..   .+++++++||+.++||.........+   ........++         ..++
T Consensus       149 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~  216 (251)
T PRK12826        149 GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW---AEAIAAAIPL---------GRLG  216 (251)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH---HHHHHhcCCC---------CCCc
Confidence            1222356999999999999887665   37899999999999986432111111   1111111111         1578


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++|+|+++..++..+.    ++.|++.++..
T Consensus       217 ~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        217 EPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            99999999999887543    45788876543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.86  E-value=2e-20  Score=161.54  Aligned_cols=216  Identities=19%  Similarity=0.134  Sum_probs=147.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCccc------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------IE   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~------------~~   97 (346)
                      ++++|||||+|+||++++++|+++| ++|++++|+.... ..+...+  ...++.++.+|+.+.+.            .+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g-~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAG-ANVVVNDLGEAGA-EAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999 8999999864221 1222111  12357889999998752            25


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+++......    ...+....+..|..++..+++++    ++.++ ++|++||...+..               
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~---------------  143 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA---------------  143 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC---------------
Confidence            899999998754322    12234566778999988887776    45555 8999999765532               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeE-------EecCC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT-------VQAPG  238 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~  238 (346)
                       ......|+.+|...|.+++.++.+   .+++++++||+.++++..    ...+..    ........       .....
T Consensus       144 -~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~  214 (255)
T TIGR01963       144 -SPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV----EKQIAD----QAKTRGIPEEQVIREVMLPG  214 (255)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH----HHHHHh----hhcccCCCchHHHHHHHHcc
Confidence             112256999999999998877654   378999999999998741    111111    11111110       00112


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ....++++++|+|++++.+++...    ++.|++.++..
T Consensus       215 ~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       215 QPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             CccccCcCHHHHHHHHHHHcCccccCccceEEEEcCccc
Confidence            344679999999999999997642    45688877654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.1e-20  Score=161.56  Aligned_cols=230  Identities=17%  Similarity=0.099  Sum_probs=159.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||+++++.|+++| ++|++++|+.............   ..++.++.+|+.+....           
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAG-AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 9999999864222111111111   23678889999986432           


Q ss_pred             -CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||.....     ...++....++.|+.+...+++++.+.    + .+||++||...+.             
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~-------------  151 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASN-------------  151 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcC-------------
Confidence             589999999854211     122345677889999999998866432    2 3899999987652             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                         +..+...|+.+|.+.|.+++.++.+.   +++++++||+.+.++........  ...........+         ..
T Consensus       152 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~  217 (276)
T PRK05875        152 ---THRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES--PELSADYRACTP---------LP  217 (276)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC--HHHHHHHHcCCC---------CC
Confidence               22234679999999999999887664   58899999999877642211000  111111111111         12


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC----CHHHHHHHHHHHcC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF----TMLELAENVKELIN  288 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~----s~~ei~~~i~~~~g  288 (346)
                      .+.+++|+|++++.+++.+.    +.++++.+++.+    +..|+++.+.+..|
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  271 (276)
T PRK05875        218 RVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG  271 (276)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence            46789999999999998654    457999888776    77777777765544

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.1e-20  Score=163.23  Aligned_cols=228  Identities=13%  Similarity=0.120  Sum_probs=158.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++||||||+|+||++++++|+++| ++|++++|+..... .+.... ...+.++++|+++.+..            ++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERG-DRVVATARDTATLA-DLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999 99999998642211 111111 23577889999986442            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++.+.+++|+.++..+++++    ++.+. ++|++||...+..                
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------  142 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISA----------------  142 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCC----------------
Confidence            99999999764322    23466788899999988877765    45554 8999999876642                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc-----cHHHHHHHHHHcCCCeEEecCCcce
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG-----RVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                      ......|+.+|...+.+.+.++.+   .+++++++||+.+..+.......     .............         ...
T Consensus       143 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  213 (275)
T PRK08263        143 FPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQ---------WSE  213 (275)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHH---------HHh
Confidence            122356999999999998887765   58999999999887764321100     0011111111100         111


Q ss_pred             eec-ccHHHHHHHHHHHHhCCC-CCcEEe-cCCCCCCHHHHHHHHHHH
Q 019060          242 RSF-CYVSDMVDGLIRLMEGEN-TGPINI-GNPGEFTMLELAENVKEL  286 (346)
Q Consensus       242 ~~~-v~v~Dva~~i~~~~~~~~-~~~~~~-~~~~~~s~~ei~~~i~~~  286 (346)
                      ..+ +.++|++++++.+++.+. .+.|++ .+++.+++.++.+.+.+.
T Consensus       214 ~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        214 RSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             ccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            234 789999999999998765 444444 445678999999888875

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.86  E-value=2.8e-20  Score=162.65  Aligned_cols=219  Identities=12%  Similarity=0.033  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++||||||+|+||++++++|+++| ++|++++|+.... ..+... ...++..+.+|+.+.+..            ++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAG-HRVVGTVRSEAAR-ADFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCc-CEEEEEeCCHHHH-HHHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999999999 9999999854221 111111 123577889999987542            48


Q ss_pred             CEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||........    .+....+++|+.++.++++++.    +.+. ++|++||...+..                
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~----------------  143 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT----------------  143 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC----------------
Confidence            9999999975432222    2345668999999999998853    3333 8999999875531                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc---cHHHH---HHHHHHcCCCeEEecCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG---RVVSN---FIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~  240 (346)
                      ..+...|+.+|...|.+++.++.+   .+++++++||+.+.++.......   .....   ......... ..  .   .
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~---~  217 (277)
T PRK06180        144 MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR-EA--K---S  217 (277)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH-Hh--h---c
Confidence            123467999999999998887765   48999999999998764321110   01111   111110000 00  0   1


Q ss_pred             eeecccHHHHHHHHHHHHhCCCCCcEEecCCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEF  274 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~~~~~  274 (346)
                      ...+..++|+|++++.+++.+.....++.+++..
T Consensus       218 ~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~~~  251 (277)
T PRK06180        218 GKQPGDPAKAAQAILAAVESDEPPLHLLLGSDAL  251 (277)
T ss_pred             cCCCCCHHHHHHHHHHHHcCCCCCeeEeccHHHH
Confidence            1235678999999999998776555555554443

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.86  E-value=8.7e-20  Score=157.79  Aligned_cols=226  Identities=13%  Similarity=0.074  Sum_probs=157.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |++++|||||+|+||++++++|+++| ++|++++|+..... .+...+...++..+.+|+.+.+..            ++
T Consensus         1 ~~k~ilItGat~~iG~~la~~L~~~g-~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          1 TKRTALVTGAAGGIGQALARRFLAAG-DRVLALDIDAAALA-AFADALGDARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999 99999998643221 122222234678899999987543            48


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|.......    .......+..|+.+...+++++.    +.+. ++|++||......                
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  142 (257)
T PRK07074         79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA----------------  142 (257)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC----------------
Confidence            999999986543221    12234556789998888888773    3343 7999999654321                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                       .....|+.+|...+.+++.++.+.   +++++++||+.++++....... ....+.......         ....++++
T Consensus       143 -~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~  211 (257)
T PRK07074        143 -LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA-ANPQVFEELKKW---------YPLQDFAT  211 (257)
T ss_pred             -CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc-cChHHHHHHHhc---------CCCCCCCC
Confidence             011359999999999999887654   6899999999998875321110 011222221111         12247999


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHH
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKE  285 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~  285 (346)
                      ++|++++++.++....    +..+++.++...+.+|+++.+.+
T Consensus       212 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~  254 (257)
T PRK07074        212 PDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTL  254 (257)
T ss_pred             HHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence            9999999999996532    34667888889999999988764

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-20  Score=161.61  Aligned_cols=223  Identities=16%  Similarity=0.131  Sum_probs=149.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      +++++|||||+|+||+++++.|+++| +.|++++|+............   ...++.++.+|+.+.+..           
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKG-YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999 999999886432222111111   124688899999987532           


Q ss_pred             CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||.......    ..+....++.|+.++..+++++    ++.+. ++|++||.....               
T Consensus        81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~---------------  145 (280)
T PRK06914         81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRV---------------  145 (280)
T ss_pred             CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccC---------------
Confidence            48999999986553322    2345567789999988888775    55554 899999975432               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCCCCCCC---------ccHHHHHHHHHHcCCCeEEe
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDD---------GRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~  235 (346)
                       ...+...|+.+|...|.+++.++.   ..+++++++|||.++++......         .......+......  +   
T Consensus       146 -~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---  219 (280)
T PRK06914        146 -GFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I---  219 (280)
T ss_pred             -CCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H---
Confidence             112335699999999999888763   45899999999999887432110         00111111111100  0   


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHH
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTML  277 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~  277 (346)
                        ......+++++|+|++++.+++++. ...|++.++..+++.
T Consensus       220 --~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (280)
T PRK06914        220 --NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL  260 (280)
T ss_pred             --hhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence              0112357889999999999999876 345777766655444

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=162.30  Aligned_cols=224  Identities=15%  Similarity=0.122  Sum_probs=152.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||+++++.|+++| ++|++++|+..... .+.... ...+.++.+|+++....            .+
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEG-ARVVIADIKPARAR-LAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEcCCHHHHH-HHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999999999 99999998643222 122222 23578899999986432            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||......    ..+++...+++|+.++..+++++...      +.++|++||.....                
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  145 (257)
T PRK07067         82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRR----------------  145 (257)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCC----------------
Confidence            99999998654222    23456778899999999999887542      24899999965321                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...+.+.+.++.+   .++++++++|+.++++..... ...+..... ...+......+.......+.
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK07067        146 GEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV-DALFARYEN-RPPGEKKRLVGEAVPLGRMG  223 (257)
T ss_pred             CCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh-hhhhhhccC-CCHHHHHHHHhhcCCCCCcc
Confidence            1123467999999999999888764   579999999999999753211 000000000 00000000011222335788


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +++|+|++++.++....    +.++++.+++.+|
T Consensus       224 ~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        224 VPDDLTGMALFLASADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             CHHHHHHHHHHHhCcccccccCcEEeecCCEeCC
Confidence            99999999999997653    5689998876553

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1e-19  Score=157.22  Aligned_cols=215  Identities=14%  Similarity=0.069  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCccc------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLL------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~------------~   96 (346)
                      |+|+|+||||+|+||+++++.|.++| ++|++++|............+.  ..++.++.+|+++...            .
T Consensus         1 ~~k~vlItG~sg~iG~~la~~L~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          1 MRPVALVTGGRRGIGLGIARALAAAG-FDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999 9999998864322222212111  2357889999998643            2


Q ss_pred             CCCEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHHHc-----C-----C-eEEEEecccccCCCCCCCC
Q 019060           97 EVDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-----A-RILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~-----~-r~i~~SS~~v~~~~~~~~~  159 (346)
                      .+|+|||++|.....      .....+...+++|+.++.++++++...     +     . ++|++||...+.       
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------  152 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIM-------  152 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhcc-------
Confidence            589999999865321      122456677899999999998877442     1     3 699999977542       


Q ss_pred             CCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEec
Q 019060          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
                               +..+...|+.+|.+.|.+++.++.+   .+++++++||+.+.++....    ....+......+ ..+   
T Consensus       153 ---------~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~----~~~~~~~~~~~~-~~~---  215 (256)
T PRK12745        153 ---------VSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP----VTAKYDALIAKG-LVP---  215 (256)
T ss_pred             ---------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc----cchhHHhhhhhc-CCC---
Confidence                     1123356999999999999988764   57999999999998875221    112221111111 111   


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                          ...+.++.|+++++..++....    +..|++.++...
T Consensus       216 ----~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        216 ----MPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             ----cCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence                1257799999999998886542    457888776543

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.85  E-value=8.2e-20  Score=158.03  Aligned_cols=217  Identities=18%  Similarity=0.111  Sum_probs=144.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +++||||||+|+||++++++|+++| ++|++++|+............ ...++..+.+|+.+....            .+
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEG-AKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999999 999999986533222211111 124678899999987532            58


Q ss_pred             CEEEEcccCCCccccc----cChHHHHHHHHHHHHH----HHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFYK----YNPVKTIKTNVIGTLN----MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~----l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+|+........    .+....+..|+.++..    ++.++++.+. +||++||...+..                
T Consensus        83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~----------------  146 (258)
T PRK12429         83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG----------------  146 (258)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC----------------
Confidence            9999999865443222    2344566788888444    4455555555 8999999865421                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe-----EEecCCcce
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL-----TVQAPGTQT  241 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  241 (346)
                      ..+...|+.+|...+.+.+.++.+   .+++++++||+.+++|....    .+......  .+...     ..+......
T Consensus       147 ~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~  220 (258)
T PRK12429        147 SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRK----QIPDLAKE--RGISEEEVLEDVLLPLVPQ  220 (258)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhh----hhhhhccc--cCCChHHHHHHHHhccCCc
Confidence            223467999999999988877655   36889999999999875321    11111000  00000     000111223


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..+++++|+|++++.++....    ++.|++.++
T Consensus       221 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        221 KRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             cccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            579999999999999887543    345777665

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=8.4e-20  Score=168.74  Aligned_cols=225  Identities=12%  Similarity=0.078  Sum_probs=151.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----------CCCCeeEEecccCCccc-----
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----------GHPRFELIRHDVTEPLL-----   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~~d~~~~~~-----   95 (346)
                      .+++||||||+|+||++++++|++.| ++|+++.|+............          ...++.++.+|+.+.+.     
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G-~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46789999999999999999999999 999999986432211111100          01357899999998653     


Q ss_pred             CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           96 IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      .++|+|||++|....  ...+....+.+|+.++.+++++|++.++ |||++||.+++...    ....      ......
T Consensus       158 ggiDiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g----~p~~------~~~sk~  225 (576)
T PLN03209        158 GNASVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG----FPAA------ILNLFW  225 (576)
T ss_pred             cCCCEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC----cccc------chhhHH
Confidence            379999999986431  1224556678999999999999999887 99999998763110    0111      111234


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      .|...|..+|..+.    .+++++++||||.++++.......            + .+.....+......+...|||+++
T Consensus       226 ~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t------------~-~v~~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        226 GVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET------------H-NLTLSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             HHHHHHHHHHHHHH----HcCCCEEEEECCeecCCccccccc------------c-ceeeccccccCCCccCHHHHHHHH
Confidence            57778888888774    358999999999999874221000            1 111111111112357889999999


Q ss_pred             HHHHhCCC---CCcEEecCCCCCCHHHHHHHHHH
Q 019060          255 IRLMEGEN---TGPINIGNPGEFTMLELAENVKE  285 (346)
Q Consensus       255 ~~~~~~~~---~~~~~~~~~~~~s~~ei~~~i~~  285 (346)
                      +.++.++.   ..++.+.++.......+.+.+..
T Consensus       289 vfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~  322 (576)
T PLN03209        289 ACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAK  322 (576)
T ss_pred             HHHHcCchhccceEEEEEeCCCCCCCCHHHHHHh
Confidence            99998654   56788887654444445555443

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.85  E-value=1.8e-19  Score=154.60  Aligned_cols=213  Identities=14%  Similarity=0.095  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++|+||||||+|+||++++++|+++| ++|+++.|+............ ....+.++.+|+.+....            .
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADG-AKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45799999999999999999999999 899999986432211111111 123577889999986432            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||++|......    ........+..|+.+..++++++.    +.++ ++|++||.....                
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~----------------  146 (246)
T PRK05653         83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVT----------------  146 (246)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----------------
Confidence            799999998754322    123345678899999999888774    4454 899999975432                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...|.+.+.+++.   .+++++++||+.++++....     +........... +       ....++
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~-----~~~~~~~~~~~~-~-------~~~~~~  213 (246)
T PRK05653        147 GNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG-----LPEEVKAEILKE-I-------PLGRLG  213 (246)
T ss_pred             CCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh-----hhHHHHHHHHhc-C-------CCCCCc
Confidence            1122356999999999998887664   37899999999999986321     111111111111 1       114578


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++|+++++..++....    +..+++.+|..
T Consensus       214 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        214 QPEEVANAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            99999999999986532    45788877653

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.85  E-value=1.5e-19  Score=162.31  Aligned_cols=253  Identities=19%  Similarity=0.162  Sum_probs=174.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCCc--chhhhhc--------------CCCCeeEEecccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSK--DNLRKWI--------------GHPRFELIRHDVTE   92 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~--~~~~~~~--------------~~~~~~~~~~d~~~   92 (346)
                      .+++|+|||||||+|.-++++|++.-+  .+++++.|.+....  +.+..+.              ...++..+.+|+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            378999999999999999999999863  57888888754322  1222211              12467789999988


Q ss_pred             cccC-----------CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCC---CC
Q 019060           93 PLLI-----------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDP---LV  156 (346)
Q Consensus        93 ~~~~-----------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~---~~  156 (346)
                      +.+.           ++|+|||+|+...   ..+.......+|+.|+.++++.|++...  -++++||+++.-..   .+
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvr---Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E  167 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVR---FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE  167 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeec---cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence            7432           6999999998653   3455566778999999999999999875  59999999875211   11


Q ss_pred             CCCCCCC------------c---------CCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC
Q 019060          157 HPQDESY------------W---------GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD  215 (346)
Q Consensus       157 ~~~~e~~------------~---------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~  215 (346)
                      .++.+..            +         .+.-...+.+.|.-+|..+|.++...+  .+++++|+||+.|......+-.
T Consensus       168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP~p  245 (467)
T KOG1221|consen  168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEPFP  245 (467)
T ss_pred             cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCCCC
Confidence            1111111            0         000011234679999999999998765  4799999999999887644331


Q ss_pred             cc-----HHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC-----CC--CCcEEecCC--CCCCHHHHHH
Q 019060          216 GR-----VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG-----EN--TGPINIGNP--GEFTMLELAE  281 (346)
Q Consensus       216 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~-----~~--~~~~~~~~~--~~~s~~ei~~  281 (346)
                      +.     -...++-...+|..-.+..+.+...++|++|.|+++++.+.-.     +.  ..+||++++  .++++.++.+
T Consensus       246 GWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e  325 (467)
T KOG1221|consen  246 GWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIE  325 (467)
T ss_pred             CccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHH
Confidence            11     0111222223344445556677888999999999999876622     11  338999876  4799999999


Q ss_pred             HHHHHcC
Q 019060          282 NVKELIN  288 (346)
Q Consensus       282 ~i~~~~g  288 (346)
                      ...+.+-
T Consensus       326 ~~~~~~~  332 (467)
T KOG1221|consen  326 LALRYFE  332 (467)
T ss_pred             HHHHhcc
Confidence            9998874

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.4e-19  Score=156.49  Aligned_cols=215  Identities=13%  Similarity=0.076  Sum_probs=144.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++||||+|+||++++++|+++| ++|+++.|+............. ...+.++.+|+++.+..            +
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAG-FPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999 8999888853221111111111 13577889999986533            5


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||.......    ..+....+..|+.++.++++++.    +.+. +||++||...+..               
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~---------------  152 (274)
T PRK07775         88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQ---------------  152 (274)
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCC---------------
Confidence            8999999987543221    23455667899999999988764    2233 7999999877642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ..+...|+.+|.+.|.+++.++.+.   +++++++|||.+.++.........+..++.......       ......++
T Consensus       153 -~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  224 (274)
T PRK07775        153 -RPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWG-------QARHDYFL  224 (274)
T ss_pred             -CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhc-------cccccccc
Confidence             1223569999999999999887664   799999999887554211001111122222111100       11224689


Q ss_pred             cHHHHHHHHHHHHhCCC-CCcEEec
Q 019060          246 YVSDMVDGLIRLMEGEN-TGPINIG  269 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~-~~~~~~~  269 (346)
                      +++|+|++++.+++++. ..+||+.
T Consensus       225 ~~~dva~a~~~~~~~~~~~~~~~~~  249 (274)
T PRK07775        225 RASDLARAITFVAETPRGAHVVNME  249 (274)
T ss_pred             CHHHHHHHHHHHhcCCCCCCeeEEe
Confidence            99999999999998765 3356664

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.84  E-value=1.5e-19  Score=155.63  Aligned_cols=212  Identities=19%  Similarity=0.184  Sum_probs=150.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C-CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++++||||+|+||++++++|++.| ++|++++|...... .+...+ . ...+..+.+|+++....            
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g-~~vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREG-ASVVVADINAEGAE-RVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 99999998642221 121111 1 12567889999987532            


Q ss_pred             CCCEEEEcccCCCcc-------ccccChHHHHHHHHHHHHHHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 EVDQIYHLACPASPI-------FYKYNPVKTIKTNVIGTLNMLGLAKRV-----GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      .+|+|||+||.....       .....+...+..|+.++.++++++...     +.++|++||...+.            
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------  150 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL------------  150 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC------------
Confidence            589999999964311       122345667889999999998887653     23899999987763            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                             +...|+.+|.+.|.+++.++++.   ++.+++++||.+..+.....   ....+......+.+..        
T Consensus       151 -------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~~~~~~~~~--------  212 (250)
T PRK07774        151 -------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV---TPKEFVADMVKGIPLS--------  212 (250)
T ss_pred             -------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc---CCHHHHHHHHhcCCCC--------
Confidence                   12469999999999999988764   68899999998887653211   1122333333333222        


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                       -+.+++|+|++++.++....    ++.|++.+++.++
T Consensus       213 -~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        213 -RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             -CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCCeecc
Confidence             14568999999999887642    4579998876543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.84  E-value=2.6e-19  Score=155.09  Aligned_cols=212  Identities=15%  Similarity=0.111  Sum_probs=143.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C-CCCeeEEecccCCccc------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLL------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~------------~   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+..  .......+ . ...+.++.+|+.+.+.            .
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G-~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEG-ARVVLVDRSEL--VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCchH--HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999 99999988531  11111111 1 2356788999998632            2


Q ss_pred             CCCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHH----HHHHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLG----LAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~----~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||.... .    ....+....++.|+.+...+++    .+++.+. ++|++||...++.             
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------------  150 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence            58999999985321 1    1233456677888887765554    4445554 8999999876531             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCC---------CCCccHHHHHHHHHHcCCCeEE
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMN---------IDDGRVVSNFIAQAIRGEPLTV  234 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~  234 (346)
                           +...|+.+|.+.+.+.+.++.+.   ++++++++||.+++|...         .........++.......++. 
T Consensus       151 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  224 (260)
T PRK12823        151 -----NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK-  224 (260)
T ss_pred             -----CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc-
Confidence                 11359999999999999987765   899999999999997311         000112233333333332222 


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                              .+.+++|+|++++.++....    +..+++.+++
T Consensus       225 --------~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        225 --------RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             --------cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence                    24578999999999886542    4467776654

>PRK06194 hypothetical protein; Provisional

Probab=99.84  E-value=1.7e-20  Score=165.00  Aligned_cols=215  Identities=13%  Similarity=0.066  Sum_probs=148.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +++||||||+|+||++++++|+++| ++|++++|+............. ..++.++.+|+++.+..            ++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALG-MKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999 9999999854322222222211 23577799999986432            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcC-------CeEEEEecccccCCCCCCCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG-------ARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~-------~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                      |+|||+||......    ...++...+++|+.++.+++++    +.+.+       .++|++||...+..          
T Consensus        85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------  154 (287)
T PRK06194         85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLA----------  154 (287)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC----------
Confidence            99999999765432    2244566788999999987766    33332       37999999876632          


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHhC-----CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG-----IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                            ..+...|+.+|.+.|.+++.++.+.+     +++.++.|+.+..+.             .....+++..+.+++
T Consensus       155 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~-------------~~~~~~~~~~~~~~~  215 (287)
T PRK06194        155 ------PPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI-------------WQSERNRPADLANTA  215 (287)
T ss_pred             ------CCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc-------------ccccccCchhcccCc
Confidence                  12235699999999999998877654     445556665544321             112233445555666


Q ss_pred             cceeecccHHHHHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPN  290 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~  290 (346)
                      ...+++++++|++..+....              .++..|+++.+.+.+...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~--------------~~s~~dva~~i~~~~~~~  253 (287)
T PRK06194        216 PPTRSQLIAQAMSQKAVGSG--------------KVTAEEVAQLVFDAIRAG  253 (287)
T ss_pred             cccchhhHHHHHHHhhhhcc--------------CCCHHHHHHHHHHHHHcC
Confidence            67788999998887754321              178999999998877543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=1.2e-19  Score=156.37  Aligned_cols=216  Identities=13%  Similarity=-0.037  Sum_probs=146.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C-CCCeeEEecccCCccc------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLL------------IE   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~------------~~   97 (346)
                      +++||||||+|+||++++++|+++| +.|++..|............. . ...+.++.+|+++...            .+
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEG-SLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV   84 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999 888877664322111111111 1 1246678899988643            25


Q ss_pred             CCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|+|||+||........    ......+.+|+.+...+++++.+.   ..+||++||...+.                +.
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~  148 (252)
T PRK06077         85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIR----------------PA  148 (252)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccC----------------CC
Confidence            89999999964432221    223566789999988888877643   23899999987763                33


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      .+...|+.+|...|.+++.++++.  ++.+.+++|+.+.++..... ............ . .+      .....+++++
T Consensus       149 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~-~~~~~~~~~~~~-~-~~------~~~~~~~~~~  219 (252)
T PRK06077        149 YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESL-FKVLGMSEKEFA-E-KF------TLMGKILDPE  219 (252)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhh-hhcccccHHHHH-H-hc------CcCCCCCCHH
Confidence            445679999999999999988775  57889999999887631100 000000000111 0 01      1123689999


Q ss_pred             HHHHHHHHHHhCCC--CCcEEecCCCC
Q 019060          249 DMVDGLIRLMEGEN--TGPINIGNPGE  273 (346)
Q Consensus       249 Dva~~i~~~~~~~~--~~~~~~~~~~~  273 (346)
                      |+|++++.++..+.  ++.|++.++..
T Consensus       220 dva~~~~~~~~~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        220 EVAEFVAAILKIESITGQVFVLDSGES  246 (252)
T ss_pred             HHHHHHHHHhCccccCCCeEEecCCee
Confidence            99999999997554  56888888754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=3.8e-19  Score=153.21  Aligned_cols=216  Identities=15%  Similarity=0.087  Sum_probs=146.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+...............++.++.+|+.+....            ++
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEG-ARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999 999999996533222112211123578899999987543            58


Q ss_pred             CEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||++|......     ..+++...+..|+.++..+++.+..    .+. +||++||...+.                
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  146 (251)
T PRK07231         83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLR----------------  146 (251)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcC----------------
Confidence            99999998643221     2344567888999887777776553    443 899999987764                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...+.+++.++.+.   ++++++++|+.+.++.....................         ....++
T Consensus       147 ~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  217 (251)
T PRK07231        147 PRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATI---------PLGRLG  217 (251)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCC---------CCCCCc
Confidence            22334579999999999988887653   789999999998765421100000001111111111         123578


Q ss_pred             cHHHHHHHHHHHHhCCC---CCc-EEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TGP-INIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~~-~~~~~~~  272 (346)
                      +++|+|++++.++....   .|. +.+.++.
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        218 TPEDIANAALFLASDEASWITGVTLVVDGGR  248 (251)
T ss_pred             CHHHHHHHHHHHhCccccCCCCCeEEECCCc
Confidence            99999999999997543   344 5565543

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.84  E-value=3.9e-19  Score=153.51  Aligned_cols=217  Identities=17%  Similarity=0.099  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++||||||+|+||++++++|++.| ++|++++|+............. ..++.++.+|+.+.+..            .
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAG-AEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999 9999999864322211111111 12477889999986432            4


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||++|...+...    .++....+.+|+.++.++++++.+.    +. ++|++||.....                
T Consensus        88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------------  151 (255)
T PRK07523         88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSAL----------------  151 (255)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhcc----------------
Confidence            8999999997643322    2334667789999999999887643    33 899999975431                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...|.+++.++.+   .+++++++||+.+.++........  ..+........+         ...+.
T Consensus       152 ~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~  220 (255)
T PRK07523        152 ARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLEKRTP---------AGRWG  220 (255)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHHhcCC---------CCCCc
Confidence            2223467999999999999988763   589999999999998752210000  111111111111         12467


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .++|+|++++.++....    +..+++.++..+|
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        221 KVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             CHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            89999999999987543    3467887776544

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.83  E-value=5.9e-20  Score=157.99  Aligned_cols=218  Identities=16%  Similarity=0.126  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      +++++|||||+|+||++++++|++.| ++|+++.|+.....+.+...+.  ..++.++.+|+++.+..            
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAG-AHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999999 9999988864322222221111  23577899999987532            


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      ++|+|||+|+...  ....++...+++|+.++.++++++.+.   +.++|++||........    .+.     .+  ..
T Consensus        84 ~~d~vi~~ag~~~--~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~-----~~--~~  150 (248)
T PRK07806         84 GLDALVLNASGGM--ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKT-----MP--EY  150 (248)
T ss_pred             CCcEEEECCCCCC--CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccC-----Cc--cc
Confidence            5899999997543  223345667789999999999998754   23899999964321100    011     11  13


Q ss_pred             CchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      ..|+.+|.+.|.+++.++.+   .++++++++|+.+-++..        ..+......+ .+.  ........+++++|+
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~--------~~~~~~~~~~-~~~--~~~~~~~~~~~~~dv  219 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVT--------ATLLNRLNPG-AIE--ARREAAGKLYTVSEF  219 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchh--------hhhhccCCHH-HHH--HHHhhhcccCCHHHH
Confidence            57999999999999988765   367888888877665521        1111000000 000  000012368999999


Q ss_pred             HHHHHHHHhCCC--CCcEEecCCCC
Q 019060          251 VDGLIRLMEGEN--TGPINIGNPGE  273 (346)
Q Consensus       251 a~~i~~~~~~~~--~~~~~~~~~~~  273 (346)
                      |++++.+++...  +.+|++.+++.
T Consensus       220 a~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        220 AAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             HHHHHHHhhccccCccEEEecCccc
Confidence            999999998664  55788888764

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.4e-19  Score=156.10  Aligned_cols=215  Identities=17%  Similarity=0.132  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++++||||+|+||++++++|+++| ++|+++.|+................+.++.+|+++....            ++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREG-ARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCC-CeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            36799999999999999999999999 999999986432222222221123578899999987432            68


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+++......    ..++....+..|+.++..+.+++    ++.+. ++|++||......                
T Consensus        83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~----------------  146 (252)
T PRK06138         83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAG----------------  146 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccC----------------
Confidence            99999999754322    22345566889999887766654    44454 8999999865421                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc-cHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ......|+.+|.+.+.+++.++.+.   +++++++||+.++++....... ...+..+.......        .....++
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  218 (252)
T PRK06138        147 GRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRAR--------HPMNRFG  218 (252)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhc--------CCCCCCc
Confidence            1223569999999999999887664   7999999999999875211000 00011111111110        0112378


Q ss_pred             cHHHHHHHHHHHHhCCC---CCc-EEecC
Q 019060          246 YVSDMVDGLIRLMEGEN---TGP-INIGN  270 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~~-~~~~~  270 (346)
                      +++|+|++++.++.++.   .|. +.+.+
T Consensus       219 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        219 TAEEVAQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence            89999999999987754   344 44444

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.83  E-value=2.5e-20  Score=158.72  Aligned_cols=218  Identities=19%  Similarity=0.221  Sum_probs=148.4

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccCCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACPAS  109 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~~~  109 (346)
                      |+|+||||.+|+++++.|++.+ ++|+++.|+.+   ......+...+++.+.+|+.+.+.     .++|+||++.+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~-~~V~~l~R~~~---~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAG-FSVRALVRDPS---SDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTT-GCEEEEESSSH---HHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCC-CCcEEEEeccc---hhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence            7999999999999999999988 99999999652   222222223578899999998754     48999998876442


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                                  ........+++++|++.|+ +||+.|....+.        +.     ....|.......|...|+.++
T Consensus        77 ------------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~-----~~~~p~~~~~~~k~~ie~~l~  131 (233)
T PF05368_consen   77 ------------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ES-----SGSEPEIPHFDQKAEIEEYLR  131 (233)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TT-----TTSTTHHHHHHHHHHHHHHHH
T ss_pred             ------------hhhhhhhhhHHHhhhccccceEEEEEeccccc--------cc-----ccccccchhhhhhhhhhhhhh
Confidence                        1134567889999999999 666544333321        00     122233345567888888775


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHH-HHcC--CCeEEecCCcceeecc-cHHHHHHHHHHHHhCCC-C
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ-AIRG--EPLTVQAPGTQTRSFC-YVSDMVDGLIRLMEGEN-T  263 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~v-~v~Dva~~i~~~~~~~~-~  263 (346)
                      +    .+++++++|++..+...        +..+... ....  ..+.+.++++....++ +.+|++++++.++..+. .
T Consensus       132 ~----~~i~~t~i~~g~f~e~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~  199 (233)
T PF05368_consen  132 E----SGIPYTIIRPGFFMENL--------LPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH  199 (233)
T ss_dssp             H----CTSEBEEEEE-EEHHHH--------HTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT
T ss_pred             h----ccccceeccccchhhhh--------hhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh
Confidence            4    48999999998765321        1111110 0112  2356667777666775 99999999999998865 3


Q ss_pred             ---CcEEecCCCCCCHHHHHHHHHHHcCCCcceE
Q 019060          264 ---GPINIGNPGEFTMLELAENVKELINPNVEIT  294 (346)
Q Consensus       264 ---~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~  294 (346)
                         ..+.+++ +.+|+.|+++.+.+.+|++.++.
T Consensus       200 ~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y~  232 (233)
T PF05368_consen  200 NNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKYV  232 (233)
T ss_dssp             TEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEEE
T ss_pred             cCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEEe
Confidence               3455554 88999999999999999986653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.7e-19  Score=153.52  Aligned_cols=232  Identities=13%  Similarity=0.040  Sum_probs=151.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++|||||+|+||++++++|.++| +.|++++|+.+...+....+.. ..++.++.+|+++....            +
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRG-ARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            36789999999999999999999999 8999988864322222212111 12477889999986433            4


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||.......    .++....+++|+.++.++++++.    +.+  .++|++||...+.               
T Consensus        84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~---------------  148 (275)
T PRK05876         84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLV---------------  148 (275)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhcc---------------
Confidence            8999999997543222    23456678999999999888764    333  3899999987653               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+   .++++++++|+.+.++....    ..................+......++
T Consensus       149 -~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK05876        149 -PNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN----SERIRGAACAQSSTTGSPGPLPLQDDN  223 (275)
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc----hhhhcCccccccccccccccccccccC
Confidence             2233467999999866666665544   37999999999988764211    000000000001111111222334578


Q ss_pred             ccHHHHHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHc
Q 019060          245 CYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELI  287 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~  287 (346)
                      ++++|+|+.++.++.++.  .+.+.  .+....++...+.+..
T Consensus       224 ~~~~dva~~~~~ai~~~~--~~~~~--~~~~~~~~~~~~~~~~  262 (275)
T PRK05876        224 LGVDDIAQLTADAILANR--LYVLP--HAASRASIRRRFERID  262 (275)
T ss_pred             CCHHHHHHHHHHHHHcCC--eEEec--ChhhHHHHHHHHHHHH
Confidence            999999999999998543  34443  3345566666655544

>PRK06128 oxidoreductase; Provisional

Probab=99.83  E-value=1.7e-18  Score=152.98  Aligned_cols=215  Identities=14%  Similarity=0.088  Sum_probs=150.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|++|||||+|+||++++++|++.| ++|+++.+..... .......+.  ..++.++.+|+.+.+..            
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G-~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREG-ADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999 8988876643211 111222221  23567889999986432            


Q ss_pred             CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+||.....     ...+++...+++|+.++..+++++...   +.++|++||...|..               
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~---------------  198 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQP---------------  198 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCC---------------
Confidence            589999999964321     133567889999999999999988653   348999999887642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ......|+.+|.+.+.+++.++.+   .++++++++||.+.++.....  ......+..+....+         ...+.
T Consensus       199 -~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~--~~~~~~~~~~~~~~p---------~~r~~  266 (300)
T PRK06128        199 -SPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG--GQPPEKIPDFGSETP---------MKRPG  266 (300)
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC--CCCHHHHHHHhcCCC---------CCCCc
Confidence             122346999999999999988776   479999999999999853211  011122222211111         12466


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..+|+|.+++.++....    +..+++.++..+
T Consensus       267 ~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        267 QPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            88999999999887543    457888877654

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.83  E-value=7.8e-19  Score=151.02  Aligned_cols=209  Identities=16%  Similarity=0.112  Sum_probs=145.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cC--CCCeeEEecccCCccc----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IG--HPRFELIRHDVTEPLL----------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~d~~~~~~----------   95 (346)
                      ++|+|+||||+|+||+++++.|+++| ++|+++.|......+.....   ..  ...+.++.+|+.+...          
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADG-ADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999 99998876433222222211   11  2357889999998743          


Q ss_pred             --CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH-----HcCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                        .++|+|||++|......    ...++...++.|..++..+++++.     +.+. ++|++||...+..          
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------  153 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRG----------  153 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCC----------
Confidence              25899999999765221    223456778999999999999887     3444 8999999876532          


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                            ..+...|+.+|...+.+++.++.+   .+++++++||+.++++....   ....   .......+.        
T Consensus       154 ------~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~---~~~~---~~~~~~~~~--------  213 (249)
T PRK12827        154 ------NRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN---AAPT---EHLLNPVPV--------  213 (249)
T ss_pred             ------CCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc---cchH---HHHHhhCCC--------
Confidence                  122356999999999998887765   37999999999999985321   1111   111111111        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                       ..+.+++|+|++++.++....    ++.+++.++
T Consensus       214 -~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        214 -QRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             -cCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence             124578999999998886532    335666553

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.7e-19  Score=153.97  Aligned_cols=214  Identities=14%  Similarity=0.111  Sum_probs=146.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| +.|++++|+.... +.....+.  ..++.++.+|+++.+..            
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAG-ADVVLAARTAERL-DEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcC-CEEEEEeCCHHHH-HHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999999864321 22222211  23578899999986432            


Q ss_pred             CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||...+.     ....++...++.|+.++..+++++...    +.++|++||...+.               
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~---------------  146 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRH---------------  146 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhcc---------------
Confidence            589999999864321     123456778899999999999988642    23899999986542               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc-------cHHHHHHHHHHcCCCeEEecC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG-------RVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  237 (346)
                       +..+...|+.+|...+.+++.++.+   .++++++++||.++++.......       .-...........  +     
T Consensus       147 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----  218 (258)
T PRK07890        147 -SQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN--S-----  218 (258)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc--C-----
Confidence             2223457999999999999988765   37999999999999985211000       0001111111111  1     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                        ....+.+++|+|++++.++....    ++.+.+.++
T Consensus       219 --~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        219 --DLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             --CccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence              11246789999999999887432    334555544

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.83  E-value=6.8e-19  Score=152.80  Aligned_cols=220  Identities=21%  Similarity=0.181  Sum_probs=145.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++|||||+|+||++++++|+++| +.|+++.|+.... ..+.......++.++.+|+.++...            +
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAG-ARVHVCDVSEAAL-AATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            346899999999999999999999999 9999999864322 1222222222568899999986532            5


Q ss_pred             CCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHH----HcCC--eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA--RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      +|+|||++|.....     ...++....++.|+.++..+++++.    ..+.  +++++||.....              
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~--------------  152 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL--------------  152 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc--------------
Confidence            89999999865221     1234567788999999999888763    3333  577777754321              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe----cCCc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ----APGT  239 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  239 (346)
                        .......|+.+|...|.+++.++...   +++++++||+.++++...    ..+.......  +......    ....
T Consensus       153 --~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~  224 (264)
T PRK12829        153 --GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR----RVIEARAQQL--GIGLDEMEQEYLEKI  224 (264)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH----HHhhhhhhcc--CCChhHHHHHHHhcC
Confidence              11122469999999999998887653   799999999999998521    1111100000  0000000    0000


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ....+++++|+|+++..++....    +..|++.++..
T Consensus       225 ~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        225 SLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCcc
Confidence            11258999999999998886432    44688877653

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.82  E-value=2.9e-19  Score=154.74  Aligned_cols=222  Identities=18%  Similarity=0.123  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCccc------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL------------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~------------   95 (346)
                      |+++||||||+|+||++++++|++.| +.|++++|+...........   .....+.++.+|+++.+.            
T Consensus         1 m~k~ilItG~~~~IG~~la~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   79 (259)
T PRK12384          1 MNQVAVVIGGGQTLGAFLCHGLAEEG-YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF   79 (259)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999 99999998643222111111   112357889999998643            


Q ss_pred             CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccc-cCCCCCCCCCCCCc
Q 019060           96 IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEV-YGDPLVHPQDESYW  164 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v-~~~~~~~~~~e~~~  164 (346)
                      ..+|+|||+||......    ...+....++.|+.++..+++++.+    .+  .++|++||... ++.           
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-----------  148 (259)
T PRK12384         80 GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS-----------  148 (259)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----------
Confidence            25899999998654322    2234566778999998777665543    44  38999998652 321           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHc--CCCeEEecCCc
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPGT  239 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  239 (346)
                            .....|+.+|.+.+.+++.++.+   .++++.++|||.++++...   ...++.+......  ........+..
T Consensus       149 ------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (259)
T PRK12384        149 ------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMF---QSLLPQYAKKLGIKPDEVEQYYIDKV  219 (259)
T ss_pred             ------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhh---hhhhHHHHHhcCCChHHHHHHHHHhC
Confidence                  12256999999999988887753   5899999999998876421   1222222211000  00000011122


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ....+++++|++++++.++.+..    +..|++.+++.
T Consensus       220 ~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~  257 (259)
T PRK12384        220 PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQV  257 (259)
T ss_pred             cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCCEE
Confidence            23468899999999998887543    45688887654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.82  E-value=1.2e-18  Score=149.75  Aligned_cols=211  Identities=15%  Similarity=0.080  Sum_probs=146.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C-CCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++||||+|+||++++++|+++| +.|+++.+..+...+.....+ . ..++.++.+|+.+....            .
T Consensus         6 ~~~~lItG~s~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          6 GKVAIVTGGAKGIGKAITVALAQEG-AKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999 888876553322222221111 1 13578899999987532            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ....+...++.|+.++..+++++..    .+ .++|++||...+..               
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------  149 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAG---------------  149 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCC---------------
Confidence            899999999754322    2245677889999999999888764    22 38999999765421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ..+...|+.+|.+.+.+++.++.+.   ++++++++|+.+.++...    ............+.         ....+.
T Consensus       150 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~----~~~~~~~~~~~~~~---------~~~~~~  215 (247)
T PRK12935        150 -GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA----EVPEEVRQKIVAKI---------PKKRFG  215 (247)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh----hccHHHHHHHHHhC---------CCCCCc
Confidence             1223569999999999988877654   899999999998875321    11111122211111         123578


Q ss_pred             cHHHHHHHHHHHHhCCC---CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~~~~~~~~~  272 (346)
                      +++|++++++.+++...   ++.|++.++.
T Consensus       216 ~~edva~~~~~~~~~~~~~~g~~~~i~~g~  245 (247)
T PRK12935        216 QADEIAKGVVYLCRDGAYITGQQLNINGGL  245 (247)
T ss_pred             CHHHHHHHHHHHcCcccCccCCEEEeCCCc
Confidence            99999999999887542   5678888753

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.6e-19  Score=152.48  Aligned_cols=212  Identities=15%  Similarity=0.085  Sum_probs=144.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC-CCCeeEEecccCCccc--------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL--------------   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~--------------   95 (346)
                      +++|+||||+|+||++++++|+++| ++|.++ .|+............. ...+.++.+|+.+.+.              
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G-~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDG-ALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            5799999999999999999999999 888775 5543211111111111 2357789999998643              


Q ss_pred             ----CCCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEecccccCCCCCCCCCCCCc
Q 019060           96 ----IEVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV--G-ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 ----~~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~--~-~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                          .++|+|||+||........    ......+++|+.++.++++++...  . .++|++||..++.            
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~------------  152 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRL------------  152 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcC------------
Confidence                2589999999975543222    233566789999999999988753  2 3899999987763            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|.+.|.+.+.++.+   .++++++++|+.++++.......   ...+........        ..
T Consensus       153 ----~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~~~~--------~~  217 (254)
T PRK12746        153 ----GFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD---DPEIRNFATNSS--------VF  217 (254)
T ss_pred             ----CCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc---ChhHHHHHHhcC--------Cc
Confidence                2223356999999999998887764   47999999999998874211000   011111111111        11


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..+++++|+|+++..++..+.    ++.|++.++
T Consensus       218 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        218 GRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            256789999999998887542    457888765

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.82  E-value=1.1e-18  Score=150.08  Aligned_cols=212  Identities=16%  Similarity=0.156  Sum_probs=142.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      |++++|||||+|+||.+++++|+++| +.|++..+..+.........+.  ...+.++.+|+.+....            
T Consensus         1 ~~~~~lVtG~~~~iG~~~a~~l~~~G-~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          1 MRKVMIITGASRGIGAATALLAAERG-YAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            35689999999999999999999999 8887765432222222211111  23567899999986432            


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEecccc-cCCCCCCCCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEV-YGDPLVHPQDES  162 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~i~~SS~~v-~~~~~~~~~~e~  162 (346)
                      .+|+|||+||......     ..++....+++|+.++..+++++.+.        +.++|++||... ++.         
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------  150 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGS---------  150 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCC---------
Confidence            5899999998754221     22345678899999999888776542        126999999764 331         


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            + .....|+.+|...|.+++.++.+.   +++++++||+.++++......   .+..+.......++.      
T Consensus       151 ------~-~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~---~~~~~~~~~~~~p~~------  214 (248)
T PRK06123        151 ------P-GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG---EPGRVDRVKAGIPMG------  214 (248)
T ss_pred             ------C-CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC---CHHHHHHHHhcCCCC------
Confidence                  1 111359999999999999887764   799999999999998532111   122222222222221      


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                         -+.+++|++++++.++....    +..|++.++
T Consensus       215 ---~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        215 ---RGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             ---CCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence               12478999999999887542    446777654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.82  E-value=7.7e-19  Score=150.11  Aligned_cols=204  Identities=15%  Similarity=0.099  Sum_probs=144.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.....+.... +......++.+|+.+....            ++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARG-ARVALIGRGAAPLSQTLPG-VPADALRIGGIDLVDPQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCC-CeEEEEeCChHhHHHHHHH-HhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence            36899999999999999999999999 9999999965332222222 2234577888999885422            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+++......    ..++..+.+..|..++..+++++.    +.+. ++|++||...++.                
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  147 (239)
T PRK12828         84 DALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKA----------------  147 (239)
T ss_pred             CEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccC----------------
Confidence            99999998643221    223345667899999999888764    3344 8999999887642                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+++.++..   .++++.++||+.++++.....                 ..    ......+++
T Consensus       148 ~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~-----------------~~----~~~~~~~~~  206 (239)
T PRK12828        148 GPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD-----------------MP----DADFSRWVT  206 (239)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc-----------------CC----chhhhcCCC
Confidence            123356999999999988877654   479999999999998731100                 00    001123789


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++|+|++++.++.+..    +..+.+.+++.
T Consensus       207 ~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~  237 (239)
T PRK12828        207 PEQIAAVIAFLLSDEAQAITGASIPVDGGVA  237 (239)
T ss_pred             HHHHHHHHHHHhCcccccccceEEEecCCEe
Confidence            9999999999997643    34566666553

>PLN02253 xanthoxin dehydrogenase

Probab=99.82  E-value=1.2e-18  Score=152.51  Aligned_cols=220  Identities=20%  Similarity=0.137  Sum_probs=146.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|................++.++.+|+.+.+..            ++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHG-AKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 999999885422211111111123678899999987443            59


Q ss_pred             CEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccc-cCCCCCCCCCCCCcCC
Q 019060           99 DQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEV-YGDPLVHPQDESYWGN  166 (346)
Q Consensus        99 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v-~~~~~~~~~~e~~~~~  166 (346)
                      |+|||+||.....      ...+++...+++|+.++.++++++..    .+ .++|++||... ++.             
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------  162 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-------------  162 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-------------
Confidence            9999999865321      12345678899999999998887653    22 37889888654 321             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC---Cc---cHHHHHHHHHHcCCCeEEecC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DG---RVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~  237 (346)
                          .....|+.+|.+.|.+.+.++.+.   ++++.+++|+.+..+.....   ..   ..+..+......+..+     
T Consensus       163 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----  233 (280)
T PLN02253        163 ----LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL-----  233 (280)
T ss_pred             ----CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-----
Confidence                112469999999999999887764   68999999999987632110   00   0111111100001110     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                         ....++++|+|++++.++....    +..+++.++...+.
T Consensus       234 ---~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~  273 (280)
T PLN02253        234 ---KGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCTN  273 (280)
T ss_pred             ---cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence               1234789999999999887543    44677776654433

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.82  E-value=2.4e-18  Score=148.13  Aligned_cols=214  Identities=15%  Similarity=0.069  Sum_probs=142.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++||||+|+||++++++|+++| ++|+++ .|+.....+...... ...++.++.+|+++++..            .
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEG-YDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999 887764 554322111111111 123578899999987532            4


Q ss_pred             CCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||........    ......+++|+.++..+++++..    .+. +||++||...+.                
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------  146 (250)
T PRK08063         83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIR----------------  146 (250)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcc----------------
Confidence            89999999865432222    23344677999999888887754    333 899999976542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|.+.|.+++.++.+   .++++++++|+.+..+........  ..+........         ....++
T Consensus       147 ~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~~~---------~~~~~~  215 (250)
T PRK08063        147 YLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR--EELLEDARAKT---------PAGRMV  215 (250)
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc--hHHHHHHhcCC---------CCCCCc
Confidence            2233457999999999999887755   478999999999987642211000  11111111111         012478


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +.+|+|++++.++..+.    +..+++.++..
T Consensus       216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        216 EPEDVANAVLFLCSPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECCCee
Confidence            99999999999887643    44667766543

>PRK06182 short chain dehydrogenase; Validated

Probab=99.81  E-value=9.5e-19  Score=152.67  Aligned_cols=212  Identities=14%  Similarity=0.083  Sum_probs=140.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      +++|+||||+|+||++++++|++.| ++|++++|+..    .+.... ..++.++.+|+++.+..            ++|
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~----~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQG-YTVYGAARRVD----KMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999 99999998532    222222 23588899999987432            689


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHH----HHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLN----MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~----l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||......    ..+++...+++|+.+...    ++..+++.+. ++|++||...+.                +.
T Consensus        77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------~~  140 (273)
T PRK06182         77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKI----------------YT  140 (273)
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcC----------------CC
Confidence            9999999754322    234567788899888544    4455666664 899999975431                11


Q ss_pred             CCCCchHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCCCCCCCc--------cHHHHHHHHHHcCCCeEEecCCc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDG--------RVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                      .....|+.+|...+.+.+.++.   ..+++++++|||.+.++.......        .............  +   ....
T Consensus       141 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~  215 (273)
T PRK06182        141 PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAAS--M---RSTY  215 (273)
T ss_pred             CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHH--H---HHhh
Confidence            1124599999999998876654   358999999999998875211000        0000000000000  0   0001


Q ss_pred             ceeecccHHHHHHHHHHHHhCCCC-CcEEecC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGENT-GPINIGN  270 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~~-~~~~~~~  270 (346)
                      ....+.+++|+|++++.++..... ..|+++.
T Consensus       216 ~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~  247 (273)
T PRK06182        216 GSGRLSDPSVIADAISKAVTARRPKTRYAVGF  247 (273)
T ss_pred             ccccCCCHHHHHHHHHHHHhCCCCCceeecCc
Confidence            123467899999999999986553 4555543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5e-18  Score=149.12  Aligned_cols=213  Identities=16%  Similarity=0.136  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||.+++++|+++| ++|+++.|............+.  ..++.++.+|+.+....            
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G-~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEG-ADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999 9999998864322222222222  13577899999986432            


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+||......     ..++....++.|+.++..+++++...   +.++|++||...+...              
T Consensus       124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~--------------  189 (290)
T PRK06701        124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN--------------  189 (290)
T ss_pred             CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC--------------
Confidence            5899999998643211     12345678899999999999988653   2489999998876421              


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                        .....|+.+|.+.+.+++.++.+.   +++++.++||.++.+.....   .....+.....         ......+.
T Consensus       190 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~---~~~~~~~~~~~---------~~~~~~~~  255 (290)
T PRK06701        190 --ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD---FDEEKVSQFGS---------NTPMQRPG  255 (290)
T ss_pred             --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc---cCHHHHHHHHh---------cCCcCCCc
Confidence              112459999999999999988764   79999999999988753211   11112221111         11123578


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++|+|++++.++....    +..+++.++.
T Consensus       256 ~~~dva~~~~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        256 QPEELAPAYVFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEeCCCc
Confidence            89999999999987653    3456776654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.5e-18  Score=145.96  Aligned_cols=209  Identities=18%  Similarity=0.154  Sum_probs=144.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .+++++||||+|+||+++++.|+++| ++|++++|+..    .........+..++.+|+.+....        .+|+||
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g-~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi   82 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRG-ARVVAAARNAA----ALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLV   82 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence            35799999999999999999999999 99999998542    122211122466788999886432        489999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |++|......    ...+..+.+..|+.++..+++++.+.    +  .+||++||...+..                ..+
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~  146 (245)
T PRK07060         83 NCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVG----------------LPD  146 (245)
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCC----------------CCC
Confidence            9998754321    22345667789999999998877543    2  38999999876532                122


Q ss_pred             CCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      ...|+.+|.+.|.+++.++..   .+++++.+||+.++++........  ...........         ....+++++|
T Consensus       147 ~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~d  215 (245)
T PRK07060        147 HLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD--PQKSGPMLAAI---------PLGRFAEVDD  215 (245)
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC--HHHHHHHHhcC---------CCCCCCCHHH
Confidence            356999999999999988765   379999999999998753211111  01111111110         1235889999


Q ss_pred             HHHHHHHHHhCCC----CCcEEecCC
Q 019060          250 MVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       250 va~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +|++++.++..+.    +..+++.++
T Consensus       216 ~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        216 VAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             HHHHHHHHcCcccCCccCcEEeECCC
Confidence            9999999997654    345666554

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.81  E-value=2.3e-18  Score=148.12  Aligned_cols=203  Identities=18%  Similarity=0.131  Sum_probs=139.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      ++++|+||||+|+||++++++|+++| ++|++++|+..... ...+.. ..++.++++|+.+...            .++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g-~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEG-ARVAITGRDPASLE-AARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCHHHHH-HHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999 99999988532111 111111 1357788999987532            258


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH---cCCeEEEEeccc-ccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSE-VYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~r~i~~SS~~-v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+|||+||......    ...++...++.|+.++..+++++..   .+.++|++||.. .++.                 
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-----------------  144 (249)
T PRK06500         82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-----------------  144 (249)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-----------------
Confidence            99999998654322    2345677899999999999999874   234778877754 3431                 


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      .....|+.+|.+.|.+++.++.+.   +++++++||+.+++|.....  .......+........++.         -+.
T Consensus       145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  215 (249)
T PRK06500        145 PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG---------RFG  215 (249)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC---------CCc
Confidence            123579999999999998887653   79999999999998742110  0111222333333222221         245


Q ss_pred             cHHHHHHHHHHHHhCCC
Q 019060          246 YVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~  262 (346)
                      .++|+|++++.++..+.
T Consensus       216 ~~~~va~~~~~l~~~~~  232 (249)
T PRK06500        216 TPEEIAKAVLYLASDES  232 (249)
T ss_pred             CHHHHHHHHHHHcCccc
Confidence            78999999999887543

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3e-18  Score=148.66  Aligned_cols=202  Identities=12%  Similarity=0.114  Sum_probs=140.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      +++||||||+|+||++++++|++.| ++|++++|+............. ...+.++.+|+.+...            .++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAG-AQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999 9999999864322211111111 2357788999998643            258


Q ss_pred             CEEEEcccCCCccccc-----cChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFYK-----YNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|........     +...+.++.|+.++.++++.+..    ...++|++||...+..                
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  143 (263)
T PRK06181         80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG----------------  143 (263)
T ss_pred             CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC----------------
Confidence            9999999875433222     22466789999999999988743    2348999999876632                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...|.+.+.++..   .++++++++||.+..+....        ...  ..+....  ..+.....+++
T Consensus       144 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~--------~~~--~~~~~~~--~~~~~~~~~~~  211 (263)
T PRK06181        144 VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR--------ALD--GDGKPLG--KSPMQESKIMS  211 (263)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh--------hcc--ccccccc--cccccccCCCC
Confidence            223357999999999998877643   47899999999988764210        000  0111111  11112237899


Q ss_pred             HHHHHHHHHHHHhCCC
Q 019060          247 VSDMVDGLIRLMEGEN  262 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~  262 (346)
                      ++|+|++++.+++...
T Consensus       212 ~~dva~~i~~~~~~~~  227 (263)
T PRK06181        212 AEECAEAILPAIARRK  227 (263)
T ss_pred             HHHHHHHHHHHhhCCC
Confidence            9999999999998543

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.2e-17  Score=146.02  Aligned_cols=158  Identities=18%  Similarity=0.180  Sum_probs=118.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IE   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------------~~   97 (346)
                      ++++|+||||+|+||++++++|.+.| ++|++++|+...    +..+. ..++.++.+|+++.+.             .+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G-~~Vi~~~r~~~~----~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~   76 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDG-WRVFATCRKEED----VAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGR   76 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHH----HHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46799999999999999999999999 999999985422    22221 2367889999998632             14


Q ss_pred             CCEEEEcccCCCccccc----cChHHHHHHHHHH----HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||........    ++....+++|+.+    +..++..+++.+. ++|++||...+.                
T Consensus        77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~----------------  140 (277)
T PRK05993         77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV----------------  140 (277)
T ss_pred             ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC----------------
Confidence            89999999875543222    3345678899988    5556667777665 899999976542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~  210 (346)
                      +..+...|+.+|.+.|.+.+.++.   ..++++++++||.+-.+.
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~  185 (277)
T PRK05993        141 PMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF  185 (277)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence            223346799999999999887764   358999999999887653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.80  E-value=2.2e-18  Score=148.34  Aligned_cols=214  Identities=17%  Similarity=0.126  Sum_probs=144.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++|||||+|+||++++++|++.| ++|++++|+............. ..++.++.+|+.+....            ++
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEG-AKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999 9999998864322211111111 23588899999986432            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ........++.|+.++..+++++.    +.+. ++|++||...+...               
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~---------------  146 (250)
T TIGR03206        82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS---------------  146 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC---------------
Confidence            99999998643222    122345678999999998887764    4444 89999998776421               


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc--cHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       .....|+.+|.+.+.+.+.++.+.   +++++++||+.++++.......  .-...+...+....+.         ..+
T Consensus       147 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  216 (250)
T TIGR03206       147 -SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL---------GRL  216 (250)
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc---------cCC
Confidence             123469999999999988887664   7999999999998874211000  0001111221211111         124


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+|+|+++..++..+.    ++.+++.++
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       217 GQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             cCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            567999999999887543    446777665

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.1e-18  Score=150.29  Aligned_cols=208  Identities=17%  Similarity=0.132  Sum_probs=140.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      +++|+||||+|+||++++++|+++| ++|++++|+.....       ...++.++.+|+.|.+..            .+|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g-~~V~~~~r~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAG-YRVFGTSRNPARAA-------PIPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCChhhcc-------ccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            5689999999999999999999999 99999998642211       123678999999987432            489


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+..                .
T Consensus        76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~  139 (270)
T PRK06179         76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP----------------A  139 (270)
T ss_pred             EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC----------------C
Confidence            9999999754322    22345778899999988888774    55555 8999999765531                1


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc--cHHHHH--HHHHHcCCCeEEecCCcceee
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG--RVVSNF--IAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      .....|+.+|...|.+.+.++.+   .++++++++|+.+.++.......  ..+...  ...... ..+.     .....
T Consensus       140 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~  213 (270)
T PRK06179        140 PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVS-KAVA-----KAVKK  213 (270)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHH-HHHH-----hcccc
Confidence            12356999999999998887654   58999999999998775321110  000000  000000 0000     00112


Q ss_pred             cccHHHHHHHHHHHHhCCCCCcEEec
Q 019060          244 FCYVSDMVDGLIRLMEGENTGPINIG  269 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~~~~~~~~  269 (346)
                      ....+|+|+.++.++..+..+..+..
T Consensus       214 ~~~~~~va~~~~~~~~~~~~~~~~~~  239 (270)
T PRK06179        214 ADAPEVVADTVVKAALGPWPKMRYTA  239 (270)
T ss_pred             CCCHHHHHHHHHHHHcCCCCCeeEec
Confidence            45678999999999987664443333

>PRK05717 oxidoreductase; Validated

Probab=99.80  E-value=6.1e-18  Score=146.09  Aligned_cols=210  Identities=14%  Similarity=0.058  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++++||||+|+||++++++|+++| ++|++++|+...... ..+.. ...+.++.+|+.+....            ++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g-~~v~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEG-WQVVLADLDRERGSK-VAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcC-CEEEEEcCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 999999875422211 11112 23577899999986432            48


Q ss_pred             CEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......      ...++...++.|+.++.++++++..    .+.++|++||...+..               
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~---------------  150 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS---------------  150 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC---------------
Confidence            99999999754311      2245678899999999999999853    2348999999765421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                       ......|+.+|...|.+++.++.+.  ++++.+++|+.+.++.....   ....+.. ..... .+       ...+.+
T Consensus       151 -~~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~---~~~~~~~-~~~~~-~~-------~~~~~~  217 (255)
T PRK05717        151 -EPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR---RAEPLSE-ADHAQ-HP-------AGRVGT  217 (255)
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc---cchHHHH-HHhhc-CC-------CCCCcC
Confidence             1122569999999999999988775  47889999999998742211   0011111 11111 11       124678


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ++|+|.++..++....    +..+.+.++
T Consensus       218 ~~~va~~~~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        218 VEDVAAMVAWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             HHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            8999999998886532    334555543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.9e-18  Score=145.64  Aligned_cols=214  Identities=14%  Similarity=0.059  Sum_probs=144.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++|++|||||+|+||++++++|++.| +.|+++.+........+...+  ....+.++.+|+++....            
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHG-FDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999 899887764322222222211  123577899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ........+++|+.++..+++++...    + .++|++||...+..              
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~--------------  152 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL--------------  152 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC--------------
Confidence            4899999998654321    22456778899999999998877643    2 26888887654321              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                        ......|+.+|...|.+.+.++++.  .+.+++++||.++.....     ....+ .........         ....
T Consensus       153 --~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~-~~~~~~~~~---------~~~~  215 (258)
T PRK09134        153 --NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDF-ARQHAATPL---------GRGS  215 (258)
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHH-HHHHhcCCC---------CCCc
Confidence              1112469999999999999987764  378999999988754311     11112 111211111         1246


Q ss_pred             cHHHHHHHHHHHHhCCC--CCcEEecCCCCCCH
Q 019060          246 YVSDMVDGLIRLMEGEN--TGPINIGNPGEFTM  276 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~  276 (346)
                      +++|+|++++.+++.+.  +..+++.++..+++
T Consensus       216 ~~~d~a~~~~~~~~~~~~~g~~~~i~gg~~~~~  248 (258)
T PRK09134        216 TPEEIAAAVRYLLDAPSVTGQMIAVDGGQHLAW  248 (258)
T ss_pred             CHHHHHHHHHHHhcCCCcCCCEEEECCCeeccc
Confidence            78999999999998765  44677777665544

>PRK09186 flagellin modification protein A; Provisional

Probab=99.80  E-value=3.5e-18  Score=147.67  Aligned_cols=217  Identities=17%  Similarity=0.175  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|+||||||+|+||+++++.|+++| ++|++++|+.........+.   .....+.++.+|+.+.+..           
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAG-GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 99999988643322221111   1223466789999987432           


Q ss_pred             -CCCEEEEcccCCCcc-------ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPI-------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                       .+|+|||+|+.....       .........++.|+.+...+++++    ++.+. ++|++||...+........ +. 
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~-~~-  159 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIY-EG-  159 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhc-cc-
Confidence             389999999743211       112345666778887776665544    44454 8999999765432211111 11 


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                          .+......|+.+|...|.+.+.++.+   .++++++++|+.++++..        ..+........         .
T Consensus       160 ----~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~--------~~~~~~~~~~~---------~  218 (256)
T PRK09186        160 ----TSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP--------EAFLNAYKKCC---------N  218 (256)
T ss_pred             ----cccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC--------HHHHHHHHhcC---------C
Confidence                12222246999999999999877765   368999999998876531        11222211111         1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---CCc-EEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~~~-~~~~~~  271 (346)
                      ...+++++|+|++++.++.+..   .|. +.+.++
T Consensus       219 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        219 GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             ccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            1247899999999999997543   344 444443

>PRK07985 oxidoreductase; Provisional

Probab=99.80  E-value=1.2e-17  Score=146.93  Aligned_cols=214  Identities=16%  Similarity=0.110  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC-CcchhhhhcC--CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIG--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|+++.|.... ..+.+.....  ..++.++.+|+++.+..           
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G-~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREG-ADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35799999999999999999999999 999888764321 1122222221  23467889999986432           


Q ss_pred             -CCCEEEEcccCCCc-----cccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|++||+||....     ....+++...+++|+.++..+++++...   +.++|++||...+..              
T Consensus       127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~--------------  192 (294)
T PRK07985        127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQP--------------  192 (294)
T ss_pred             CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccC--------------
Confidence             58999999986421     1123566788999999999999887642   348999999887632              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|...+.+.+.++.+   .++++.+++||.++++.......  ...........  .+       ...+
T Consensus       193 --~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--~~~~~~~~~~~--~~-------~~r~  259 (294)
T PRK07985        193 --SPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDKIPQFGQQ--TP-------MKRA  259 (294)
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--CHHHHHHHhcc--CC-------CCCC
Confidence              112246999999999999988776   48999999999999885321100  01111111111  11       1135


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ...+|+|++++.++....    +..+.+.++.
T Consensus       260 ~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        260 GQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            678999999999987543    3456666543

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3e-18  Score=148.14  Aligned_cols=191  Identities=11%  Similarity=0.067  Sum_probs=134.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |+|+|+||||+|+||++++++|+++| +.|++++|+.....+.........++.++.+|+++.+..            .+
T Consensus         1 ~~~~vlItGas~gIG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          1 MPLKVFITGASSGIGQALAREYARQG-ATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            35799999999999999999999999 899999986422111111111112678899999986432            38


Q ss_pred             CEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHH----HHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLG----LAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||......     ..+++...+++|+.++..+++    ++++.+. ++|++||...+.                
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~----------------  143 (257)
T PRK07024         80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVR----------------  143 (257)
T ss_pred             CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcC----------------
Confidence            99999999754321     124467788999999988776    4455554 899999976542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+   .++++++++|+.+.++....                ...   ..    ..++
T Consensus       144 ~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----------------~~~---~~----~~~~  200 (257)
T PRK07024        144 GLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAH----------------NPY---PM----PFLM  200 (257)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhc----------------CCC---CC----CCcc
Confidence            1112346999999999999887643   48999999999998763110                000   00    0236


Q ss_pred             cHHHHHHHHHHHHhCC
Q 019060          246 YVSDMVDGLIRLMEGE  261 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~  261 (346)
                      ..+++++.++.++.+.
T Consensus       201 ~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        201 DADRFAARAARAIARG  216 (257)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            7899999999999754

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.7e-18  Score=149.87  Aligned_cols=217  Identities=16%  Similarity=0.165  Sum_probs=144.5

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      +..++++|||||+|+||++++++|++.| +.|++++|+.... ....... ...++.++.+|+++.+..           
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEG-AIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcC-CcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            3446899999999999999999999999 9999998865332 1111111 123578899999986532           


Q ss_pred             -CCCEEEEcccCCCcccc---ccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 -EVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                       ++|+|||+||.......   .++....++.|+.+...+.+++..    .+.++|++||...+.                
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------  145 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALT----------------  145 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhcc----------------
Confidence             58999999985432211   144567788999998888877643    223899999977642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccH--HHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV--VSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +..+...|+.+|...|.+++.++.+   .+++++.++||.++++........+  ...........  ++.   +   ..
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~---~---~~  217 (258)
T PRK08628        146 GQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL---G---HR  217 (258)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc---c---cc
Confidence            1123357999999999999988754   4799999999999987421000000  00011111111  111   0   14


Q ss_pred             cccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ++.++|+|++++.++....   .| .+.+.++
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  249 (258)
T PRK08628        218 MTTAEEIADTAVFLLSERSSHTTGQWLFVDGG  249 (258)
T ss_pred             CCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence            6788999999999987643   44 4555443

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.80  E-value=9.2e-18  Score=145.29  Aligned_cols=215  Identities=16%  Similarity=0.102  Sum_probs=146.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||.+++++|+++| +.|++++|+............. ..++.++.+|+++....            .
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAG-ARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 9999999864322111111111 23577899999986433            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||......    ........++.|+.++..+++++...     +. +||++||...+.....           
T Consensus        90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-----------  158 (259)
T PRK08213         90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-----------  158 (259)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----------
Confidence            899999998643222    22345667889999999999987554     44 8999999765432110           


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       ...+...|+.+|...|.+++.++++.   ++++.+++|+.+-.+..    ...++.+........++.         .+
T Consensus       159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~----~~~~~~~~~~~~~~~~~~---------~~  224 (259)
T PRK08213        159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMT----RGTLERLGEDLLAHTPLG---------RL  224 (259)
T ss_pred             -cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcch----hhhhHHHHHHHHhcCCCC---------CC
Confidence             01233579999999999999987764   68899999988866531    223344444433333222         23


Q ss_pred             ccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ...+|++..++.++....   .| .+++.++
T Consensus       225 ~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        225 GDDEDLKGAALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            457999999988886543   34 4555543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.80  E-value=3.1e-18  Score=145.20  Aligned_cols=200  Identities=15%  Similarity=0.111  Sum_probs=135.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi~  103 (346)
                      +|++|||||+|+||+++++.|+++  ++|++++|+..... .+...  .+.+.++.+|+.+....        ++|+|||
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~--~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT--HTLLLGGRPAERLD-ELAAE--LPGATPFPVDLTDPEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh--CCEEEEeCCHHHHH-HHHHH--hccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence            579999999999999999999987  88999998642211 11111  13578899999986432        5999999


Q ss_pred             cccCCCccc----cccChHHHHHHHHHH----HHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          104 LACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       104 ~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      ++|......    ...+....++.|+.+    +..+++++++.+.++|++||...++.                ..+...
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~----------------~~~~~~  141 (227)
T PRK08219         78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRA----------------NPGWGS  141 (227)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCc----------------CCCCch
Confidence            998754221    112345567788887    44555555666669999999876532                122356


Q ss_pred             hHHhHHHHHHHHHHHHHHh-C-CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQH-G-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~-~-~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      |+.+|...|.+++.++... . +++..++|+.+.++..        ..+...  .+..       .....+++++|+|++
T Consensus       142 y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~--------~~~~~~--~~~~-------~~~~~~~~~~dva~~  204 (227)
T PRK08219        142 YAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQ--------RGLVAQ--EGGE-------YDPERYLRPETVAKA  204 (227)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHh--------hhhhhh--hccc-------cCCCCCCCHHHHHHH
Confidence            9999999999888876542 3 6888888876654421        111110  0110       112368999999999


Q ss_pred             HHHHHhCCC-CCcEEec
Q 019060          254 LIRLMEGEN-TGPINIG  269 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~  269 (346)
                      ++.+++++. ..++++.
T Consensus       205 ~~~~l~~~~~~~~~~~~  221 (227)
T PRK08219        205 VRFAVDAPPDAHITEVV  221 (227)
T ss_pred             HHHHHcCCCCCccceEE
Confidence            999998776 3456654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.80  E-value=1.4e-17  Score=143.51  Aligned_cols=207  Identities=17%  Similarity=0.109  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||+.++++|++.| ++|+++.|+.      ...  ...++..+.+|+.+.+..            .+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G-~~v~~~~~~~------~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAG-AKVIGFDQAF------LTQ--EDYPFATFVLDVSDAAAVAQVCQRLLAETGPL   77 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecch------hhh--cCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999 9999998854      111  123578899999986432            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ...++...++.|+.+...+++++..    .+ .++|++||.....                +
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~----------------~  141 (252)
T PRK08220         78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV----------------P  141 (252)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc----------------C
Confidence            99999998754322    2345677889999999999887642    33 3899999976432                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCcc------HHHHHHHHHHcCCCeEEecCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGR------VVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                      ..+...|+.+|...|.+++.++.+   .++++++++|+.++++........      .+.........+         ..
T Consensus       142 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  212 (252)
T PRK08220        142 RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLG---------IP  212 (252)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhc---------CC
Confidence            233467999999999999888766   589999999999998852110000      000001111111         11


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+++++|+|++++.++....    +..+.+.++
T Consensus       213 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        213 LGKIARPQEIANAVLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             CcccCCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence            2358899999999999886543    334555554

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.79  E-value=1.5e-17  Score=142.80  Aligned_cols=211  Identities=16%  Similarity=0.143  Sum_probs=142.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||||+||++++++|++.| ++|+++.|+...........+  ....+.++.+|+.+....            
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQG-ANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35799999999999999999999999 999888775432222222211  124678889999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEecccc-cCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEV-YGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||++|......    ....+...+..|+.++..+++++...    +. +||++||... ++.             
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-------------  149 (248)
T PRK05557         83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-------------  149 (248)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-------------
Confidence            5899999998654322    22345567789999999988877643    33 7999999643 331             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                          .....|+.+|.+.|.+++.+++.   .++++++++|+.+.++...    ..............+.         ..
T Consensus       150 ----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~----~~~~~~~~~~~~~~~~---------~~  212 (248)
T PRK05557        150 ----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTD----ALPEDVKEAILAQIPL---------GR  212 (248)
T ss_pred             ----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccc----ccChHHHHHHHhcCCC---------CC
Confidence                12356999999999888877654   3789999999988655321    1112222222221111         23


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +.+++|+++++..++....    +..+++.++.
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        213 LGQPEEIASAVAFLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccccEEEecCCc
Confidence            5688999999998886522    4578887653

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.4e-17  Score=143.90  Aligned_cols=213  Identities=16%  Similarity=0.072  Sum_probs=140.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+++||||+|+||++++++|.+.| ++|+++.|.....   .... ...++.++.+|+.+.+..            ++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~---~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREG-AKVAVLYNSAENE---AKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCcHHH---HHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 9998877643221   1111 122578899999987532            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHH----HHHHHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ...+....+++|+.++..+.    ..+++.+ .++|++||...++.               +
T Consensus        81 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------------~  145 (255)
T PRK06463         81 DVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT---------------A  145 (255)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC---------------C
Confidence            99999998753211    23456678899999965554    4444444 38999999877642               1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ......|+.+|.+.+.+++.++.+   .++++++++||.+-.+...... ......+........+         ...+.
T Consensus       146 ~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  216 (255)
T PRK06463        146 AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV---------LKTTG  216 (255)
T ss_pred             CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC---------cCCCc
Confidence            122356999999999999988765   3789999999988654321100 0001111111111111         12356


Q ss_pred             cHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ..+|+|++++.++....   .| .+.+.++.
T Consensus       217 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        217 KPEDIANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             CHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            78999999999987543   34 56665544

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.79  E-value=1.8e-17  Score=142.98  Aligned_cols=211  Identities=16%  Similarity=0.156  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E-   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~-   97 (346)
                      ++++||||||+|+||+++++.|++.| ++|+++.+........+..... .++.++.+|+.+....            . 
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREG-ARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999 8888765533222122222122 3678899999886432            2 


Q ss_pred             CCEEEEcccCCCc----------cccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCC
Q 019060           98 VDQIYHLACPASP----------IFYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        98 ~d~vi~~a~~~~~----------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                      +|++||+|+....          ....++..+.++.|+.+...+++++.    +.+. ++|++||....           
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~-----------  150 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ-----------  150 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc-----------
Confidence            8999999975311          01223456778999999999998875    2333 89999986432           


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                           .+..+...|+.+|.+.|.+++.++++.   ++++..++||.+..+.....   ...........  ..+.     
T Consensus       151 -----~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~--~~~~-----  215 (253)
T PRK08642        151 -----NPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA---TPDEVFDLIAA--TTPL-----  215 (253)
T ss_pred             -----CCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc---CCHHHHHHHHh--cCCc-----
Confidence                 133344679999999999999988763   68899999998876532110   01112221111  1111     


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                        ..+.+.+|+|++++.++....    +..+.+.++
T Consensus       216 --~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        216 --RKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             --CCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence              247899999999999997543    345666654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.79  E-value=2.4e-17  Score=141.73  Aligned_cols=209  Identities=12%  Similarity=0.066  Sum_probs=144.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||.+++++|+++| +.|++++|+..   ........  ...+..+.+|+++.+..            
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G-~~vi~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAG-ADIVGAGRSEP---SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCchH---HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 99999998532   11111111  23578899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ...++...++.|+.+...+++++..    .+  .++|++||...+..             
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  146 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQG-------------  146 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccC-------------
Confidence            5999999999754322    1235567788999999988887643    33  38999999877642             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                         ......|+.+|.+.+.+.+.++.+.   ++++++++||.+..+........  ..........  +       ....
T Consensus       147 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~--~-------~~~~  212 (248)
T TIGR01832       147 ---GIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD--EDRNAAILER--I-------PAGR  212 (248)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC--hHHHHHHHhc--C-------CCCC
Confidence               1122469999999999999988774   79999999999987642110000  0011111111  1       1136


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCcEEecC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TGPINIGN  270 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~~~~~~~  270 (346)
                      ++..+|+|++++.++....   .|.+....
T Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~d  242 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSASDYVNGYTLAVD  242 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence            8899999999999997533   45444433

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12743 oxidoreductase; Provisional

Probab=99.78  E-value=2.4e-17  Score=142.39  Aligned_cols=212  Identities=16%  Similarity=0.096  Sum_probs=143.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      |++++|||||+|+||++++++|+++| +.|+++.|............+.  ...+.++.+|+.+.+..            
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQG-FDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999 9998876543222222221111  23578899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      .+|+|||++|......    ..++....+.+|+.+...+++++...    +  .++|++||....               
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------------  144 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------------  144 (256)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc---------------
Confidence            5899999998754321    22456778899999999998876542    2  389999997532               


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       .+..+...|+.+|...+.+++.++.+   .+++++.++||.+.++......    ..........  ++.       ..
T Consensus       145 -~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~--~~~-------~~  210 (256)
T PRK12743        145 -TPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD----SDVKPDSRPG--IPL-------GR  210 (256)
T ss_pred             -CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC----hHHHHHHHhc--CCC-------CC
Confidence             12334467999999999998887764   3789999999999987532110    1111111111  111       12


Q ss_pred             cccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      +.+.+|++.++..++....   .| .+.+.++.
T Consensus       211 ~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        211 PGDTHEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            4588999999998886543   34 45555543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.78  E-value=2.4e-17  Score=141.67  Aligned_cols=201  Identities=16%  Similarity=0.137  Sum_probs=132.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +++|||||+|+||++++++|+++| +.|+++ .|+.....+....... ...+..+.+|+.+.+..            .+
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEG-YTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999 898775 4432111111111111 13577899999987432            58


Q ss_pred             CEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |+|||++|......     ...+....++.|+.++..+++++...        +.+||++||...+..            
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~------------  148 (247)
T PRK09730         81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG------------  148 (247)
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC------------
Confidence            99999998643211     12345578899999998777655332        236999999765421            


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        .+ .....|+.+|...|.+++.++.+   .+++++++||+.+|+|......   .+..........++.         
T Consensus       149 --~~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~---~~~~~~~~~~~~~~~---------  213 (247)
T PRK09730        149 --AP-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG---EPGRVDRVKSNIPMQ---------  213 (247)
T ss_pred             --CC-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC---CHHHHHHHHhcCCCC---------
Confidence              01 11135999999999998877654   3899999999999998633211   122222222222211         


Q ss_pred             ecccHHHHHHHHHHHHhCC
Q 019060          243 SFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~  261 (346)
                      ...+.+|+|++++.++..+
T Consensus       214 ~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        214 RGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             CCcCHHHHHHHHHhhcChh
Confidence            1237899999999988754

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.78  E-value=2.5e-17  Score=141.34  Aligned_cols=212  Identities=16%  Similarity=0.078  Sum_probs=144.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++|||||+|+||++++++|.++| +.|+++.|+............  ...++.++.+|+.+....            .
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDG-YRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999 999999886421111111111  123588899999986432            5


Q ss_pred             CCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||++|.....    ...++....++.|+.+..++.++    +++.+. +||++||...+..               
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---------------  145 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---------------  145 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC---------------
Confidence            99999999865422    12345667788999998887554    454444 8999999876532               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ......|+.+|.+.+.+++.++.+   .++++++++|+.+.++.....    ............+         ...+.
T Consensus       146 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~----~~~~~~~~~~~~~---------~~~~~  211 (245)
T PRK12824        146 -QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM----GPEVLQSIVNQIP---------MKRLG  211 (245)
T ss_pred             -CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc----CHHHHHHHHhcCC---------CCCCC
Confidence             112346999999999988887653   378999999999988743211    1122222222111         12355


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .++|+++++..++....    ++.+++.++..
T Consensus       212 ~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12824        212 TPEEIAAAVAFLVSEAAGFITGETISINGGLY  243 (245)
T ss_pred             CHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            78999999988886532    55788887754

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.78  E-value=2.6e-17  Score=142.60  Aligned_cols=210  Identities=14%  Similarity=0.080  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+||||||+|+||++++++|.++| ++|++++|+....        ...++.++.+|+.+.+..            ++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   78 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAG-ARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERLGGV   78 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCC-CEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 9999999864221        123578899999986532            58


Q ss_pred             CEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |+|||+||.....      ...+++...+++|+.++..+.+++    ++.+. ++|++||...+..              
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~--------------  144 (260)
T PRK06523         79 DILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP--------------  144 (260)
T ss_pred             CEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC--------------
Confidence            9999999854211      123456777889999988776554    44443 8999999865421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHH-----------HHHHHHcC-CCe
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-----------FIAQAIRG-EPL  232 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~-----------~~~~~~~~-~~~  232 (346)
                       ...+...|+.+|...+.+++.++.+   .++++++++||.+..+...    .+...           ....+... ..+
T Consensus       145 -~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (260)
T PRK06523        145 -LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAV----ALAERLAEAAGTDYEGAKQIIMDSLGGI  219 (260)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHH----HHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence             1123467999999999998888765   3799999999999887421    11111           11111000 001


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +       ...+..++|+|++++.++....    +..+.+.++...|
T Consensus       220 p-------~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        220 P-------LGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             c-------cCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            1       1235578999999999987543    4467777765544

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.78  E-value=3e-17  Score=141.31  Aligned_cols=212  Identities=17%  Similarity=0.129  Sum_probs=145.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +|+++||||+|+||++++++|++.| ++|++++|+............. ..++.++.+|+.+.+..            ++
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAG-ATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999 9999998754322222111111 23578899999987542            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ........++.|+.++.++++++..    .+. ++|++||...+.                +
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  149 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALW----------------G  149 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc----------------C
Confidence            99999998754322    2234556678999999988887643    223 899999976542                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...|.+++.++.+   .++.+++++||.+..+.......   ..+........         ....+++
T Consensus       150 ~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~---------~~~~~~~  217 (250)
T PRK12939        150 APKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA---DERHAYYLKGR---------ALERLQV  217 (250)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC---hHHHHHHHhcC---------CCCCCCC
Confidence            122356999999999999887654   47899999999887764221111   01222222111         1235788


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++|+|++++.++....    +..+.+.++.
T Consensus       218 ~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        218 PDDVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            9999999999997542    4456666653

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.77  E-value=1.2e-17  Score=143.63  Aligned_cols=199  Identities=14%  Similarity=0.090  Sum_probs=134.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d~  100 (346)
                      |+|+||||+|+||.+++++|+++| ++|++++|+..... .+.... ..++.++.+|+.+.+..            ++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQG-HKVIATGRRQERLQ-ELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            689999999999999999999999 99999998542211 111111 23678899999986432            5999


Q ss_pred             EEEcccCCCc-----cccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          101 IYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       101 vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |||+||....     ....++....++.|+.++..+++++    ++.+. ++|++||...+.                +.
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------~~  141 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PY  141 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC----------------CC
Confidence            9999986421     1123455678899999866665554    44554 899999976531                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .+...|+.+|...|.+.+.++.+.   ++.+.+++||.+.|+.....  . +..-.....  . . .  .   ...++..
T Consensus       142 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~--~-~~~~~~~~~--~-~-~--~---~~~~~~~  209 (248)
T PRK10538        142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV--R-FKGDDGKAE--K-T-Y--Q---NTVALTP  209 (248)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchh--h-ccCcHHHHH--h-h-c--c---ccCCCCH
Confidence            233579999999999998887654   68899999999986642100  0 000000000  0 0 0  0   1135689


Q ss_pred             HHHHHHHHHHHhCCC
Q 019060          248 SDMVDGLIRLMEGEN  262 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~  262 (346)
                      +|+|++++.++..+.
T Consensus       210 ~dvA~~~~~l~~~~~  224 (248)
T PRK10538        210 EDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999999987553

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1.9e-17  Score=143.00  Aligned_cols=211  Identities=17%  Similarity=0.105  Sum_probs=144.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||.+++++|+++| ++|++++|+...  ...........+..+.+|+.+....            ++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G-~~Vi~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKG-ARVALLDRSEDV--AEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHH--HHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 999999986421  1111222234567899999986422            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ...+....++.|+.+..++++++..    .+ .++|++||......                
T Consensus        91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  154 (255)
T PRK06841         91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVA----------------  154 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccC----------------
Confidence            99999999754322    1234566789999999999988754    23 38999999764321                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|.+.+.+.+.++.+   .++++..++||.+..+.......   ..........  ++       ...+.+
T Consensus       155 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~--~~-------~~~~~~  222 (255)
T PRK06841        155 LERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA---GEKGERAKKL--IP-------AGRFAY  222 (255)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc---hhHHHHHHhc--CC-------CCCCcC
Confidence            112246999999999999888776   37899999999988764211000   0111111111  11       124779


Q ss_pred             HHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ++|+|++++.++..+.   .| .+.+.++.
T Consensus       223 ~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        223 PEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            9999999999997643   34 55666554

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3e-17  Score=140.18  Aligned_cols=204  Identities=14%  Similarity=0.048  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++|+||||+|+||++++++|++.| ++|++++|+...............++.++.+|+.+...+            ++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEG-YKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999 899999986422211111111124688899999986432            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---C-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---G-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+|||+++......    ..++....++.|+.+...+++++.+.   + .++|++||...+.                +.
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~~  147 (237)
T PRK07326         84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTN----------------FF  147 (237)
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhcc----------------CC
Confidence            99999998654322    22334567888999999888876532   2 3799999976542                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+.+.++.+   .+++++++||+.+..+.....                ..    .  .....+..
T Consensus       148 ~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~----------------~~----~--~~~~~~~~  205 (237)
T PRK07326        148 AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT----------------PS----E--KDAWKIQP  205 (237)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccc----------------cc----h--hhhccCCH
Confidence            22356999999999888877543   479999999998876542100                00    0  00113688


Q ss_pred             HHHHHHHHHHHhCCC---CCcEEecCCCC
Q 019060          248 SDMVDGLIRLMEGEN---TGPINIGNPGE  273 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~---~~~~~~~~~~~  273 (346)
                      +|+++.++.++..+.   .....+..+.+
T Consensus       206 ~d~a~~~~~~l~~~~~~~~~~~~~~~~~~  234 (237)
T PRK07326        206 EDIAQLVLDLLKMPPRTLPSKIEVRPSRP  234 (237)
T ss_pred             HHHHHHHHHHHhCCccccccceEEecCCC
Confidence            999999999998775   33455554444

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.6e-17  Score=142.34  Aligned_cols=218  Identities=14%  Similarity=0.105  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cC--CCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IG--HPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~~~d~~~~~~~---------   96 (346)
                      .++++|||||+|+||.+++++|++.| +.|+++.+......+.....   +.  ..++.++.+|+++.+..         
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G-~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQG-AKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCC-CcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            35899999999999999999999999 88777765432222222111   11  23578899999986432         


Q ss_pred             ---CCCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 ---EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                         ++|++||+||.....    ....+....+++|+.++..+++++...   +.++++++|......             
T Consensus        86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~-------------  152 (257)
T PRK12744         86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF-------------  152 (257)
T ss_pred             hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc-------------
Confidence               589999999964321    123456778899999999998887643   235666533322210             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                         ......|+.+|.+.|.+.+.++.+.   ++++++++||.+.++...+...   .....   ..+.... ..+.....
T Consensus       153 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~---~~~~~~~-~~~~~~~~  222 (257)
T PRK12744        153 ---TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG---AEAVA---YHKTAAA-LSPFSKTG  222 (257)
T ss_pred             ---CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc---cchhh---ccccccc-ccccccCC
Confidence               0112569999999999999998774   5899999999997764221111   00000   0000000 01111224


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~  272 (346)
                      +.+++|+|+++..+++...   +..+++.++.
T Consensus       223 ~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg~  254 (257)
T PRK12744        223 LTDIEDIVPFIRFLVTDGWWITGQTILINGGY  254 (257)
T ss_pred             CCCHHHHHHHHHHhhcccceeecceEeecCCc
Confidence            7889999999999998532   4467776653

>PRK08324 short chain dehydrogenase; Validated

Probab=99.77  E-value=4.8e-18  Score=165.55  Aligned_cols=223  Identities=17%  Similarity=0.123  Sum_probs=150.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||+.+++.|++.| +.|++++|+...............++..+.+|+++....            ++
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~G-a~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEG-ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 899999986432221111111113678899999986432            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......    ........+++|+.+...+++++.    +.+  .+||++||...+..               
T Consensus       500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~---------------  564 (681)
T PRK08324        500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP---------------  564 (681)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCC---------------
Confidence            99999999654322    224456778999999999977664    333  48999999765421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEecccc-CCCCCCCCccHHHHHHHHHHcCCCe----EEecCCcc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRGEPL----TVQAPGTQ  240 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  240 (346)
                       ......|+.+|...+.+++.++.+.   ++++++++|+.+| ++....  ..+...  .....+...    ..+..+..
T Consensus       565 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~--~~~~~~--~~~~~g~~~~~~~~~~~~~~~  639 (681)
T PRK08324        565 -GPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT--GEWIEA--RAAAYGLSEEELEEFYRARNL  639 (681)
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc--chhhhh--hhhhccCChHHHHHHHHhcCC
Confidence             1223569999999999999987764   5899999999998 553211  111000  000111110    01122334


Q ss_pred             eeecccHHHHHHHHHHHHhC--CC--CCcEEecCCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEG--EN--TGPINIGNPGEF  274 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~--~~--~~~~~~~~~~~~  274 (346)
                      ...+++++|+|++++.++..  ..  +.++++.+|...
T Consensus       640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCchh
Confidence            45789999999999998842  22  457888887654

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.77  E-value=1e-17  Score=144.85  Aligned_cols=208  Identities=15%  Similarity=0.097  Sum_probs=132.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------~~d~vi  102 (346)
                      |+++||||||||+||++++++|++.| +.|++++|+.... ..+....  ...++.++.+|+.+....      ++|+||
T Consensus         1 m~~~vlVtGasg~iG~~ia~~l~~~G-~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi   78 (257)
T PRK09291          1 MSKTILITGAGSGFGREVALRLARKG-HNVIAGVQIAPQV-TALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLL   78 (257)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence            35789999999999999999999999 9999999854221 1111111  123578889999986433      799999


Q ss_pred             EcccCCCcccc----ccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060          103 HLACPASPIFY----KYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      |+||.......    .+.....+++|+.+...+.+.    +++.+. ++|++||...+..                ....
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~----------------~~~~  142 (257)
T PRK09291         79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT----------------GPFT  142 (257)
T ss_pred             ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC----------------CCCc
Confidence            99986543222    233456678888877666553    444454 8999999754321                1123


Q ss_pred             CchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCC-C-eEEecCCcceeecccHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-P-LTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~v~v~  248 (346)
                      ..|+.+|...|.+.+.++.+   .+++++++|||.+..+..    ......+. ...... . +.. .........+..+
T Consensus       143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~----~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~  216 (257)
T PRK09291        143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFN----DTMAETPK-RWYDPARNFTDP-EDLAFPLEQFDPQ  216 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccch----hhhhhhhh-hhcchhhHHHhh-hhhhccccCCCHH
Confidence            56999999999988876654   589999999987643321    11111110 000000 0 000 0111223457888


Q ss_pred             HHHHHHHHHHhCCC
Q 019060          249 DMVDGLIRLMEGEN  262 (346)
Q Consensus       249 Dva~~i~~~~~~~~  262 (346)
                      |+++.++.++..+.
T Consensus       217 ~~~~~~~~~l~~~~  230 (257)
T PRK09291        217 EMIDAMVEVIPADT  230 (257)
T ss_pred             HHHHHHHHHhcCCC
Confidence            99888888876543

>PRK08264 short chain dehydrogenase; Validated

Probab=99.77  E-value=4.7e-17  Score=139.02  Aligned_cols=156  Identities=19%  Similarity=0.148  Sum_probs=118.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~v  101 (346)
                      .+++|+||||+|+||++++++|+++| + .|+++.|+.....+      ...++.++.+|+.+.+..        .+|+|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARG-AAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-cccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            35799999999999999999999999 7 99999986432211      224688899999986442        48999


Q ss_pred             EEcccCC-Cccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          102 YHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       102 i~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      ||++|.. ....    ..+++...+..|+.+...+++++..    .+. ++|++||...+.                +..
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~----------------~~~  141 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV----------------NFP  141 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc----------------CCC
Confidence            9999872 2211    2244566788999999999888653    333 799999987653                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCC
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGP  209 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~  209 (346)
                      +...|+.+|...|.+.+.++.+.   +++++++||+.+.++
T Consensus       142 ~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~  182 (238)
T PRK08264        142 NLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD  182 (238)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence            33579999999999988877653   789999999988765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.77  E-value=3.5e-17  Score=140.47  Aligned_cols=211  Identities=21%  Similarity=0.155  Sum_probs=141.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++|+||||+|+||++++++|+++| +.|+++.|+.......+.+.+  ...++.++.+|+.+....            
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADG-FAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 888877764322211121111  123578899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      ++|+|||+||......    ...+....+++|+.++.++++++.+.   +.++|++||...+.                +
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~  146 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIAL----------------P  146 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccC----------------C
Confidence            5999999998654221    22345677889999999998877643   23899999876542                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+++.++.+.   ++.+++++|+.+-.+.....   ........+....++         ..+.+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~~---------~~~~~  214 (245)
T PRK12937        147 LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG---KSAEQIDQLAGLAPL---------ERLGT  214 (245)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc---CCHHHHHHHHhcCCC---------CCCCC
Confidence            2234579999999999998876653   68899999998776532110   011222222222111         13457


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGN  270 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~  270 (346)
                      ++|++++++.++..+.    +..+++.+
T Consensus       215 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        215 PEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             HHHHHHHHHHHcCccccCccccEEEeCC
Confidence            7999999999886543    33555554

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.77  E-value=6.5e-17  Score=140.29  Aligned_cols=202  Identities=12%  Similarity=0.060  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||.+++++|+++| ++|++++|+..... .+...+.  ..++.++.+|+++....            
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G-~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAG-ADVLIAARTESQLD-EVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 89999998642211 1111111  23578889999987542            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VG-ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++.+++..     .+ .++|++||.....              
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~--------------  152 (263)
T PRK07814         87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL--------------  152 (263)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC--------------
Confidence            6899999998643322    2245677889999999999998863     23 3899999965321              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        +..+...|+.+|.+.+.+++.++.+.  +++++.++|+.+..+........  ..+..... +. ..       ...+
T Consensus       153 --~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~-~~-~~-------~~~~  219 (263)
T PRK07814        153 --AGRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN--DELRAPME-KA-TP-------LRRL  219 (263)
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC--HHHHHHHH-hc-CC-------CCCC
Confidence              12234579999999999999888764  46788899988865432110000  11111111 11 11       1135


Q ss_pred             ccHHHHHHHHHHHHhCC
Q 019060          245 CYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~  261 (346)
                      ..++|+|++++.++...
T Consensus       220 ~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        220 GDPEDIAAAAVYLASPA  236 (263)
T ss_pred             cCHHHHHHHHHHHcCcc
Confidence            57899999999988653

>PRK08643 acetoin reductase; Validated

Probab=99.77  E-value=2.4e-17  Score=142.46  Aligned_cols=216  Identities=17%  Similarity=0.122  Sum_probs=139.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |++++|||||+|+||+++++.|+++| ++|++++|+............. ..++.++.+|+.+++..            +
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDG-FKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999 9999999864322111111111 23577899999987432            5


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||.......    .++....+++|+.++..+++++..    .+  .++|++||...+..              
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  145 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVG--------------  145 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccC--------------
Confidence            8999999986532221    234567788999988777666543    22  48999999764321              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCcc------HHHHHHHHHHcCCCeEEecCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGR------VVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  238 (346)
                        ......|+.+|...+.+.+.++.+   .+++++.++|+.+..+........      ....+........ +      
T Consensus       146 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------  216 (256)
T PRK08643        146 --NPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD-I------  216 (256)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc-C------
Confidence              112356999999999998887765   478999999999887642100000      0000000000000 1      


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                       ....+...+|+|++++.++....   .| .+.+.++
T Consensus       217 -~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        217 -TLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             -CCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence             11235678999999999886543   44 4555554

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.77  E-value=5.2e-17  Score=141.72  Aligned_cols=191  Identities=15%  Similarity=0.074  Sum_probs=134.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||||.||+.++++|+++| +.|++++|+..... .....+  ..+.++.+|+.+.+..            ++
T Consensus         4 ~~~~ilVtGasggiG~~la~~l~~~G-~~v~~~~r~~~~~~-~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          4 RGKVVAITGGARGIGLATARALAALG-ARVAIGDLDEALAK-ETAAEL--GLVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHh--ccceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999 99999988532211 111111  2477899999987532            58


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||.......    .+.....+++|+.++..+++++    ++.+. ++|++||...+.                +
T Consensus        80 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  143 (273)
T PRK07825         80 DVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI----------------P  143 (273)
T ss_pred             CEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccC----------------C
Confidence            999999997543222    2345667889998888876655    44454 899999987542                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+   .++++++++|+.+-.+...                +..      ......++.
T Consensus       144 ~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~----------------~~~------~~~~~~~~~  201 (273)
T PRK07825        144 VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA----------------GTG------GAKGFKNVE  201 (273)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc----------------ccc------cccCCCCCC
Confidence            223356999999998877766554   4799999999887654210                000      011235789


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 019060          247 VSDMVDGLIRLMEGENT  263 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~~  263 (346)
                      ++|+|+.++.++.++..
T Consensus       202 ~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        202 PEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999987653

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.76  E-value=6.6e-17  Score=139.01  Aligned_cols=203  Identities=15%  Similarity=0.120  Sum_probs=133.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      |+|+||||||+|+||..+++.|+++| ++|+++.+............+.  ..++.++.+|+.+....            
T Consensus         1 m~k~ilItGas~giG~~la~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          1 MRKVVLITGASRGIGRATAVLAAARG-WSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CCcEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999 8887765432222222211111  23578899999986432            


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHH-Hc-------CCeEEEEecccc-cCCCCCCCCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAK-RV-------GARILLTSTSEV-YGDPLVHPQDES  162 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~-~~-------~~r~i~~SS~~v-~~~~~~~~~~e~  162 (346)
                      .+|+|||+||......     ..++....+++|+.+...+++++. ..       +.++|++||... ++.         
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~---------  150 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGS---------  150 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCC---------
Confidence            5999999998653221     223445678899999888765432 21       126999999764 331         


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            + .....|+.+|...+.+.+.++.+.   +++++++|||.+..+.......   +.........  .+.     
T Consensus       151 ------~-~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~--~~~-----  213 (248)
T PRK06947        151 ------P-NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ---PGRAARLGAQ--TPL-----  213 (248)
T ss_pred             ------C-CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC---HHHHHHHhhc--CCC-----
Confidence                  1 112359999999999988887664   7999999999998874321111   1111111111  110     


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                        ..+..++|+++.++.++.++.
T Consensus       214 --~~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        214 --GRAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             --CCCcCHHHHHHHHHHHcCccc
Confidence              124578999999999887654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.76  E-value=6.8e-17  Score=139.52  Aligned_cols=213  Identities=15%  Similarity=0.144  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||++++++|.++| +.|++++|...... .....+.  ..++.++.+|+.+.+..            
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G-~~vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAAN-HVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 89998888542211 1111111  13567889999987532            


Q ss_pred             CCCEEEEcccCCCcccc---ccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIFY---KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||.......   .++....++.|+.++.++++++.    +.+. ++|++||.....                
T Consensus        88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------  151 (255)
T PRK06113         88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------  151 (255)
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC----------------
Confidence            58999999996543222   24455668999999999998875    3333 899999976431                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|.+.+.+++.++.+   .+++++++.||.+..+...   ....+..........+         ...+.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~---~~~~~~~~~~~~~~~~---------~~~~~  219 (255)
T PRK06113        152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK---SVITPEIEQKMLQHTP---------IRRLG  219 (255)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccc---cccCHHHHHHHHhcCC---------CCCCc
Confidence            2223356999999999999988765   3688999999988765321   1111222222222111         12356


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .++|++++++.++....    +..+++.++..
T Consensus       220 ~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        220 QPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            88999999999987543    44677777644

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.76  E-value=1e-16  Score=138.15  Aligned_cols=208  Identities=16%  Similarity=0.168  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+...      . .....+.++.+|+.+.+..            ++
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g-~~v~~~~r~~~~------~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   76 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAG-ATVVVCGRRAPE------T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRL   76 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCChhh------h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986422      0 1123678899999986432            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----c-C-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-G-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......    ...+....+++|+.++..+++++..    . + .++|++||...+.                
T Consensus        77 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~----------------  140 (252)
T PRK07856         77 DVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR----------------  140 (252)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC----------------
Confidence            99999998653221    2234567889999999999987753    1 2 3899999986542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      +......|+.+|...|.+++.++.+..  +++..++||.+..+........  ...........+         ...+..
T Consensus       141 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~  209 (252)
T PRK07856        141 PSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD--AEGIAAVAATVP---------LGRLAT  209 (252)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC--HHHHHHHhhcCC---------CCCCcC
Confidence            222235799999999999999887643  7888999998876632110000  111111111111         123567


Q ss_pred             HHHHHHHHHHHHhCCC---CC-cEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~-~~~~~~~~~  273 (346)
                      ++|+|++++.++....   .| .+.+.++..
T Consensus       210 p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        210 PADIAWACLFLASDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             HHHHHHHHHHHcCcccCCccCCEEEECCCcc
Confidence            8999999999887543   34 566666544

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.76  E-value=7.1e-17  Score=140.61  Aligned_cols=199  Identities=17%  Similarity=0.104  Sum_probs=136.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      |+|+||||+|+||++++++|+++| ++|++++|+............. ..++.++.+|+.+....            ++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREG-WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999 9999998864332222221111 23677899999986432            599


Q ss_pred             EEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||........    .+.+..+++|+.+...+.++    +++.+. ++|++||...+.                +.
T Consensus        80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~  143 (270)
T PRK05650         80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLM----------------QG  143 (270)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcC----------------CC
Confidence            999999976533222    33455678888777776555    455554 899999987653                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc--cHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      .....|+.+|...+.+.+.++.+.   ++++++++|+.+..+.......  ......+....             ...++
T Consensus       144 ~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------------~~~~~  210 (270)
T PRK05650        144 PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL-------------EKSPI  210 (270)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh-------------hcCCC
Confidence            233579999999998888877763   7899999999998775321111  11111111111             11357


Q ss_pred             cHHHHHHHHHHHHhCC
Q 019060          246 YVSDMVDGLIRLMEGE  261 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~  261 (346)
                      +++|+|+.++.++++.
T Consensus       211 ~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        211 TAADIADYIYQQVAKG  226 (270)
T ss_pred             CHHHHHHHHHHHHhCC
Confidence            8999999999999854

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2.6e-17  Score=139.92  Aligned_cols=213  Identities=13%  Similarity=0.078  Sum_probs=143.8

Q ss_pred             EEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEEEcccC
Q 019060           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIYHLACP  107 (346)
Q Consensus        36 lItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi~~a~~  107 (346)
                      |||||+|+||+.++++|+++| +.|++++|+...............++.++.+|+++....        ++|++||++|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEG-ARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            699999999999999999999 999999986322111111111124578899999987433        48999999986


Q ss_pred             CCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          108 ASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       108 ~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      .....    ...+....+++|+.+..+++++....+. ++|++||...+.                +..+...|+.+|.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~----------------~~~~~~~Y~~sK~a  143 (230)
T PRK07041         80 TPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVR----------------PSASGVLQGAINAA  143 (230)
T ss_pred             CCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcC----------------CCCcchHHHHHHHH
Confidence            54321    2345677889999999999996665444 899999988764                22234579999999


Q ss_pred             HHHHHHHHHHHh-CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          183 AETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       183 ~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      .+.+.+.++.+. +++++.++|+.+-.+............++.......+.         ..+...+|+|++++.++...
T Consensus       144 ~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dva~~~~~l~~~~  214 (230)
T PRK07041        144 LEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA---------RRVGQPEDVANAILFLAANG  214 (230)
T ss_pred             HHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhcCC
Confidence            999999887664 57888999988765431100000001122222211111         12346799999999999865


Q ss_pred             C--CCcEEecCCCCC
Q 019060          262 N--TGPINIGNPGEF  274 (346)
Q Consensus       262 ~--~~~~~~~~~~~~  274 (346)
                      .  ++.|++.++.++
T Consensus       215 ~~~G~~~~v~gg~~~  229 (230)
T PRK07041        215 FTTGSTVLVDGGHAI  229 (230)
T ss_pred             CcCCcEEEeCCCeec
Confidence            4  457888877653

>PRK06398 aldose dehydrogenase; Validated

Probab=99.76  E-value=1.7e-16  Score=137.19  Aligned_cols=206  Identities=16%  Similarity=0.061  Sum_probs=141.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|++.| +.|++++|+....          ..+.++.+|+.++...            ++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G-~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEG-SNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999999 9999999864221          2578899999987432            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..++....+++|+.++..+++++..    .+ .++|++||...+.                +
T Consensus        74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  137 (258)
T PRK06398         74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFA----------------V  137 (258)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhcc----------------C
Confidence            99999999754322    2234566789999999888877643    33 3899999987653                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCC-------ccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDD-------GRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                      ..+...|+.+|...+.+.+.++.+.  .+++.+++||.+-.+......       .......+....  .       ...
T Consensus       138 ~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~  208 (258)
T PRK06398        138 TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWG--E-------MHP  208 (258)
T ss_pred             CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhh--h-------cCC
Confidence            2334679999999999999988764  378899999988655311000       000000011100  0       011


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ...+..++|+|++++.++....    +..+.+.++.
T Consensus       209 ~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        209 MKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             cCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            1246688999999999887543    3345555553

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.76  E-value=4.3e-17  Score=145.56  Aligned_cols=179  Identities=15%  Similarity=0.131  Sum_probs=124.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++|+||||+|+||.++++.|+++| ++|++++|+............ ....+.++.+|+.+...+            +
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRG-WHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            36789999999999999999999999 999999986432222111111 123578899999986432            4


Q ss_pred             CCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEecccccCCCCC----CCCCC
Q 019060           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDPLV----HPQDE  161 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~i~~SS~~v~~~~~~----~~~~e  161 (346)
                      +|+|||+||.....     ...+.+...+++|+.++..+++++..    .+   .|+|++||...+.....    .+..+
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~  163 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA  163 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence            89999999965321     12345677889999999988877653    22   39999999875432110    01010


Q ss_pred             C--C-------------cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh----CCceEEEEeccccCCC
Q 019060          162 S--Y-------------WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPR  210 (346)
Q Consensus       162 ~--~-------------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ivR~~~i~G~~  210 (346)
                      +  +             +....+..|...|+.||.+.+.+.+.++++.    ++.+++++||.|++..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            0  0             0001234566789999999988888877664    6899999999998643

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.76  E-value=9.5e-17  Score=140.44  Aligned_cols=215  Identities=14%  Similarity=0.156  Sum_probs=142.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++||||+|+||++++++|+++| +.|++++|+..........+.. ..++.++.+|+.+....            +
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAG-AKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999 9999999864322221122211 12577899999986422            5


Q ss_pred             CCEEEEcccCCCccc-------------------cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCC
Q 019060           98 VDQIYHLACPASPIF-------------------YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGD  153 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~-------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~  153 (346)
                      +|++||+||...+..                   ..++....+++|+.+...+++++    ++.+ .++|++||...+. 
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~-  166 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFT-  166 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcC-
Confidence            899999998643221                   12345677889999887665543    3443 3899999987763 


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC---CccHHHHHHHHHH
Q 019060          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DGRVVSNFIAQAI  227 (346)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~---~~~~~~~~~~~~~  227 (346)
                                     +..+...|+.+|.+.+.+++.++.+.   ++++.+++||.+..+.....   .............
T Consensus       167 ---------------~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  231 (278)
T PRK08277        167 ---------------PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKIL  231 (278)
T ss_pred             ---------------CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHh
Confidence                           22334569999999999999888765   68999999999988742100   0000011111111


Q ss_pred             cCCCeEEecCCcceeecccHHHHHHHHHHHHhC-CC---CC-cEEecCC
Q 019060          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG-EN---TG-PINIGNP  271 (346)
Q Consensus       228 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~-~~---~~-~~~~~~~  271 (346)
                      ...+         ...+...+|+|++++.++.. ..   .| .+.+.+|
T Consensus       232 ~~~p---------~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        232 AHTP---------MGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             ccCC---------ccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            1111         12366789999999998876 33   34 4555544

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.1e-16  Score=138.00  Aligned_cols=211  Identities=12%  Similarity=0.086  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||..+++.|+++| +.|++++|+............. ..++.++.+|+.+....            .
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKG-AKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35799999999999999999999999 8999998864322222111111 23577889999885332            4


Q ss_pred             CCEEEEcccCCCcc-------------ccccChHHHHHHHHHHHHHHHHHH----HHc-C-CeEEEEecccccCCCCCCC
Q 019060           98 VDQIYHLACPASPI-------------FYKYNPVKTIKTNVIGTLNMLGLA----KRV-G-ARILLTSTSEVYGDPLVHP  158 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~-~r~i~~SS~~v~~~~~~~~  158 (346)
                      +|+|||++|.....             .........+..|+.++..+.+.+    .+. . .++|++||...++.     
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-----  157 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-----  157 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC-----
Confidence            89999999854321             112345567788998887666543    232 2 36999999876642     


Q ss_pred             CCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe
Q 019060          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
                                  .+...|+.+|.+.|.+++.++.+   .+++++.++|+.+.++...    ...+..........+.   
T Consensus       158 ------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~----~~~~~~~~~~~~~~~~---  218 (253)
T PRK08217        158 ------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA----AMKPEALERLEKMIPV---  218 (253)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc----ccCHHHHHHHHhcCCc---
Confidence                        12356999999999999888765   4799999999999887532    1223333332222211   


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPG  272 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~  272 (346)
                            ..+.+++|+|+++..++....  +.++++.++-
T Consensus       219 ------~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg~  251 (253)
T PRK08217        219 ------GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGGL  251 (253)
T ss_pred             ------CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence                  235688999999999887543  4478777653

>PRK09242 tropinone reductase; Provisional

Probab=99.76  E-value=1.2e-16  Score=138.09  Aligned_cols=212  Identities=13%  Similarity=0.112  Sum_probs=144.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCccc------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL------------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~------------   95 (346)
                      .+++++||||+|.||++++++|.++| ++|++++|+.........+..   ...++.++.+|+.+...            
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLG-ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 999999986432221111111   12357788999998643            


Q ss_pred             CCCCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           96 IEVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      .++|+|||++|.....    ...++....+.+|+.+...+++++.    +.+. ++|++||...+.              
T Consensus        87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~--------------  152 (257)
T PRK09242         87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLT--------------  152 (257)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCC--------------
Confidence            2589999999864321    2334567788999999999988764    3343 899999987653              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +..+...|+.+|...+.+++.++.+   .+++++.++||.+.++.......  ............++         .-
T Consensus       153 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~--~~~~~~~~~~~~~~---------~~  219 (257)
T PRK09242        153 --HVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS--DPDYYEQVIERTPM---------RR  219 (257)
T ss_pred             --CCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC--ChHHHHHHHhcCCC---------CC
Confidence              2223356999999999999987655   37999999999998875321101  01222222222211         12


Q ss_pred             cccHHHHHHHHHHHHhCCC---CC-cEEecC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~-~~~~~~  270 (346)
                      +...+|++.+++.++....   .| .+++.+
T Consensus       220 ~~~~~~va~~~~~l~~~~~~~~~g~~i~~~g  250 (257)
T PRK09242        220 VGEPEEVAAAVAFLCMPAASYITGQCIAVDG  250 (257)
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECC
Confidence            4467999999999886532   33 455544

>PRK08017 oxidoreductase; Provisional

Probab=99.76  E-value=6.3e-17  Score=139.82  Aligned_cols=202  Identities=18%  Similarity=0.115  Sum_probs=135.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------------~~~   98 (346)
                      .++|+||||+|+||.++++.|+++| ++|+++.|+...    .... ...++..+.+|+.+...             ..+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g-~~v~~~~r~~~~----~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~   75 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRG-YRVLAACRKPDD----VARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRL   75 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHH----hHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            4689999999999999999999999 999999885422    1111 11257788899887532             247


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHH----HHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |.+||++|......    ...+....++.|+.++.++    ++.+++.+. ++|++||...+.                +
T Consensus        76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~----------------~  139 (256)
T PRK08017         76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI----------------S  139 (256)
T ss_pred             eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc----------------C
Confidence            99999998644221    2234567888999887775    566666665 899999975432                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...|.+.+.++.   ..+++++++|||.+..+..        ..... .....  .....+...+.+++
T Consensus       140 ~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~--------~~~~~-~~~~~--~~~~~~~~~~~~~~  208 (256)
T PRK08017        140 TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFT--------DNVNQ-TQSDK--PVENPGIAARFTLG  208 (256)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchh--------hcccc-hhhcc--chhhhHHHhhcCCC
Confidence            12235699999999998775533   3579999999987654421        11100 00011  11112222346799


Q ss_pred             HHHHHHHHHHHHhCCCCCcE
Q 019060          247 VSDMVDGLIRLMEGENTGPI  266 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~~~~~  266 (346)
                      ++|+++++..+++++....+
T Consensus       209 ~~d~a~~~~~~~~~~~~~~~  228 (256)
T PRK08017        209 PEAVVPKLRHALESPKPKLR  228 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCce
Confidence            99999999999987765433

>PRK06196 oxidoreductase; Provisional

Probab=99.76  E-value=8.7e-17  Score=143.13  Aligned_cols=215  Identities=13%  Similarity=0.075  Sum_probs=137.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      .+++|+||||+|+||++++++|+++| ++|++++|+.....+.... +  .++.++.+|+.+...            .++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G-~~Vv~~~R~~~~~~~~~~~-l--~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i  100 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAG-AHVIVPARRPDVAREALAG-I--DGVEVVMLDLADLESVRAFAERFLDSGRRI  100 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h--hhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            45899999999999999999999999 9999999864322211111 1  247889999998743            259


Q ss_pred             CEEEEcccCCCcc--ccccChHHHHHHHHHHHHHHHH----HHHHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLG----LAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~----~~~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |+|||+||.....  ......+..+++|+.++..+++    .+++.+ .++|++||.......  ...++.  ....+..
T Consensus       101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~~--~~~~~~~  176 (315)
T PRK06196        101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDDP--HFTRGYD  176 (315)
T ss_pred             CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCcccc--CccCCCC
Confidence            9999999965422  1234567788999998666555    444554 499999997543211  111111  0012333


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      +...|+.+|.+.+.+.+.++..   .++++++++||.+.++........  ..............+ .     ..+..++
T Consensus       177 ~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~-~-----~~~~~~~  248 (315)
T PRK06196        177 KWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE--EQVALGWVDEHGNPI-D-----PGFKTPA  248 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh--hhhhhhhhhhhhhhh-h-----hhcCCHh
Confidence            4567999999999998887664   379999999999998853211000  000000000000000 0     0245679


Q ss_pred             HHHHHHHHHHhCC
Q 019060          249 DMVDGLIRLMEGE  261 (346)
Q Consensus       249 Dva~~i~~~~~~~  261 (346)
                      |+|..++.++..+
T Consensus       249 ~~a~~~~~l~~~~  261 (315)
T PRK06196        249 QGAATQVWAATSP  261 (315)
T ss_pred             HHHHHHHHHhcCC
Confidence            9999999988654

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.76  E-value=2e-16  Score=134.76  Aligned_cols=203  Identities=17%  Similarity=0.127  Sum_probs=138.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------CCCE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------EVDQ  100 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~d~  100 (346)
                      +|+||||||+|+||++++++|+++| ++|+++.|+....          ...+++.+|+.+.+..           ++|+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G-~~v~~~~r~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~   71 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLG-HQVIGIARSAIDD----------FPGELFACDLADIEQTAATLAQINEIHPVDA   71 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEeCCcccc----------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence            5799999999999999999999999 9999999864321          0125778899886432           5899


Q ss_pred             EEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |||++|......    ...+....++.|+.+...+.+++    ++.+. ++|++||...++.+                 
T Consensus        72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------  134 (234)
T PRK07577         72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-----------------  134 (234)
T ss_pred             EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-----------------
Confidence            999999755332    22345667888888887776654    44444 89999998766421                 


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...|.+++.++.+   .+++++++|||.+..+..... ...............+.         ..+...+
T Consensus       135 ~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~---------~~~~~~~  204 (234)
T PRK07577        135 DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQT-RPVGSEEEKRVLASIPM---------RRLGTPE  204 (234)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccc-cccchhHHHHHhhcCCC---------CCCcCHH
Confidence            1256999999999998877654   489999999999987642110 00001111111111111         1244779


Q ss_pred             HHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          249 DMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       249 Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      |+|.+++.++..+.    +..+.+.++.
T Consensus       205 ~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        205 EVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             HHHHHHHHHhCcccCCccceEEEecCCc
Confidence            99999999987642    3356665543

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.75  E-value=2e-16  Score=136.52  Aligned_cols=213  Identities=15%  Similarity=0.053  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|++.| ++|++++|+.........+... ...+..+.+|+.+.+..            .
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G-~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYG-AEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            36799999999999999999999999 9999999864322222112111 23467788999986432            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||++|......    ...++...+++|+.++..+++++..    .+ .++|++||.....                
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------  150 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL----------------  150 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc----------------
Confidence            899999998643221    2345667889999998888877654    33 3899999975421                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|.+.+.+++.++.+   .++++++++||.+..+........  ..+.......  .+       ...+.
T Consensus       151 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~~~--~p-------~~~~~  219 (254)
T PRK08085        151 GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFTAWLCKR--TP-------AARWG  219 (254)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHHHHHHhc--CC-------CCCCc
Confidence            1122356999999999999988765   379999999999988743211000  1111111111  11       12466


Q ss_pred             cHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+|++++++.++....   .| ...+.++
T Consensus       220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        220 DPQELIGAAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            88999999999887543   33 4555444

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=6.7e-17  Score=138.20  Aligned_cols=193  Identities=13%  Similarity=0.038  Sum_probs=136.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      +++++||||+|+||.+++++|++.| +.|++++|+.....+....... ..++.++.+|+.+...            .++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEG-VNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            5789999999999999999999999 8999999864322211111111 2357788999988753            269


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ...+....++.|+.++.++++++..    .+. ++|++||...+..                
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------  149 (239)
T PRK07666         86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKG----------------  149 (239)
T ss_pred             cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccC----------------
Confidence            99999998654321    2234467789999998888887753    333 7999999765432                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|.+.+.+++.++.+   .+++++++|||.+..+....        .   ....      .   ....++.
T Consensus       150 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~--------~---~~~~------~---~~~~~~~  209 (239)
T PRK07666        150 AAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD--------L---GLTD------G---NPDKVMQ  209 (239)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh--------c---cccc------c---CCCCCCC
Confidence            223356999999999998877654   47999999999988764210        0   0000      0   1124678


Q ss_pred             HHHHHHHHHHHHhCC
Q 019060          247 VSDMVDGLIRLMEGE  261 (346)
Q Consensus       247 v~Dva~~i~~~~~~~  261 (346)
                      .+|+|+.++.++..+
T Consensus       210 ~~~~a~~~~~~l~~~  224 (239)
T PRK07666        210 PEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            899999999999865

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1e-16  Score=138.23  Aligned_cols=213  Identities=15%  Similarity=0.080  Sum_probs=139.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC-CCCcchhhhhcC-CCCeeEEecccCCccc-------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIG-HPRFELIRHDVTEPLL-------------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-------------   95 (346)
                      ++|+++||||+|+||++++++|.+.| +.|.++.+.. ....+...+... ...+..+.+|+.+.+.             
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDG-ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            36899999999999999999999999 9988875322 111111111111 1245677888887421             


Q ss_pred             -----CCCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           96 -----IEVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                           .++|++||+||.......    .+..+..+++|+.++..+++++...   ..++|++||...+.           
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  150 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------  150 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc-----------
Confidence                 159999999996532222    2235677889999999988876543   23899999987653           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|...+.+.+.++.+.   ++++.++.||.+.++........   .........  .      ..
T Consensus       151 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~---~~~~~~~~~--~------~~  214 (252)
T PRK12747        151 -----SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD---PMMKQYATT--I------SA  214 (252)
T ss_pred             -----CCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC---HHHHHHHHh--c------Cc
Confidence                 12223579999999999999887654   79999999999988742110000   011111110  0      01


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ...+..++|+|++++.++....   .| .+.+.++
T Consensus       215 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        215 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             ccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCC
Confidence            1246789999999999886543   33 4555544

>PRK08589 short chain dehydrogenase; Validated

Probab=99.75  E-value=1.1e-16  Score=139.51  Aligned_cols=218  Identities=16%  Similarity=0.096  Sum_probs=140.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||+++++.|+++| +.|++++|+ ........+... ..++..+.+|+.+....            +
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G-~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEG-AYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            36799999999999999999999999 999999986 222222222211 23578899999987432            4


Q ss_pred             CCEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||.... ..    ..+.....+++|+.+...+++++    ++.+.++|++||...+..               
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  147 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAA---------------  147 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCC---------------
Confidence            8999999997532 11    12345667788988887766654    334458999999875531               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ......|+.+|...+.+++.++.+.   +++++.+.||.+..+.........-..+...........   .  ....+.
T Consensus       148 -~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~  221 (272)
T PRK08589        148 -DLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM---T--PLGRLG  221 (272)
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc---C--CCCCCc
Confidence             1123569999999999999887654   699999999998766321100000000000000000000   0  111356


Q ss_pred             cHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      .++|+|++++.++....   .| .+.+.++
T Consensus       222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        222 KPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            88999999999887543   33 4555544

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.75  E-value=7.7e-17  Score=138.00  Aligned_cols=194  Identities=13%  Similarity=0.073  Sum_probs=136.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++||||+|+||+.++++|+++| ++|++++|+...... +.....  ..++.++.+|+++.+..            +
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAG-WDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999 899999986432211 111111  23678899999987532            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||++|......    ..++....+.+|+.++..+++.+    ++.+. ++|++||...+..               
T Consensus        84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  148 (241)
T PRK07454         84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNA---------------  148 (241)
T ss_pred             CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcC---------------
Confidence            899999998654322    22345667888999888877665    33433 8999999887642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ..+...|+.+|...+.+.+.++.+   .+++++++||+.+-.+....  ..              ..   .......++
T Consensus       149 -~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~--~~--------------~~---~~~~~~~~~  208 (241)
T PRK07454        149 -FPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT--ET--------------VQ---ADFDRSAML  208 (241)
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc--cc--------------cc---cccccccCC
Confidence             222356999999999998877643   48999999999987764210  00              00   000012357


Q ss_pred             cHHHHHHHHHHHHhCCC
Q 019060          246 YVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~  262 (346)
                      ..+|+|++++.++..+.
T Consensus       209 ~~~~va~~~~~l~~~~~  225 (241)
T PRK07454        209 SPEQVAQTILHLAQLPP  225 (241)
T ss_pred             CHHHHHHHHHHHHcCCc
Confidence            89999999999998765

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.9e-16  Score=136.68  Aligned_cols=214  Identities=15%  Similarity=0.068  Sum_probs=143.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|.+.| ++|++++|+...........+.  ..++.++.+|+.+.+..            
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAG-ADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999999864322122221111  23577889999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+..              
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------  151 (254)
T PRK06114         86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIV--------------  151 (254)
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCC--------------
Confidence            4899999999754322    23456778889999998776654    33333 8999999764321              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      .+..+...|+.+|.+.+.+.+.++.+   .++++.+++||.+..+....  ... ...........++         ..+
T Consensus       152 ~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~--~~~-~~~~~~~~~~~p~---------~r~  219 (254)
T PRK06114        152 NRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR--PEM-VHQTKLFEEQTPM---------QRM  219 (254)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc--ccc-hHHHHHHHhcCCC---------CCC
Confidence            11112356999999999999888764   37899999999998875321  011 1111111111111         135


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..++|++++++.++....    +.++.+.++
T Consensus       220 ~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        220 AKVDEMVGPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             cCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence            678999999999887543    335555554

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.4e-16  Score=136.25  Aligned_cols=190  Identities=14%  Similarity=0.079  Sum_probs=135.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC---------CCCEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI---------EVDQIY  102 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~---------~~d~vi  102 (346)
                      ++++||||+|+||++++++|+++| ++|++++|+..    ...+... ..++.++.+|+++.+..         .+|.+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G-~~V~~~~r~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQG-WQVIACGRNQS----VLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCC-CEEEEEECCHH----HHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEE
Confidence            589999999999999999999999 99999998532    2222111 23578899999987432         379999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      |+||......    ..++....+++|+.++.++++++...   +.++|++||.....                +......
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~~  140 (240)
T PRK06101         77 FNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL----------------ALPRAEA  140 (240)
T ss_pred             EcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc----------------CCCCCch
Confidence            9998543211    22334678899999999999988752   44799999865321                1122346


Q ss_pred             hHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      |+.+|...+.+.+.++.   ..+++++++|||.++++.....                ...   .    ...+..+|+|+
T Consensus       141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~----------------~~~---~----~~~~~~~~~a~  197 (240)
T PRK06101        141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN----------------TFA---M----PMIITVEQASQ  197 (240)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC----------------CCC---C----CcccCHHHHHH
Confidence            99999999999887764   3479999999999998742210                000   0    02468899999


Q ss_pred             HHHHHHhCCCCCcE
Q 019060          253 GLIRLMEGENTGPI  266 (346)
Q Consensus       253 ~i~~~~~~~~~~~~  266 (346)
                      .++..++.....++
T Consensus       198 ~i~~~i~~~~~~~~  211 (240)
T PRK06101        198 EIRAQLARGKSHIY  211 (240)
T ss_pred             HHHHHHhcCCCEEE
Confidence            99999987544433

>PRK12742 oxidoreductase; Provisional

Probab=99.75  E-value=2.5e-16  Score=134.50  Aligned_cols=198  Identities=14%  Similarity=0.084  Sum_probs=134.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi~  103 (346)
                      +++||||||+|+||++++++|++.| ++|+++.|....   ...+.....++..+.+|+.+...        .++|++||
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G-~~v~~~~~~~~~---~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   81 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDG-ANVRFTYAGSKD---AAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVV   81 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCCHH---HHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEE
Confidence            6899999999999999999999999 888877653221   22222112245678899887542        24899999


Q ss_pred             cccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060          104 LACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus       104 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      +||......    ..+++...+++|+.++..++..+...   +.++|++||.....               .+..+...|
T Consensus        82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~~~~~Y  146 (237)
T PRK12742         82 NAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR---------------MPVAGMAAY  146 (237)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc---------------CCCCCCcch
Confidence            998653221    23456788999999999887655442   24899999975421               122334679


Q ss_pred             HHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          177 DEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      +.+|...|.+++.++.+   .++++++++||.+..+....  ..  + ........  .+       ...+...+|++++
T Consensus       147 ~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~--~~--~-~~~~~~~~--~~-------~~~~~~p~~~a~~  212 (237)
T PRK12742        147 AASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPA--NG--P-MKDMMHSF--MA-------IKRHGRPEEVAGM  212 (237)
T ss_pred             HHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccc--cc--H-HHHHHHhc--CC-------CCCCCCHHHHHHH
Confidence            99999999999887665   36999999999997764211  10  1 11111111  11       1135688999999


Q ss_pred             HHHHHhCCC
Q 019060          254 LIRLMEGEN  262 (346)
Q Consensus       254 i~~~~~~~~  262 (346)
                      +..++....
T Consensus       213 ~~~l~s~~~  221 (237)
T PRK12742        213 VAWLAGPEA  221 (237)
T ss_pred             HHHHcCccc
Confidence            999887543

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.3e-16  Score=136.19  Aligned_cols=213  Identities=13%  Similarity=0.054  Sum_probs=140.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +++++||||+|.||.+++++|.++| ++|++++|+.........+... ..++.++.+|+.+.+..            ++
T Consensus         6 ~k~~lItGas~giG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          6 GKVAIITGASSGIGRAAAKLFAREG-AKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999 9999999864322221111111 13577889999986432            58


Q ss_pred             CEEEEcccCCCcc-c----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||..... .    ..++....+++|+.+...+.++    +++.+. ++|++||...+..               
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~---------------  149 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA---------------  149 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc---------------
Confidence            9999999964321 1    2244677889999877766554    444443 8999999865521               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|.+.+.+.+.++.+.   ++++++++||.+-.+........  +... ...... .       ....+.
T Consensus       150 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~-~~~~~~-~-------~~~~~~  218 (254)
T PRK07478        150 GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--PEAL-AFVAGL-H-------ALKRMA  218 (254)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--HHHH-HHHHhc-C-------CCCCCc
Confidence            11223579999999999999887764   68999999999876632110000  1111 111110 0       012356


Q ss_pred             cHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+|+|++++.++..+.   .| .+.+.++
T Consensus       219 ~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        219 QPEEIAQAALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence            78999999999887543   33 4555544

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.75  E-value=1.5e-16  Score=136.63  Aligned_cols=211  Identities=12%  Similarity=0.073  Sum_probs=140.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++||||||+|+||.++++.|++.| ++|+++ .|+............ ....+.++.+|+.+....            
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEG-AKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            45799999999999999999999999 999888 775322111111111 123578899999987532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||++|......    ..+.....+..|+.+..++++++..    .+. ++|++||...+..              
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~--------------  148 (247)
T PRK05565         83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIG--------------  148 (247)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccC--------------
Confidence            5999999998763221    2234567788999998888777653    333 7999999765431              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|...+.+++.++..   .++++++++|+.+..+....    ............  .       ....+
T Consensus       149 --~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~----~~~~~~~~~~~~--~-------~~~~~  213 (247)
T PRK05565        149 --ASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS----FSEEDKEGLAEE--I-------PLGRL  213 (247)
T ss_pred             --CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc----cChHHHHHHHhc--C-------CCCCC
Confidence              112246999999999888877665   37899999999987653211    111111111110  0       11246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+|++++++.++....    +..+++.++
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        214 GKPEEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            688999999999987644    335555554

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.2e-16  Score=137.47  Aligned_cols=196  Identities=14%  Similarity=0.138  Sum_probs=137.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ++++++||||+|+||++++++|+++| +.|++++|+.....+......   ....+.++.+|+++.+..           
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKG-RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999 899999886422211111111   123578899999987432           


Q ss_pred             -CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++||+||.......    .......+++|+.+...+++++.    +.+. ++|++||......             
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------  146 (248)
T PRK08251         80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG-------------  146 (248)
T ss_pred             CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC-------------
Confidence             59999999987543221    23345678899999988887764    3344 8999999764321             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        .+.+...|+.+|...+.+.+.++.+.   ++++++++|+.+.++...            .  .+.          ...
T Consensus       147 --~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~------------~--~~~----------~~~  200 (248)
T PRK08251        147 --LPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA------------K--AKS----------TPF  200 (248)
T ss_pred             --CCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh------------c--ccc----------CCc
Confidence              11123569999999999988877653   688999999998765311            0  000          113


Q ss_pred             cccHHHHHHHHHHHHhCCCCCcE
Q 019060          244 FCYVSDMVDGLIRLMEGENTGPI  266 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~~~~~  266 (346)
                      ++..+|+|+.+++++++....+|
T Consensus       201 ~~~~~~~a~~i~~~~~~~~~~~~  223 (248)
T PRK08251        201 MVDTETGVKALVKAIEKEPGRAA  223 (248)
T ss_pred             cCCHHHHHHHHHHHHhcCCCeEE
Confidence            56789999999999986554443

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.75  E-value=5.8e-17  Score=140.39  Aligned_cols=216  Identities=13%  Similarity=-0.003  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||+|+||++++++|+++| ++|++++|+.....+...++.   ...++.++.+|+++.+..           
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREG-AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999 999999986433222222221   123577899999987432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .+|++||+||......    ..++....+++|+.++..+++++.    +.+. ++|++||...+.              
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  150 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFK--------------  150 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhcc--------------
Confidence             5999999999643221    234566778899999988888764    2333 899999986542              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc--cHHHHHHHHHHcCCCeEEecCCcce
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                        +......|+.+|.+.+.+.+.++.+.   ++++..++||.+-.+.......  .............  .+       .
T Consensus       151 --~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~-------~  219 (260)
T PRK07063        151 --IIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLAL--QP-------M  219 (260)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhc--CC-------C
Confidence              11223469999999999999887764   6899999999886553110000  0000011111110  11       1


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ..+...+|+|++++.++....   .| .+.+.++.
T Consensus       220 ~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        220 KRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             CCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence            135678999999999887543   33 45555543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.75  E-value=2.9e-16  Score=134.88  Aligned_cols=210  Identities=14%  Similarity=0.103  Sum_probs=138.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC-CcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++.++||||+|+||++++++|+++| +.|+++.+.... .......... ...+..+.+|+.+....            +
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDG-FKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcC-CEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999 888876543211 1111111111 22466778999986432            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ...++...+++|+.++..+.+++    ++.+. ++|++||.....                
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------  145 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK----------------  145 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccC----------------
Confidence            899999998754211    23456778899999877765544    44554 899999975431                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++++   .++++++++|+.+.++....    ..+..+.......+         ...+.
T Consensus       146 ~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~~~---------~~~~~  212 (246)
T PRK12938        146 GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA----IRPDVLEKIVATIP---------VRRLG  212 (246)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh----cChHHHHHHHhcCC---------ccCCc
Confidence            1123356999999999988877654   47899999999998775221    11222222222111         12355


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..+|+++++..++....    +..+.+.++
T Consensus       213 ~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        213 SPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            78999999998886543    334555543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.74  E-value=4.5e-16  Score=132.72  Aligned_cols=205  Identities=15%  Similarity=0.105  Sum_probs=141.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-c-----cCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-L-----LIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~-----~~~~d~vi~~  104 (346)
                      ++++++||||+|+||++++++|+++| ++|++++|+....        ...++.++.+|+.+. +     ..++|+|||+
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQG-AQVYGVDKQDKPD--------LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCC-CEEEEEeCCcccc--------cCCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            46899999999999999999999999 9999998854221        023577889998875 1     2268999999


Q ss_pred             ccCCCc-----cccccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060          105 ACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus       105 a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      ||....     ....++....+++|+.++.++++++..    .+ .++|++||...+..                .....
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~~~  138 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVA----------------GGGGA  138 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC----------------CCCCc
Confidence            985421     112345677889999999999887753    23 38999999875421                11224


Q ss_pred             chHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      .|+.+|...+.+.+.++.+.   ++++++++|+.+..+.......  -...........+         ...+...+|+|
T Consensus       139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~a  207 (235)
T PRK06550        139 AYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE--PGGLADWVARETP---------IKRWAEPEEVA  207 (235)
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC--chHHHHHHhccCC---------cCCCCCHHHHH
Confidence            69999999999988877654   7999999999998775321100  0111111111111         12467889999


Q ss_pred             HHHHHHHhCCC---CC-cEEecCC
Q 019060          252 DGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       252 ~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ++++.++....   .| .+.+.++
T Consensus       208 ~~~~~l~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        208 ELTLFLASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             HHHHHHcChhhccCCCcEEEECCc
Confidence            99999986543   33 4555444

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.74  E-value=2.3e-16  Score=129.01  Aligned_cols=201  Identities=15%  Similarity=0.072  Sum_probs=141.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      +|.++|||||+.||.+++++|.+.| ++|++..|...... .+...+....+..+..|++|.+..            ++|
T Consensus         6 ~kv~lITGASSGiG~A~A~~l~~~G-~~vvl~aRR~drL~-~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           6 GKVALITGASSGIGEATARALAEAG-AKVVLAARREERLE-ALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CcEEEEecCcchHHHHHHHHHHHCC-CeEEEEeccHHHHH-HHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            5789999999999999999999999 99999998542222 222222223578899999998542            599


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      ++|||||......    ..++++.++++|+.+..+..++.    .+.+. ++|.+||.+..                .+.
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------------~~y  147 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------------YPY  147 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------------ccC
Confidence            9999999765422    33578899999999999988765    33333 99999998742                122


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|+....+.+.++.+.   +++++.+-||.+-..........--........            ....++..
T Consensus       148 ~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y------------~~~~~l~p  215 (246)
T COG4221         148 PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY------------KGGTALTP  215 (246)
T ss_pred             CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh------------ccCCCCCH
Confidence            334679999999999988887764   688999999877432110000000001111111            12357788


Q ss_pred             HHHHHHHHHHHhCCC
Q 019060          248 SDMVDGLIRLMEGEN  262 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~  262 (346)
                      +|+|+.++.++++|.
T Consensus       216 ~dIA~~V~~~~~~P~  230 (246)
T COG4221         216 EDIAEAVLFAATQPQ  230 (246)
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999999999886

>PRK07069 short chain dehydrogenase; Validated

Probab=99.74  E-value=1e-16  Score=138.09  Aligned_cols=202  Identities=15%  Similarity=0.083  Sum_probs=133.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccC------------C
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +|+||||+|+||+++++.|+++| ++|++++|+.....+.+...+.    ...+..+.+|+.+.+..            +
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQG-AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG   79 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            48999999999999999999999 9999999863222222222111    11234578899886532            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHH----HHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVI----GTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~----~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..++....+++|+.    ++..++.++++.+. ++|++||...+..               
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~---------------  144 (251)
T PRK07069         80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKA---------------  144 (251)
T ss_pred             ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccC---------------
Confidence            899999998754322    12344566778887    67777778877654 8999999877642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccH-HHHHHHHHHcCCCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       ......|+.+|...+.+++.++.+.     +++++.++|+.+.++......... ..........+.         ...
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~  214 (251)
T PRK07069        145 -EPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV---------PLG  214 (251)
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC---------CCC
Confidence             1223469999999999999887653     378899999999887532100000 001111111111         112


Q ss_pred             ecccHHHHHHHHHHHHhCC
Q 019060          243 SFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~  261 (346)
                      .+.+++|++++++.++..+
T Consensus       215 ~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        215 RLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             CCcCHHHHHHHHHHHcCcc
Confidence            3567899999999987654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.74  E-value=3.6e-16  Score=133.37  Aligned_cols=206  Identities=14%  Similarity=0.077  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |.|++|||||+|+||++++++|+++| ++|++++|+.......+    ...++.++.+|+.+.+..            ++
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   75 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQG-QPVIVSYRTHYPAIDGL----RQAGAQCIQADFSTNAGIMAFIDELKQHTDGL   75 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH----HHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCc
Confidence            46799999999999999999999999 99999998643221111    123467889999986432            49


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |++||+||......    ..++.+..+++|+.++..+.+++..    .+   .++|++||.....               
T Consensus        76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~---------------  140 (236)
T PRK06483         76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK---------------  140 (236)
T ss_pred             cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc---------------
Confidence            99999998643221    2345677888999988776655533    33   3799999875431               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       +......|+.+|...|.+++.++.+.  ++++.+++||.+.-+...   .   ...........++.         -+.
T Consensus       141 -~~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~---~~~~~~~~~~~~~~---------~~~  204 (236)
T PRK06483        141 -GSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---D---AAYRQKALAKSLLK---------IEP  204 (236)
T ss_pred             -CCCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---C---HHHHHHHhccCccc---------cCC
Confidence             11223569999999999999998875  488999999987432110   1   11111222211111         244


Q ss_pred             cHHHHHHHHHHHHhCCC--CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN--TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~--~~~~~~~~~~  272 (346)
                      ..+|+++++..++....  +..+.+.++.
T Consensus       205 ~~~~va~~~~~l~~~~~~~G~~i~vdgg~  233 (236)
T PRK06483        205 GEEEIIDLVDYLLTSCYVTGRSLPVDGGR  233 (236)
T ss_pred             CHHHHHHHHHHHhcCCCcCCcEEEeCccc
Confidence            67999999999886433  3456665543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.8e-16  Score=137.37  Aligned_cols=213  Identities=17%  Similarity=0.154  Sum_probs=141.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++++||||+|+||++++++|+++| +.|++++|+..... .+.+.. ..++.++.+|+.+.+..            .+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAG-ARVAIVDIDADNGA-AVAASL-GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            35899999999999999999999999 99999998642221 122222 23578899999987432            58


Q ss_pred             CEEEEcccCCCcc---ccccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPI---FYKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++||+||.....   ...+++.+.+++|+.++..+++++..    .+.++|++||...+..                ..
T Consensus        82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----------------~~  145 (261)
T PRK08265         82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFA----------------QT  145 (261)
T ss_pred             CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccC----------------CC
Confidence            9999999864322   22345667888999999888876643    2248999999765321                11


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+.   ++++++++||.+..+......... .........  ..      .....+...+
T Consensus       146 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~-~~~~~~~~~--~~------~p~~r~~~p~  216 (261)
T PRK08265        146 GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD-RAKADRVAA--PF------HLLGRVGDPE  216 (261)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc-hhHHHHhhc--cc------CCCCCccCHH
Confidence            23469999999999999887653   789999999987765311000000 000011100  00      0112356789


Q ss_pred             HHHHHHHHHHhCCC---C-CcEEecCC
Q 019060          249 DMVDGLIRLMEGEN---T-GPINIGNP  271 (346)
Q Consensus       249 Dva~~i~~~~~~~~---~-~~~~~~~~  271 (346)
                      |+|++++.++....   . ..+.+.++
T Consensus       217 dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        217 EVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             HHHHHHHHHcCccccCccCcEEEECCC
Confidence            99999999987543   3 35666554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.74  E-value=1.8e-16  Score=135.41  Aligned_cols=206  Identities=16%  Similarity=0.147  Sum_probs=139.1

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------CCCE
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------EVDQ  100 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~~d~  100 (346)
                      |||||++|+||++++++|+++| ++|++++|+.............  ...+.++.+|+++....            .+|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEG-AKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999 9999998864222111111111  12477899999987532            4899


Q ss_pred             EEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeccc-ccCCCCCCCCCCCCcCCCCCC
Q 019060          101 IYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSE-VYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       101 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~-v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |||++|.....    .....+...+..|+.++..+++++..    .+. +||++||.. +++.                 
T Consensus        80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~-----------------  142 (239)
T TIGR01830        80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN-----------------  142 (239)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-----------------
Confidence            99999975321    12245677888999999999988764    233 899999965 4432                 


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|.+.+.+.+.++++   .++.+++++|+.+.++...    ..............+.         ..+.++
T Consensus       143 ~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~----~~~~~~~~~~~~~~~~---------~~~~~~  209 (239)
T TIGR01830       143 AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD----KLSEKVKKKILSQIPL---------GRFGTP  209 (239)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh----hcChHHHHHHHhcCCc---------CCCcCH
Confidence            11246999999999988877654   4789999999988665321    1111112222211111         135678


Q ss_pred             HHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          248 SDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +|++++++.++....    +..|++.++
T Consensus       210 ~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       210 EEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999998885432    457877653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.74  E-value=3.1e-16  Score=135.68  Aligned_cols=211  Identities=12%  Similarity=0.123  Sum_probs=143.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||..++++|++.| +.|+++.|+.  ..+...+...  ...+.++.+|+.+.+..            
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAG-ADIIITTHGT--NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCc--HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999998862  2222222221  23578899999986532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||++|......    ...+.+..++.|+.+...+.+++.    +.+. ++|++||...+..              
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  156 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQG--------------  156 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccC--------------
Confidence            5899999998754322    223566778899999877776554    3333 8999999876531              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|.+.|.+++.++++.   ++++++++||.+..+........  ..........  ++       ...+
T Consensus       157 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~--~~-------~~~~  223 (258)
T PRK06935        157 --GKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNRNDEILKR--IP-------AGRW  223 (258)
T ss_pred             --CCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHHHHHHHhc--CC-------CCCC
Confidence              1223469999999999999887754   78999999999887642110000  1111111111  11       1246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+|++..++.++....    +.++.+.++
T Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        224 GEPDDLMGAAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             CCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            778999999999887543    335666554

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.74  E-value=3.9e-16  Score=134.56  Aligned_cols=212  Identities=19%  Similarity=0.165  Sum_probs=140.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||.+++++|++.| +.|++++|+.........+... ...+.++.+|+.+....            .
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQG-AHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 8999999854222211111111 12467889999886432            4


Q ss_pred             CCEEEEcccCCCc-----cccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-----IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||....     ....++....++.|+.+...+++++    ++.+. ++|++||...+.               
T Consensus        86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---------------  150 (252)
T PRK07035         86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVS---------------  150 (252)
T ss_pred             CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcC---------------
Confidence            8999999985421     1122345678889999988877665    33333 899999875432               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|.+.|.+++.++.+.   +++++.+.||.+..+........  ...........+         ...+
T Consensus       151 -~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~  218 (252)
T PRK07035        151 -PGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN--DAILKQALAHIP---------LRRH  218 (252)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC--HHHHHHHHccCC---------CCCc
Confidence             22234579999999999999887654   78999999998876532111010  111111111111         1135


Q ss_pred             ccHHHHHHHHHHHHhCCC---CC-cEEecC
Q 019060          245 CYVSDMVDGLIRLMEGEN---TG-PINIGN  270 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~---~~-~~~~~~  270 (346)
                      ...+|+|+.++.++.+..   .| .+.+.+
T Consensus       219 ~~~~~va~~~~~l~~~~~~~~~g~~~~~dg  248 (252)
T PRK07035        219 AEPSEMAGAVLYLASDASSYTTGECLNVDG  248 (252)
T ss_pred             CCHHHHHHHHHHHhCccccCccCCEEEeCC
Confidence            678999999999887653   33 455544

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2e-16  Score=136.86  Aligned_cols=201  Identities=16%  Similarity=0.096  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++|+||||+|+||++++++|.+.| +.|+++.|+..... .+...+  ...++.++.+|+.+.+..            
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G-~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAG-AKVVLASRRVERLK-ELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999 89999998642211 111111  123578899999886432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----c---------CCeEEEEecccccCCCCCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V---------GARILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~---------~~r~i~~SS~~v~~~~~~~~~  159 (346)
                      ++|++||++|......    ...++...++.|+.++..+++++..    .         +.++|++||...+.       
T Consensus        86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~-------  158 (258)
T PRK06949         86 TIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLR-------  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccC-------
Confidence            5899999998654322    1245667788999999888877642    1         13899999987652       


Q ss_pred             CCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEec
Q 019060          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
                               +......|+.+|...+.+++.++.+   .++++++++||.++++.....   +.........  +.++   
T Consensus       159 ---------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~---~~~~~~~~~~--~~~~---  221 (258)
T PRK06949        159 ---------VLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHH---WETEQGQKLV--SMLP---  221 (258)
T ss_pred             ---------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhc---cChHHHHHHH--hcCC---
Confidence                     2223356999999999999888765   379999999999998753211   0111111111  1111   


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                          ...+...+|++++++.++...
T Consensus       222 ----~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        222 ----RKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             ----CCCCcCHHHHHHHHHHHhChh
Confidence                123556799999999988754

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.74  E-value=1.8e-16  Score=136.53  Aligned_cols=210  Identities=11%  Similarity=0.055  Sum_probs=141.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|.||++++++|+++| ++|++++|...   +.......  ..++.++.+|+++.+..            
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G-~~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAG-ADIVGVGVAEA---PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEecCchH---HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 99998887432   11111111  23577899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ..+++...+++|+.++..+.+++.    +.+  .++|++||...+..             
T Consensus        83 ~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-------------  149 (251)
T PRK12481         83 HIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQG-------------  149 (251)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCC-------------
Confidence            5899999999754322    234567788999998888777653    232  48999999876532             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                         ......|+.+|.+.+.+.+.++.+   .++++..++||.+-.+.......  ...........  ++.       ..
T Consensus       150 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~--~p~-------~~  215 (251)
T PRK12481        150 ---GIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA--DTARNEAILER--IPA-------SR  215 (251)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc--ChHHHHHHHhc--CCC-------CC
Confidence               111246999999999999988765   47999999999987653211000  01111111111  111       13


Q ss_pred             cccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      +...+|+|++++.++....   .| .+.+.++
T Consensus       216 ~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        216 WGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            5688999999999987533   33 4555443

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2e-16  Score=135.66  Aligned_cols=190  Identities=13%  Similarity=0.107  Sum_probs=134.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC---------CCCE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI---------EVDQ  100 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~---------~~d~  100 (346)
                      +|+|+||||+|+||.+++++|+++| ++|++++|+............  ...++.++.+|+.+....         ++|+
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G-~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~   79 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAG-ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDI   79 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCE
Confidence            4689999999999999999999999 999999986532222111111  124688999999987432         4799


Q ss_pred             EEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +||++|......    ..+++...++.|+.++..+++++..    .+. ++|++||......                ..
T Consensus        80 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~  143 (243)
T PRK07102         80 VLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------------RA  143 (243)
T ss_pred             EEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------------CC
Confidence            999998644322    2233456788999999998887653    343 8999999753211                11


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+   .++++++++|+.++++...                +...    .   ...++.++
T Consensus       144 ~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~----------------~~~~----~---~~~~~~~~  200 (243)
T PRK07102        144 SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTA----------------GLKL----P---GPLTAQPE  200 (243)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhh----------------ccCC----C---ccccCCHH
Confidence            2246999999999998887653   4789999999999876311                0000    0   11356789


Q ss_pred             HHHHHHHHHHhCC
Q 019060          249 DMVDGLIRLMEGE  261 (346)
Q Consensus       249 Dva~~i~~~~~~~  261 (346)
                      |+++.++.+++++
T Consensus       201 ~~a~~i~~~~~~~  213 (243)
T PRK07102        201 EVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999865

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.5e-16  Score=138.55  Aligned_cols=194  Identities=13%  Similarity=0.065  Sum_probs=134.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++|+||||+|+||++++++|+++| ++|++++|+.....+....... ...+.++.+|+.+.+..            +
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G-~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRG-ATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999999 9999999864221111111111 13467889999986432            6


Q ss_pred             CCEEEEcccCCCcccc------ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           98 VDQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      +|++||+||.......      ..+....+++|+.+...+++++    ++.+. ++|++||.+++..             
T Consensus       118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  184 (293)
T PRK05866        118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE-------------  184 (293)
T ss_pred             CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC-------------
Confidence            8999999987543221      1334567889999888877755    34444 8999999766531             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +......|+.+|.+.+.+++.++.+.   ++++++++||.+-.+....            ..     .  ..   ...
T Consensus       185 --~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~------------~~-----~--~~---~~~  240 (293)
T PRK05866        185 --ASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP------------TK-----A--YD---GLP  240 (293)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc------------cc-----c--cc---CCC
Confidence              11123569999999999988876653   7899999998776553110            00     0  00   012


Q ss_pred             cccHHHHHHHHHHHHhCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~  262 (346)
                      .+..+++|+.++.+++++.
T Consensus       241 ~~~pe~vA~~~~~~~~~~~  259 (293)
T PRK05866        241 ALTADEAAEWMVTAARTRP  259 (293)
T ss_pred             CCCHHHHHHHHHHHHhcCC
Confidence            4688999999999998653

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.74  E-value=2.8e-16  Score=135.54  Aligned_cols=211  Identities=15%  Similarity=0.044  Sum_probs=142.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+..... .....+.  ..++..+.+|+.+.+..            
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAG-AQVAIAARHLDALE-KLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHH-HHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999 99999988643222 2222111  13577889999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ..++....+++|+.+...+++++..    .+  .++|++||....-.             
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------------  152 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII-------------  152 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC-------------
Confidence            6999999999754322    2234566778999999888887642    22  37899988753210             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       ........|+.+|.+.+.+.+.++.+.   ++++..++||.+-.+....    . ...........  +       ...
T Consensus       153 -~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~----~-~~~~~~~~~~~--~-------~~r  217 (253)
T PRK05867        153 -NVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP----Y-TEYQPLWEPKI--P-------LGR  217 (253)
T ss_pred             -CCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc----c-hHHHHHHHhcC--C-------CCC
Confidence             011122469999999999999887653   7999999999997764221    1 11111111111  1       123


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +...+|+|++++.++....    +..+.+.+|
T Consensus       218 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        218 LGRPEELAGLYLYLASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             CcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence            6788999999999987543    345666554

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.73  E-value=4.3e-16  Score=134.20  Aligned_cols=194  Identities=13%  Similarity=0.081  Sum_probs=133.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC-Ccchhhhhc--CCCCeeEEecccCCccc-----------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG-SKDNLRKWI--GHPRFELIRHDVTEPLL-----------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~-~~~~~~~~~--~~~~~~~~~~d~~~~~~-----------~   96 (346)
                      ..++||||||+|+||++++++|+++|.+.|+++.|+... ..+...+..  ...++.++.+|+.+...           .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            467999999999999999999999853899999986543 222222221  12368899999988643           2


Q ss_pred             CCCEEEEcccCCCccc-cccCh---HHHHHHHHHHHHH----HHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF-YKYNP---VKTIKTNVIGTLN----MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-~~~~~---~~~~~~n~~~~~~----l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||++|...... ...+.   .+.+++|+.+...    ++..+++.+. ++|++||...+.               
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~---------------  151 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGER---------------  151 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcC---------------
Confidence            5999999998754321 11122   2457889887776    5566666654 899999986432               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHH---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|.+...+.+.++.   ..++++++++||.+..+...            .   ...     .    ...
T Consensus       152 -~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~------------~---~~~-----~----~~~  206 (253)
T PRK07904        152 -VRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSA------------H---AKE-----A----PLT  206 (253)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhc------------c---CCC-----C----CCC
Confidence             112234699999999977666543   35899999999998865210            0   000     0    124


Q ss_pred             ccHHHHHHHHHHHHhCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGENTG  264 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~~~  264 (346)
                      +..+|+|+.++.++.++...
T Consensus       207 ~~~~~~A~~i~~~~~~~~~~  226 (253)
T PRK07904        207 VDKEDVAKLAVTAVAKGKEL  226 (253)
T ss_pred             CCHHHHHHHHHHHHHcCCCE
Confidence            68899999999999866543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.73  E-value=3.8e-16  Score=133.72  Aligned_cols=209  Identities=14%  Similarity=0.075  Sum_probs=138.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCccc------------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      +++|||||+|+||++++++|+++| ++|+++.|..+...+......  ...++.++.+|+.+...            ..+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDG-YRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            579999999999999999999999 999888873211111111111  12357889999998643            248


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||++|......    ...++...+..|+.++..+++.    +++.+. ++|++||.....                +
T Consensus        80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~----------------~  143 (242)
T TIGR01829        80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQK----------------G  143 (242)
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------C
Confidence            99999998654321    2234566778899887775544    455554 899999975431                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+++.++.+   .+++++.++|+.+.++....    ..+..+.......++         ..+..
T Consensus       144 ~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~~~~~~~~~~~~---------~~~~~  210 (242)
T TIGR01829       144 QFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA----MREDVLNSIVAQIPV---------GRLGR  210 (242)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc----cchHHHHHHHhcCCC---------CCCcC
Confidence            112356999999999888877654   37999999999998875321    112233222222111         12456


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+|+++++..++..+.    +..+.+.++
T Consensus       211 ~~~~a~~~~~l~~~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       211 PEEIAAAVAFLASEEAGYITGATLSINGG  239 (242)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            7899999988776543    446666665

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.73  E-value=4.1e-16  Score=133.77  Aligned_cols=208  Identities=13%  Similarity=0.075  Sum_probs=138.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~d   99 (346)
                      ++++|||||+|+||++++++|+++| +.|.+..|+...... +.... ..++.++.+|+.+.+.            .++|
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g-~~v~~~~~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQG-AIVGLHGTRVEKLEA-LAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHH-HHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999 888887774322111 11111 2357888999998643            2589


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||......    ...++...++.|+.+...+++++..    .+ .++|++||...+..                .
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~  146 (245)
T PRK12936         83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG----------------N  146 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC----------------C
Confidence            9999998654221    2345677889999998888877642    23 38999999754321                0


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+.+.++.+   .++++++++|+.+..+....    .... ....... ..       ....+...
T Consensus       147 ~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~----~~~~-~~~~~~~-~~-------~~~~~~~~  213 (245)
T PRK12936        147 PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK----LNDK-QKEAIMG-AI-------PMKRMGTG  213 (245)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc----cChH-HHHHHhc-CC-------CCCCCcCH
Confidence            11246999999988888776654   37899999999876543211    0011 1111111 11       11235678


Q ss_pred             HHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          248 SDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +|+++++..++....    +..+++.++
T Consensus       214 ~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        214 AEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             HHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            999999998886543    346777765

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.73  E-value=7.5e-16  Score=133.10  Aligned_cols=204  Identities=13%  Similarity=0.053  Sum_probs=139.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|+|+||||+|+||++++++|+++| +.|+++.|+.........+... ..++.++.+|+.+....            .
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAG-AHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999 9999999864221111111111 23578899999986432            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||++|......    ...+....+..|+.++..+++++.+    .+. ++|++||...+..               
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------  153 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVA---------------  153 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccC---------------
Confidence            799999999654322    2234567788999999888866543    444 8999999765421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ......|+.+|.+.+.+.+.++.+   .++++..++|+.+.++.......  ...+...... . .+       ...++
T Consensus       154 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~--~~~~~~~~~~-~-~~-------~~~~~  221 (256)
T PRK06124        154 -RAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA--DPAVGPWLAQ-R-TP-------LGRWG  221 (256)
T ss_pred             -CCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc--ChHHHHHHHh-c-CC-------CCCCC
Confidence             112256999999999998877655   37999999999999875211000  0111111111 1 11       12478


Q ss_pred             cHHHHHHHHHHHHhCCC
Q 019060          246 YVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~  262 (346)
                      +++|++++++.++..+.
T Consensus       222 ~~~~~a~~~~~l~~~~~  238 (256)
T PRK06124        222 RPEEIAGAAVFLASPAA  238 (256)
T ss_pred             CHHHHHHHHHHHcCccc
Confidence            99999999999997653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.73  E-value=3.1e-16  Score=132.00  Aligned_cols=199  Identities=14%  Similarity=0.142  Sum_probs=142.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++++|||||+.||.+++++|.++| +.|+++.|+.....+-..++..  .-.++++.+|++++...           
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g-~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRG-YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            346799999999999999999999999 9999999965332222222221  23578899999997432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .+|++|||||......    .++.....+++|+.+...+..+.    .+.+. ++|.++|.+.|-              
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~--------------  148 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLI--------------  148 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcC--------------
Confidence             5999999999876543    33455678899988877776554    44444 899999998763              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        |..-...|+.||...-.+.+.+..+   +++.++.+.||.+.-.+.+ .             .+.....   .....-
T Consensus       149 --p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-------------~~~~~~~---~~~~~~  209 (265)
T COG0300         149 --PTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-------------KGSDVYL---LSPGEL  209 (265)
T ss_pred             --CCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-------------ccccccc---ccchhh
Confidence              3333367999999998887777665   4789999999887765421 0             1111111   011245


Q ss_pred             cccHHHHHHHHHHHHhCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~  262 (346)
                      ++..+|+|+.++..+.+..
T Consensus       210 ~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         210 VLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             ccCHHHHHHHHHHHHhcCC
Confidence            8899999999999998754

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.73  E-value=6.8e-16  Score=119.56  Aligned_cols=194  Identities=15%  Similarity=0.149  Sum_probs=137.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~  107 (346)
                      |||.|+||||.+|+.|+++++++| |+|+++.|+..+...       .+++..++.|+.++..     .+.|+||..-+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RG-HeVTAivRn~~K~~~-------~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~   72 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRG-HEVTAIVRNASKLAA-------RQGVTILQKDIFDLTSLASDLAGHDAVISAFGA   72 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCC-CeeEEEEeChHhccc-------cccceeecccccChhhhHhhhcCCceEEEeccC
Confidence            799999999999999999999999 999999997543322       1467888999998765     379999987654


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccc-cCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      ..     .+..   .........+++.++..++ |++.++.++. |-.+.       -...+.|..|...|..++..+|.
T Consensus        73 ~~-----~~~~---~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-------~rLvD~p~fP~ey~~~A~~~ae~  137 (211)
T COG2910          73 GA-----SDND---ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-------TRLVDTPDFPAEYKPEALAQAEF  137 (211)
T ss_pred             CC-----CChh---HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-------ceeecCCCCchhHHHHHHHHHHH
Confidence            31     1111   2233446678888888888 9998887654 32222       11111466676778888888875


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      + +.+....+++|+.+-|+..|-|+....+.+         +.+..+.....+   -+.|+..|.|-+++..++++.
T Consensus       138 L-~~Lr~~~~l~WTfvSPaa~f~PGerTg~yr---------lggD~ll~n~~G---~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         138 L-DSLRAEKSLDWTFVSPAAFFEPGERTGNYR---------LGGDQLLVNAKG---ESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             H-HHHhhccCcceEEeCcHHhcCCccccCceE---------eccceEEEcCCC---ceeeeHHHHHHHHHHHHhccc
Confidence            4 444455569999999999999976543221         223334432223   378999999999999999886

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.2e-16  Score=133.77  Aligned_cols=212  Identities=12%  Similarity=0.072  Sum_probs=140.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +|+++||||+|+||+++++.|+++| +.|++++|+..... .....+.  ..++.++.+|+++.+..            .
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G-~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEG-ANVVITGRTKEKLE-EAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999 89999998643221 1211111  23678899999986432            5


Q ss_pred             CCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||++|.....    ...+++...+++|+.++.++++++..    .+  .++|++||...+.               
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~---------------  143 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD---------------  143 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc---------------
Confidence            89999999854321    12334577899999999999988742    22  3799999885431               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       +......|+.+|...+.+.+.++.+    .++++..++||.+..+...... ..-....+.+....+         ...
T Consensus       144 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~  212 (252)
T PRK07677        144 -AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WESEEAAKRTIQSVP---------LGR  212 (252)
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccc-cCCHHHHHHHhccCC---------CCC
Confidence             1112246999999999999887665    3689999999998853211000 000122222222111         113


Q ss_pred             cccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      +...+|+++++..++....   .| .+.+.++
T Consensus       213 ~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  244 (252)
T PRK07677        213 LGTPEEIAGLAYFLLSDEAAYINGTCITMDGG  244 (252)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCCEEEECCC
Confidence            6678999999988886542   33 4555554

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.7e-16  Score=134.38  Aligned_cols=215  Identities=16%  Similarity=0.111  Sum_probs=141.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++||||+|+||++++++|+++| ++|++++|+.. ..+....... ..++.++.+|+.+....            .
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G-~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHG-ANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999999 99999988642 1111111111 23577899999986432            5


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||.......    ..+.+..++.|+.++..+++++..    .+ .++|++||.....               .
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------~  147 (263)
T PRK08226         83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM---------------V  147 (263)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------c
Confidence            8999999997543222    233455788999999988887653    23 3899999865311               0


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC----CccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID----DGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                      +......|+.+|...|.+.+.++.+.   +++++.++||.+.++.....    ........+.....+.+.         
T Consensus       148 ~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------  218 (263)
T PRK08226        148 ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL---------  218 (263)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC---------
Confidence            11223569999999999999887764   68999999999987632100    000011122222222111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+..++|+|+++..++....   .| .+.+.++
T Consensus       219 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        219 RRLADPLEVGELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             CCCCCHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence            135688999999988876432   34 4455444

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.6e-16  Score=133.65  Aligned_cols=215  Identities=17%  Similarity=0.091  Sum_probs=142.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++|+||||+|+||.+++++|++.| ++|++++|+............. ..++.++.+|+.+....            +
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREG-AKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999999 9999999864322211111111 23578899999986432            4


Q ss_pred             CCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||++|......     ..+++...+++|+.+...+++++    .+.+. ++|++||...+..              
T Consensus        85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~--------------  150 (253)
T PRK06172         85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA--------------  150 (253)
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC--------------
Confidence            799999998643211     23456677889999887766543    33443 8999999876542              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|.+.+.+.+.++.+.   ++++.++.||.+-.+........ .+..........  +       ...+
T Consensus       151 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~--~-------~~~~  218 (253)
T PRK06172        151 --APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA-DPRKAEFAAAMH--P-------VGRI  218 (253)
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc-ChHHHHHHhccC--C-------CCCc
Confidence              2233569999999999999887764   68999999998866532110000 011111111111  1       1235


Q ss_pred             ccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ...+|+++.++.++....   .| .+.+.++.
T Consensus       219 ~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        219 GKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            678999999999987543   34 45665543

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.72  E-value=7.6e-16  Score=133.77  Aligned_cols=215  Identities=13%  Similarity=0.023  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++||||+|+||.+++++|+++| +.|+++.|+.....+....+.. ..++.++.+|+++....            .
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G-~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAG-ATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999999999 9999988754322222212111 12578899999987432            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..++....+++|+.+...+.+++.    +.+ .++|++||.....                
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  151 (265)
T PRK07097         88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL----------------  151 (265)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC----------------
Confidence            899999999765322    234566777899998887776654    333 3899999964321                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc----cHHHHHHHHHHcCCCeEEecCCcce
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG----RVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                      +..+...|+.+|...+.+.+.++.+.   +++++.++||.+..+.......    .....+........+         .
T Consensus       152 ~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~  222 (265)
T PRK07097        152 GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP---------A  222 (265)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC---------c
Confidence            11223569999999999999988764   7999999999998874321000    000001111111110         1


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+...+|+|+.++.++....   .| .+.+.++
T Consensus       223 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  256 (265)
T PRK07097        223 ARWGDPEDLAGPAVFLASDASNFVNGHILYVDGG  256 (265)
T ss_pred             cCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            135678999999999987643   33 4555554

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.9e-16  Score=134.07  Aligned_cols=195  Identities=19%  Similarity=0.094  Sum_probs=134.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------------CCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------------~~~d   99 (346)
                      +++|||||||+||+.++++|+++| ++|++++|+..... .+.......++.++.+|+.+...             .++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEG-WRVGAYDINEAGLA-ALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            689999999999999999999999 99999998543211 11121223468899999998532             2579


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccc-cCCCCCCCCCCCCcCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEV-YGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|||+||......    ..++.+..+++|+.++..+++++.    ..+ .++|++||... ++.                
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------------  143 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ----------------  143 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC----------------
Confidence            9999999754322    224567788999999999988764    333 48999999754 331                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                       .....|+.+|...+.+.+.++.+   .++++++++|+.+..+.......    ........           ...-.+.
T Consensus       144 -~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~----~~~~~~~~-----------~~~~~~~  207 (260)
T PRK08267        144 -PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSN----EVDAGSTK-----------RLGVRLT  207 (260)
T ss_pred             -CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccc----hhhhhhHh-----------hccCCCC
Confidence             11246999999999999888754   36899999999887543211000    00000000           0011356


Q ss_pred             HHHHHHHHHHHHhCC
Q 019060          247 VSDMVDGLIRLMEGE  261 (346)
Q Consensus       247 v~Dva~~i~~~~~~~  261 (346)
                      .+|+|++++.+++..
T Consensus       208 ~~~va~~~~~~~~~~  222 (260)
T PRK08267        208 PEDVAEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            699999999999754

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.72  E-value=7.8e-16  Score=132.91  Aligned_cols=210  Identities=17%  Similarity=0.116  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++|+||||+|+||.+++++|+++| ++|++++|+..... ......   ...++.+|+.+....            ++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G-~~v~~~~r~~~~~~-~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEG-ATVVVGDIDPEAGK-AAADEV---GGLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHH-HHHHHc---CCcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999988542211 111111   235788999886432            58


Q ss_pred             CEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeccc-ccCCCCCCCCCCCCcCC
Q 019060           99 DQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSE-VYGDPLVHPQDESYWGN  166 (346)
Q Consensus        99 d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~-v~~~~~~~~~~e~~~~~  166 (346)
                      |+|||+||...+..      ........+++|+.++..+++.+.    +.+ .++|++||.. +++.             
T Consensus        81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~-------------  147 (255)
T PRK06057         81 DIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS-------------  147 (255)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCC-------------
Confidence            99999998653211      123356778899998877776553    333 3899998864 4432             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                         ..+...|+.+|...+.+.+.++.+   .++++++++||.+.++......... ........    ..+ .    ...
T Consensus       148 ---~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~-~~~~~~~~----~~~-~----~~~  214 (255)
T PRK06057        148 ---ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKD-PERAARRL----VHV-P----MGR  214 (255)
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCC-HHHHHHHH----hcC-C----CCC
Confidence               112346999998888777765443   3799999999999887532110000 01111111    011 0    125


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +..++|+++++..++....    +..+.+.++
T Consensus       215 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        215 FAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            7889999999988886532    334555543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=1.4e-15  Score=132.68  Aligned_cols=217  Identities=20%  Similarity=0.214  Sum_probs=154.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~a~~  107 (346)
                      |+||||||||++|++++++|+++| ++|+++.|+..    ....+.  ..++...+|+.+....     +.|.++++.+.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~-~~v~~~~r~~~----~~~~~~--~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~   73 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARG-HEVRAAVRNPE----AAAALA--GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGL   73 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCC-CEEEEEEeCHH----HHHhhc--CCcEEEEeccCCHhHHHHHhccccEEEEEecc
Confidence            689999999999999999999999 99999999542    222222  5789999999998654     79999988754


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      .. .    .. ...........+..+++. .++ +++++|....-                 . .....|..+|..+|..
T Consensus        74 ~~-~----~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~-----------------~-~~~~~~~~~~~~~e~~  128 (275)
T COG0702          74 LD-G----SD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD-----------------A-ASPSALARAKAAVEAA  128 (275)
T ss_pred             cc-c----cc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC-----------------C-CCccHHHHHHHHHHHH
Confidence            32 1    11 122233333444444444 234 67777776542                 1 2225699999999999


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--CC
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~  264 (346)
                      +..    .+++++++|+..+|....     ..+  .......+.+.....  ....+++.++|++.++...+..+.  .+
T Consensus       129 l~~----sg~~~t~lr~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~--~~~~~~i~~~d~a~~~~~~l~~~~~~~~  195 (275)
T COG0702         129 LRS----SGIPYTTLRRAAFYLGAG-----AAF--IEAAEAAGLPVIPRG--IGRLSPIAVDDVAEALAAALDAPATAGR  195 (275)
T ss_pred             HHh----cCCCeEEEecCeeeeccc-----hhH--HHHHHhhCCceecCC--CCceeeeEHHHHHHHHHHHhcCCcccCc
Confidence            854    589999999777665431     111  222223344333333  337899999999999999998764  77


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceE
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEIT  294 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~  294 (346)
                      +|.+.+++..+..++.+.+.+..|++..+.
T Consensus       196 ~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~  225 (275)
T COG0702         196 TYELAGPEALTLAELASGLDYTIGRPVGLI  225 (275)
T ss_pred             EEEccCCceecHHHHHHHHHHHhCCcceee
Confidence            999999999999999999999999987763

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4.9e-16  Score=137.02  Aligned_cols=207  Identities=17%  Similarity=0.102  Sum_probs=139.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      .++++|||||+|.||..+++.|.+.| ++|++++|+................+..+.+|+++.+.            ..+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARG-AKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999998543222111111112345566799998643            258


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+|||+||......    ..++..+.+++|+.++..+++++..    .+.++|++||...+..                .
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------------~  150 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAA----------------A  150 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCC----------------C
Confidence            99999999754322    2234567789999999999887743    2348999999876532                1


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+.+.++.+   .++.++++.||.+..+........  ...........+.+       ...++..
T Consensus       151 ~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~--~~~~~~~~~~~~~p-------~~~~~~~  221 (296)
T PRK05872        151 PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD--LPAFRELRARLPWP-------LRRTTSV  221 (296)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc--chhHHHHHhhCCCc-------ccCCCCH
Confidence            22356999999999998887644   478999999998876532111000  01111111111111       1246789


Q ss_pred             HHHHHHHHHHHhCCCC
Q 019060          248 SDMVDGLIRLMEGENT  263 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~~  263 (346)
                      +|+|++++.++.....
T Consensus       222 ~~va~~i~~~~~~~~~  237 (296)
T PRK05872        222 EKCAAAFVDGIERRAR  237 (296)
T ss_pred             HHHHHHHHHHHhcCCC
Confidence            9999999999986543

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.5e-16  Score=138.73  Aligned_cols=205  Identities=11%  Similarity=0.094  Sum_probs=138.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +++|+||||+|+||++++++|++.| ++|+++.|+.....+...+... ..++.++.+|++|.+..            .+
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G-~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRG-AKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            5789999999999999999999999 9999999864222211111111 23577889999987432            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHH----HHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..++....+++|+.+...+    +..+++.+. ++|++||...+..                
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~----------------  150 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS----------------  150 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC----------------
Confidence            99999998653222    2234566778887766654    444555543 8999999887642                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ......|+.+|...+.+.+.++.+.     ++.+++++|+.+..|...        . ........       ......+
T Consensus       151 ~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~--------~-~~~~~~~~-------~~~~~~~  214 (334)
T PRK07109        151 IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD--------W-ARSRLPVE-------PQPVPPI  214 (334)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh--------h-hhhhcccc-------ccCCCCC
Confidence            1223569999999999888776542     588999999988776311        1 11111110       0112246


Q ss_pred             ccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          245 CYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      ..++|+|++++.++.++ ...+++.+
T Consensus       215 ~~pe~vA~~i~~~~~~~-~~~~~vg~  239 (334)
T PRK07109        215 YQPEVVADAILYAAEHP-RRELWVGG  239 (334)
T ss_pred             CCHHHHHHHHHHHHhCC-CcEEEeCc
Confidence            78999999999999876 33455543

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.72  E-value=1.4e-15  Score=131.72  Aligned_cols=213  Identities=14%  Similarity=0.060  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|.||++++++|++.| +.|+++.|+...........+.  ..++.++.+|+.+....            
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G-~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEK-AKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 8888887743222222221111  23567889999986432            


Q ss_pred             CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHH----HHHHHHcC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNM----LGLAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l----~~~~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      .+|++||+||.......    .++....+++|+.+...+    +..+++.+  .++|++||...+               
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~---------------  149 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ---------------  149 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc---------------
Confidence            58999999997543222    234556788998776654    44455544  389999996543               


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       .+..+...|+.+|.+.+.+.+.++.+.   ++++++++||.+..+........  +..........+         ...
T Consensus       150 -~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~  217 (261)
T PRK08936        150 -IPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD--PKQRADVESMIP---------MGY  217 (261)
T ss_pred             -CCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC--HHHHHHHHhcCC---------CCC
Confidence             122334579999999988888776553   79999999999987742211000  111111111111         123


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCc-EEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TGP-INIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~~-~~~~~~  271 (346)
                      +...+|+++.+..++....   .|. +.+.++
T Consensus       218 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        218 IGKPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence            6678999999999887543   443 444443

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.72  E-value=5.5e-16  Score=134.35  Aligned_cols=219  Identities=14%  Similarity=0.081  Sum_probs=142.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------~   97 (346)
                      .++++|||||+|.||++++++|+++| ++|++++|+.............  ..++.++.+|+++.+..           +
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAG-ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            46789999999999999999999999 9999999864322211111111  23678899999987432           4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..++....+++|+.+...+.++    +++.+ .++|++||...+.                
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~----------------  149 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKE----------------  149 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccC----------------
Confidence            899999998654322    2345677788897776665554    44444 3899999987542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-------ccHHHHHHHHHHcCCCeEEecCC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-------GRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..+.||.+..+......       ............  ..++     
T Consensus       150 ~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-----  222 (263)
T PRK08339        150 PIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA--KPIP-----  222 (263)
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh--ccCC-----
Confidence            11223469999999999999887764   689999999988665210000       000011111111  1111     


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---C-CcEEecCCCCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---T-GPINIGNPGEFT  275 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~-~~~~~~~~~~~s  275 (346)
                        ...+...+|+|++++.++....   . ..+.+.++..+|
T Consensus       223 --~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        223 --LGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             --cccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence              1246778999999999886543   3 356666655444

>TIGR02415 23BDH acetoin reductases

Probab=99.72  E-value=2.9e-16  Score=135.51  Aligned_cols=213  Identities=17%  Similarity=0.095  Sum_probs=137.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      ++++||||+|+||.+++++|++.| +.|+++.|+............. ...+.++.+|+.+....            .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDG-FAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999 8999998853221111111111 23578899999986532            489


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|||++|......    ...+....+++|+.++..+++++.    +.+  .++|++||......                
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------  143 (254)
T TIGR02415        80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG----------------  143 (254)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC----------------
Confidence            9999998653221    224456778999998887766553    333  38999999764321                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe------cCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ------APGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  240 (346)
                      ......|+.+|.+.+.+++.++.+.   ++.+++++|+.+..+...        .+.............      .....
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (254)
T TIGR02415       144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE--------EIDEETSEIAGKPIGEGFEEFSSEIA  215 (254)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh--------hhhhhhhhcccCchHHHHHHHHhhCC
Confidence            1123569999999999998877664   688999999988655311        110000000000000      00001


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---CCcEEecC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---TGPINIGN  270 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~  270 (346)
                      ...+..++|+++++..++....   .|.+...+
T Consensus       216 ~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d  248 (254)
T TIGR02415       216 LGRPSEPEDVAGLVSFLASEDSDYITGQSILVD  248 (254)
T ss_pred             CCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence            1237788999999999998754   45554443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.72  E-value=3e-16  Score=136.11  Aligned_cols=213  Identities=15%  Similarity=0.160  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++|||||+|+||++++++|++.| +.|++++|+............. ..++.++.+|+++....            +
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAG-ANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999 9999999864322211111111 13467889999986422            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++||+||......    ..+++...+++|+.++.++++++..    .+.++|++||...+.                +
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~----------------~  150 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFV----------------P  150 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhcc----------------C
Confidence            899999997543211    2234566788999999999887753    234899999976532                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHH-HHHHHHHcCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-NFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ......|+.+|...|.+++.++.+   .+++++.++|+.+.+....   ....+ ......... ..+       ...+.
T Consensus       151 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~---~~~~~~~~~~~~~~~-~~~-------~~~~~  219 (264)
T PRK07576        151 MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGM---ARLAPSPELQAAVAQ-SVP-------LKRNG  219 (264)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHH---hhcccCHHHHHHHHh-cCC-------CCCCC
Confidence            222356999999999999988765   3688999999988753210   00000 001111111 111       12466


Q ss_pred             cHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+|+|++++.++..+.   .| .+.+.++
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~G~~~~~~gg  249 (264)
T PRK07576        220 TKQDIANAALFLASDMASYITGVVLPVDGG  249 (264)
T ss_pred             CHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence            78999999999997533   44 4455544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.72  E-value=2.2e-15  Score=131.46  Aligned_cols=156  Identities=13%  Similarity=0.042  Sum_probs=116.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~d~  100 (346)
                      |++|||||+|+||++++++|++.| ++|++++|+..    ...... ..++.++.+|+.+.+.            .++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~----~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAG-YEVWATARKAE----DVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999 99999998532    122211 2357788999988543            25899


Q ss_pred             EEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |||+||......    ..++....+++|+.++..+++++..    ...++|++||...+..                ...
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~  139 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLV----------------TPF  139 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCC----------------CCC
Confidence            999999654322    2245667889999999888887633    2247999998764321                112


Q ss_pred             CCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~  210 (346)
                      ...|+.+|...+.+.+.++.+   .++++++++||.+..+.
T Consensus       140 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~  180 (274)
T PRK05693        140 AGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF  180 (274)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence            356999999999998877654   58999999999997653

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.72  E-value=1.2e-15  Score=131.55  Aligned_cols=202  Identities=12%  Similarity=0.064  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|.||.+++++|.+.| +.|+++++...  .+....... ...+..+.+|+.+.+..            +
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G-~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   85 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAG-CDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGH   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            36899999999999999999999999 99988876432  111112111 23577889999986332            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||......    ..+++.+.+++|+.++..+++++..    .+  .++|++||...+..              
T Consensus        86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  151 (253)
T PRK08993         86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQG--------------  151 (253)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccC--------------
Confidence            999999999754322    2345778899999999988887643    22  38999999876642              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|.+.|.+.+.++.+   .++++..++||.+-.+........  .........  .++.       ..+
T Consensus       152 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--~~~~~~~~~--~~p~-------~r~  218 (253)
T PRK08993        152 --GIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--EQRSAEILD--RIPA-------GRW  218 (253)
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--hHHHHHHHh--cCCC-------CCC
Confidence              111246999999999999888766   478999999999976532100000  011111111  1111       136


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~  262 (346)
                      ...+|+|+.++.++....
T Consensus       219 ~~p~eva~~~~~l~s~~~  236 (253)
T PRK08993        219 GLPSDLMGPVVFLASSAS  236 (253)
T ss_pred             cCHHHHHHHHHHHhCccc
Confidence            678999999999987643

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.71  E-value=7.4e-16  Score=131.73  Aligned_cols=192  Identities=16%  Similarity=0.130  Sum_probs=132.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcc--------------c
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPL--------------L   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~--------------~   95 (346)
                      +++|+||||+|+||++++++|+++| +.|++++|+.........+..  ....+.++.+|+.+..              .
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~   84 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAG-ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT   84 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcC-CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence            5799999999999999999999999 999999986532222111111  1234567788876531              1


Q ss_pred             -CCCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCc
Q 019060           96 -IEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       .++|+|||+||.....     ...++....+++|+.++..+++++..    .+ .++|++||....             
T Consensus        85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-------------  151 (239)
T PRK08703         85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-------------  151 (239)
T ss_pred             CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc-------------
Confidence             2589999999864321     12234556789999998888776643    33 389999986432             


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                         .+......|+.+|...+.+++.++.+.    ++++++++||.+++|.....            ..+.         .
T Consensus       152 ---~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~------------~~~~---------~  207 (239)
T PRK08703        152 ---TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS------------HPGE---------A  207 (239)
T ss_pred             ---cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc------------CCCC---------C
Confidence               122233569999999999999887764    58899999999998742100            0010         1


Q ss_pred             eeecccHHHHHHHHHHHHhCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ...+...+|++..++.++...
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~  228 (239)
T PRK08703        208 KSERKSYGDVLPAFVWWASAE  228 (239)
T ss_pred             ccccCCHHHHHHHHHHHhCcc
Confidence            113468899999999988743

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=6.6e-16  Score=131.94  Aligned_cols=197  Identities=12%  Similarity=0.020  Sum_probs=133.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++|+||||+|+||.++++.|++.| ++|++++|+...............++.++.+|+.+....            ++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEG-AQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            35799999999999999999999999 999999986422211111111223578899999986422            47


Q ss_pred             CEEEEcccCCCcc--ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           99 DQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        99 d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      |.+||+++.....  ...++....++.|+.+...+++.+...   +.++|++||......               +..+.
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------~~~~~  147 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK---------------ASPDQ  147 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc---------------CCCCc
Confidence            9999999754321  111344566788888887777766542   347999998754211               11233


Q ss_pred             CchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      ..|+.+|...+.+++.++.+.   +++++++||++++++...   .    .....      ..   .  ....++..+|+
T Consensus       148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~---~----~~~~~------~~---~--~~~~~~~~~~v  209 (238)
T PRK05786        148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEP---E----RNWKK------LR---K--LGDDMAPPEDF  209 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCc---h----hhhhh------hc---c--ccCCCCCHHHH
Confidence            569999999999888877654   899999999999987411   0    00000      00   0  01135678999


Q ss_pred             HHHHHHHHhCC
Q 019060          251 VDGLIRLMEGE  261 (346)
Q Consensus       251 a~~i~~~~~~~  261 (346)
                      +++++.++..+
T Consensus       210 a~~~~~~~~~~  220 (238)
T PRK05786        210 AKVIIWLLTDE  220 (238)
T ss_pred             HHHHHHHhccc
Confidence            99999998753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=1.8e-15  Score=130.70  Aligned_cols=208  Identities=16%  Similarity=0.124  Sum_probs=139.8

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCC--------Ccch--hhhhcC--CCCeeEEecccCCccc-
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDN--LRKWIG--HPRFELIRHDVTEPLL-   95 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~~~--~~~~~~--~~~~~~~~~d~~~~~~-   95 (346)
                      ++++||||||||  .||.+++++|+++| +.|++++|+...        ....  +.....  ..++.++.+|+.+... 
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G-~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKG-IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcC-CcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            457899999996  79999999999999 899999886211        0110  111111  1357889999998643 


Q ss_pred             -----------CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCC
Q 019060           96 -----------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPL  155 (346)
Q Consensus        96 -----------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~  155 (346)
                                 ..+|+|||+||......    ...+++..+.+|+.++..+++++...    + .++|++||...++   
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---  159 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLG---  159 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccC---
Confidence                       25899999998653322    22345677899999999999887532    2 3899999987653   


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
                                   +......|+.+|.+.|.+++.++.+   .+++++.++||.+..+...       ...........+ 
T Consensus       160 -------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~-------~~~~~~~~~~~~-  218 (256)
T PRK12748        160 -------------PMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT-------EELKHHLVPKFP-  218 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC-------hhHHHhhhccCC-
Confidence                         2222356999999999998887665   3789999999987765321       111111111100 


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                              ...+...+|+|+.+..++....    +..+++.++
T Consensus       219 --------~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        219 --------QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             --------CCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence                    0124467999999998886533    335566554

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.71  E-value=1.3e-15  Score=132.43  Aligned_cols=209  Identities=16%  Similarity=0.077  Sum_probs=135.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C--CCCeeEEecccCCccc--------------
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G--HPRFELIRHDVTEPLL--------------   95 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~d~~~~~~--------------   95 (346)
                      ..++||||+|+||++++++|+++| +.|+++.|........+...+ .  ...+.++.+|++|.+.              
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEG-YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCC-CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            479999999999999999999999 899887664322222221111 1  1245578999999742              


Q ss_pred             --CCCCEEEEcccCCCccccc----c-----------ChHHHHHHHHHHHHHHHHHHHHcC-----------CeEEEEec
Q 019060           96 --IEVDQIYHLACPASPIFYK----Y-----------NPVKTIKTNVIGTLNMLGLAKRVG-----------ARILLTST  147 (346)
Q Consensus        96 --~~~d~vi~~a~~~~~~~~~----~-----------~~~~~~~~n~~~~~~l~~~~~~~~-----------~r~i~~SS  147 (346)
                        .++|+|||+||...+....    .           .....+++|+.+...+++++....           .++|++||
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence              2599999999965432111    1           245678999999988887653211           25777777


Q ss_pred             ccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHH
Q 019060          148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA  224 (346)
Q Consensus       148 ~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~  224 (346)
                      ....                .+..+...|+.+|...+.+.+.++.+   .++++++++||.+..+...   .   .....
T Consensus       161 ~~~~----------------~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~---~---~~~~~  218 (267)
T TIGR02685       161 AMTD----------------QPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM---P---FEVQE  218 (267)
T ss_pred             hhcc----------------CCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc---c---hhHHH
Confidence            6432                12233457999999999999988776   4799999999998755311   1   11111


Q ss_pred             HHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          225 QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ......++   .     ..+...+|++++++.++....   .| .+.+.++.
T Consensus       219 ~~~~~~~~---~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       219 DYRRKVPL---G-----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             HHHHhCCC---C-----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            11111111   0     134688999999999887543   33 45555544

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.71  E-value=8.3e-16  Score=133.36  Aligned_cols=200  Identities=13%  Similarity=0.072  Sum_probs=136.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----------CCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~d   99 (346)
                      .++++|||||+|+||.+++++|+++| ++|++++|+.........+.....++.++.+|+.+...           ..+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAG-ARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            36799999999999999999999999 99999998642222111111112367889999998753           2589


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|||+||......    ...+....+++|+.++..+++++..    .+ .++|++||...+..                .
T Consensus        83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~  146 (263)
T PRK09072         83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG----------------Y  146 (263)
T ss_pred             EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC----------------C
Confidence            9999998754322    2234567788999999998887753    23 37888888654321                1


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+++.++.+   .+++++++.|+.+..+...        ....      ...    ......+..+
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~--------~~~~------~~~----~~~~~~~~~~  208 (263)
T PRK09072        147 PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNS--------EAVQ------ALN----RALGNAMDDP  208 (263)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchh--------hhcc------ccc----ccccCCCCCH
Confidence            12256999999999988887765   3688899999877654311        0000      000    0001146788


Q ss_pred             HHHHHHHHHHHhCCCCCc
Q 019060          248 SDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~~~~  265 (346)
                      +|+|+.++.++++...+.
T Consensus       209 ~~va~~i~~~~~~~~~~~  226 (263)
T PRK09072        209 EDVAAAVLQAIEKERAER  226 (263)
T ss_pred             HHHHHHHHHHHhCCCCEE
Confidence            999999999999765443

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.71  E-value=1.3e-15  Score=134.81  Aligned_cols=199  Identities=15%  Similarity=0.010  Sum_probs=131.6

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C-CCCeeEEecccCCccc----------
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G-HPRFELIRHDVTEPLL----------   95 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~d~~~~~~----------   95 (346)
                      ....+++++||||+|+||++++++|+++| +.|++.++......+.....+ . ..++.++.+|+.+.+.          
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~G-a~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLG-ATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            34457899999999999999999999999 899988875322222222111 1 2357789999998532          


Q ss_pred             -CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----c--------CCeEEEEecccccCCCCCCC
Q 019060           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V--------GARILLTSTSEVYGDPLVHP  158 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~--------~~r~i~~SS~~v~~~~~~~~  158 (346)
                       .++|++||+||......    ...++...+++|+.++..+++++..    .        ..++|++||...+..     
T Consensus        87 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----  161 (306)
T PRK07792         87 LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVG-----  161 (306)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccC-----
Confidence             25899999999754321    2345677889999999999887631    1        138999999765421     


Q ss_pred             CCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe
Q 019060          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
                                 ......|+.+|...+.+.+.++.+   +++++..+.|+.  ...       +....+    ......  
T Consensus       162 -----------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~-------~~~~~~----~~~~~~--  215 (306)
T PRK07792        162 -----------PVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTA-------MTADVF----GDAPDV--  215 (306)
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCc-------hhhhhc----cccchh--
Confidence                       112246999999999999887765   478888888852  111       101110    000000  


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                        ......++.++|++.+++.++..
T Consensus       216 --~~~~~~~~~pe~va~~v~~L~s~  238 (306)
T PRK07792        216 --EAGGIDPLSPEHVVPLVQFLASP  238 (306)
T ss_pred             --hhhccCCCCHHHHHHHHHHHcCc
Confidence              00112456889999999988864

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.71  E-value=3.1e-16  Score=139.04  Aligned_cols=176  Identities=16%  Similarity=0.086  Sum_probs=119.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++|+||||+|+||++++++|+++| ++|++++|+.....+......   ....+.++.+|+.+....           
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G-~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKG-AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            46899999999999999999999999 999999986432222111111   123578899999987432           


Q ss_pred             -CCCEEEEcccCCCccc--cccChHHHHHHHHHH----HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 -EVDQIYHLACPASPIF--YKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                       ++|+|||+||...+..  ..+.....+++|+.+    +..++..+++.+. ++|++||...+.... .+.++..+  ..
T Consensus        94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~--~~  170 (306)
T PRK06197         94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQW--ER  170 (306)
T ss_pred             CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCc--cc
Confidence             5899999999654322  234566778899988    5556666666554 999999987442111 11111111  02


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEE--EEeccccCCC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRI--ARIFNTYGPR  210 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i--vR~~~i~G~~  210 (346)
                      +..+...|+.+|.+.+.+.+.++.+.   ++++++  +.||.+..+.
T Consensus       171 ~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~  217 (306)
T PRK06197        171 RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL  217 (306)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence            33445679999999999999887764   455544  4688887653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.71  E-value=1.3e-15  Score=131.96  Aligned_cols=213  Identities=14%  Similarity=0.063  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|++.| +.|+++.|......+.....+   ...++.++.+|+++.+..           
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSG-VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 898887664322212211111   123578899999986432           


Q ss_pred             -CCCEEEEcccCCCc------cc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASP------IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 -~~d~vi~~a~~~~~------~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~  160 (346)
                       ++|++||+||....      ..    ........+++|+.+...+.+.+    ++.+. ++|++||...+.        
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------  157 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--------  157 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--------
Confidence             58999999985421      11    12344566777877766655443    33333 899999975331        


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                              +......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+..... .. ............+      
T Consensus       158 --------~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~-~~-~~~~~~~~~~~~~------  221 (260)
T PRK08416        158 --------YIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF-TN-YEEVKAKTEELSP------  221 (260)
T ss_pred             --------CCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc-cC-CHHHHHHHHhcCC------
Confidence                    11122469999999999999988764   79999999988765421100 00 0111111111111      


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                         ...+..++|+|.+++.++....   .| .+.+.++
T Consensus       222 ---~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        222 ---LNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             ---CCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence               1136688999999999887543   33 4555444

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.70  E-value=8.9e-16  Score=133.41  Aligned_cols=209  Identities=18%  Similarity=0.172  Sum_probs=139.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....        ..++.++.+|+.+....            .+
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G-~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANG-ANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999988543211        23577899999987432            58


Q ss_pred             CEEEEcccCCCcc-------------ccccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCC
Q 019060           99 DQIYHLACPASPI-------------FYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        99 d~vi~~a~~~~~~-------------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~~~~~~  160 (346)
                      |+|||+||.....             ...++.+..+++|+.++..+++++...    + .++|++||...+..       
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------  151 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEG-------  151 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCC-------
Confidence            9999999964321             122345678899999999998877542    2 37999999875421       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccC-CCCCCCCcc--------HHHHHHHHHHc
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYG-PRMNIDDGR--------VVSNFIAQAIR  228 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G-~~~~~~~~~--------~~~~~~~~~~~  228 (346)
                               ......|+.+|...+.+++.++.+   .++++.+++||.+.. +........        ...........
T Consensus       152 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (266)
T PRK06171        152 ---------SEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTK  222 (266)
T ss_pred             ---------CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcc
Confidence                     122356999999999999888765   378999999998752 211100000        00111111111


Q ss_pred             CCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       229 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...++       ...+...+|+|++++.++....    +..+++.++
T Consensus       223 ~~~~p-------~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        223 TSTIP-------LGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             ccccc-------CCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            00111       1245678999999999887543    334555544

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.2e-15  Score=136.01  Aligned_cols=199  Identities=13%  Similarity=0.106  Sum_probs=137.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      +++||||||+|.||++++++|.++| ++|+++.|+.....+....... ...+..+.+|+++.+.            .++
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G-~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRG-ARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999 9999999864322211111111 2356778999998643            258


Q ss_pred             CEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||........    ++....+++|+.++.++.+++    ++.+ .++|++||...+..                
T Consensus        86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~----------------  149 (330)
T PRK06139         86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAA----------------  149 (330)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCC----------------
Confidence            9999999965433222    345667899999988877665    3444 38999999775531                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ......|+.+|...+.+.+.++.+    .++.++.+.|+.+..|..... .    .     ..+...      .....++
T Consensus       150 ~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~-~----~-----~~~~~~------~~~~~~~  213 (330)
T PRK06139        150 QPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHG-A----N-----YTGRRL------TPPPPVY  213 (330)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccc-c----c-----cccccc------cCCCCCC
Confidence            112356999999988888777655    268899999999988753211 0    0     001111      0112367


Q ss_pred             cHHHHHHHHHHHHhCCCC
Q 019060          246 YVSDMVDGLIRLMEGENT  263 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~~  263 (346)
                      +.+|+|++++.++.++..
T Consensus       214 ~pe~vA~~il~~~~~~~~  231 (330)
T PRK06139        214 DPRRVAKAVVRLADRPRA  231 (330)
T ss_pred             CHHHHHHHHHHHHhCCCC
Confidence            899999999999987653

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.70  E-value=3.3e-15  Score=130.23  Aligned_cols=198  Identities=13%  Similarity=0.070  Sum_probs=134.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc---hhh---h-hc-CCCCeeEEecccCCcccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLR---K-WI-GHPRFELIRHDVTEPLLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~---~-~~-~~~~~~~~~~d~~~~~~~------   96 (346)
                      .+++++||||+|+||++++++|+++| ++|++++|+......   .+.   . .. ...++.++.+|+++.+..      
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDG-ANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            35799999999999999999999999 999999986532111   011   1 11 123577889999987432      


Q ss_pred             ------CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHH----c-CCeEEEEecccccCCCCCCCCCC
Q 019060           97 ------EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----V-GARILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~-~~r~i~~SS~~v~~~~~~~~~~e  161 (346)
                            ++|+|||+||.......    .++....+++|+.++.++++++..    . +.++|++||......        
T Consensus        84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~--------  155 (273)
T PRK08278         84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP--------  155 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc--------
Confidence                  59999999997543222    234567788999999999998853    2 247888888642210        


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                            ....+...|+.+|.+.|.+++.++.+.   +++++.+.|+.....       .    .......+.        
T Consensus       156 ------~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t-------~----~~~~~~~~~--------  210 (273)
T PRK08278        156 ------KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT-------A----AVRNLLGGD--------  210 (273)
T ss_pred             ------cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc-------H----HHHhccccc--------
Confidence                  011334679999999999999887764   688899998743221       0    111111111        


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      .....+...+|+|+.++.++....
T Consensus       211 ~~~~~~~~p~~va~~~~~l~~~~~  234 (273)
T PRK08278        211 EAMRRSRTPEIMADAAYEILSRPA  234 (273)
T ss_pred             ccccccCCHHHHHHHHHHHhcCcc
Confidence            011246788999999999987643

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.70  E-value=9.4e-16  Score=132.81  Aligned_cols=215  Identities=12%  Similarity=0.064  Sum_probs=142.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++|+||||+|+||+.++++|.+.| ++ |++++|+............. ...+.++.+|+.+....            
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G-~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERG-AAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999 77 88988853222111111111 23567789999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||++|......    ........++.|+.+..++++++..    .+  .++|++||...++.             
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-------------  150 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG-------------  150 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC-------------
Confidence            5899999998654221    2233456788999999998877643    22  27999999877642             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC---CccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                         ......|+.+|...|.+.+.++.+.   +++++.++|+.++++.....   .......++.......         .
T Consensus       151 ---~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~  218 (260)
T PRK06198        151 ---QPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------P  218 (260)
T ss_pred             ---CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC---------C
Confidence               1123569999999999999887654   58899999999988752100   0001112222211111         1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+++++|++++++.++....    +..+.+.++
T Consensus       219 ~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        219 FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            1246789999999999886443    334555543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.70  E-value=1.8e-15  Score=130.94  Aligned_cols=214  Identities=11%  Similarity=0.049  Sum_probs=134.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~d~  100 (346)
                      |++|||||+|.||++++++|+++| +.|++++|+.........+.....++.++.+|+.+.+.            .++|+
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKG-ARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999 99999998643222222222122357789999998643            25999


Q ss_pred             EEEcccCCCcc---ccc---cChHHHHHHHHHHHHHHHH----HHH-HcC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060          101 IYHLACPASPI---FYK---YNPVKTIKTNVIGTLNMLG----LAK-RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus       101 vi~~a~~~~~~---~~~---~~~~~~~~~n~~~~~~l~~----~~~-~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +||+||.....   ..+   .+....+.+|+.+...+..    .+. +.+ .++|++||.....                
T Consensus        80 li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~----------------  143 (259)
T PRK08340         80 LVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKE----------------  143 (259)
T ss_pred             EEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCC----------------
Confidence            99999864311   111   2334445667665544433    332 222 3899999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc-------cHHHH-HHHHHHcCCCeEEecC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG-------RVVSN-FIAQAIRGEPLTVQAP  237 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~  237 (346)
                      +..+...|+.+|...+.+.+.++.+.   ++++..+.||.+-.+.......       ..... ........  .+    
T Consensus       144 ~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p----  217 (259)
T PRK08340        144 PMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER--TP----  217 (259)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc--CC----
Confidence            22233579999999999999988764   5788899998876653210000       00000 00111110  11    


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                         ...+...+|+|++++.++..+.   .| ...+.++.
T Consensus       218 ---~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        218 ---LKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             ---ccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence               1236778999999999987543   44 45555543

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.70  E-value=4.2e-15  Score=128.88  Aligned_cols=202  Identities=16%  Similarity=0.114  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCch-hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCccc-----------
Q 019060           31 SNMRILVTGGAG-FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL-----------   95 (346)
Q Consensus        31 ~~~~ilItG~tG-~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~-----------   95 (346)
                      .+++++||||+| .||+.+++.|+++| +.|++++|+...........   ....++.++.+|+.+.+.           
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEG-ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999997 69999999999999 89999888543222222111   122357889999998632           


Q ss_pred             -CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCc
Q 019060           96 -IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ..+|+|||+||......    ..++....++.|+.+...+++++..    .+  .++|++||...+.            
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------  162 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------  162 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence             25899999999653222    1234566788999998888776543    32  3788888865431            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|.+.+.+.+.++.+   .++++.+++|+.+..+......   ............++         
T Consensus       163 ----~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~---------  226 (262)
T PRK07831        163 ----AQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT---SAELLDELAAREAF---------  226 (262)
T ss_pred             ----CCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc---CHHHHHHHHhcCCC---------
Confidence                1223356999999999999998866   4789999999999887532110   12222222222211         


Q ss_pred             eecccHHHHHHHHHHHHhCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..+...+|+|++++.++...
T Consensus       227 ~r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        227 GRAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             CCCcCHHHHHHHHHHHcCch
Confidence            23567799999999988754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.70  E-value=1.1e-15  Score=132.61  Aligned_cols=213  Identities=16%  Similarity=0.050  Sum_probs=140.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.... +.+.... ..++.++.+|+.+....            ++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEG-ARVAVLERSAEKL-ASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            35799999999999999999999999 9999999854221 1121211 23577889999986432            59


Q ss_pred             CEEEEcccCCCcc-c----ccc----ChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPI-F----YKY----NPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~-~----~~~----~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |++||+||..... .    ..+    .++..+++|+.+...+++++..    .+.++|++||...+..            
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------  149 (263)
T PRK06200         82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYP------------  149 (263)
T ss_pred             CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCC------------
Confidence            9999999964321 1    111    1456678899988888777643    3347999999876531            


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCC----c-c--HHHHHHHHHHcCCCeEEec
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDD----G-R--VVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~----~-~--~~~~~~~~~~~~~~~~~~~  236 (346)
                          ......|+.+|.+.+.+++.++.+.  ++++..+.||.+..+......    . .  ..+....... . ..+   
T Consensus       150 ----~~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p---  220 (263)
T PRK06200        150 ----GGGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA-A-ITP---  220 (263)
T ss_pred             ----CCCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhh-c-CCC---
Confidence                1223469999999999999888764  478999999998765321100    0 0  0011111111 1 111   


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCC-C----CCcEEecCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGE-N----TGPINIGNP  271 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~-~----~~~~~~~~~  271 (346)
                          ...+...+|+|++++.++... .    +..+.+.+|
T Consensus       221 ----~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        221 ----LQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             ----CCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence                124678899999999988755 3    334555554

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.69  E-value=3.4e-16  Score=151.92  Aligned_cols=221  Identities=18%  Similarity=0.163  Sum_probs=140.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++|||||+|+||++++++|++.| +.|++++|+............   ....+..+.+|+++....            
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~G-a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g  492 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEG-AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG  492 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999999 999999986422111111111   223567889999986432            


Q ss_pred             CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~----~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||+||.......    ..+....+++|+.+...+.+.    +++.+  .++|++||...+.              
T Consensus       493 ~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~--------------  558 (676)
T TIGR02632       493 GVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY--------------  558 (676)
T ss_pred             CCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC--------------
Confidence            58999999997543222    234556778888877666543    33433  4899999976432              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEecccc-CCCCCCCCccHHHHHHHHHHcCCCe----EEecCC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRGEPL----TVQAPG  238 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~-G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  238 (346)
                        +......|+.+|.+.+.+++.++.+.   +++++.++|+.++ |.+...  ..+......  ..+...    ..+...
T Consensus       559 --~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~r  632 (676)
T TIGR02632       559 --AGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWD--GEWREERAA--AYGIPADELEEHYAKR  632 (676)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccc--ccchhhhhh--cccCChHHHHHHHHhc
Confidence              11123579999999999999887763   6899999999887 332110  000000000  000000    000011


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .....+++++|+|++++.++....    +..+++.+|..
T Consensus       633 ~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       633 TLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            112356889999999999886432    44677776644

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.69  E-value=3.1e-15  Score=128.82  Aligned_cols=202  Identities=15%  Similarity=0.067  Sum_probs=137.5

Q ss_pred             CCCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..+++++||||+  +.||+.++++|+++| ++|++..|+. ...+...+. ....+..+.+|+++.+..           
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G-~~Vi~~~r~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQG-ATVIYTYQND-RMKKSLQKL-VDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCC-CEEEEecCch-HHHHHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            346899999999  799999999999999 9999988852 222222222 223577899999986432           


Q ss_pred             -CCCEEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||...+.        ...++....+++|+.+...+.+++...   +.++|++||.....            
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------  149 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER------------  149 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc------------
Confidence             599999999975321        122345677889998888887776542   23899999865421            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+   .++++..+.||.+-.+.......  -..........  .+       .
T Consensus       150 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--~~~~~~~~~~~--~p-------~  214 (252)
T PRK06079        150 ----AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--HKDLLKESDSR--TV-------D  214 (252)
T ss_pred             ----cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--hHHHHHHHHhc--Cc-------c
Confidence                1122356999999999999988775   37899999999997653211000  01222222111  11       1


Q ss_pred             eecccHHHHHHHHHHHHhCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..+...+|+|++++.++...
T Consensus       215 ~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        215 GVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             cCCCCHHHHHHHHHHHhCcc
Confidence            13677899999999998754

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.69  E-value=2.9e-15  Score=128.03  Aligned_cols=197  Identities=15%  Similarity=0.067  Sum_probs=134.1

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------CCCE
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------EVDQ  100 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~~d~  100 (346)
                      |+||||+|+||.++++.|.++| ++|++++|............+.  ..++.++.+|+.+....            .+|+
T Consensus         1 vlItGas~giG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADG-FEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999 8998888753222222222111  23588899999987432            4899


Q ss_pred             EEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHH-----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          101 IYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK-----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       101 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +||++|.....    ....++...++.|+.++..+++++.     +.+ .++|++||...+..                .
T Consensus        80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~  143 (239)
T TIGR01831        80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMG----------------N  143 (239)
T ss_pred             EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccC----------------C
Confidence            99999865432    1334567788999999999888652     223 38999999764321                1


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+.+.++.+   .+++++.++|+.+.++....    . ..........-++         ..+...
T Consensus       144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~-~~~~~~~~~~~~~---------~~~~~~  209 (239)
T TIGR01831       144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAE----V-EHDLDEALKTVPM---------NRMGQP  209 (239)
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchh----h-hHHHHHHHhcCCC---------CCCCCH
Confidence            12346999999999888877655   37999999999988764221    1 1112222211111         135577


Q ss_pred             HHHHHHHHHHHhCCC
Q 019060          248 SDMVDGLIRLMEGEN  262 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~  262 (346)
                      +|+++.++.++..+.
T Consensus       210 ~~va~~~~~l~~~~~  224 (239)
T TIGR01831       210 AEVASLAGFLMSDGA  224 (239)
T ss_pred             HHHHHHHHHHcCchh
Confidence            999999999987643

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06484 short chain dehydrogenase; Validated

Probab=99.69  E-value=2.1e-15  Score=143.63  Aligned_cols=212  Identities=17%  Similarity=0.187  Sum_probs=144.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|.||.+++++|+++| +.|++++|+..... .+.+.. ...+..+.+|+.+.+..            .+
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAG-DRLLIIDRDAEGAK-KLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999 99999998532211 122212 13466789999987432            48


Q ss_pred             CEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |++|||||.....     ...++.+..+++|+.++..+++++...   +.++|++||...+.                +.
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  408 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL----------------AL  408 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC----------------CC
Confidence            9999999965321     123456778899999999998877543   23899999987642                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .+...|+.+|...+.+.+.++.+.   ++++++++||.+..+........ -...........++         ..+..+
T Consensus       409 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~  478 (520)
T PRK06484        409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-GRADFDSIRRRIPL---------GRLGDP  478 (520)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-cHHHHHHHHhcCCC---------CCCcCH
Confidence            233579999999999999887664   78999999999987642110000 00111111111111         135678


Q ss_pred             HHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          248 SDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      +|+|++++.++....   .| .+.+.++
T Consensus       479 ~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        479 EEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999999987543   33 5666554

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.69  E-value=8.2e-16  Score=136.57  Aligned_cols=173  Identities=16%  Similarity=0.094  Sum_probs=123.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||+|+||.+++++|+++| +.|++++|+.....+...++.   ....+.++.+|+.+.+..           
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAG-AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 999999986533222222221   123578899999986433           


Q ss_pred             -CCCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEecccccCC-CCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGD-PLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~v~~~-~~~~~~~e~~~~~~  167 (346)
                       .+|++||+||......   ..+..+..+.+|+.+...+.+.+.    +...|+|++||...+.. ....+..+.     
T Consensus        92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~-----  166 (313)
T PRK05854         92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE-----  166 (313)
T ss_pred             CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc-----
Confidence             4999999999764322   335677889999999877766554    33348999999865322 111111111     


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGP  209 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~  209 (346)
                      .+..+...|+.+|.+.+.+.+.++++     .++.+..+.||.+..+
T Consensus       167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~  213 (313)
T PRK05854        167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN  213 (313)
T ss_pred             ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence            23345567999999999999988754     3588999999988654

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.5e-15  Score=131.02  Aligned_cols=202  Identities=14%  Similarity=0.105  Sum_probs=132.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |+++||||+|+||++++++|+++| +.|+++.|+.........+..  ......++.+|+.+.+..            ++
T Consensus         1 k~vlItGas~giG~~la~~la~~G-~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQG-AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999 999998885432211111111  112245578999886432            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----Hc--CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RV--GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||++|......    ..++....+++|+.++..+++++.    +.  +.++|++||...+.                
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~----------------  143 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV----------------  143 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccC----------------
Confidence            99999998653222    234557788999999999998863    22  23899999975431                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc---cHHHHHHHHHHcCCCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG---RVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                      +......|+.+|...+.+.+.++.+   .++++++++||.+.++.......   ............          ....
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~----------~~~~  213 (272)
T PRK07832        144 ALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD----------RFRG  213 (272)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH----------hccc
Confidence            1112346999999888887766543   57999999999998875321000   000000000000          0012


Q ss_pred             ecccHHHHHHHHHHHHhCC
Q 019060          243 SFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..+..+|+|++++.++.++
T Consensus       214 ~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        214 HAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             CCCCHHHHHHHHHHHHhcC
Confidence            3578899999999999643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.68  E-value=2.3e-15  Score=129.70  Aligned_cols=200  Identities=13%  Similarity=0.096  Sum_probs=128.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------------C-
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------------E-   97 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------------~-   97 (346)
                      |+||||||+|+||++++++|+++| ++|++++|...+....+.... ..++.++.+|+++.+..              + 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   79 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKG-THVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNV   79 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcC-CEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccC
Confidence            689999999999999999999999 899999986422111111111 23678899999986432              1 


Q ss_pred             -CCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           98 -VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        98 -~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       .+++||++|...+.     ....+....+++|+.+...+++.    +++.+  .++|++||...+.             
T Consensus        80 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  146 (251)
T PRK06924         80 SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-------------  146 (251)
T ss_pred             CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-------------
Confidence             12789999864331     12234556677788775555544    44432  3899999976542             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCC---CCccHHHHHHHHHHcCCCeEEecC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNI---DDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                         +..+...|+.+|...+.+++.++.+     .++++..++||.+-.+....   .....+. .+......  .     
T Consensus       147 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~--~-----  215 (251)
T PRK06924        147 ---PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFT-NLDRFITL--K-----  215 (251)
T ss_pred             ---CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccch-HHHHHHHH--h-----
Confidence               3334567999999999999988755     35888999998776542110   0000000 01111100  0     


Q ss_pred             CcceeecccHHHHHHHHHHHHhC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                        ....+..++|+|+.++.++..
T Consensus       216 --~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        216 --EEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             --hcCCcCCHHHHHHHHHHHHhc
Confidence              011367889999999999986

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.68  E-value=6.1e-15  Score=128.07  Aligned_cols=217  Identities=13%  Similarity=0.056  Sum_probs=139.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||+|+||++++++|+++| +.|++++|+.............   ..++..+.+|+.+.+..           
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAG-ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 9999999864322221111111   13567889999987432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .+|++||+||......    ..+++...+++|+.+...+++++    ++.+ .++|++||...+..             
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  152 (265)
T PRK07062         86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP-------------  152 (265)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC-------------
Confidence             5899999999654222    12345667788877766665544    4443 38999999865421             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC------ccHHHHHHHHHHcCCCeEEecC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD------GRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                         ......|+.+|...+.+.+.++.+   .+++++.++||.+..+......      ...+..+.........++    
T Consensus       153 ---~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----  225 (265)
T PRK07062        153 ---EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP----  225 (265)
T ss_pred             ---CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC----
Confidence               112246999999999888877665   3789999999988765321000      000011111111111111    


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                         ...+...+|+|++++.++....    +..+.+.++
T Consensus       226 ---~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        226 ---LGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             ---cCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence               1236678999999999887532    335555554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.67  E-value=5.2e-15  Score=127.13  Aligned_cols=193  Identities=18%  Similarity=0.123  Sum_probs=129.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCc--c------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEP--L------------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~--~------------   94 (346)
                      .+++|+||||+|+||.+++++|++.| ++|++++|+.........+..  ...++.++.+|+++.  .            
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHG-ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999 899999986422111111111  123466777787632  1            


Q ss_pred             cCCCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           95 LIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        95 ~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      ...+|+|||+|+.....     .....+...+++|+.++..+++++.    +.+. +||++||......           
T Consensus        90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------  158 (247)
T PRK08945         90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG-----------  158 (247)
T ss_pred             hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCC-----------
Confidence            12589999999864321     1224456788999999888887663    3444 8999999764321           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                           ......|+.+|...|.+++.++.+.   ++++++++|+.+-.+...        .    .....         ..
T Consensus       159 -----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~--------~----~~~~~---------~~  212 (247)
T PRK08945        159 -----RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA--------S----AFPGE---------DP  212 (247)
T ss_pred             -----CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh--------h----hcCcc---------cc
Confidence                 1123469999999999998887665   577888888877654210        0    00000         01


Q ss_pred             eecccHHHHHHHHHHHHhCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..+...+|+++.++.++...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        213 QKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             cCCCCHHHHHHHHHHHhCcc
Confidence            13568899999999988644

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.67  E-value=7.5e-15  Score=128.10  Aligned_cols=226  Identities=14%  Similarity=0.073  Sum_probs=139.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc-----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-----------~~~   98 (346)
                      |++.++|||+ |+||+++++.|. +| ++|++++|+.....+...+... ..++.++.+|+.+.+.           .++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AG-KKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            5678999998 689999999996 78 9999999864322221112111 1257789999998643           259


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCC-----CCC---CCCCCc---
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPL-----VHP---QDESYW---  164 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~-----~~~---~~e~~~---  164 (346)
                      |++||+||...   ...++...+++|+.++.++++++...   +.++|++||........     ...   .+..+.   
T Consensus        78 d~li~nAG~~~---~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (275)
T PRK06940         78 TGLVHTAGVSP---SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSL  154 (275)
T ss_pred             CEEEECCCcCC---chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccc
Confidence            99999998653   23567889999999999999887543   23567777765432110     000   000000   


Q ss_pred             CCCCC---CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          165 GNVNP---IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       165 ~~~~~---~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                      +...+   ..+...|+.+|...+.+.+.++.+.   ++++..+.||.+..+.....................+       
T Consensus       155 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p-------  227 (275)
T PRK06940        155 PFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP-------  227 (275)
T ss_pred             ccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC-------
Confidence            00000   0134579999999999988876653   6899999999987763210000000111111111111       


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                        ...+...+|+|++++.++....   .| .+.+.++
T Consensus       228 --~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        228 --AGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             --cccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence              1236788999999999886432   33 4555554

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.9e-16  Score=131.28  Aligned_cols=157  Identities=17%  Similarity=0.112  Sum_probs=114.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc----------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL----------------   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~----------------   95 (346)
                      +|++|||||+|+||++++++|+++| ++|++++|+...   .... ....++.++.+|+.+.+.                
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G-~~v~~~~r~~~~---~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPG-IAVLGVARSRHP---SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCC-CEEEEEecCcch---hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            4699999999999999999999999 999999886432   1111 112357888999988632                


Q ss_pred             CCCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           96 IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      ..+|++||++|...+..     ..+.+...+++|+.+...+.+.+    .+.+. ++|++||...+.             
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------  142 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN-------------  142 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC-------------
Confidence            14789999998754321     12345677788988866655544    33333 899999987653             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH--hCCceEEEEeccccCC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGP  209 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ivR~~~i~G~  209 (346)
                         +..+...|+.+|...|.+++.++.+  .++++.+++|+.+-.+
T Consensus       143 ---~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~  185 (243)
T PRK07023        143 ---AYAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG  185 (243)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence               2334467999999999999988765  4688999999887544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.66  E-value=9.9e-15  Score=123.31  Aligned_cols=182  Identities=16%  Similarity=0.136  Sum_probs=129.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC----------CCCEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI----------EVDQIY  102 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------~~d~vi  102 (346)
                      ++++||||+|+||++++++|++.| ++|++++|+...    ..+.. ..++.++.+|+.+.+..          ++|+||
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G-~~v~~~~r~~~~----~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADG-WRVIATARDAAA----LAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCC-CEEEEEECCHHH----HHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence            689999999999999999999999 999999886322    11111 13467889999986321          489999


Q ss_pred             EcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEeccc-ccCCCCCCCCCCCCcCCCCCCC
Q 019060          103 HLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSE-VYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       103 ~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~-v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++|.....      ...+++...++.|+.++..+++++..    .+.++|++||.. .++..              +..
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------~~~  141 (222)
T PRK06953         76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA--------------TGT  141 (222)
T ss_pred             ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc--------------cCC
Confidence            999875321      13345678899999999999988764    223788988865 34321              111


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh-CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      +...|+.+|...+.+++.++.+. +++++.++|+.+..+...                        +    ...+..++.
T Consensus       142 ~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------------~----~~~~~~~~~  193 (222)
T PRK06953        142 TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG------------------------A----QAALDPAQS  193 (222)
T ss_pred             CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------------C----CCCCCHHHH
Confidence            12359999999999999887654 678999999888765310                        0    113466888


Q ss_pred             HHHHHHHHhCCC
Q 019060          251 VDGLIRLMEGEN  262 (346)
Q Consensus       251 a~~i~~~~~~~~  262 (346)
                      +..++.++....
T Consensus       194 ~~~~~~~~~~~~  205 (222)
T PRK06953        194 VAGMRRVIAQAT  205 (222)
T ss_pred             HHHHHHHHHhcC
Confidence            888887765433

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.66  E-value=1.1e-15  Score=122.18  Aligned_cols=276  Identities=16%  Similarity=0.084  Sum_probs=174.9

Q ss_pred             CCCEEEEEcCchhHHHHHHH-----HHHhcC---CCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVD-----KLMENE---KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~-----~L~~~g---~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi  102 (346)
                      +..+.++-+++|+|+..|.-     ++-.-+   .|.|++++|.....           ++.+-+.|..-.. ..++..+
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-----------ritw~el~~~Gip-~sc~a~v   78 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-----------RITWPELDFPGIP-ISCVAGV   78 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-----------ccccchhcCCCCc-eehHHHH
Confidence            44567777899999988876     332222   28999999964221           2222222221111 1355555


Q ss_pred             EcccCCC--c--cccccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          103 HLACPAS--P--IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       103 ~~a~~~~--~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      +.+|...  +  .+.+.--.+.....+..+..++++..++..   .+|.+|..++|-......++|+     ++....+.
T Consensus        79 na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~-----~~~qgfd~  153 (315)
T KOG3019|consen   79 NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEK-----IVHQGFDI  153 (315)
T ss_pred             hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccc-----cccCChHH
Confidence            5554211  1  111111122333445567778888887763   4999999999987777778887     56665554


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHH--HHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIA--QAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      ......+.|.......  .+.+.+++|.|.+.|.+.     ..+..++.  ++..|+++   +++++++.|||++|++..
T Consensus       154 ~srL~l~WE~aA~~~~--~~~r~~~iR~GvVlG~gG-----Ga~~~M~lpF~~g~GGPl---GsG~Q~fpWIHv~DL~~l  223 (315)
T KOG3019|consen  154 LSRLCLEWEGAALKAN--KDVRVALIRIGVVLGKGG-----GALAMMILPFQMGAGGPL---GSGQQWFPWIHVDDLVNL  223 (315)
T ss_pred             HHHHHHHHHHHhhccC--cceeEEEEEEeEEEecCC-----cchhhhhhhhhhccCCcC---CCCCeeeeeeehHHHHHH
Confidence            4444444444433222  248899999999999863     33333332  33456665   688999999999999999


Q ss_pred             HHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC---CCCCC--CcccCChHHH----HhhcCCcccc
Q 019060          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVEN---TPDDP--RQRKPDITKA----TELLGWEPKI  323 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~---~~~~~--~~~~~~~~k~----~~~lg~~p~~  323 (346)
                      |..+++++. .|+.|-..+++++..||++.+..+++++..+...+.   ....+  ....++..|.    ...+||+.++
T Consensus       224 i~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~y  303 (315)
T KOG3019|consen  224 IYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKY  303 (315)
T ss_pred             HHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeec
Confidence            999999976 999999999999999999999999998765443221   01111  1122333221    1357998887


Q ss_pred             -cHHhHHHHHH
Q 019060          324 -KLRDGLPLME  333 (346)
Q Consensus       324 -~~~e~i~~~~  333 (346)
                       .+.+++++++
T Consensus       304 p~vk~Al~~i~  314 (315)
T KOG3019|consen  304 PYVKDALRAIM  314 (315)
T ss_pred             hHHHHHHHHHh
Confidence             5677777654

>PRK05855 short chain dehydrogenase; Validated

Probab=99.65  E-value=4.1e-15  Score=143.69  Aligned_cols=162  Identities=15%  Similarity=0.062  Sum_probs=120.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|.++| ++|++++|+.....+....... ..++.++.+|+++.+..            .
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREG-AEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999 9999999864322211111111 23578899999997533            4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||......    ..++....+++|+.++.++.+++    ++.+  .++|++||...+..              
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--------------  458 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAP--------------  458 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC--------------
Confidence            899999999754322    23456677889999999888764    3333  48999999987742              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~  209 (346)
                        ......|+.+|.+.+.+.+.++.+   .++++++++||.+-.+
T Consensus       459 --~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~  501 (582)
T PRK05855        459 --SRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN  501 (582)
T ss_pred             --CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence              223357999999999998887665   3789999999988654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1e-14  Score=121.08  Aligned_cols=179  Identities=21%  Similarity=0.250  Sum_probs=126.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi~~  104 (346)
                      |+++||||+|.||.+++++|.++  +.|++++|+..                .+.+|+.+.+..        ++|++||+
T Consensus         1 ~~vlItGas~giG~~la~~l~~~--~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~   62 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR--HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSA   62 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc--CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999887  78888887431                356777775432        69999999


Q ss_pred             ccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchH
Q 019060          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYD  177 (346)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~  177 (346)
                      ||......    ..++..+.+++|+.++.++++++...   +.+++++||.....                +......|+
T Consensus        63 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~----------------~~~~~~~Y~  126 (199)
T PRK07578         63 AGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE----------------PIPGGASAA  126 (199)
T ss_pred             CCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC----------------CCCCchHHH
Confidence            98644322    22356677889999999999887542   23799999865431                222335799


Q ss_pred             HhHHHHHHHHHHHHHH--hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          178 EGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       178 ~sK~~~E~~~~~~~~~--~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      .+|...+.+.+.++.+  .++++..++||.+-.+.         ...      +..+    +.   ..++..+|+|+.++
T Consensus       127 ~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~---------~~~------~~~~----~~---~~~~~~~~~a~~~~  184 (199)
T PRK07578        127 TVNGALEGFVKAAALELPRGIRINVVSPTVLTESL---------EKY------GPFF----PG---FEPVPAARVALAYV  184 (199)
T ss_pred             HHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCch---------hhh------hhcC----CC---CCCCCHHHHHHHHH
Confidence            9999999999988775  47888999998764331         000      0001    01   23678999999999


Q ss_pred             HHHhCCC-CCcEE
Q 019060          256 RLMEGEN-TGPIN  267 (346)
Q Consensus       256 ~~~~~~~-~~~~~  267 (346)
                      .+++... +++++
T Consensus       185 ~~~~~~~~g~~~~  197 (199)
T PRK07578        185 RSVEGAQTGEVYK  197 (199)
T ss_pred             HHhccceeeEEec
Confidence            9998654 33444

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.64  E-value=1.3e-14  Score=127.29  Aligned_cols=209  Identities=15%  Similarity=0.067  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC--------CCcchhhhhc-C-CCCeeEEecccCCccc-----
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--------GSKDNLRKWI-G-HPRFELIRHDVTEPLL-----   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~--------~~~~~~~~~~-~-~~~~~~~~~d~~~~~~-----   95 (346)
                      .++++|||||++.||++++++|++.| +.|++++|..+        .........+ . ...+.++.+|+++.+.     
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G-~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            36899999999999999999999999 99988877531        1111111111 1 2246788999998643     


Q ss_pred             -------CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----Hc---C----CeEEEEecccccCC
Q 019060           96 -------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RV---G----ARILLTSTSEVYGD  153 (346)
Q Consensus        96 -------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~---~----~r~i~~SS~~v~~~  153 (346)
                             .++|++||+||......    ..+++...+++|+.++..+.+++.    +.   +    .++|++||...+. 
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-  162 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ-  162 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc-
Confidence                   25899999999754321    234567788999999888877663    21   1    3799999976532 


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCC
Q 019060          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE  230 (346)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~  230 (346)
                                     +......|+.+|.+.+.+.+.++.+   .++++..|.|+ +..+.        ............
T Consensus       163 ---------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~--------~~~~~~~~~~~~  218 (286)
T PRK07791        163 ---------------GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM--------TETVFAEMMAKP  218 (286)
T ss_pred             ---------------CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc--------chhhHHHHHhcC
Confidence                           1122356999999999999887765   47899999997 42221        111111111110


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC---CCc-EEecCCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNPG  272 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~-~~~~~~~  272 (346)
                             +.....+...+|+|++++.++....   .|. +.+.++.
T Consensus       219 -------~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        219 -------EEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             -------cccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence                   0111235678999999999886532   444 4444443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.64  E-value=2.8e-14  Score=124.13  Aligned_cols=212  Identities=12%  Similarity=0.032  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++.+|||||++  .||+.++++|++.| +.|++..|+.. ..+...+.... .....+.+|+++.+..           
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~G-a~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQG-AELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCC-CEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            467899999997  99999999999999 99998887531 11122222111 1234689999987432           


Q ss_pred             -CCCEEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHH---cCCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~---~~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       .+|++|||||.....        ...+++...+++|+.++..+++++..   .+.++|++||.....            
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~------------  151 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR------------  151 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc------------
Confidence             599999999965321        12345677888999998888776542   134899999875421            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+..... .. ......... .. .+.       
T Consensus       152 ----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~-~~-~~~~~~~~~-~~-~p~-------  216 (271)
T PRK06505        152 ----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGI-GD-ARAIFSYQQ-RN-SPL-------  216 (271)
T ss_pred             ----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccC-cc-hHHHHHHHh-hc-CCc-------
Confidence                11122469999999999999887764   68999999999876532100 00 001111111 11 111       


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+...+|+|++++.++....   .| .+.+.++
T Consensus       217 ~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        217 RRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             cccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence            124578999999999887543   34 4555554

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2.9e-14  Score=121.87  Aligned_cols=186  Identities=15%  Similarity=0.119  Sum_probs=120.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      .++++++||||+|+||++++++|+++| +.|++++|+.....   ..... .....+.+|+++.+.     .++|++|||
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G-~~Vi~~~r~~~~~~---~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnn   86 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKG-AKVIGLTHSKINNS---ESNDE-SPNEWIKWECGKEESLDKQLASLDVLILN   86 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEECCchhhh---hhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence            346899999999999999999999999 99999988642111   11111 122567888887642     369999999


Q ss_pred             ccCCCcc-ccccChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          105 ACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       105 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      ||..... ...+++...+++|+.++..+++++...        +..++..||...+.                +. ....
T Consensus        87 AG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~----------------~~-~~~~  149 (245)
T PRK12367         87 HGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ----------------PA-LSPS  149 (245)
T ss_pred             CccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC----------------CC-CCch
Confidence            9864322 234567888999999999999876431        22344445543221                11 2246


Q ss_pred             hHHhHHHHHHHHHHHHH-------HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          176 YDEGKRVAETLMFDYHR-------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~-------~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      |+.||...+.+. .+++       ..++.+..+.|+.+..+        +           .      .    ...+..+
T Consensus       150 Y~aSKaal~~~~-~l~~~l~~e~~~~~i~v~~~~pg~~~t~--------~-----------~------~----~~~~~~~  199 (245)
T PRK12367        150 YEISKRLIGQLV-SLKKNLLDKNERKKLIIRKLILGPFRSE--------L-----------N------P----IGIMSAD  199 (245)
T ss_pred             hHHHHHHHHHHH-HHHHHHHHhhcccccEEEEecCCCcccc--------c-----------C------c----cCCCCHH
Confidence            999999986543 3322       23566666666443211        0           0      0    1246789


Q ss_pred             HHHHHHHHHHhCCCCCcEE
Q 019060          249 DMVDGLIRLMEGENTGPIN  267 (346)
Q Consensus       249 Dva~~i~~~~~~~~~~~~~  267 (346)
                      |+|+.++.++.+....++.
T Consensus       200 ~vA~~i~~~~~~~~~~~~~  218 (245)
T PRK12367        200 FVAKQILDQANLGLYLIIV  218 (245)
T ss_pred             HHHHHHHHHHhcCCceEEE
Confidence            9999999999866554443

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.64  E-value=4.9e-15  Score=128.44  Aligned_cols=161  Identities=18%  Similarity=0.110  Sum_probs=116.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      .+++++||||+|+||++++++|+++| ++|++++|+.... +.+.... ...+..+.+|+.+.+.            .++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~-~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEG-ARVAVLDKSAAGL-QELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999 9999998854221 1111111 2357788999988632            258


Q ss_pred             CEEEEcccCCCcc-c----cc----cChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPI-F----YK----YNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~-~----~~----~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |++||+||..... .    ..    .++...+++|+.++..+++++...    +.++|++||...+.             
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~-------------  147 (262)
T TIGR03325        81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFY-------------  147 (262)
T ss_pred             CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceec-------------
Confidence            9999999864211 1    11    235678899999999998887542    23788888865431             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPR  210 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~  210 (346)
                         +......|+.+|...+.+.+.++.+.+  +++..+.||.+..+.
T Consensus       148 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~  191 (262)
T TIGR03325       148 ---PNGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDL  191 (262)
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCC
Confidence               112234699999999999999888753  788999999987664

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.64  E-value=2e-14  Score=121.45  Aligned_cols=189  Identities=16%  Similarity=0.193  Sum_probs=132.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC---------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~d~vi~  103 (346)
                      |+++||||+|.||+++++.|.++| +.|+++.|+..    .+.......++..+.+|+.+.+..         ++|++||
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g-~~v~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~   75 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDG-HKVTLVGARRD----DLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVN   75 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence            589999999999999999999999 99999988532    222221112467888999986532         4899999


Q ss_pred             cccCCC----cc---c--cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          104 LACPAS----PI---F--YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       104 ~a~~~~----~~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      ++|...    +.   .  ..++..+.+++|+.+...+++++...   +.++|++||...                  +  
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------------------~--  135 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------------------P--  135 (223)
T ss_pred             CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------------------C--
Confidence            997421    10   0  23456788899999999998887542   348999998641                  0  


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+   .++++..+.||.+..+.            ... ...  .          ..-.++
T Consensus       136 ~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~------------~~~-~~~--~----------p~~~~~  190 (223)
T PRK05884        136 AGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPG------------YDG-LSR--T----------PPPVAA  190 (223)
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchh------------hhh-ccC--C----------CCCCHH
Confidence            1246999999999999988775   36889999998876431            000 000  0          112679


Q ss_pred             HHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          249 DMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       249 Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      |++++++.++....   .| .+.+.++
T Consensus       191 ~ia~~~~~l~s~~~~~v~G~~i~vdgg  217 (223)
T PRK05884        191 EIARLALFLTTPAARHITGQTLHVSHG  217 (223)
T ss_pred             HHHHHHHHHcCchhhccCCcEEEeCCC
Confidence            99999999887543   33 4555544

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=9.4e-14  Score=119.96  Aligned_cols=198  Identities=16%  Similarity=0.072  Sum_probs=131.1

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCC-------cc---hhhhhcC--CCCeeEEecccCCcccC
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGS-------KD---NLRKWIG--HPRFELIRHDVTEPLLI   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~-------~~---~~~~~~~--~~~~~~~~~d~~~~~~~   96 (346)
                      .+++||||||+|  .||.+++++|+++| ++|++++|....+       ..   .....+.  ...+..+.+|+.+.+..
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G-~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAG-ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCC-CeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            368999999995  89999999999999 8888875431110       11   1111111  13567889999986432


Q ss_pred             ------------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEecccccCCCC
Q 019060           97 ------------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG-ARILLTSTSEVYGDPL  155 (346)
Q Consensus        97 ------------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~r~i~~SS~~v~~~~~  155 (346)
                                  .+|++||+||......    ..++....+++|+.+...+..+    +++.+ .++|++||.....   
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---  160 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG---  160 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC---
Confidence                        4899999998654321    2234566788999988877543    34333 3899999976532   


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
                                   +..+...|+.+|...+.+.+.++.+   .+++++.++||.+-.+...       ...........+ 
T Consensus       161 -------------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-------~~~~~~~~~~~~-  219 (256)
T PRK12859        161 -------------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-------EEIKQGLLPMFP-  219 (256)
T ss_pred             -------------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-------HHHHHHHHhcCC-
Confidence                         2233467999999999998888765   4789999999988665311       111111111111 


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                              ...+...+|+|++++.++...
T Consensus       220 --------~~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        220 --------FGRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             --------CCCCcCHHHHHHHHHHHhCcc
Confidence                    113457899999999988654

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.7e-14  Score=123.55  Aligned_cols=211  Identities=14%  Similarity=0.090  Sum_probs=138.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC--------CCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI--------EVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~--------~~d~  100 (346)
                      .+++++||||+|.||+++++.|++.| +.|++++|+..........+..  ..++.++.+|+++.+..        .+|+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEG-CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            36899999999999999999999999 8999999864322111111111  23577889999986432        5999


Q ss_pred             EEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +||++|......    ..++....+++|+.+...+++++    ++.+ .++|++||....                .+..
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~----------------~~~~  148 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGE----------------NPDA  148 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCcccc----------------CCCC
Confidence            999998653221    22345677889999888887765    3333 379999886432                1222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH----------HHHHHHHHcCCCeEEecCC
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV----------SNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~  238 (346)
                      ....|+.+|...+.+.+.++.+   .+++++.+.||.+..+...    .++          .........  ..      
T Consensus       149 ~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~------  216 (259)
T PRK06125        149 DYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRML----TLLKGRARAELGDESRWQELLA--GL------  216 (259)
T ss_pred             CchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHH----HHHHhhhhcccCCHHHHHHHhc--cC------
Confidence            2346899999999999887654   3789999999888765210    000          000011100  00      


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                       ....+..++|+|++++.++....   .| .+.+.++
T Consensus       217 -~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        217 -PLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             -CcCCCcCHHHHHHHHHHHcCchhccccCceEEecCC
Confidence             01236688999999999886542   34 4555554

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.63  E-value=3.8e-14  Score=126.00  Aligned_cols=228  Identities=12%  Similarity=0.127  Sum_probs=138.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |+++++||||++.||.+++++|+++|.+.|++++|+.....+...... ....+..+.+|+.+....            +
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            577999999999999999999999985688888886432221111111 123567889999986432            5


Q ss_pred             CCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHH----HHcC---CeEEEEecccccCCCCC----CCCCC
Q 019060           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYGDPLV----HPQDE  161 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~r~i~~SS~~v~~~~~~----~~~~e  161 (346)
                      +|++||+||...+.     ...+.....+++|+.+...+++++    ++.+   .++|++||...+.....    .+...
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            99999999964321     122455677899999887776554    3332   49999999876532100    00000


Q ss_pred             CC-------c------CCCCCCCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHH
Q 019060          162 SY-------W------GNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA  224 (346)
Q Consensus       162 ~~-------~------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~  224 (346)
                      .+       +      ....+..+...|+.||.+...+.+.++++    .++.++.++||.+...............+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence            00       0      00122344567999999988888877664    3688999999998633211111111111111


Q ss_pred             HHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CCcEEe
Q 019060          225 QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINI  268 (346)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~  268 (346)
                      ....   ...       ..+..+++.|+.++.++....   .|.|.-
T Consensus       242 ~~~~---~~~-------~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~  278 (314)
T TIGR01289       242 PFQK---YIT-------KGYVSEEEAGERLAQVVSDPKLKKSGVYWS  278 (314)
T ss_pred             HHHH---HHh-------ccccchhhhhhhhHHhhcCcccCCCceeee
Confidence            1100   000       124577888888888776543   455554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.63  E-value=1.8e-14  Score=128.07  Aligned_cols=191  Identities=15%  Similarity=0.073  Sum_probs=131.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCc--c----------c
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEP--L----------L   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~--~----------~   95 (346)
                      .++.++||||||.||++++++|.++| +.|++++|+.....+...+..   ....+..+.+|+.+.  +          .
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G-~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKG-LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            36899999999999999999999999 899999996532222111111   123466778888742  1          1


Q ss_pred             CCCCEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCc
Q 019060           96 IEVDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      .++|++||+||...+.      ...++....+++|+.++..+.+++.    +.+ .++|++||...+..+          
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------  200 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------  200 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------
Confidence            1467999999975321      1223456788999999998888754    334 389999998764210          


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+.   ++++++++||.+-.+...              ....          .
T Consensus       201 ----~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~--------------~~~~----------~  252 (320)
T PLN02780        201 ----SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS--------------IRRS----------S  252 (320)
T ss_pred             ----CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc--------------ccCC----------C
Confidence                01123579999999999999887764   789999999988655210              0000          0


Q ss_pred             eecccHHHHHHHHHHHHhC
Q 019060          242 RSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~  260 (346)
                      .-....+++|+.++..+..
T Consensus       253 ~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        253 FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CCCCCHHHHHHHHHHHhCC
Confidence            1135789999999998863

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=1.2e-14  Score=142.29  Aligned_cols=193  Identities=14%  Similarity=0.086  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|+++||||+|+||++++++|+++| ++|++++|+.....+....... ..++.++.+|+.+.+..            +
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAG-ATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999 9999999864322211111111 23578899999987432            5


Q ss_pred             CCEEEEcccCCCcccc------ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           98 VDQIYHLACPASPIFY------KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      +|++||+||.......      .++....+++|+.++.++++++    ++.+. ++|++||...+..             
T Consensus       449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  515 (657)
T PRK07201        449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN-------------  515 (657)
T ss_pred             CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC-------------
Confidence            9999999996432111      1346778899999988876665    34444 8999999887642             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                         ......|+.+|.+.+.+.+.++.+   .++++++++||.+..+.....               ...       ....
T Consensus       516 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~---------------~~~-------~~~~  570 (657)
T PRK07201        516 ---APRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT---------------KRY-------NNVP  570 (657)
T ss_pred             ---CCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc---------------ccc-------cCCC
Confidence               112356999999999999887765   379999999999987642110               000       0113


Q ss_pred             cccHHHHHHHHHHHHhCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~  262 (346)
                      .+..+++|+.++..+.+..
T Consensus       571 ~~~~~~~a~~i~~~~~~~~  589 (657)
T PRK07201        571 TISPEEAADMVVRAIVEKP  589 (657)
T ss_pred             CCCHHHHHHHHHHHHHhCC
Confidence            5789999999999876543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.63  E-value=4.7e-14  Score=121.95  Aligned_cols=202  Identities=14%  Similarity=0.032  Sum_probs=134.3

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+  +.||++++++|++.| +.|+++.|+... .+.+.+... .....++.+|+++.+..           
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G-~~v~l~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALG-AELAVTYLNDKA-RPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcC-CEEEEEeCChhh-HHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence            46899999998  599999999999999 999988885321 111222111 12345789999986432           


Q ss_pred             -CCCEEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++|||||.....        ...++....+++|+.+...+.+++...   +.++|++||.....            
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~------------  154 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK------------  154 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc------------
Confidence             589999999864321        122456788899999999988876432   24899999865321            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+   .++++..+.||.+-.+..... .. ...........  .+       .
T Consensus       155 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~--~p-------~  219 (258)
T PRK07533        155 ----VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DD-FDALLEDAAER--AP-------L  219 (258)
T ss_pred             ----CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CC-cHHHHHHHHhc--CC-------c
Confidence                1112346999999999999888765   378999999998866531100 00 11112222111  11       1


Q ss_pred             eecccHHHHHHHHHHHHhCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..+...+|+|++++.++...
T Consensus       220 ~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        220 RRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             CCCCCHHHHHHHHHHHhChh
Confidence            13567899999999998753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=7.8e-14  Score=120.65  Aligned_cols=212  Identities=15%  Similarity=0.070  Sum_probs=136.4

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||++  .||+++++.|++.| +.|++.+|+. ...+...+... .+....+.+|+.+.+..           
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G-~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCC-CEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            357999999985  99999999999999 9998888752 11222222221 13456789999986432           


Q ss_pred             -CCCEEEEcccCCCccc---------cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPIF---------YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                       ++|++||+||......         ..++....+++|+.+...+.+++...   +.++|++||.....           
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------  151 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------  151 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------
Confidence             4899999999643211         12344567788988887777765432   23799999875321           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|...+.+.+.++.+   .++++..+.||.+..+.... ... ............+         
T Consensus       152 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~~~~p---------  215 (262)
T PRK07984        152 -----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKD-FRKMLAHCEAVTP---------  215 (262)
T ss_pred             -----CCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCc-hHHHHHHHHHcCC---------
Confidence                 1112246999999999999988876   37899999998886542100 000 1111111111111         


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ...+..++|++++++.++....   .| .+.+.++
T Consensus       216 ~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        216 IRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             CcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            1236788999999999987543   33 4555444

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.62  E-value=3.7e-14  Score=123.49  Aligned_cols=211  Identities=13%  Similarity=0.024  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~----------   96 (346)
                      .+++++||||+  +.||++++++|.+.| +.|++..|+.. ..+.+.+...  ... ..+.+|+++.+..          
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G-~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQG-AELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHH
Confidence            46899999997  799999999999999 99998888531 1122222211  112 5789999997542          


Q ss_pred             --CCCEEEEcccCCCc----c----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASP----I----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 --~~d~vi~~a~~~~~----~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                        ++|++|||||....    .    ...++....+++|+.+...+.+++...   +.++|++||.....           
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~-----------  149 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK-----------  149 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc-----------
Confidence              59999999996532    1    123456778899999998888766432   24899999865321           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|...+.+.+.++.+   .++++..+.||.+..+..... .. .... ..... ...+       
T Consensus       150 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~-~~~~~-~~~p-------  213 (274)
T PRK08415        150 -----YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GD-FRMI-LKWNE-INAP-------  213 (274)
T ss_pred             -----CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-ch-hhHH-hhhhh-hhCc-------
Confidence                 1112246999999999999988875   368899999998876421100 00 0000 00000 0111       


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ...+..++|+|++++.++....   .| .+.+.++
T Consensus       214 l~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG  248 (274)
T PRK08415        214 LKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG  248 (274)
T ss_pred             hhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence            1135678999999999887532   44 4555554

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=6.5e-14  Score=121.18  Aligned_cols=212  Identities=14%  Similarity=0.025  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++.++||||++  .||.++++.|.++| +.|++.+|+. ...+...+.... .....+.+|+.+.+..           
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G-~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHG-AELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcC-CEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999997  89999999999999 8998887752 112222222211 1223578999987432           


Q ss_pred             -CCCEEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||.....        ...++....+++|+.+...+++++...   +.++|++||.....            
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------  152 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------  152 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------
Confidence             599999999864321        122456778899999988888765321   24899999965421            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+   .++++..+.||.+-.+..... .. ...........  .+       .
T Consensus       153 ----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~--~p-------~  217 (260)
T PRK06603        153 ----VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GD-FSTMLKSHAAT--AP-------L  217 (260)
T ss_pred             ----CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CC-cHHHHHHHHhc--CC-------c
Confidence                1112256999999999999988765   368999999998865521100 00 01111111111  11       1


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+...+|+|++++.++....   .| .+.+.++
T Consensus       218 ~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        218 KRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             CCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence            135678999999999997543   33 4555444

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=6.3e-14  Score=121.34  Aligned_cols=212  Identities=13%  Similarity=-0.001  Sum_probs=135.5

Q ss_pred             CCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||  ++.||++++++|+++| +.|++..|.. ...+...+.... .....+.+|+.+.+..           
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQG-AELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            3579999997  6799999999999999 8998876642 122222222211 2345789999987432           


Q ss_pred             -CCCEEEEcccCCCcc----c-----cccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPI----F-----YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~----~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                       ++|++|||||.....    .     ..+.....+++|+.+...+.+++.    +.+.++|++||...+.          
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~----------  152 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR----------  152 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc----------
Confidence             599999999975421    0     112345567788888777766543    2224799999876531          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+   .++++..+.||.+-.+..... .. ...........  .+      
T Consensus       153 ------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~--~p------  216 (261)
T PRK08690        153 ------AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGI-AD-FGKLLGHVAAH--NP------  216 (261)
T ss_pred             ------CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcC-Cc-hHHHHHHHhhc--CC------
Confidence                  1122356999999999998887654   478999999998876531100 00 01111111111  11      


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                       ...+..++|+|++++.++....   .| .+.+.++
T Consensus       217 -~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG  251 (261)
T PRK08690        217 -LRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGG  251 (261)
T ss_pred             -CCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence             1236778999999999997543   33 4555544

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=7.1e-14  Score=120.69  Aligned_cols=212  Identities=13%  Similarity=0.038  Sum_probs=137.0

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~---------   96 (346)
                      .+++++||||+  +.||++++++|+++| ++|++..|+.. ..+.+.+.   ....++..+.+|+++.+..         
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G-~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAG-AKLVFTYAGER-LEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEecCccc-chHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence            36899999997  899999999999999 99998877431 12222222   2223577889999987432         


Q ss_pred             ---CCCEEEEcccCCCc----cc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASP----IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                         ++|++|||||....    ..    ..+.....+++|+.+...+.+++...   +.++|++||....-          
T Consensus        84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------  153 (257)
T PRK08594         84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------  153 (257)
T ss_pred             hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc----------
Confidence               59999999986431    11    12234566788888888777665432   24899999975421          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+.   ++++..+.||.+..+..... .. ...........  .+      
T Consensus       154 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~-~~~~~~~~~~~--~p------  217 (257)
T PRK08594        154 ------VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GG-FNSILKEIEER--AP------  217 (257)
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-cc-ccHHHHHHhhc--CC------
Confidence                  11122469999999999999887653   68999999998876521100 00 00111111110  11      


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                       ...+...+|+|++++.++....   .| .+.+.++
T Consensus       218 -~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        218 -LRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             -ccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence             1235678999999999887543   34 4444443

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.61  E-value=8.1e-14  Score=121.31  Aligned_cols=212  Identities=15%  Similarity=0.040  Sum_probs=138.4

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+  +.||.++++.|++.| +.|++..|.. ...+.+.+.... .....+.+|+.+.+..           
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G-~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAG-AELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            46899999997  899999999999999 8998877642 112222222111 2345689999986432           


Q ss_pred             -CCCEEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||.....        ...++....+++|+.++..+++++...   +.++|++||.....            
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~------------  154 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEK------------  154 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccccc------------
Confidence             599999999965321        122456788899999999998876542   23899999864321            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+.   ++++.++.||.+..+..... .. ... ....... ..+.       
T Consensus       155 ----~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-~~~-~~~~~~~-~~p~-------  219 (272)
T PRK08159        155 ----VMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GD-FRY-ILKWNEY-NAPL-------  219 (272)
T ss_pred             ----CCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Cc-chH-HHHHHHh-CCcc-------
Confidence                11123569999999999999887763   68999999998865421100 00 000 1111111 1111       


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+...+|+|++++.++....   .| .+.+.++
T Consensus       220 ~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        220 RRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             cccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            135678999999999997543   44 4555554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.61  E-value=1e-13  Score=118.21  Aligned_cols=199  Identities=15%  Similarity=0.104  Sum_probs=131.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi~  103 (346)
                      |+|+||||+|+||++++++|++++. ..|....|.....       ....++.++++|+.+.+.        .++|+|||
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~   73 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN   73 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence            6899999999999999999999862 4555555533211       123467889999998653        26999999


Q ss_pred             cccCCCccc----------cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060          104 LACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus       104 ~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +||......          ..+.....+.+|+.+...+.+++..    .+ .+++++||...  ..     .+      .
T Consensus        74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~--~~-----~~------~  140 (235)
T PRK09009         74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG--SI-----SD------N  140 (235)
T ss_pred             CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc--cc-----cc------C
Confidence            999764211          1122446778888888877776543    23 37889887431  10     00      1


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +..+...|+.+|...+.+.+.++.+     .++.+..+.||.+..+...    .        ....  .       ....
T Consensus       141 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~----~--------~~~~--~-------~~~~  199 (235)
T PRK09009        141 RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK----P--------FQQN--V-------PKGK  199 (235)
T ss_pred             CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc----c--------hhhc--c-------ccCC
Confidence            1123357999999999999988765     2677888999888765411    0        0000  0       1123


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~  272 (346)
                      +...+|+|++++.++....   .|.+....++
T Consensus       200 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        200 LFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             CCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            6788999999999997653   5555444434

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.61  E-value=7.2e-14  Score=117.61  Aligned_cols=197  Identities=13%  Similarity=0.090  Sum_probs=143.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++.||||||++.+|+.++.+++++| ..+.+.+.+.....+..+.......+..+.||+++.+..            .+
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg-~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRG-AKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhC-CeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            47899999999999999999999999 888888988766666665554334688999999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHc-CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRV-GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||......    .++..++.+++|+.+.....++.    .+. ..++|.++|....-                .
T Consensus       116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~----------------g  179 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLF----------------G  179 (300)
T ss_pred             eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhccc----------------C
Confidence            99999999766443    33456788899999988877654    333 34899999876431                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH------hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ------HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      .....+|+.||.++.-+-+++..+      .+++.+.+.|+.+-..            ++    .+ ..    .-...+.
T Consensus       180 ~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg------------mf----~~-~~----~~~~l~P  238 (300)
T KOG1201|consen  180 PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG------------MF----DG-AT----PFPTLAP  238 (300)
T ss_pred             CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc------------cc----CC-CC----CCccccC
Confidence            233356999999998887766543      2577888888665421            11    11 11    1123457


Q ss_pred             cccHHHHHHHHHHHHhCCCCCc
Q 019060          244 FCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      .+..+.||+-|+.++..+..+.
T Consensus       239 ~L~p~~va~~Iv~ai~~n~~~~  260 (300)
T KOG1201|consen  239 LLEPEYVAKRIVEAILTNQAGL  260 (300)
T ss_pred             CCCHHHHHHHHHHHHHcCCccc
Confidence            8889999999999988766443

>PRK05599 hypothetical protein; Provisional

Probab=99.59  E-value=1.5e-13  Score=117.95  Aligned_cols=196  Identities=13%  Similarity=0.115  Sum_probs=129.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |+++||||++.||.+++++|. .| +.|+++.|+.....+...+...  ...+..+.+|+.|.+..            ++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g-~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HG-EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999998 58 9999999864332222222211  12477899999997432            59


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHH----HHHHcC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLG----LAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~----~~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||.......    ........++|+.+...++.    .+.+.+  .++|++||...+-                
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------  142 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR----------------  142 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc----------------
Confidence            999999997543211    11233445667766665443    344432  4899999976431                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+.   +++++.+.||.+..+...                +.. .   .   . -..
T Consensus       143 ~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~----------------~~~-~---~---~-~~~  198 (246)
T PRK05599        143 ARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTT----------------GMK-P---A---P-MSV  198 (246)
T ss_pred             CCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhc----------------CCC-C---C---C-CCC
Confidence            11223569999999999998887763   678888999877654210                000 0   0   0 024


Q ss_pred             cHHHHHHHHHHHHhCCC-CCcEEecC
Q 019060          246 YVSDMVDGLIRLMEGEN-TGPINIGN  270 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~-~~~~~~~~  270 (346)
                      ..+|+|++++.++.+.. .+.+.+.+
T Consensus       199 ~pe~~a~~~~~~~~~~~~~~~~~~~~  224 (246)
T PRK05599        199 YPRDVAAAVVSAITSSKRSTTLWIPG  224 (246)
T ss_pred             CHHHHHHHHHHHHhcCCCCceEEeCc
Confidence            68999999999998765 34455544

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.59  E-value=2.8e-14  Score=120.76  Aligned_cols=159  Identities=16%  Similarity=0.153  Sum_probs=113.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC----------CCCEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI----------EVDQIY  102 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------~~d~vi  102 (346)
                      ++++||||+|+||++++++|+++| +.|++++|+..... .+..   ..++.++.+|+.+.+..          ++|+||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G-~~V~~~~r~~~~~~-~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERG-WQVTATVRGPQQDT-ALQA---LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCC-CEEEEEeCCCcchH-HHHh---ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence            689999999999999999999999 99999998653321 2222   23577888999886422          599999


Q ss_pred             EcccCCCccc------cccChHHHHHHHHHHHHHHHHHHHHc---C-CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKRV---G-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+||......      ...+....+.+|+.+...+++++...   + .+++++||..  +....           .+..+
T Consensus        77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~-----------~~~~~  143 (225)
T PRK08177         77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL-----------PDGGE  143 (225)
T ss_pred             EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc-----------CCCCC
Confidence            9998753211      12344566778888888888776532   2 3688888753  21100           11223


Q ss_pred             CCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGP  209 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~  209 (346)
                      ...|+.+|.+.+.+++.++.+.   ++.++.++||.+-.+
T Consensus       144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~  183 (225)
T PRK08177        144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD  183 (225)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence            3469999999999999887653   578999999888655

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.59  E-value=1.3e-13  Score=119.11  Aligned_cols=213  Identities=15%  Similarity=0.082  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCC--CcchhhhhcCC-CCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIGH-PRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~~-~~~~~~~~d~~~~~~~---------   96 (346)
                      ++++++||||+  +.||++++++|.+.| ++|++..|....  ..+...+.... .....+.+|+.+.+..         
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAG-AELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCC-CEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            46799999986  799999999999999 998877664321  11222222111 2356789999987443         


Q ss_pred             ---CCCEEEEcccCCCc-----cc---cccChHHHHHHHHHHHHHHHHHHHH---cCCeEEEEecccccCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASP-----IF---YKYNPVKTIKTNVIGTLNMLGLAKR---VGARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~-----~~---~~~~~~~~~~~n~~~~~~l~~~~~~---~~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                         ++|++|||||....     ..   ..++....+++|+.++..+.+++..   .+.++|++||.....          
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~----------  153 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR----------  153 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------
Confidence               59999999996531     11   2234577888999998888776542   134899999975431          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+..... .. .+..........+        
T Consensus       154 ------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~-~~~~~~~~~~~~p--------  217 (258)
T PRK07370        154 ------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GG-ILDMIHHVEEKAP--------  217 (258)
T ss_pred             ------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-cc-chhhhhhhhhcCC--------
Confidence                  11223569999999999999888764   68999999998876531100 00 0111111111111        


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                       ...+...+|++++++.++....   .| .+.+.++
T Consensus       218 -~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        218 -LRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             -cCcCCCHHHHHHHHHHHhChhhccccCcEEEECCc
Confidence             1246678999999999987543   33 4555443

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.59  E-value=2.1e-13  Score=118.00  Aligned_cols=212  Identities=13%  Similarity=-0.022  Sum_probs=136.7

Q ss_pred             CCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++||||  ++.||.+++++|++.| +.|++..|.. ...+.+.+.... .....+.+|+.+.+..           
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G-~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREG-AELAFTYVGD-RFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCC-CeEEEEccch-HHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            3689999996  6799999999999999 9998876532 112222222111 2234688999987433           


Q ss_pred             -CCCEEEEcccCCCcc---------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                       ++|++||+||.....         ...++....+++|+.+...+.+++...   +.++|++||.....           
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----------  151 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----------  151 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----------
Confidence             599999999975321         122355677899999998888776542   23899999875421           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+.... ... ...........  .+       
T Consensus       152 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~~~--~p-------  215 (260)
T PRK06997        152 -----VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKD-FGKILDFVESN--AP-------  215 (260)
T ss_pred             -----CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccc-hhhHHHHHHhc--Cc-------
Confidence                 11123469999999999999887753   6899999999886542110 000 01111111111  11       


Q ss_pred             eeecccHHHHHHHHHHHHhCCC---C-CcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN---T-GPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~---~-~~~~~~~~  271 (346)
                      ...+..++|++++++.++..+.   . .++.+.++
T Consensus       216 ~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        216 LRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             ccccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            1136788999999999987543   3 34555544

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.58  E-value=2.7e-13  Score=117.02  Aligned_cols=201  Identities=14%  Similarity=0.066  Sum_probs=131.1

Q ss_pred             CCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------   96 (346)
                      +++++||||  ++.||.+++++|++.| +.|++++|+.. ...+.+..... ..+.++.+|+.+.+..            
T Consensus         7 ~k~~lItGa~~s~GIG~a~a~~la~~G-~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          7 GKRILVTGVITDSSIAFHVARVAQEQG-AEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             CCEEEEeCCCCcchHHHHHHHHHHHCC-CEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            579999999  8999999999999999 99999887531 11122222122 2567899999987432            


Q ss_pred             CCCEEEEcccCCCcc-----c---cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 EVDQIYHLACPASPI-----F---YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~---~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      ++|++||+||.....     .   ..++..+.+++|+.+...+.+++...   +.++|++|+....+             
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-------------  151 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-------------  151 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-------------
Confidence            599999999975321     1   12345567899999988887766431   23788887543211             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                          ......|+.+|...+.+.+.++.+   .++++..+.||.+-.+.......  ...........  .+.      .+
T Consensus       152 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~--~p~------~~  217 (256)
T PRK07889        152 ----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG--FELLEEGWDER--APL------GW  217 (256)
T ss_pred             ----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC--cHHHHHHHHhc--Ccc------cc
Confidence                111245899999999999888765   37899999999887653110000  01111111111  110      01


Q ss_pred             ecccHHHHHHHHHHHHhCC
Q 019060          243 SFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~  261 (346)
                      .+...+|+|++++.++...
T Consensus       218 ~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        218 DVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             ccCCHHHHHHHHHHHhCcc
Confidence            3568899999999998754

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.58  E-value=1.6e-13  Score=128.32  Aligned_cols=208  Identities=17%  Similarity=0.105  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|.||..+++.|.++| ++|++++|..  ..+.+.......+...+.+|+++....            ++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~G-a~vi~~~~~~--~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDG-AHVVCLDVPA--AGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCc--cHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999 9999988742  222222222222456788999886432            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcC-----CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+.....+++|+.++.++.+++....     .+||++||...+..                
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g----------------  349 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAG----------------  349 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC----------------
Confidence            99999999754322    234567788999999999999886532     38999999765421                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+++.++.+   .++.+.++.||.+-.+..     ..++.........  +.      .......
T Consensus       350 ~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~-----~~~~~~~~~~~~~--~~------~l~~~~~  416 (450)
T PRK08261        350 NRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT-----AAIPFATREAGRR--MN------SLQQGGL  416 (450)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhh-----hccchhHHHHHhh--cC------CcCCCCC
Confidence            112356999999888888877654   478999999988754321     0011111111111  10      0112234


Q ss_pred             HHHHHHHHHHHHhCCC---CC-cEEecC
Q 019060          247 VSDMVDGLIRLMEGEN---TG-PINIGN  270 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~-~~~~~~  270 (346)
                      ..|+|++++.++....   .| .+.+.+
T Consensus       417 p~dva~~~~~l~s~~~~~itG~~i~v~g  444 (450)
T PRK08261        417 PVDVAETIAWLASPASGGVTGNVVRVCG  444 (450)
T ss_pred             HHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence            6799999999886443   33 455554

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.57  E-value=4.3e-14  Score=122.10  Aligned_cols=197  Identities=12%  Similarity=0.031  Sum_probs=129.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHh----cCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC----------
Q 019060           34 RILVTGGAGFIGSHLVDKLME----NEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~----------   96 (346)
                      .++||||+|.||.+++++|.+    .| +.|+++.|+.....+...++..   ...+.++.+|+.+.+..          
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~   80 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPG-SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL   80 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCC-cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence            589999999999999999997    68 8999999864332222222211   23577899999986422          


Q ss_pred             ------CCCEEEEcccCCCcc---c----cccChHHHHHHHHHHHHHHHHHHH----Hc-C--CeEEEEecccccCCCCC
Q 019060           97 ------EVDQIYHLACPASPI---F----YKYNPVKTIKTNVIGTLNMLGLAK----RV-G--ARILLTSTSEVYGDPLV  156 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~----~~-~--~r~i~~SS~~v~~~~~~  156 (346)
                            +.|++||+||.....   .    ..++....+++|+.++..+.+++.    +. +  .++|++||...+.    
T Consensus        81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~----  156 (256)
T TIGR01500        81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ----  156 (256)
T ss_pred             cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC----
Confidence                  136999999864321   1    123456788999999877766543    22 2  3799999986542    


Q ss_pred             CCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHH-----HHHHHHHc
Q 019060          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVS-----NFIAQAIR  228 (346)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~-----~~~~~~~~  228 (346)
                                  +......|+.+|...+.+.+.++.+.   ++.++.+.||.+-.+...    ....     .....+..
T Consensus       157 ------------~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~  220 (256)
T TIGR01500       157 ------------PFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQ----QVREESVDPDMRKGLQE  220 (256)
T ss_pred             ------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHH----HHHHhcCChhHHHHHHH
Confidence                        22223569999999999999887663   688899999887654210    0000     00000000


Q ss_pred             CCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       229 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ..         ....+..++|+|++++.++++
T Consensus       221 ~~---------~~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       221 LK---------AKGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             HH---------hcCCCCCHHHHHHHHHHHHhc
Confidence            00         011367889999999999864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.55  E-value=9.5e-14  Score=117.96  Aligned_cols=160  Identities=20%  Similarity=0.203  Sum_probs=112.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc---chhhhhcCCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|.|+|||||..||.+++.+|.+.| ..++.+.|.....+   +.+.+.....++..+++|++|.++.           
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G-~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRG-AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCC-CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999 66555555332211   2222223333588899999997543           


Q ss_pred             -CCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++|||||........    .+....+++|+.|+..+.+++    ++.+ .++|.+||..-+-              
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~--------------  155 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKM--------------  155 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccccc--------------
Confidence             699999999976532222    344568899988888777665    5555 5999999987542              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHhCCceE----EEEecccc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR----IARIFNTY  207 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~----ivR~~~i~  207 (346)
                        +......|..||.+.+.+.+.++.+.....+    ++.||.|-
T Consensus       156 --~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~  198 (282)
T KOG1205|consen  156 --PLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIE  198 (282)
T ss_pred             --CCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence              1222237999999999999999888644333    25565553

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.55  E-value=2.1e-13  Score=110.67  Aligned_cols=157  Identities=14%  Similarity=0.099  Sum_probs=111.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh---hhhc-CCCCeeEEecccCCcccC------------
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWI-GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~---~~~~-~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++|+||+|+||.+++++|.++|.+.|+++.|+........   .... ...++.++.+|+.+....            
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            479999999999999999999998446888887643322111   1111 123567889999875322            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      .+|.|||+++......    ...++...++.|+.++..+++++++.+. ++|++||....-                +..
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~----------------~~~  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVL----------------GNP  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhc----------------CCC
Confidence            3799999998654222    2245567789999999999999987665 799999875431                111


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccc
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT  206 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i  206 (346)
                      ....|+.+|...+.+++.+. ..+++++.+.|+.+
T Consensus       145 ~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~  178 (180)
T smart00822      145 GQANYAAANAFLDALAAHRR-ARGLPATSINWGAW  178 (180)
T ss_pred             CchhhHHHHHHHHHHHHHHH-hcCCceEEEeeccc
Confidence            23569999999999996654 45888888888654

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.54  E-value=5.3e-13  Score=120.98  Aligned_cols=186  Identities=15%  Similarity=0.127  Sum_probs=119.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .+|+|+||||+|+||++++++|.++| ++|++++|+..........  ....+..+.+|+.+.+.     .++|++||+|
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G-~~Vi~l~r~~~~l~~~~~~--~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA  253 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQG-AKVVALTSNSDKITLEING--EDLPVKTLHWQVGQEAALAELLEKVDILIINH  253 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHhh--cCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence            46899999999999999999999999 9999998854221111110  11246678899988653     3699999999


Q ss_pred             cCCCcc-ccccChHHHHHHHHHHHHHHHHHHHH----cC----C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          106 CPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKR----VG----A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       106 ~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~----~~----~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      |..... ...++....+++|+.++.++++++..    .+    . .+|.+|++. .                .+ .....
T Consensus       254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~----------------~~-~~~~~  315 (406)
T PRK07424        254 GINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V----------------NP-AFSPL  315 (406)
T ss_pred             CcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c----------------cC-CCchH
Confidence            865322 23345678899999999999988643    22    1 244444321 1                11 11235


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      |+.||.+.+.+........+..+..+.|    ||...    .+                  .   ....+..+|+|+.++
T Consensus       316 Y~ASKaAl~~l~~l~~~~~~~~I~~i~~----gp~~t----~~------------------~---~~~~~spe~vA~~il  366 (406)
T PRK07424        316 YELSKRALGDLVTLRRLDAPCVVRKLIL----GPFKS----NL------------------N---PIGVMSADWVAKQIL  366 (406)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCceEEEEe----CCCcC----CC------------------C---cCCCCCHHHHHHHHH
Confidence            9999999998764322223444444444    43211    10                  0   012468899999999


Q ss_pred             HHHhCCCCCcE
Q 019060          256 RLMEGENTGPI  266 (346)
Q Consensus       256 ~~~~~~~~~~~  266 (346)
                      .+++++...++
T Consensus       367 ~~i~~~~~~i~  377 (406)
T PRK07424        367 KLAKRDFRNII  377 (406)
T ss_pred             HHHHCCCCEEE
Confidence            99987654433

>PRK06484 short chain dehydrogenase; Validated

Probab=99.52  E-value=2.8e-13  Score=129.09  Aligned_cols=161  Identities=19%  Similarity=0.217  Sum_probs=119.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||++.||.+++++|.++| +.|+++.|+...... ....+ ...+.++.+|+.+++..            ++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAG-DQVVVADRNVERARE-RADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 999999885432221 11111 13567789999987432            59


Q ss_pred             CEEEEcccCCCc------cccccChHHHHHHHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           99 DQIYHLACPASP------IFYKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        99 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      |++||+||...+      .....++...+++|+.++..+++++...      +.++|++||......             
T Consensus        81 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~-------------  147 (520)
T PRK06484         81 DVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA-------------  147 (520)
T ss_pred             CEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC-------------
Confidence            999999986321      1223456788999999999888876532      238999999765421             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPR  210 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~  210 (346)
                         ......|+.+|...+.+.+.++.+   .+++++.++||.+..+.
T Consensus       148 ---~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~  191 (520)
T PRK06484        148 ---LPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM  191 (520)
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence               112256999999999999887765   37899999999886653

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.50  E-value=2.2e-13  Score=109.34  Aligned_cols=215  Identities=20%  Similarity=0.224  Sum_probs=144.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC---CCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH---PRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      .+.++.|+.||.|+++++.....+ +.|.++.|+..  ...+..|...   -....+..|..+....++..++.+++.++
T Consensus        53 e~tlvlggnpfsgs~vlk~A~~vv-~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg  129 (283)
T KOG4288|consen   53 EWTLVLGGNPFSGSEVLKNATNVV-HSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG  129 (283)
T ss_pred             HHHhhhcCCCcchHHHHHHHHhhc-eeeeEeecccC--cchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence            478999999999999999999999 99999998642  2223333221   12333444444444557888888776443


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                            +...+..+|-....+.++++.+.++ +|+|+|-.. ||-              .+..| ..|-.+|+++|.-+.
T Consensus       130 ------n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~--------------~~~i~-rGY~~gKR~AE~Ell  187 (283)
T KOG4288|consen  130 ------NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGL--------------PPLIP-RGYIEGKREAEAELL  187 (283)
T ss_pred             ------chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCC--------------CCccc-hhhhccchHHHHHHH
Confidence                  4456667888888888999999998 899999643 321              13334 369999999998775


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCCcc---HHHHHHHHHHc-----CCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIR-----GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ..   ...+-+++|||.+||...-.....   .+...+.....     ...+++.  +......+.+++||.+.+.+++.
T Consensus       188 ~~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~d  262 (283)
T KOG4288|consen  188 KK---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIED  262 (283)
T ss_pred             Hh---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccC
Confidence            43   357788999999999842211111   11222222222     2234443  45667899999999999999998


Q ss_pred             CC-CCcEEecCCCCCCHHHHHHHHHH
Q 019060          261 EN-TGPINIGNPGEFTMLELAENVKE  285 (346)
Q Consensus       261 ~~-~~~~~~~~~~~~s~~ei~~~i~~  285 (346)
                      +. .|+        +++.+|.++..+
T Consensus       263 p~f~Gv--------v~i~eI~~~a~k  280 (283)
T KOG4288|consen  263 PDFKGV--------VTIEEIKKAAHK  280 (283)
T ss_pred             CCcCce--------eeHHHHHHHHHH
Confidence            86 444        455666555443

>PLN00015 protochlorophyllide reductase

Probab=99.50  E-value=1.4e-12  Score=115.65  Aligned_cols=216  Identities=14%  Similarity=0.145  Sum_probs=129.0

Q ss_pred             EEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------CCCEEE
Q 019060           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------EVDQIY  102 (346)
Q Consensus        36 lItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~~d~vi  102 (346)
                      +||||++.||.+++++|+++|.+.|++++|+............ ....+.++.+|+.+.+..            ++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            5999999999999999999985678888885422211111111 123577889999986432            589999


Q ss_pred             EcccCCCcc-----ccccChHHHHHHHHHHHHHHHHH----HHHcC---CeEEEEecccccCCCC-C--CC---CC----
Q 019060          103 HLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGL----AKRVG---ARILLTSTSEVYGDPL-V--HP---QD----  160 (346)
Q Consensus       103 ~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~---~r~i~~SS~~v~~~~~-~--~~---~~----  160 (346)
                      |+||...+.     ...++....+++|+.+...++++    +++.+   .++|++||...+-... .  .+   ..    
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            999975321     12345667889999997777554    44443   4999999986532100 0  00   00    


Q ss_pred             -------C--CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHH
Q 019060          161 -------E--SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI  227 (346)
Q Consensus       161 -------e--~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~  227 (346)
                             +  ..+.+.....+...|+.||.+.+...+.++++    .++.++.+.||.|................... .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~-~  239 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPP-F  239 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHH-H
Confidence                   0  00000012233467999999977777777665    36889999999996432111101111100000 0


Q ss_pred             cCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          228 RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       228 ~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ..  ..       ...+..+++.|+.++.++...
T Consensus       240 ~~--~~-------~~~~~~pe~~a~~~~~l~~~~  264 (308)
T PLN00015        240 QK--YI-------TKGYVSEEEAGKRLAQVVSDP  264 (308)
T ss_pred             HH--HH-------hcccccHHHhhhhhhhhcccc
Confidence            00  00       012457899999998877653

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.49  E-value=4.5e-13  Score=107.85  Aligned_cols=145  Identities=18%  Similarity=0.191  Sum_probs=108.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC--CCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY--FTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~--~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |+++||||+|.||+.++++|+++|.+.|+++.|+  .....+...++. ...++.++++|+.+.+..            .
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5799999999999999999999964688888886  111111111111 135788999999987443            5


Q ss_pred             CCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      +|++||++|........    +.....+..|+.+...+.+++...+. ++|++||....-                +...
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~  144 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR----------------GSPG  144 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS----------------SSTT
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc----------------CCCC
Confidence            99999999977643322    34567889999999999988887443 899999987652                3333


Q ss_pred             CCchHHhHHHHHHHHHHHHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ  193 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~  193 (346)
                      ...|+.+|...+.+.+.++++
T Consensus       145 ~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  145 MSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHh
Confidence            467999999999999988776

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.45  E-value=2.3e-12  Score=114.44  Aligned_cols=196  Identities=17%  Similarity=0.110  Sum_probs=118.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC----------CCCEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI----------EVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------~~d~v  101 (346)
                      .++|||+||||.+|+-+++.|+++| +.|.++.|....................+..+.......          ...++
T Consensus        79 ~~~VlVvGatG~vG~~iv~~llkrg-f~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v  157 (411)
T KOG1203|consen   79 PTTVLVVGATGKVGRRIVKILLKRG-FSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIV  157 (411)
T ss_pred             CCeEEEecCCCchhHHHHHHHHHCC-CeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccceeE
Confidence            4689999999999999999999999 999999996533322221011122333334333332111          23455


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc-----
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC-----  175 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~-----  175 (346)
                      +-+++...  ..+ +...-..+...+++++++||+.+|+ ||+++||...-.                ...+.+.     
T Consensus       158 ~~~~ggrp--~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~----------------~~~~~~~~~~~~  218 (411)
T KOG1203|consen  158 IKGAGGRP--EEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTK----------------FNQPPNILLLNG  218 (411)
T ss_pred             EecccCCC--Ccc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcc----------------cCCCchhhhhhh
Confidence            55554322  111 1222225678899999999999999 899999876532                1222222     


Q ss_pred             -hHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          176 -YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       176 -Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                       +-.+|+.+|+++    ++++++++|+|++...-......     ...    ....+-.  ...+..--.+.-.|+|+.+
T Consensus       219 ~~~~~k~~~e~~~----~~Sgl~ytiIR~g~~~~~~~~~~-----~~~----~~~~~~~--~~~~~~~~~i~r~~vael~  283 (411)
T KOG1203|consen  219 LVLKAKLKAEKFL----QDSGLPYTIIRPGGLEQDTGGQR-----EVV----VDDEKEL--LTVDGGAYSISRLDVAELV  283 (411)
T ss_pred             hhhHHHHhHHHHH----HhcCCCcEEEeccccccCCCCcc-----eec----ccCcccc--ccccccceeeehhhHHHHH
Confidence             347788888876    46799999999988764321100     000    1111111  1111111356678999999


Q ss_pred             HHHHhCCC
Q 019060          255 IRLMEGEN  262 (346)
Q Consensus       255 ~~~~~~~~  262 (346)
                      +.++.++.
T Consensus       284 ~~all~~~  291 (411)
T KOG1203|consen  284 AKALLNEA  291 (411)
T ss_pred             HHHHhhhh
Confidence            99888766

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.45  E-value=2.8e-12  Score=113.37  Aligned_cols=164  Identities=13%  Similarity=0.061  Sum_probs=111.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC---------CcchhhhhcC--CCCeeEEecccCCcccC---
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---------SKDNLRKWIG--HPRFELIRHDVTEPLLI---   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~~~~~~--~~~~~~~~~d~~~~~~~---   96 (346)
                      .+++++||||++.||.+++++|++.| +.|++++|+...         ..+...+.+.  ...+..+.+|+.+.+..   
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAG-ATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            36899999999999999999999999 999999986321         1111111111  12466789999987432   


Q ss_pred             ---------CCCEEEEcc-cCCC-----ccc---cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccc-cC
Q 019060           97 ---------EVDQIYHLA-CPAS-----PIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEV-YG  152 (346)
Q Consensus        97 ---------~~d~vi~~a-~~~~-----~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v-~~  152 (346)
                               ++|++||+| |...     ...   ...+....+++|+.+...+++++.    +.+ .++|++||... ++
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence                     599999999 6321     111   123345667888888777766553    332 48999998543 21


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCC
Q 019060          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGP  209 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~  209 (346)
                      .              .+......|+.+|.....+.+.++.+.   ++++..+.||.+-.+
T Consensus       166 ~--------------~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~  211 (305)
T PRK08303        166 A--------------THYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE  211 (305)
T ss_pred             C--------------cCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence            1              011123469999999999998877654   688999999877543

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.45  E-value=3.1e-12  Score=100.24  Aligned_cols=210  Identities=14%  Similarity=0.099  Sum_probs=139.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+.+..+||||+..||+++++.|.++| ++|.+.++......+....+.+..+-.-+.+|+.+....            .
T Consensus        12 ~~sk~~~vtGg~sGIGrAia~~la~~G-arv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   12 LMSKVAAVTGGSSGIGRAIAQLLAKKG-ARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HhcceeEEecCCchHHHHHHHHHHhcC-cEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            346789999999999999999999999 999999887654433333333333455688998876432            4


Q ss_pred             CCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHHc-------CCeEEEEecccc-cCCCCCCCCCCCCcC
Q 019060           98 VDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKRV-------GARILLTSTSEV-YGDPLVHPQDESYWG  165 (346)
Q Consensus        98 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-------~~r~i~~SS~~v-~~~~~~~~~~e~~~~  165 (346)
                      ++++++|||+.-..    ...+++++.+.+|+.+...+-+++.+.       +.++|.+||.-- .|+            
T Consensus        91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN------------  158 (256)
T KOG1200|consen   91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN------------  158 (256)
T ss_pred             CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc------------
Confidence            99999999986543    245688999999999998887766543       237999999742 221            


Q ss_pred             CCCCCCCCCchHHhHHHHHHH----HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          166 NVNPIGVRSCYDEGKRVAETL----MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~----~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                           .....|+.+|.-.--+    .++.++ .++++..+.||+|-.|.-    ..+.+..+..+...-++..       
T Consensus       159 -----~GQtnYAAsK~GvIgftktaArEla~-knIrvN~VlPGFI~tpMT----~~mp~~v~~ki~~~iPmgr-------  221 (256)
T KOG1200|consen  159 -----FGQTNYAASKGGVIGFTKTAARELAR-KNIRVNVVLPGFIATPMT----EAMPPKVLDKILGMIPMGR-------  221 (256)
T ss_pred             -----ccchhhhhhcCceeeeeHHHHHHHhh-cCceEeEeccccccChhh----hhcCHHHHHHHHccCCccc-------
Confidence                 1112355554332222    222223 389999999999988752    2233455555554444443       


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                        +-..+|+|..++.+.....    +..+.+.++
T Consensus       222 --~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  222 --LGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             --cCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence              3356899999988875433    335666554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.44  E-value=9e-12  Score=105.52  Aligned_cols=160  Identities=19%  Similarity=0.171  Sum_probs=122.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------------   96 (346)
                      ..+-|||||+-...|+.|+++|.+.| +.|.+-+-.. +..+.+.....+++...+..|+++++++              
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~G-f~V~Agcl~~-~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKG-FRVFAGCLTE-EGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcC-CEEEEEeecC-chHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            35779999999999999999999999 9999888432 3334444444467889999999998654              


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +...||||||......     ..+++.+.+++|+.|+.++..+.    +++..|+|++||..--                
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR----------------  169 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR----------------  169 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC----------------
Confidence            5899999999543221     23578889999999988877654    5566699999997531                


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~  209 (346)
                      .+.....+|+.||.+.|.+...+.++   .|+.+.++-|| +|-.
T Consensus       170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T  213 (322)
T KOG1610|consen  170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT  213 (322)
T ss_pred             ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence            12333467999999999998877665   48999999998 4443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.44  E-value=1.2e-11  Score=106.60  Aligned_cols=218  Identities=15%  Similarity=0.113  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcc------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPL------------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~------------   94 (346)
                      .+|.++|||++..||++++++|.+.| .+|++..|+.....+....+..    ...+..+.+|+.+..            
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~G-a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAG-AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999 9999999975443333332221    235778999998753            


Q ss_pred             -cCCCCEEEEcccCCCcc-----ccccChHHHHHHHHHH-HHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCC
Q 019060           95 -LIEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIG-TLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        95 -~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~-~~~l~~~~~~~----~~-r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                       +-++|++|++||.....     ...+.++..+++|+.+ ...+..++...    +. .++++||...+..         
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~---------  156 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP---------  156 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---------
Confidence             23699999999966533     2345677888999994 55555544322    23 6888888765421         


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc-cHHHHHHHHHHcCCCeEEecCC
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                           .+..+ ..|+.+|...+.+.+..+.+   .++++..+-||.|..+....... .....+.........++     
T Consensus       157 -----~~~~~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-----  225 (270)
T KOG0725|consen  157 -----GPGSG-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-----  225 (270)
T ss_pred             -----CCCCc-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-----
Confidence                 11122 57999999999999988765   37899999999988775110000 00111111100111111     


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                        .-.+.-.+|++..++.++....    +..+.+.++
T Consensus       226 --~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG  260 (270)
T KOG0725|consen  226 --LGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGG  260 (270)
T ss_pred             --cCCccCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence              1246678999999998887643    334444444

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.42  E-value=7.5e-12  Score=105.89  Aligned_cols=159  Identities=7%  Similarity=0.014  Sum_probs=109.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------C-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------I-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~-   96 (346)
                      .+++++||||++.||++++++|.++| +.|+++.|+.....+...+... ...+..+.+|+.+.+.            . 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G-~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLG-ATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 9999998864332222211111 1346678889887632            2 


Q ss_pred             CCCEEEEcccCCCcc-cc----ccChHHHHHHHHHHHHHHHH----HHHHcC--CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 EVDQIYHLACPASPI-FY----KYNPVKTIKTNVIGTLNMLG----LAKRVG--ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-~~----~~~~~~~~~~n~~~~~~l~~----~~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      ++|++||+||..... ..    .++..+.+..|+.+...+++    .+++.+  ..+|++||...+              
T Consensus        83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~--------------  148 (227)
T PRK08862         83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH--------------  148 (227)
T ss_pred             CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC--------------
Confidence            589999999743221 11    12334456667776665544    343333  389999985422              


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~  209 (346)
                         +  ....|+.+|...+.+.+.++.+   .++++..+.||.+-.+
T Consensus       149 ---~--~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 ---Q--DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ---C--CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence               1  1246999999999998887765   4799999999887765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.42  E-value=3.1e-12  Score=101.21  Aligned_cols=158  Identities=20%  Similarity=0.200  Sum_probs=116.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+.+||||||+..||..|++++++.| .+|++..|+.    +.+.+.. ..+.+.-..||+.|.++.            .
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elg-N~VIi~gR~e----~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELG-NTVIICGRNE----ERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhC-CEEEEecCcH----HHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCc
Confidence            46799999999999999999999999 9999999853    3333322 246778889999997643            4


Q ss_pred             CCEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           98 VDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      .+++|+|||......      ..++..+.+.+|+.++.++..++.    +.. .-+|.+||.-.|               
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLaf---------------  143 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAF---------------  143 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccccc---------------
Confidence            999999999764322      223346677889988888876653    333 379999998776               


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~  209 (346)
                       .|......|..+|.+...+...++++   .++++.=+-|+.|--+
T Consensus       144 -vPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         144 -VPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -CcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence             34444567999999999987766554   3567777777766543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.42  E-value=4.6e-11  Score=104.83  Aligned_cols=213  Identities=12%  Similarity=0.057  Sum_probs=131.5

Q ss_pred             CCCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh----------cCC----CCeeEEeccc--C
Q 019060           30 QSNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW----------IGH----PRFELIRHDV--T   91 (346)
Q Consensus        30 ~~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~----------~~~----~~~~~~~~d~--~   91 (346)
                      ..+|++|||||  +..||..+++.|.+.| .+|++ .|..+.........          ...    .....+.+|+  .
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~G-a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAG-AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCC-CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            35789999999  8999999999999999 88877 44321110000000          000    1134567777  2


Q ss_pred             Ccc------------------c------------CCCCEEEEcccCCC----c--cccccChHHHHHHHHHHHHHHHHHH
Q 019060           92 EPL------------------L------------IEVDQIYHLACPAS----P--IFYKYNPVKTIKTNVIGTLNMLGLA  135 (346)
Q Consensus        92 ~~~------------------~------------~~~d~vi~~a~~~~----~--~~~~~~~~~~~~~n~~~~~~l~~~~  135 (346)
                      +.+                  .            .++|++|||||...    +  ....++....+++|+.+...+.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            222                  1            14999999997432    1  1123567888999999999888776


Q ss_pred             HHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhHHHHHHHHHHHHHHh----CCceEEEEecccc
Q 019060          136 KRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTY  207 (346)
Q Consensus       136 ~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~----~~~~~ivR~~~i~  207 (346)
                      ...   +.++|++||.....                +.... ..|+.+|...+.+.+.++.+.    ++++..|.||.+-
T Consensus       165 ~p~m~~~G~II~isS~a~~~----------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~  228 (303)
T PLN02730        165 GPIMNPGGASISLTYIASER----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG  228 (303)
T ss_pred             HHHHhcCCEEEEEechhhcC----------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCcc
Confidence            432   24899999976431                11111 259999999999999888753    5789999998887


Q ss_pred             CCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       208 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      .+.... .. ............  .+.       ..+...+|++.+++.++....   .| .+.+.++
T Consensus       229 T~~~~~-~~-~~~~~~~~~~~~--~pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        229 SRAAKA-IG-FIDDMIEYSYAN--APL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             Cchhhc-cc-ccHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            653210 00 001111111111  110       134578999999999987433   33 4544443

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.41  E-value=4e-13  Score=103.39  Aligned_cols=169  Identities=18%  Similarity=0.153  Sum_probs=116.5

Q ss_pred             hhccCCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-----cccCCCC
Q 019060           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-----PLLIEVD   99 (346)
Q Consensus        26 ~~~~~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~d   99 (346)
                      ++..+.+|..+|.||||-.|+.|.+++.+.+. .+|+++.|..+..++.      ...+.....|...     ....++|
T Consensus        12 EDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~qg~d   85 (238)
T KOG4039|consen   12 EDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQGPD   85 (238)
T ss_pred             HHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhcCCc
Confidence            34445578999999999999999999999986 4788887754222221      1233333444332     3455899


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      +.|++.|.+-...   ..+..+.+.-....++.++|++.|+ +|+.+||..+-                  +.....|..
T Consensus        86 V~FcaLgTTRgka---GadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd------------------~sSrFlY~k  144 (238)
T KOG4039|consen   86 VLFCALGTTRGKA---GADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGAD------------------PSSRFLYMK  144 (238)
T ss_pred             eEEEeeccccccc---ccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCC------------------cccceeeee
Confidence            9999887543211   1233445556667788999999998 79999998752                  223456999


Q ss_pred             hHHHHHHHHHHHHHHhCC-ceEEEEeccccCCCCCCCCccHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQ  225 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~-~~~ivR~~~i~G~~~~~~~~~~~~~~~~~  225 (346)
                      .|.+.|+-+.++    ++ .++|+|||.+.|....+.-+.|+.++...
T Consensus       145 ~KGEvE~~v~eL----~F~~~~i~RPG~ll~~R~esr~geflg~~~~a  188 (238)
T KOG4039|consen  145 MKGEVERDVIEL----DFKHIIILRPGPLLGERTESRQGEFLGNLTAA  188 (238)
T ss_pred             ccchhhhhhhhc----cccEEEEecCcceecccccccccchhhheehh
Confidence            999999988654    33 58999999999987665555555554433

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.39  E-value=1.7e-12  Score=111.08  Aligned_cols=205  Identities=20%  Similarity=0.194  Sum_probs=139.1

Q ss_pred             cCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------------CCCCEEEE
Q 019060           39 GGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------------IEVDQIYH  103 (346)
Q Consensus        39 G~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------------~~~d~vi~  103 (346)
                      |++  +.||+.++++|+++| +.|++++|+.......+.+.......+.+.+|+.+.+.             .++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~G-a~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEG-ANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTT-EEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  999999999999999 99999999754332334443333345579999998632             36999999


Q ss_pred             cccCCCc----cc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          104 LACPASP----IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       104 ~a~~~~~----~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      +++....    ..    ..++....++.|+.+...+++++.+.   +.++|++||.....                +...
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~----------------~~~~  143 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR----------------PMPG  143 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS----------------BSTT
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc----------------cCcc
Confidence            9987654    11    22456778899999999888877442   23799999886532                2222


Q ss_pred             CCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ...|+.+|...+.+.+.++.+    .++++.+|.||.+..+....  ......+.......-++         ..+...+
T Consensus       144 ~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~--~~~~~~~~~~~~~~~pl---------~r~~~~~  212 (241)
T PF13561_consen  144 YSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER--IPGNEEFLEELKKRIPL---------GRLGTPE  212 (241)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH--HHTHHHHHHHHHHHSTT---------SSHBEHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc--cccccchhhhhhhhhcc---------CCCcCHH
Confidence            347999999999999887654    47899999998887652100  00012233333322222         1355889


Q ss_pred             HHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          249 DMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       249 Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      |+|++++.++....   .| ++.+.+|
T Consensus       213 evA~~v~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  213 EVANAVLFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHHHHHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHHHHHHHhCccccCccCCeEEECCC
Confidence            99999999998653   44 5555544

...

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.38  E-value=1.2e-11  Score=108.27  Aligned_cols=174  Identities=18%  Similarity=0.132  Sum_probs=125.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++|||||+.||.+++++|..+| ..|+..+|+.....+...++..   ...+.++++|+.+..++           
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~G-a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRG-AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            45899999999999999999999999 9999999976433333333332   34678899999997554           


Q ss_pred             -CCCEEEEcccCCCccc--cccChHHHHHHHHHHHHHHHHH----HHHcC-CeEEEEecccccCCCC-CCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGL----AKRVG-ARILLTSTSEVYGDPL-VHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~r~i~~SS~~v~~~~~-~~~~~e~~~~~~  167 (346)
                       ..|++|+|||.+.+..  ..+..+..+.+|..+...+.+.    ++... .|+|++||..-..... .....|.     
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~-----  187 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEK-----  187 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchh-----
Confidence             5999999999876544  3345788889998877766554    55555 5999999976411001 1111111     


Q ss_pred             CC-CCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCC
Q 019060          168 NP-IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPR  210 (346)
Q Consensus       168 ~~-~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~  210 (346)
                      .. ......|+.||.+...+..+++++.  ++.+..+-||.+..+.
T Consensus       188 ~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~  233 (314)
T KOG1208|consen  188 AKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG  233 (314)
T ss_pred             ccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence            11 2222359999999999998888776  5889999999888764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.34  E-value=4.7e-11  Score=102.77  Aligned_cols=160  Identities=21%  Similarity=0.197  Sum_probs=114.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcC-C--CCeeEEecccCC-cccC---------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-H--PRFELIRHDVTE-PLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~-~--~~~~~~~~d~~~-~~~~---------   96 (346)
                      .+|+||||||++.||..+++.|.+.| +.|+++.|..... .+....... .  ..+.+..+|+++ ....         
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREG-ARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999 9988887754321 111111111 1  246778899997 4322         


Q ss_pred             ---CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 ---EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                         ++|++||+||.....     ...+.....+++|+.+...+.+++...-.  ++|++||.... ..            
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~------------  149 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG------------  149 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC------------
Confidence               499999999975421     12356678889999988888775554444  89999998753 21            


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEecccc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTY  207 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~  207 (346)
                        +.. ...|+.+|.+.+.+.+.++.+   .++.+..+.||.+-
T Consensus       150 --~~~-~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         150 --PPG-QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             --CCC-cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence              110 256999999999998887754   47889999999554

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.33  E-value=2.2e-11  Score=104.11  Aligned_cols=188  Identities=14%  Similarity=0.132  Sum_probs=122.1

Q ss_pred             HHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC---------CCCEEEEcccCCCccccccChH
Q 019060           48 LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---------EVDQIYHLACPASPIFYKYNPV  118 (346)
Q Consensus        48 l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~d~vi~~a~~~~~~~~~~~~~  118 (346)
                      ++++|+++| ++|++++|+....          ....++++|+.+.+..         ++|+|||+||...    .....
T Consensus         1 ~a~~l~~~G-~~Vv~~~r~~~~~----------~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~~~~   65 (241)
T PRK12428          1 TARLLRFLG-ARVIGVDRREPGM----------TLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TAPVE   65 (241)
T ss_pred             ChHHHHhCC-CEEEEEeCCcchh----------hhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CCCHH
Confidence            478899999 9999999864321          0134678898876432         5899999998653    24577


Q ss_pred             HHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC-----------cCCCCCCCCCCchHHhHHHHH
Q 019060          119 KTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY-----------WGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       119 ~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~-----------~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      ..+++|+.++..+++++...   +.++|++||...++.....+..+..           +....+..+...|+.+|...+
T Consensus        66 ~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~  145 (241)
T PRK12428         66 LVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALI  145 (241)
T ss_pred             HhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHH
Confidence            88999999999999988653   2499999999887632211111110           000013334467999999999


Q ss_pred             HHHHHHH-H---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          185 TLMFDYH-R---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       185 ~~~~~~~-~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      .+.+.++ .   ..++++++++||.+.++....    .....-.........+       ...+...+|+|++++.++..
T Consensus       146 ~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~  214 (241)
T PRK12428        146 LWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD----FRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSD  214 (241)
T ss_pred             HHHHHHHHHhhhccCeEEEEeecCCccCccccc----chhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcCh
Confidence            9988877 3   347999999999998874221    0000000000000000       11356789999999998864


Q ss_pred             C
Q 019060          261 E  261 (346)
Q Consensus       261 ~  261 (346)
                      .
T Consensus       215 ~  215 (241)
T PRK12428        215 A  215 (241)
T ss_pred             h
Confidence            3

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.27  E-value=2.5e-11  Score=96.55  Aligned_cols=154  Identities=18%  Similarity=0.195  Sum_probs=111.1

Q ss_pred             CCEEEEEcC-chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------------C
Q 019060           32 NMRILVTGG-AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------------E   97 (346)
Q Consensus        32 ~~~ilItG~-tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------------~   97 (346)
                      .++|||||+ +|.||.+|++++.++| +.|++..|..    +....+....++...+.|+.+++.+             +
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G-~~V~AtaR~~----e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNG-YLVYATARRL----EPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCC-eEEEEEcccc----chHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            468999976 5999999999999999 9999998853    3333333345788899999987543             4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      .|.++++||..-...    ...+-++.+++|+-|..++.++...    ....+|++.|..++                -|
T Consensus        82 ld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~----------------vp  145 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV----------------VP  145 (289)
T ss_pred             eEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE----------------ec
Confidence            999999998532111    2234577889999988887776643    33479999999877                35


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNT  206 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i  206 (346)
                      ......|..||++...+.+-++-+   .+++++.+-+|.|
T Consensus       146 fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv  185 (289)
T KOG1209|consen  146 FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGV  185 (289)
T ss_pred             cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccce
Confidence            555578999999999887655432   2455555555443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.23  E-value=2e-10  Score=93.56  Aligned_cols=154  Identities=20%  Similarity=0.214  Sum_probs=103.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc---chhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++|||||+|.||..+++.|.+++...|+++.|+.....   ..+.++.. ...+.++.+|++|++..            .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            68999999999999999999999668999999732111   12222221 23688899999986432            5


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccc-cCCCCCCCCCCCCcCCCCCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      ++.|||+|+.......    .++....+..-+.++.++.+++..... .||++||... +|.                 .
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~-----------------~  144 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG-----------------P  144 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT------------------T
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC-----------------c
Confidence            8999999997543322    234556677889999999999988777 7899999774 553                 1


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEecc
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN  205 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~  205 (346)
                      ....|+.+-...+.+.+.... .+.+++.+..+.
T Consensus       145 gq~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~  177 (181)
T PF08659_consen  145 GQSAYAAANAFLDALARQRRS-RGLPAVSINWGA  177 (181)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred             chHhHHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence            235699999999998887654 478888877643

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.21  E-value=1.4e-10  Score=93.59  Aligned_cols=206  Identities=20%  Similarity=0.202  Sum_probs=132.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch---hhhhcCCCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---LRKWIGHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++.+++|||.|.||+.++++|++.| -.+.++.-+.. +.+.   +........+-|+++|+++....            
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kg-ik~~~i~~~~E-n~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKG-IKVLVIDDSEE-NPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcC-chheeehhhhh-CHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            7899999999999999999999999 55554443221 2222   22333455788999999986433            


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHH----HHHHHHHc-CC---eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLN----MLGLAKRV-GA---RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~----l~~~~~~~-~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      .+|++||.||...    +.+.+..+.+|+.+..+    .+..+.+. |.   -+|..||..-+                +
T Consensus        83 ~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL----------------~  142 (261)
T KOG4169|consen   83 TIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL----------------D  142 (261)
T ss_pred             ceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc----------------C
Confidence            4999999998765    56788888889776655    44555433 22   58999997654                3


Q ss_pred             CCCCCCchHHhHHHHHHHHHH-----HHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHc-CCCeEEecC---Cc
Q 019060          169 PIGVRSCYDEGKRVAETLMFD-----YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR-GEPLTVQAP---GT  239 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~-----~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~  239 (346)
                      |..-...|+.||...--+-++     +.+++|+++..++||.+-            ..++..+.. +.-+..-..   .-
T Consensus       143 P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~------------t~l~~~~~~~~~~~e~~~~~~~~l  210 (261)
T KOG4169|consen  143 PMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTR------------TDLAENIDASGGYLEYSDSIKEAL  210 (261)
T ss_pred             ccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcch------------HHHHHHHHhcCCcccccHHHHHHH
Confidence            444446799999877666555     345568999999996542            111111111 111110000   00


Q ss_pred             ceeecccHHHHHHHHHHHHhCCCCCc-EEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGENTGP-INIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~~~~-~~~~~~  271 (346)
                      .+..--...++++.++.+++.+.+|. |-+..+
T Consensus       211 ~~~~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  211 ERAPKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             HHcccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            01123356789999999999887664 555443

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.21  E-value=2.5e-09  Score=93.93  Aligned_cols=213  Identities=10%  Similarity=0.019  Sum_probs=126.3

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCC-------CCCcchhh--------------hhc----CCCCe
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYF-------TGSKDNLR--------------KWI----GHPRF   83 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~-------~~~~~~~~--------------~~~----~~~~~   83 (346)
                      .+|+++|||++  ..||+++++.|.++| .+|++.++..       ........              +..    .....
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~G-a~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~   85 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAG-ATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTP   85 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCC-CEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCC
Confidence            47899999995  899999999999999 9998865421       00000000              000    00011


Q ss_pred             eEEecccCCc--------------------ccCCCCEEEEcccCCCc--c----ccccChHHHHHHHHHHHHHHHHHHHH
Q 019060           84 ELIRHDVTEP--------------------LLIEVDQIYHLACPASP--I----FYKYNPVKTIKTNVIGTLNMLGLAKR  137 (346)
Q Consensus        84 ~~~~~d~~~~--------------------~~~~~d~vi~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~  137 (346)
                      +-+.+|+.+.                    ...++|++|||||....  .    ...+++...+++|+.+...+.+++..
T Consensus        86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p  165 (299)
T PRK06300         86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP  165 (299)
T ss_pred             EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            1122222220                    11259999999975321  1    12345678889999999999887754


Q ss_pred             c---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhHHHHHHHHHHHHHHh----CCceEEEEeccccCC
Q 019060          138 V---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGP  209 (346)
Q Consensus       138 ~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~----~~~~~ivR~~~i~G~  209 (346)
                      .   +.++|.+||.....                +.... ..|+.+|...+.+.+.++.+.    ++++..|.||.+-.+
T Consensus       166 ~m~~~G~ii~iss~~~~~----------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~  229 (299)
T PRK06300        166 IMNPGGSTISLTYLASMR----------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASR  229 (299)
T ss_pred             HhhcCCeEEEEeehhhcC----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccCh
Confidence            2   23788888865421                11111 259999999999999888753    688999999988655


Q ss_pred             CCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..... . ............  .+.       ..+...+|++.+++.++....   .| .+.+.++
T Consensus       230 ~~~~~-~-~~~~~~~~~~~~--~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        230 AGKAI-G-FIERMVDYYQDW--APL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             hhhcc-c-ccHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            31100 0 001111111111  111       135578999999999887532   33 4555443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.15  E-value=7.6e-10  Score=119.48  Aligned_cols=163  Identities=18%  Similarity=0.116  Sum_probs=118.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc--------------------------------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--------------------------------------   71 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--------------------------------------   71 (346)
                      ..++++|||||+|.||..++++|.+++...|++++|+.....                                      
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            357899999999999999999999984389999998721000                                      


Q ss_pred             -----ch----hhhhcC-CCCeeEEecccCCcccC-----------CCCEEEEcccCCCccc----cccChHHHHHHHHH
Q 019060           72 -----DN----LRKWIG-HPRFELIRHDVTEPLLI-----------EVDQIYHLACPASPIF----YKYNPVKTIKTNVI  126 (346)
Q Consensus        72 -----~~----~~~~~~-~~~~~~~~~d~~~~~~~-----------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~  126 (346)
                           ..    +..+.. ...+.++.+|++|...+           ++|.|||+||......    ..++....+++|+.
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~ 2154 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVD 2154 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHH
Confidence                 00    000000 12577899999996432           5999999999754322    33567788999999


Q ss_pred             HHHHHHHHHHHcCC-eEEEEecccc-cCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh-CCceEEEEe
Q 019060          127 GTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARI  203 (346)
Q Consensus       127 ~~~~l~~~~~~~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ivR~  203 (346)
                      ++.++++++..... +||++||... +|.                 .....|+.+|.....+.+.++.+. +++++.+.+
T Consensus      2155 G~~~Ll~al~~~~~~~IV~~SSvag~~G~-----------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~w 2217 (2582)
T TIGR02813      2155 GLLSLLAALNAENIKLLALFSSAAGFYGN-----------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNW 2217 (2582)
T ss_pred             HHHHHHHHHHHhCCCeEEEEechhhcCCC-----------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEEC
Confidence            99999999877654 7999999875 332                 123469999999999888877664 577888888


Q ss_pred             ccccCC
Q 019060          204 FNTYGP  209 (346)
Q Consensus       204 ~~i~G~  209 (346)
                      |.+-+.
T Consensus      2218 G~wdtg 2223 (2582)
T TIGR02813      2218 GPWDGG 2223 (2582)
T ss_pred             CeecCC
Confidence            776554

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.09  E-value=2.4e-09  Score=86.48  Aligned_cols=162  Identities=19%  Similarity=0.104  Sum_probs=108.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhh-hcCCCCeeEEecccCCcccC--------------
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRK-WIGHPRFELIRHDVTEPLLI--------------   96 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~~~~d~~~~~~~--------------   96 (346)
                      +.|+||||+..||-.|+++|++....++++..|..++. ...+.. ...++++..++.|+++.++.              
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            46999999999999999999987645665555543332 222222 22468999999999986443              


Q ss_pred             CCCEEEEcccCCCcccc-----ccChHHHHHHHHHHHHHHHHHH----HHc---------CC---eEEEEecccccCCCC
Q 019060           97 EVDQIYHLACPASPIFY-----KYNPVKTIKTNVIGTLNMLGLA----KRV---------GA---RILLTSTSEVYGDPL  155 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~---------~~---r~i~~SS~~v~~~~~  155 (346)
                      +.+.+|++||....-..     .......+++|..+...+.+++    ++.         .+   .+|++||...--   
T Consensus        84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~---  160 (249)
T KOG1611|consen   84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI---  160 (249)
T ss_pred             CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc---
Confidence            69999999996543221     2234567788888777766643    221         12   488898865320   


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEecccc
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTY  207 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~  207 (346)
                      +.          ....+...|..||.+.-.+.+..+-+.   ++-++.+.||+|-
T Consensus       161 ~~----------~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~  205 (249)
T KOG1611|consen  161 GG----------FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ  205 (249)
T ss_pred             CC----------CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence            00          234455789999999999888776553   4556777777764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.08  E-value=3.6e-09  Score=89.73  Aligned_cols=200  Identities=20%  Similarity=0.189  Sum_probs=132.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCccc------------CC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLL------------IE   97 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~------------~~   97 (346)
                      .+|+||||+..+|..++..+..+| +.|+++.|+..+-.+....+-   ...++.+..+|+.+.+.            .-
T Consensus        34 ~hi~itggS~glgl~la~e~~~~g-a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~  112 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREG-ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP  112 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHcc-CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence            689999999999999999999999 999999997544333222221   12336688899866432            24


Q ss_pred             CCEEEEcccCCCcccccc----ChHHHHHHHHHHHHHHHHHHHH----cCC--eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIFYKY----NPVKTIKTNVIGTLNMLGLAKR----VGA--RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~----~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|.+|+|||...+....+    .....+++|..++.+++.++..    ...  +++.+||....                
T Consensus       113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~----------------  176 (331)
T KOG1210|consen  113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM----------------  176 (331)
T ss_pred             cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh----------------
Confidence            999999999876655443    4466788999999998876533    221  78888887642                


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      -+....+.|..+|.+.-.+.....++   +++.++..-|+.+-.|+..-      ++..    +-....+...+   .+.
T Consensus       177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~------En~t----kP~~t~ii~g~---ss~  243 (331)
T KOG1210|consen  177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFER------ENKT----KPEETKIIEGG---SSV  243 (331)
T ss_pred             cCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccc------cccc----CchheeeecCC---CCC
Confidence            13344466888888777666655544   36788888888877775221      1110    00111111111   245


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~  262 (346)
                      +..+++|.+++.-+.+..
T Consensus       244 ~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  244 IKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             cCHHHHHHHHHhHHhhcC
Confidence            788999999998777543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.07  E-value=1.5e-10  Score=89.21  Aligned_cols=200  Identities=19%  Similarity=0.176  Sum_probs=136.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CC-CeeEEecccCCcccC--------CCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP-RFELIRHDVTEPLLI--------EVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~--------~~d~  100 (346)
                      .++.|++||+.-.||+.+++.|.+.| .+|+++.|+.    +.+.++.. .+ .+..+.+|+.+-+..        -+|.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aG-A~ViAvaR~~----a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAG-AQVIAVARNE----ANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcC-CEEEEEecCH----HHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            46899999999999999999999999 9999999843    44443332 23 378899999875322        3899


Q ss_pred             EEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC--eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          101 IYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       101 vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      ++++||......    ..++.+..+++|+.+..++.+...+    ..+  -++.+||.+..                .+.
T Consensus        81 LVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~----------------R~~  144 (245)
T KOG1207|consen   81 LVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASI----------------RPL  144 (245)
T ss_pred             hhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcc----------------ccc
Confidence            999999654322    2345666778999988888776332    233  59999998753                244


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhC---CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHG---IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~---~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .-.+.|..+|.+...+.+.++-+.+   +++..+.|..+.-.....       +|-.-...++.+...    ..-.|.-+
T Consensus       145 ~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~d-------nWSDP~K~k~mL~ri----Pl~rFaEV  213 (245)
T KOG1207|consen  145 DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRD-------NWSDPDKKKKMLDRI----PLKRFAEV  213 (245)
T ss_pred             CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEeccccc-------ccCCchhccchhhhC----chhhhhHH
Confidence            4557899999999999888877754   678888888876432110       111111111111100    11246788


Q ss_pred             HHHHHHHHHHHhCCC
Q 019060          248 SDMVDGLIRLMEGEN  262 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~  262 (346)
                      +.+++++..++....
T Consensus       214 ~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  214 DEVVNAVLFLLSDNS  228 (245)
T ss_pred             HHHHhhheeeeecCc
Confidence            999999999887654

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.89  E-value=3.2e-08  Score=87.08  Aligned_cols=170  Identities=13%  Similarity=0.011  Sum_probs=111.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-CCCeeEEe-cccCC--cccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-HPRFELIR-HDVTE--PLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~d~~~--~~~~~~d~vi~~a  105 (346)
                      .++||+|+|+.|.||+.++..|...+. .+++++++..  .......+.. ........ .|..+  ....+.|+||+++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita   84 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA   84 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence            456999999999999999999986653 6899998832  1111111111 11222221 12112  3456899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC--CCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |...  ....+....+..|+..+.++++++++.+. ++|+++|-.+-.-..-.  ...+.     ....|...||.+-..
T Consensus        85 G~~~--~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~-----sg~p~~~viG~g~LD  157 (321)
T PTZ00325         85 GVPR--KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKA-----GVYDPRKLFGVTTLD  157 (321)
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhc-----cCCChhheeechhHH
Confidence            8643  23356778899999999999999999998 89999986642211000  00111     345566778887555


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      .-++-...++..++...-++ +.|+|.+
T Consensus       158 s~R~r~~la~~l~v~~~~V~-~~VlGeH  184 (321)
T PTZ00325        158 VVRARKFVAEALGMNPYDVN-VPVVGGH  184 (321)
T ss_pred             HHHHHHHHHHHhCcChhheE-EEEEeec
Confidence            55666666777788877777 7888865

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.84  E-value=8.7e-09  Score=83.07  Aligned_cols=95  Identities=15%  Similarity=0.140  Sum_probs=68.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-hcCCCCeeEEecccCCcccC------------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-WIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      |+++|||||||+|. +++.|.+.| ++|.+++|+... ...+.. ......+..+.+|+.|.+..            .+|
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G-~~V~v~~R~~~~-~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKG-FHVSVIARREVK-LENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCc-CEEEEEECCHHH-HHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            68999999998876 999999999 999999885322 111211 11223577889999986443            477


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCe-----EEEEecc
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-----ILLTSTS  148 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-----~i~~SS~  148 (346)
                      .+|+.+                  .+.+..++..+|++.+++     |+++=..
T Consensus        78 ~lv~~v------------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs  113 (177)
T PRK08309         78 LAVAWI------------------HSSAKDALSVVCRELDGSSETYRLFHVLGS  113 (177)
T ss_pred             EEEEec------------------cccchhhHHHHHHHHccCCCCceEEEEeCC
Confidence            888655                  345688899999998865     8876543

>PRK06720 hypothetical protein; Provisional

Probab=98.83  E-value=3.3e-08  Score=79.20  Aligned_cols=78  Identities=18%  Similarity=0.139  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~~   97 (346)
                      .++.++||||+|.||+.+++.|.+.| ++|.+++|+.........+... ...+.++.+|+.+...            .+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQG-AKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999 9999998864322111122111 2346678999987532            25


Q ss_pred             CCEEEEcccCCC
Q 019060           98 VDQIYHLACPAS  109 (346)
Q Consensus        98 ~d~vi~~a~~~~  109 (346)
                      +|++||+||...
T Consensus        94 iDilVnnAG~~~  105 (169)
T PRK06720         94 IDMLFQNAGLYK  105 (169)
T ss_pred             CCEEEECCCcCC
Confidence            999999999654

>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A

Probab=98.79  E-value=1.2e-08  Score=66.47  Aligned_cols=58  Identities=26%  Similarity=0.418  Sum_probs=39.6

Q ss_pred             HHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHh
Q 019060          282 NVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       282 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      ++.++.|+++++.+.+..+.++...+.|.+|++++|||+|+++++++++++.+|++++
T Consensus         1 A~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~n   58 (62)
T PF13950_consen    1 AFEKVTGKKIPVEYAPRRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKN   58 (62)
T ss_dssp             HHHHHHTS---EEEE---TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHS
T ss_pred             CcHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHC
Confidence            4678899999999999999999999999999999999999999999999999998664

...

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.79  E-value=9.6e-09  Score=83.07  Aligned_cols=194  Identities=13%  Similarity=0.045  Sum_probs=122.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEe--------cccCCcc--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR--------HDVTEPL--------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--------~d~~~~~--------   94 (346)
                      +++-|||||+|..||..++..+++.+ .+.....++.+..+        .+++....        +|++...        
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed-~e~~r~g~~r~~a~--------~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~   75 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAED-DEALRYGVARLLAE--------LEGLKVAYGDDFVHVVGDITEEQLLGALREA   75 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcc-hHHHHHhhhccccc--------ccceEEEecCCcceechHHHHHHHHHHHHhh
Confidence            45679999999999999999999998 55433332221111        12233333        3333221        


Q ss_pred             ----cCCCCEEEEcccCCCccc-------cccChHHHHHHHHHHHHHHHHHHH----HcCC--eEEEEecccccCCCCCC
Q 019060           95 ----LIEVDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLAK----RVGA--RILLTSTSEVYGDPLVH  157 (346)
Q Consensus        95 ----~~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~--r~i~~SS~~v~~~~~~~  157 (346)
                          ..+-|+||||||...+..       ....++.+++.|+.+...+...+.    +...  .+|++||.+.-      
T Consensus        76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav------  149 (253)
T KOG1204|consen   76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV------  149 (253)
T ss_pred             hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh------
Confidence                125999999999654322       224578899999988888776553    3332  58999997754      


Q ss_pred             CCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCC-----CccHHHHHHHHHHcCC
Q 019060          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNID-----DGRVVSNFIAQAIRGE  230 (346)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~-----~~~~~~~~~~~~~~~~  230 (346)
                                .|......|+.+|++-+.+.+.++.+-  ++.++.++||.+--+.....     ...-...+++......
T Consensus       150 ----------~p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~  219 (253)
T KOG1204|consen  150 ----------RPFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESG  219 (253)
T ss_pred             ----------ccccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcC
Confidence                      355566789999999999999887653  67888999987754321100     1111122222222222


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                                  .++...+-|+.+..++++.
T Consensus       220 ------------~ll~~~~~a~~l~~L~e~~  238 (253)
T KOG1204|consen  220 ------------QLLDPQVTAKVLAKLLEKG  238 (253)
T ss_pred             ------------CcCChhhHHHHHHHHHHhc
Confidence                        3556677888888887754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.79  E-value=2.7e-08  Score=84.66  Aligned_cols=162  Identities=14%  Similarity=0.097  Sum_probs=110.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC--CCeeEEecccCCccc-----------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLL-----------IEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~-----------~~~   98 (346)
                      +.=..|||||..||++.+++|.++| ..|+++.|+..+.....++....  -.++.+..|.++...           .++
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG-~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRG-FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence            4568899999999999999999999 99999999765444333333322  347788888887652           258


Q ss_pred             CEEEEcccCCC--cccccc----ChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPAS--PIFYKY----NPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~--~~~~~~----~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      -++|||+|...  |....+    .....+.+|+.++..+.+..    .+.+. -+|++||.+.-                
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----------------  191 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----------------  191 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------------
Confidence            89999999765  222222    22345567777665555443    33232 69999987642                


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPR  210 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~  210 (346)
                      .|..-...|+.+|...+.+...+..++   ++.+-.+-|..|-.+.
T Consensus       192 ~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm  237 (312)
T KOG1014|consen  192 IPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM  237 (312)
T ss_pred             ccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence            133334679999999998888777665   5666666676665553

>PLN00106 malate dehydrogenase

Probab=98.68  E-value=2e-07  Score=82.19  Aligned_cols=169  Identities=10%  Similarity=-0.031  Sum_probs=111.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-CCCeeEEe-cccC--CcccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-HPRFELIR-HDVT--EPLLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~d~~--~~~~~~~d~vi~~a~  106 (346)
                      ..||+|+|++|.||..++..|..++. .+++++++..  .......+.. ........ .+.+  -..+.++|+|||+||
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG   95 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAG   95 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence            46999999999999999999997774 5899998855  1111111111 11112211 1111  124568999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCC--CCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD--PLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~--~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ...  ....+....+..|...+.++++.+++.+. .+|+++|--+=+.  -........     ....|...||.++...
T Consensus        96 ~~~--~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~-----s~~p~~~viG~~~LDs  168 (323)
T PLN00106         96 VPR--KPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKA-----GVYDPKKLFGVTTLDV  168 (323)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc-----CCCCcceEEEEecchH
Confidence            643  23456788899999999999999999987 6777776433100  000000011     3456667899999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      +++-..+++..+++..-+. +.|+|.+
T Consensus       169 ~Rl~~~lA~~lgv~~~~V~-~~ViGeH  194 (323)
T PLN00106        169 VRANTFVAEKKGLDPADVD-VPVVGGH  194 (323)
T ss_pred             HHHHHHHHHHhCCChhheE-EEEEEeC
Confidence            9998888998888877774 4555543

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.58  E-value=2.4e-07  Score=82.76  Aligned_cols=92  Identities=26%  Similarity=0.335  Sum_probs=71.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----CCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----EVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----~~d~vi~~  104 (346)
                      +|+|||+|+ |+||+.++..|.+++..+|++.+|+..+    ..+...  .++++..+.|..+....     +.|+||++
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~----~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~   75 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEK----CARIAELIGGKVEALQVDAADVDALVALIKDFDLVINA   75 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHH----HHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEe
Confidence            479999998 9999999999999998899999996422    222211  23789999999987433     68999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~S  146 (346)
                      +.++.                  ..+++++|.+.|++++=+|
T Consensus        76 ~p~~~------------------~~~i~ka~i~~gv~yvDts   99 (389)
T COG1748          76 APPFV------------------DLTILKACIKTGVDYVDTS   99 (389)
T ss_pred             CCchh------------------hHHHHHHHHHhCCCEEEcc
Confidence            85432                  3478999999998887555

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.51  E-value=1.7e-07  Score=72.44  Aligned_cols=207  Identities=17%  Similarity=0.191  Sum_probs=132.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      +-..|||||...+|+..++.|.+.| ..|.+++-..++..+..+++.  .++.|...|+++...+            +.|
T Consensus         9 glvalvtggasglg~ataerlakqg-asv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgrld   85 (260)
T KOG1199|consen    9 GLVALVTGGASGLGKATAERLAKQG-ASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGRLD   85 (260)
T ss_pred             CeeEEeecCcccccHHHHHHHHhcC-ceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence            4568899999999999999999999 999999986655554444432  3678889999886433            599


Q ss_pred             EEEEcccCCCcc----------ccccChHHHHHHHHHHHHHHHHHHHH---------cCCe--EEEEecccccCCCCCCC
Q 019060          100 QIYHLACPASPI----------FYKYNPVKTIKTNVIGTLNMLGLAKR---------VGAR--ILLTSTSEVYGDPLVHP  158 (346)
Q Consensus       100 ~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~r--~i~~SS~~v~~~~~~~~  158 (346)
                      ..++|||...-.          ...++....+++|+.++.++++....         .|-|  +|.+.|.+.|..     
T Consensus        86 ~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg-----  160 (260)
T KOG1199|consen   86 ALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG-----  160 (260)
T ss_pred             eeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC-----
Confidence            999999964311          12345677889999999999875321         1224  666667777743     


Q ss_pred             CCCCCcCCCCCCCCCCchHHhHHHHHH----HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEE
Q 019060          159 QDESYWGNVNPIGVRSCYDEGKRVAET----LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (346)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~E~----~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
                                 ......|+.||...--    +.++++.. ++++..+-||..--|-.     ..++.-++.++... +++
T Consensus       161 -----------q~gqaaysaskgaivgmtlpiardla~~-gir~~tiapglf~tpll-----sslpekv~~fla~~-ipf  222 (260)
T KOG1199|consen  161 -----------QTGQAAYSASKGAIVGMTLPIARDLAGD-GIRFNTIAPGLFDTPLL-----SSLPEKVKSFLAQL-IPF  222 (260)
T ss_pred             -----------ccchhhhhcccCceEeeechhhhhcccC-ceEEEeecccccCChhh-----hhhhHHHHHHHHHh-CCC
Confidence                       2233568888876543    34444433 78888888876554431     12233333333222 222


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC--CCcEEecC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGN  270 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~  270 (346)
                      +.      .+-|..+-+..+-.+++++-  ++++-+.+
T Consensus       223 ps------rlg~p~eyahlvqaiienp~lngevir~dg  254 (260)
T KOG1199|consen  223 PS------RLGHPHEYAHLVQAIIENPYLNGEVIRFDG  254 (260)
T ss_pred             ch------hcCChHHHHHHHHHHHhCcccCCeEEEecc
Confidence            11      23456677777777788776  33444443

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=98.51  E-value=4.4e-07  Score=74.63  Aligned_cols=155  Identities=14%  Similarity=0.151  Sum_probs=102.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC----eEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccC-----
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN----EVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~----~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~-----   96 (346)
                      |.|.+||||+++.+|-.|+.+|++..+.    .+++.+|+-++.++...++.+     .-+++++..|+++..++     
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            4677899999999999999999998742    355667876555544443322     12578899999986443     


Q ss_pred             -------CCCEEEEcccCCCccc-------------------------------cccChHHHHHHHHHHHHHHHHHHHHc
Q 019060           97 -------EVDQIYHLACPASPIF-------------------------------YKYNPVKTIKTNVIGTLNMLGLAKRV  138 (346)
Q Consensus        97 -------~~d~vi~~a~~~~~~~-------------------------------~~~~~~~~~~~n~~~~~~l~~~~~~~  138 (346)
                             +.|.|+.+||......                               +.++-...++.|+-|...++......
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence                   5999999999643211                               22344678899999988887755432


Q ss_pred             ----C-CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHH
Q 019060          139 ----G-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR  192 (346)
Q Consensus       139 ----~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  192 (346)
                          . .++|++||...-.    ..++=+++   .......+|..||+...-+-....+
T Consensus       162 l~~~~~~~lvwtSS~~a~k----k~lsleD~---q~~kg~~pY~sSKrl~DlLh~A~~~  213 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARK----KNLSLEDF---QHSKGKEPYSSSKRLTDLLHVALNR  213 (341)
T ss_pred             hhcCCCCeEEEEeeccccc----ccCCHHHH---hhhcCCCCcchhHHHHHHHHHHHhc
Confidence                2 2799999986522    11221111   2233445699999999876544433

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.43  E-value=1.4e-06  Score=77.12  Aligned_cols=163  Identities=12%  Similarity=0.070  Sum_probs=112.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-C-----eEEEEeCCCCC--CcchhhhhcCC-----CCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d   99 (346)
                      +||.|+|++|.||..++-.|+..+. .     ++.+++.....  .......+...     .++.....|  ..+..+.|
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daD   80 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDP--NVAFKDAD   80 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCc--HHHhCCCC
Confidence            5899999999999999999998774 2     68888874322  11111111110     122222222  23455799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEeccc---ccCCCCCCCCCCCCcCCCCC-CCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSE---VYGDPLVHPQDESYWGNVNP-IGV  172 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS~~---v~~~~~~~~~~e~~~~~~~~-~~~  172 (346)
                      +||.+||...  ....+....+..|..-...+.....+.+ .  .+|.+|-..   +|--     ...      .+ ..+
T Consensus        81 ivvitaG~~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-----~k~------sg~~p~  147 (322)
T cd01338          81 WALLVGAKPR--GPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA-----MKN------APDIPP  147 (322)
T ss_pred             EEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH-----HHH------cCCCCh
Confidence            9999998643  2345677889999999999999998876 2  577776432   1100     000      11 344


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ...||.++...+++...+++..+++...+|...|||++
T Consensus       148 ~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         148 DNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence            56799999999999999999999999999999999987

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.42  E-value=3.2e-06  Score=75.06  Aligned_cols=111  Identities=16%  Similarity=0.114  Sum_probs=72.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC------CeEEEEeCCCCC--CcchhhhhcC-----CCCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTG--SKDNLRKWIG-----HPRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~------~~V~~~~r~~~~--~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d   99 (346)
                      .||+||||+|+||++++..|+..+.      .++++++++...  .......+..     ..++. +..| ....+.++|
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~-~~~~-~~~~l~~aD   80 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVV-ATTD-PEEAFKDVD   80 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCce-ecCC-HHHHhCCCC
Confidence            3799999999999999999998552      489999985421  1110001110     00110 0111 112345799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEec
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST  147 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS  147 (346)
                      +|||+||...  ....+....++.|+.-...+.....+.. .  .+|.+|.
T Consensus        81 iVI~tAG~~~--~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          81 VAILVGAMPR--KEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEEeCCcCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecC
Confidence            9999998753  2345668889999999999988888773 2  5777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.33  E-value=1.8e-05  Score=70.72  Aligned_cols=76  Identities=14%  Similarity=0.121  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCchhHHHH--HHHHHHhcCCCeEEEEeCCCCCCc-----------chhhhhcCC--CCeeEEecccCCccc
Q 019060           31 SNMRILVTGGAGFIGSH--LVDKLMENEKNEVIVVDNYFTGSK-----------DNLRKWIGH--PRFELIRHDVTEPLL   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~~-----------~~~~~~~~~--~~~~~~~~d~~~~~~   95 (346)
                      .+|++||||+++.+|.+  +++.| +.| ..|+++++......           +...+....  ..+..+.+|+++.+.
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~G-A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAG-ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcC-CeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            35899999999999999  89999 999 88888875321111           112222222  235678999998643


Q ss_pred             C------------CCCEEEEcccCC
Q 019060           96 I------------EVDQIYHLACPA  108 (346)
Q Consensus        96 ~------------~~d~vi~~a~~~  108 (346)
                      .            ++|++||++|..
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            2            599999999965

>PRK09620 hypothetical protein; Provisional

Probab=98.31  E-value=1.3e-06  Score=73.27  Aligned_cols=76  Identities=20%  Similarity=0.426  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCc----------------hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEec--ccCC
Q 019060           31 SNMRILVTGGA----------------GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH--DVTE   92 (346)
Q Consensus        31 ~~~~ilItG~t----------------G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--d~~~   92 (346)
                      .+|+||||+|.                ||+|++|+++|+++| ++|+++++..........   ....+..+.+  |+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-a~V~li~g~~~~~~~~~~---~~~~~~~V~s~~d~~~   77 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-AHVIYLHGYFAEKPNDIN---NQLELHPFEGIIDLQD   77 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-CeEEEEeCCCcCCCcccC---CceeEEEEecHHHHHH
Confidence            37899999886                999999999999999 999998864321111110   0112333444  4332


Q ss_pred             c---cc--CCCCEEEEcccCCCc
Q 019060           93 P---LL--IEVDQIYHLACPASP  110 (346)
Q Consensus        93 ~---~~--~~~d~vi~~a~~~~~  110 (346)
                      .   ..  .++|+|||+|+..+.
T Consensus        78 ~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         78 KMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHHHhcccCCCEEEECccccce
Confidence            1   11  368999999997654

>PRK05086 malate dehydrogenase; Provisional

Probab=98.29  E-value=1.4e-05  Score=70.61  Aligned_cols=112  Identities=19%  Similarity=0.077  Sum_probs=74.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHh-cCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEec-ccCC--cccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLME-NEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTE--PLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~-~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-d~~~--~~~~~~d~vi~~a~~  107 (346)
                      |||+|+||+|.+|++++..|.. .+. +++++++|+.. .......+...+....+.+ +-.+  ....++|+||.++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence            7999999999999999998855 232 68888887632 2111111111111112222 1122  344579999999986


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS  147 (346)
                      ..  ....+....+..|.....++++++++.+. ++|.+.|
T Consensus        80 ~~--~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         80 AR--KPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            43  23346778889999999999999999886 5666665

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.23  E-value=1.9e-05  Score=61.19  Aligned_cols=111  Identities=14%  Similarity=0.146  Sum_probs=76.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc-----CCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |||.|+|++|.+|++++-.|...+. .++++++++..........+.     ..........+  ..+..+.|+||.+||
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~~aDivvitag   78 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD--YEALKDADIVVITAG   78 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS--GGGGTTESEEEETTS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc--ccccccccEEEEecc
Confidence            7999999999999999999999985 579999986332222211111     11122333322  233457999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ....+....++.|......+.+...+.+.  .++.+|.
T Consensus        79 ~~~--~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   79 VPR--KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TSS--STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccc--cccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCC
Confidence            642  33456778889999999999999988874  5665553

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.20  E-value=6e-06  Score=70.43  Aligned_cols=89  Identities=17%  Similarity=0.200  Sum_probs=60.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a  105 (346)
                      |+|||+||||. |+.|++.|.+.| ++|++..+...... .+.    ..+...+..+..+...       .++|+||+.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g-~~v~~s~~t~~~~~-~~~----~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAt   73 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQG-IEILVTVTTSEGKH-LYP----IHQALTVHTGALDPQELREFLKRHSIDILVDAT   73 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCC-CeEEEEEccCCccc-ccc----ccCCceEEECCCCHHHHHHHHHhcCCCEEEEcC
Confidence            78999999999 999999999999 99999888653221 111    1112223333333322       2699999987


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                      -++               ......++.++|++.++.++
T Consensus        74 HPf---------------A~~is~~a~~a~~~~~ipyl   96 (256)
T TIGR00715        74 HPF---------------AAQITTNATAVCKELGIPYV   96 (256)
T ss_pred             CHH---------------HHHHHHHHHHHHHHhCCcEE
Confidence            332               23457788999999998555

This enzyme was found to be a monomer by gel filtration.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.18  E-value=1.3e-05  Score=60.59  Aligned_cols=96  Identities=15%  Similarity=0.210  Sum_probs=57.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      ||.|+||||++|+.|++.|.++...++..+..+..+....+.....    ...+.+..  .......++|+||.+..   
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~---   75 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALP---   75 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SC---
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCc---
Confidence            6999999999999999999997755655544333222222222211    11222222  22233457999999862   


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                     ......+...+.+.|+++|=.|+..
T Consensus        76 ---------------~~~~~~~~~~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   76 ---------------HGASKELAPKLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             ---------------HHHHHHHHHHHHHTTSEEEESSSTT
T ss_pred             ---------------hhHHHHHHHHHhhCCcEEEeCCHHH
Confidence                           1134556667777788777666654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.18  E-value=1.9e-05  Score=71.52  Aligned_cols=102  Identities=17%  Similarity=0.220  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCCCCe-eEEecccCCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPRF-ELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~-~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+.|+|.|.||||++|+.|++.|.++...+++.+.+.... ...+..   ++....+ ++.  ++......++|+||.+.
T Consensus        36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~~~~~l~~~~~~~~~--~~~~~~~~~~DvVf~Al  112 (381)
T PLN02968         36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGSVFPHLITQDLPNLV--AVKDADFSDVDAVFCCL  112 (381)
T ss_pred             ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchhhCccccCcccccee--cCCHHHhcCCCEEEEcC
Confidence            3567999999999999999999999954789888764321 111111   0110011 111  11111234699999866


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~  153 (346)
                      +.                  ....+++..+ +.++++|-.|+.+-+.+
T Consensus       113 p~------------------~~s~~i~~~~-~~g~~VIDlSs~fRl~~  141 (381)
T PLN02968        113 PH------------------GTTQEIIKAL-PKDLKIVDLSADFRLRD  141 (381)
T ss_pred             CH------------------HHHHHHHHHH-hCCCEEEEcCchhccCC
Confidence            21                  1345566665 35679999999886654

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.17  E-value=5.9e-06  Score=69.64  Aligned_cols=64  Identities=17%  Similarity=0.307  Sum_probs=43.6

Q ss_pred             cCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-------ccCCCCEEEEcccCCC
Q 019060           39 GGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-------LLIEVDQIYHLACPAS  109 (346)
Q Consensus        39 G~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------~~~~~d~vi~~a~~~~  109 (346)
                      .+|||+|++|+++|+++| ++|+++.|......      ....++.++..+..+.       ...++|+|||+||...
T Consensus        23 ~SSG~iG~aLA~~L~~~G-~~V~li~r~~~~~~------~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         23 HSTGQLGKIIAETFLAAG-HEVTLVTTKTAVKP------EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             ccchHHHHHHHHHHHhCC-CEEEEEECcccccC------CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            569999999999999999 99999987532111      0113455555443321       1236899999999765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.16  E-value=7e-06  Score=75.31  Aligned_cols=90  Identities=24%  Similarity=0.236  Sum_probs=61.9

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcccCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLACPA  108 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~~~  108 (346)
                      |+|+|| |++|+.+++.|.+++.+ +|++.+|+..... .+.......++..++.|..+...     .+.|+|||++++.
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAE-RLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHH-HHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHH-HHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence            789999 99999999999999855 8999998542211 12211144689999999998754     3799999999754


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~  144 (346)
                                        ....++++|.+.|+++|=
T Consensus        79 ------------------~~~~v~~~~i~~g~~yvD   96 (386)
T PF03435_consen   79 ------------------FGEPVARACIEAGVHYVD   96 (386)
T ss_dssp             ------------------GHHHHHHHHHHHT-EEEE
T ss_pred             ------------------hhHHHHHHHHHhCCCeec
Confidence                              134688888888888775

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=98.00  E-value=0.00067  Score=55.59  Aligned_cols=212  Identities=16%  Similarity=0.098  Sum_probs=123.9

Q ss_pred             CCCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCC-eeEEecccCCcccC----------
Q 019060           30 QSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR-FELIRHDVTEPLLI----------   96 (346)
Q Consensus        30 ~~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~----------   96 (346)
                      ..+|++||+|-.  .-|+..+++.|.++| .++..+.... ......+++.+.-+ .-++.||+.+.+..          
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~G-AeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQG-AELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcC-CEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            357999999854  579999999999999 8877665432 22233333332222 34689999986543          


Q ss_pred             --CCCEEEEcccCCCcccc--------ccChHHHHHHHHHHHHHHHHHHHHc---CCeEE---EEecccccCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIFY--------KYNPVKTIKTNVIGTLNMLGLAKRV---GARIL---LTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i---~~SS~~v~~~~~~~~~~  160 (346)
                        ++|.++|+.+.......        .+......++.......+.++++..   |.-+|   |..|..+.         
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~v---------  152 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVV---------  152 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeec---------
Confidence              59999999987652221        1223334445555556666666542   22333   33343321         


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEecccc-CCCCCCCC--ccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY-GPRMNIDD--GRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~-G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                                .-.+..|.+|...|.-++.++...+.+  -+|...|- ||-.....  -..+..++......-++     
T Consensus       153 ----------PnYNvMGvAKAaLEasvRyLA~dlG~~--gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl-----  215 (259)
T COG0623         153 ----------PNYNVMGVAKAALEASVRYLAADLGKE--GIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL-----  215 (259)
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHhCcc--CeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc-----
Confidence                      112578999999999999998876533  34444432 44211000  01133344333333333     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                          ..-+..+||++..+.++..-.    +++.++.+|-.
T Consensus       216 ----~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~  251 (259)
T COG0623         216 ----RRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             ----cCCCCHHHhhhhHHHHhcchhcccccceEEEcCCce
Confidence                234568899998888776533    45677766543

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.97  E-value=4.3e-05  Score=68.40  Aligned_cols=96  Identities=19%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +|+|+|+||||++|+.|++.|.+++ |   ++..+.+..... ..+ .+   .+.+....|+.+....++|+||.+++..
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~-hp~~~l~~l~s~~~~g-~~l-~~---~g~~i~v~d~~~~~~~~vDvVf~A~g~g   74 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERN-FPVDKLRLLASARSAG-KEL-SF---KGKELKVEDLTTFDFSGVDIALFSAGGS   74 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CCcceEEEEEccccCC-Cee-ee---CCceeEEeeCCHHHHcCCCEEEECCChH
Confidence            4799999999999999999999977 5   456776543211 111 11   1233444455544445799999877421


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                                        .+..++..+.+.|+++|=.|+..-+
T Consensus        75 ------------------~s~~~~~~~~~~G~~VIDlS~~~R~   99 (334)
T PRK14874         75 ------------------VSKKYAPKAAAAGAVVIDNSSAFRM   99 (334)
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCchhhc
Confidence                              2334555555667777767776543

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.97  E-value=7.3e-05  Score=67.36  Aligned_cols=99  Identities=12%  Similarity=0.206  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC----------CCeeEEecccCCcccCCCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~d~  100 (346)
                      |+++|+|+||||++|+.|++.|+++...+++.+.++..............          ..+.+...|..  ...++|+
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~Dv   79 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPE--AVDDVDI   79 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHH--HhcCCCE
Confidence            45899999999999999999999887458887744432222222111000          11222222211  1236899


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      |+.+...                +  ....+++.+.+.|+++|-.|+..
T Consensus        80 Vf~a~p~----------------~--~s~~~~~~~~~~G~~vIDls~~f  110 (349)
T PRK08664         80 VFSALPS----------------D--VAGEVEEEFAKAGKPVFSNASAH  110 (349)
T ss_pred             EEEeCCh----------------h--HHHHHHHHHHHCCCEEEECCchh
Confidence            9876421                1  12345567777788887777765

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.97  E-value=0.00016  Score=63.96  Aligned_cols=112  Identities=14%  Similarity=0.086  Sum_probs=74.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC--CCCcchhhhhcC----C-CCeeEEe-cccCCcccCCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF--TGSKDNLRKWIG----H-PRFELIR-HDVTEPLLIEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~--~~~~~~~~~~~~----~-~~~~~~~-~d~~~~~~~~~d~vi~  103 (346)
                      |||.|+|++|++|..++..|+..|. .+|++++|..  .........+..    . ...++.. .|.  ....+.|+||.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~--~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL--SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH--HHhCCCCEEEE
Confidence            7999999999999999999999983 3599999843  111111111110    1 1122221 232  23668999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      ++|...  ....+....+..|......+++.+.+...  .+|.+++.
T Consensus        79 tag~p~--~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          79 TAGVPR--KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             ecCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            997532  22334567788999999999998877753  67777764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00704 MDH Malate dehydrogenase

Probab=97.91  E-value=0.00011  Score=65.12  Aligned_cols=110  Identities=16%  Similarity=0.132  Sum_probs=72.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC------CeEEEEeCCC--CCCcchhhhhcCC-----CCeeEEecccCCcccCCCCE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYF--TGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~------~~V~~~~r~~--~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d~  100 (346)
                      ||.|+||+|.||+.++..|...+.      +++++++++.  +........+...     .... +..+ ......++|+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~-i~~~-~~~~~~~aDi   79 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVV-ITTD-PEEAFKDVDV   79 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcE-EecC-hHHHhCCCCE
Confidence            799999999999999999987663      2488888754  1111111111000     0111 1111 1233457999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEec
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTST  147 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS  147 (346)
                      |||+||...  ....+....+..|....+.+...+.+.. .  .+|.+|-
T Consensus        80 VVitAG~~~--~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          80 AILVGAFPR--KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             EEEeCCCCC--CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            999998643  3445778889999999999999998884 4  5666664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.89  E-value=8.3e-05  Score=66.78  Aligned_cols=101  Identities=14%  Similarity=0.188  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CC---CeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |+|+|+|+||||++|+.+++.|.++...+++.+.+.. .....+..... ..   ...+...|  +....++|+||.+..
T Consensus         1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~-~~g~~l~~~~~~~~~~~~~~~~~~~--~~~~~~vD~Vf~alP   77 (343)
T PRK00436          1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS-SAGKPLSDVHPHLRGLVDLVLEPLD--PEILAGADVVFLALP   77 (343)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc-ccCcchHHhCcccccccCceeecCC--HHHhcCCCEEEECCC
Confidence            3589999999999999999999987547777665522 12112211111 01   11122222  112346999998652


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .                  .....++..+.+.|+++|=.|+.+-+.
T Consensus        78 ~------------------~~~~~~v~~a~~aG~~VID~S~~fR~~  105 (343)
T PRK00436         78 H------------------GVSMDLAPQLLEAGVKVIDLSADFRLK  105 (343)
T ss_pred             c------------------HHHHHHHHHHHhCCCEEEECCcccCCC
Confidence            1                  123455566666788899888876553

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.86  E-value=9.4e-05  Score=65.87  Aligned_cols=96  Identities=17%  Similarity=0.215  Sum_probs=58.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +++|+|+||||++|+.|++.|.+++ |   ++..+... .+....+. +.. ..+++...+..  +..++|+||.+... 
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~-hP~~~l~~v~s~-~~aG~~l~-~~~-~~l~~~~~~~~--~~~~vD~vFla~p~-   76 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERD-FPVGTLHLLASS-ESAGHSVP-FAG-KNLRVREVDSF--DFSQVQLAFFAAGA-   76 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCC-CCceEEEEEECc-ccCCCeec-cCC-cceEEeeCChH--HhcCCCEEEEcCCH-
Confidence            3799999999999999999999766 4   33344322 11111111 111 22333333322  23479999987621 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                                       .....++..+.+.|+++|=.|+.+-+
T Consensus        77 -----------------~~s~~~v~~~~~~G~~VIDlS~~fR~  102 (336)
T PRK05671         77 -----------------AVSRSFAEKARAAGCSVIDLSGALPS  102 (336)
T ss_pred             -----------------HHHHHHHHHHHHCCCeEEECchhhcC
Confidence                             01234777777788888888887754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.79  E-value=9.5e-05  Score=69.34  Aligned_cols=75  Identities=21%  Similarity=0.203  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+++|+|+|+++ +|..+++.|++.| ++|++.++.....-......+...+++++.+|..+....++|+||+++|.
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G-~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~   78 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLG-AKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGV   78 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCC
Confidence            468999999888 9999999999999 99999988532211111122223367788888877555579999998875

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.79  E-value=3.8e-05  Score=63.25  Aligned_cols=74  Identities=12%  Similarity=0.174  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCc-----ccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEP-----LLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-----~~~~~d~vi~~  104 (346)
                      .+++++|+||+|.+|+.+++.|.+.| ++|+++.|+.... +.+...+. ..+......|..+.     ...++|+||++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g-~~V~l~~R~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a  104 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREG-ARVVLVGRDLERA-QKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA  104 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHH-HHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence            46899999999999999999999999 8999999864221 12211111 12334445555443     23369999986


Q ss_pred             cc
Q 019060          105 AC  106 (346)
Q Consensus       105 a~  106 (346)
                      ..
T Consensus       105 t~  106 (194)
T cd01078         105 GA  106 (194)
T ss_pred             CC
Confidence            63

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.76  E-value=0.00014  Score=54.99  Aligned_cols=97  Identities=22%  Similarity=0.376  Sum_probs=55.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEE-EEeCCCC-CCcchhhhhcCCCCeeE-EecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFT-GSKDNLRKWIGHPRFEL-IRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~-~~~r~~~-~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      |||+|.|++|.+|+.+++.+.+...+++. +++|..+ ......-.......... +..|+.+ ....+|++|.+.    
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~-~~~~~DVvIDfT----   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEE-LLEEADVVIDFT----   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHH-HTTH-SEEEEES----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHH-hcccCCEEEEcC----
Confidence            68999999999999999999995437755 5555431 11111111111111111 1222222 222499999876    


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                    +-..+...++.|.+.++.+|.-+|.
T Consensus        76 --------------~p~~~~~~~~~~~~~g~~~ViGTTG  100 (124)
T PF01113_consen   76 --------------NPDAVYDNLEYALKHGVPLVIGTTG  100 (124)
T ss_dssp             ---------------HHHHHHHHHHHHHHT-EEEEE-SS
T ss_pred             --------------ChHHhHHHHHHHHhCCCCEEEECCC
Confidence                          2234667788888888888755554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=97.75  E-value=0.00064  Score=59.83  Aligned_cols=162  Identities=12%  Similarity=-0.016  Sum_probs=98.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC-CCeeEEe--ccc-CCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIR--HDV-TEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~d~-~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+|++|.+|++++-.|...+. .++.+++.+  ........+... ....+..  .|- .-.+..+.|+||-+||.
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~   78 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV   78 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence            6999999999999999999988874 478888876  222222222111 1122222  210 01345679999999986


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEeccc-------ccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSE-------VYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~-------v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      ..  ....+....+..|..-...+++...+.+.  .+|.+|-..       .|--.     ..      ....+....|.
T Consensus        79 ~~--k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~-----~~------s~~p~~rviG~  145 (310)
T cd01337          79 PR--KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLK-----KA------GVYDPKRLFGV  145 (310)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHH-----Hh------cCCCHHHEEee
Confidence            42  33456788889999999999999988764  677777543       21100     00      11111122333


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      .-...-++....++..+++..-++ +.++|.+
T Consensus       146 ~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         146 TTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             echHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            323334444455566677666666 7788865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.73  E-value=0.00052  Score=60.98  Aligned_cols=163  Identities=12%  Similarity=0.087  Sum_probs=92.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCC------eEEEEeCCCCC--CcchhhhhcCCC--Ce-eEEecccCCcccCCCCEEE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKN------EVIVVDNYFTG--SKDNLRKWIGHP--RF-ELIRHDVTEPLLIEVDQIY  102 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~------~V~~~~r~~~~--~~~~~~~~~~~~--~~-~~~~~d~~~~~~~~~d~vi  102 (346)
                      +|+|+|++|.||..++..|...+..      +++++++....  .......+....  .. ..+..+-...+..++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            5899999999999999999875532      58888875322  111111111100  00 0111111123445799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEeccc-----ccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSE-----VYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS~~-----v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      ++||...  ....+..+.+..|+.-.+.+.....+.. .  .+|.+|-..     +.-...+.          .+..  .
T Consensus        81 itAG~~~--~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg~----------~~~~--v  146 (324)
T TIGR01758        81 LVGAFPR--KEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAPS----------IPPK--N  146 (324)
T ss_pred             EcCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcCC----------CCcc--e
Confidence            9998643  2234578889999999999999998874 3  676666432     11000000          0111  1


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      .=+.+....-++-...++..+++..-+.-..|+|.+
T Consensus       147 ig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeH  182 (324)
T TIGR01758       147 FSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNH  182 (324)
T ss_pred             EEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECC
Confidence            111223333444444555667777777666777864

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.71  E-value=0.00073  Score=59.88  Aligned_cols=112  Identities=13%  Similarity=0.154  Sum_probs=78.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ..+||.|+|+ |.+|..++-.|...+. .++.+++++..........+...    ..+.....|.  .++.+.|+||.+|
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~--~~~~~adivIita   81 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDY--SDCKDADLVVITA   81 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCH--HHhCCCCEEEEec
Confidence            3579999997 9999999999999884 37999998654333332222211    2334443333  2456899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      |...  ....+....+..|..-...+++.+.+.+.  .+|.+|-
T Consensus        82 g~~~--k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         82 GAPQ--KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence            8642  23456678889999999999999888764  6776664

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.71  E-value=0.00021  Score=64.24  Aligned_cols=100  Identities=12%  Similarity=0.161  Sum_probs=59.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC---C-CCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG---H-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~---~-~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |+|.|+||||++|+.+++.|.++...++..+ .+.. .....+.....   . ....+...|..+.. .++|+||.+...
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~-sagk~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~DvVf~alP~   78 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE-SAGKPVSEVHPHLRGLVDLNLEPIDEEEIA-EDADVVFLALPH   78 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch-hcCCChHHhCccccccCCceeecCCHHHhh-cCCCEEEECCCc
Confidence            6899999999999999999998754677744 4322 11111211111   0 01122222222211 269999987621


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .                  ....++..+.+.|+++|=.|+.+=+.
T Consensus        79 ~------------------~s~~~~~~~~~~G~~VIDlS~~fR~~  105 (346)
T TIGR01850        79 G------------------VSAELAPELLAAGVKVIDLSADFRLK  105 (346)
T ss_pred             h------------------HHHHHHHHHHhCCCEEEeCChhhhcC
Confidence            1                  34556666667788999999876543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.67  E-value=5.3e-05  Score=67.08  Aligned_cols=71  Identities=23%  Similarity=0.255  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC--cccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE--PLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~d~vi~~a~~  107 (346)
                      .+++|+||||+|+||+.++++|.++ |...++++.|+... ...+...+.       .+++.+  ....++|+|||+++.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~r-l~~La~el~-------~~~i~~l~~~l~~aDiVv~~ts~  225 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQER-LQELQAELG-------GGKILSLEEALPEADIVVWVASM  225 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHH-HHHHHHHhc-------cccHHhHHHHHccCCEEEECCcC
Confidence            4689999999999999999999865 54688888885321 111111111       122221  233469999999975


Q ss_pred             CC
Q 019060          108 AS  109 (346)
Q Consensus       108 ~~  109 (346)
                      ..
T Consensus       226 ~~  227 (340)
T PRK14982        226 PK  227 (340)
T ss_pred             Cc
Confidence            43

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.67  E-value=0.00037  Score=62.61  Aligned_cols=102  Identities=15%  Similarity=0.175  Sum_probs=57.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC------CCC-e-eEEecccCCcccCCCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------HPR-F-ELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~------~~~-~-~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      |+|+|+|+||++|++|++.|..++..++..+.++.............      ... + .+...++......++|+|+.+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a   80 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSA   80 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEe
Confidence            58999999999999999999887745777664332211111111110      000 1 111111111123468999887


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ...                +  ....+...+.+.|+++|-.|+.+-+.
T Consensus        81 ~p~----------------~--~s~~~~~~~~~~G~~VIDlsg~fR~~  110 (341)
T TIGR00978        81 LPS----------------E--VAEEVEPKLAEAGKPVFSNASNHRMD  110 (341)
T ss_pred             CCH----------------H--HHHHHHHHHHHCCCEEEECChhhccC
Confidence            621                1  12234456666788888888876543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.61  E-value=0.00014  Score=66.26  Aligned_cols=69  Identities=23%  Similarity=0.241  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc
Q 019060           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL   94 (346)
Q Consensus        31 ~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   94 (346)
                      .+++||||||                ||.+|.+++++|.++| ++|++++++... .  .     ..++  ...|+.+..
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-a~V~~v~~~~~~-~--~-----~~~~--~~~dv~~~~  255 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-ADVTLVSGPVNL-P--T-----PAGV--KRIDVESAQ  255 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-CEEEEeCCCccc-c--C-----CCCc--EEEccCCHH
Confidence            5789999999                9999999999999999 999999875411 0  0     0122  234555421


Q ss_pred             ---------cCCCCEEEEcccCCCc
Q 019060           95 ---------LIEVDQIYHLACPASP  110 (346)
Q Consensus        95 ---------~~~~d~vi~~a~~~~~  110 (346)
                               ..++|++||+||....
T Consensus       256 ~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        256 EMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHHHHHHhcCCCCEEEEccccccc
Confidence                     2359999999997653

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.54  E-value=8.1e-05  Score=64.64  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=55.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHh----cCCCeEEEEeCCCCCCcchhhhhcCC-----CCeeEEecccCCcccC-----CCC
Q 019060           34 RILVTGGAGFIGSHLVDKLME----NEKNEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLI-----EVD   99 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~----~g~~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~-----~~d   99 (346)
                      -++|.|||||.|.+++++++.    .+ ...-+..|+..+..+.+......     +...++.+|..|++++     ++-
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~-~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~   85 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEG-LSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQAR   85 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccC-ceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhE
Confidence            588999999999999999999    55 67777788765544444333221     1223788999888765     599


Q ss_pred             EEEEcccCC
Q 019060          100 QIYHLACPA  108 (346)
Q Consensus       100 ~vi~~a~~~  108 (346)
                      +|+||+|+.
T Consensus        86 vivN~vGPy   94 (423)
T KOG2733|consen   86 VIVNCVGPY   94 (423)
T ss_pred             EEEeccccc
Confidence            999999875

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.54  E-value=0.00043  Score=61.97  Aligned_cols=99  Identities=13%  Similarity=0.149  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ..++|+|.||||++|+.|++.|.+++ |   ++..+..... ..... ..   .+.++...++......++|+||.+++.
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~-hP~~~l~~las~rs-aGk~~-~~---~~~~~~v~~~~~~~~~~~D~vf~a~p~   79 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRD-FPYSSLKMLASARS-AGKKV-TF---EGRDYTVEELTEDSFDGVDIALFSAGG   79 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCC-CCcceEEEEEccCC-CCCee-ee---cCceeEEEeCCHHHHcCCCEEEECCCc
Confidence            35799999999999999999999876 5   3443432211 11111 11   112233333333334579999987732


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~  153 (346)
                      .                  ....++..+.+.|+++|=.|+.+-+.+
T Consensus        80 ~------------------~s~~~~~~~~~~g~~VIDlS~~fR~~~  107 (344)
T PLN02383         80 S------------------ISKKFGPIAVDKGAVVVDNSSAFRMEE  107 (344)
T ss_pred             H------------------HHHHHHHHHHhCCCEEEECCchhhcCC
Confidence            1                  233455555566888888888775543

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.52  E-value=0.00055  Score=60.88  Aligned_cols=100  Identities=16%  Similarity=0.194  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ..++|.|.||||++|+.|++.|.++.  ..++..+.... +....+ . +....+.+.  ++......++|++|.+++. 
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~-saG~~~-~-~~~~~~~v~--~~~~~~~~~~Dvvf~a~p~-   76 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEE-SAGETL-R-FGGKSVTVQ--DAAEFDWSQAQLAFFVAGR-   76 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccC-cCCceE-E-ECCcceEEE--eCchhhccCCCEEEECCCH-
Confidence            46899999999999999999999853  24566554321 111111 1 111123333  4433333578999987621 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~  153 (346)
                                       .....++..+.+.|+++|=.|+.+-+.+
T Consensus        77 -----------------~~s~~~~~~~~~~g~~VIDlS~~fRl~~  104 (336)
T PRK08040         77 -----------------EASAAYAEEATNAGCLVIDSSGLFALEP  104 (336)
T ss_pred             -----------------HHHHHHHHHHHHCCCEEEECChHhcCCC
Confidence                             1244566666667888888888775543

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.51  E-value=0.0018  Score=57.35  Aligned_cols=112  Identities=13%  Similarity=0.083  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC----CCeeEEe-cccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      +.+||.|+|+ |.||..++-.|+..+. .++.+++.+..........+...    ....... .|+.  +..++|+||.+
T Consensus         2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~--~~~~adivvit   78 (312)
T cd05293           2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS--VTANSKVVIVT   78 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH--HhCCCCEEEEC
Confidence            3579999996 9999999999988875 47888887653222222222111    1123332 4443  35679999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ||...  ....+....+..|..-.+.+.+.+++.+-  .+|.+|-
T Consensus        79 aG~~~--k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          79 AGARQ--NEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccC
Confidence            98643  23456677889999999999999988864  5777764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=97.51  E-value=0.0016  Score=56.90  Aligned_cols=111  Identities=15%  Similarity=0.098  Sum_probs=75.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCC-----CCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |||.|+|+ |+||++++-.|+..+.- ++.+++............+...     ... .+.+|-.-.++.+.|+|+-+||
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~~~y~~~~~aDiVvitAG   78 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGDGDYEDLKGADIVVITAG   78 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCce-EEecCCChhhhcCCCEEEEeCC
Confidence            68999999 99999999999888754 8999998733322222222111     122 2233211234557999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  .....+-...++.|..-...+.+...+.+.  .|+.+|-
T Consensus        79 ~p--rKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          79 VP--RKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             CC--CCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecC
Confidence            53  234457778889999999999998888774  5666654

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.50  E-value=0.0014  Score=58.06  Aligned_cols=110  Identities=14%  Similarity=0.154  Sum_probs=75.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      +||.|+|+ |.+|+.++..|+..|. +++.+++|+..........+..     .........+..  ...++|+||.++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~--~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS--DCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH--HhCCCCEEEEccC
Confidence            48999995 9999999999999885 4899999865433222222111     112233333322  3457999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ....+....+..|..-...+.+.+++.+.  .+|.+|-
T Consensus        78 ~~~--~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          78 APQ--KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence            542  23456678889999999999999988764  6777775

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.50  E-value=0.00029  Score=63.09  Aligned_cols=93  Identities=13%  Similarity=0.164  Sum_probs=56.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeE---EEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEV---IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      +|+|+||||++|+.|++.|.+++ |.+   ..+.+.... ...+ .   ..+.+....|+......++|+||.+++..  
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~-hp~~~l~~~as~~~~-g~~~-~---~~~~~~~~~~~~~~~~~~~D~v~~a~g~~--   72 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERN-FPIDKLVLLASDRSA-GRKV-T---FKGKELEVNEAKIESFEGIDIALFSAGGS--   72 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCC-CChhhEEEEeccccC-CCee-e---eCCeeEEEEeCChHHhcCCCEEEECCCHH--
Confidence            58999999999999999999987 653   334343211 1111 1   12344555555544456799999887422  


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                                      ....++..+.+.|+++|=.||..-
T Consensus        73 ----------------~s~~~a~~~~~~G~~VID~ss~~R   96 (339)
T TIGR01296        73 ----------------VSKEFAPKAAKCGAIVIDNTSAFR   96 (339)
T ss_pred             ----------------HHHHHHHHHHHCCCEEEECCHHHh
Confidence                            233445555566776665666543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.50  E-value=0.00026  Score=54.53  Aligned_cols=76  Identities=21%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++++|+|+ |..|+.++..|.+.|..+|+++.|+..+ .+.+.+.+....+..+..+-......++|+||++.+..
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~r-a~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPER-AEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHH-HHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHH-HHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCC
Confidence            4789999995 8899999999999995569999996432 23333333333455655543333345799999987543

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK04148 hypothetical protein; Provisional

Probab=97.36  E-value=0.0013  Score=49.95  Aligned_cols=87  Identities=24%  Similarity=0.270  Sum_probs=63.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC---CCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~d~vi~~a~~~  108 (346)
                      +++|+++| .| .|.++++.|.+.| ++|++++.+..    .... .....+..+..|+.++...   ++|.|+.+=-  
T Consensus        17 ~~kileIG-~G-fG~~vA~~L~~~G-~~ViaIDi~~~----aV~~-a~~~~~~~v~dDlf~p~~~~y~~a~liysirp--   86 (134)
T PRK04148         17 NKKIVELG-IG-FYFKVAKKLKESG-FDVIVIDINEK----AVEK-AKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP--   86 (134)
T ss_pred             CCEEEEEE-ec-CCHHHHHHHHHCC-CEEEEEECCHH----HHHH-HHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC--
Confidence            57899999 66 8999999999999 99999997542    2221 1223678999999998754   7888885431  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                                     -......+++.+++.++.++
T Consensus        87 ---------------p~el~~~~~~la~~~~~~~~  106 (134)
T PRK04148         87 ---------------PRDLQPFILELAKKINVPLI  106 (134)
T ss_pred             ---------------CHHHHHHHHHHHHHcCCCEE
Confidence                           12346678999999998543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.36  E-value=0.00034  Score=58.90  Aligned_cols=60  Identities=18%  Similarity=0.262  Sum_probs=39.7

Q ss_pred             EcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------------cCCCCEEEEcc
Q 019060           38 TGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------------LIEVDQIYHLA  105 (346)
Q Consensus        38 tG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------------~~~~d~vi~~a  105 (346)
                      -.+||.||++++++|++.| +.|+++++...     ....   .   ...+|+.+..            ..++|++||+|
T Consensus        21 N~SSGgIG~AIA~~la~~G-a~Vvlv~~~~~-----l~~~---~---~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        21 NHSTGHLGKIITETFLSAG-HEVTLVTTKRA-----LKPE---P---HPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             CCcccHHHHHHHHHHHHCC-CEEEEEcChhh-----cccc---c---CCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            3569999999999999999 99998875311     0000   0   1223444321            12589999999


Q ss_pred             cCCC
Q 019060          106 CPAS  109 (346)
Q Consensus       106 ~~~~  109 (346)
                      |...
T Consensus        89 gv~d   92 (227)
T TIGR02114        89 AVSD   92 (227)
T ss_pred             Eecc
Confidence            9654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=97.33  E-value=0.005  Score=54.39  Aligned_cols=111  Identities=15%  Similarity=0.015  Sum_probs=74.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC-CCeeEEe--cc-cCCcccCCCCEEEEcccCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH-PRFELIR--HD-VTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~--~d-~~~~~~~~~d~vi~~a~~~  108 (346)
                      ||.|+|++|.||.+++-.|...+. .++.+++++.  .......+... ...+...  .+ -.-.+..+.|+||.+||..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~   78 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVP   78 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCC
Confidence            689999999999999999988874 4788888754  11211121111 1122221  11 0123566899999999864


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      .  ....+....+..|..-.+.+.....+.+.  .+|.+|-.
T Consensus        79 ~--~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNP  118 (312)
T TIGR01772        79 R--KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNP  118 (312)
T ss_pred             C--CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence            2  33456778889999999999998888764  57766654

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.30  E-value=0.0018  Score=56.92  Aligned_cols=86  Identities=15%  Similarity=0.165  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      |+++|.|.||||++|..|++.|.++...++..+..+...            .+     +..+....++|+||.+...   
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~------------~~-----~~~~~~~~~~DvvFlalp~---   60 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK------------DA-----AARRELLNAADVAILCLPD---   60 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC------------cc-----cCchhhhcCCCEEEECCCH---
Confidence            467999999999999999999998874466555432111            01     1111122358999876511   


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                                     .....++..+.+.|+++|=.|+.+-+
T Consensus        61 ---------------~~s~~~~~~~~~~g~~VIDlSadfRl   86 (313)
T PRK11863         61 ---------------DAAREAVALIDNPATRVIDASTAHRT   86 (313)
T ss_pred             ---------------HHHHHHHHHHHhCCCEEEECChhhhc
Confidence                           12334555555678889888887643

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.29  E-value=0.0052  Score=54.43  Aligned_cols=110  Identities=15%  Similarity=0.160  Sum_probs=73.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |+|.|+|+ |.+|..++..|+..|. ++|.+++++..........+...    ........|.  .+..+.|+||.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~--~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY--ADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH--HHhCCCCEEEEccCC
Confidence            68999996 9999999999999884 58999998653222211111111    1123333343  235679999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  ....+.......|......+++.+++.+.  .++.++.
T Consensus        78 ~~--~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          78 NQ--KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            42  23345667788899999999998888764  5555543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.28  E-value=0.002  Score=55.48  Aligned_cols=87  Identities=21%  Similarity=0.347  Sum_probs=52.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~~  112 (346)
                      |+|+|+|++|.+|+.+++.+.+....++.++....+......    ...++. ...|+.+. ..++|+||+++.+.    
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----~~~~i~-~~~dl~~l-l~~~DvVid~t~p~----   71 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----GALGVA-ITDDLEAV-LADADVLIDFTTPE----   71 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----CCCCcc-ccCCHHHh-ccCCCEEEECCCHH----
Confidence            799999999999999999988754377766543222211111    111221 12232221 12689999887211    


Q ss_pred             cccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                                    ....++..|.+.|+++|
T Consensus        72 --------------~~~~~~~~al~~G~~vv   88 (257)
T PRK00048         72 --------------ATLENLEFALEHGKPLV   88 (257)
T ss_pred             --------------HHHHHHHHHHHcCCCEE
Confidence                          23567777888888877

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.26  E-value=0.0017  Score=57.85  Aligned_cols=99  Identities=14%  Similarity=0.234  Sum_probs=60.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCe---EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .++|.|.||||++|+.+++.|.++...+   +..+..... ....+ .+.. ..+.+...|..  ...++|++|.+++..
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~s-aGk~~-~~~~-~~l~v~~~~~~--~~~~~Divf~a~~~~   79 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRS-AGKTV-QFKG-REIIIQEAKIN--SFEGVDIAFFSAGGE   79 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECccc-CCCCe-eeCC-cceEEEeCCHH--HhcCCCEEEECCChH
Confidence            4799999999999999999998655355   444433211 11111 1111 23444444432  335699999876311


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD  153 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~  153 (346)
                                        ....+...+.+.|+.+|=.||.+-+.+
T Consensus        80 ------------------~s~~~~~~~~~~G~~VID~Ss~fR~~~  106 (347)
T PRK06728         80 ------------------VSRQFVNQAVSSGAIVIDNTSEYRMAH  106 (347)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECchhhcCCC
Confidence                              244556666667878888888775543

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.24  E-value=0.00049  Score=59.40  Aligned_cols=74  Identities=12%  Similarity=0.222  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC--CCeeEEecc---cCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHD---VTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~d---~~~~~~~~~d~vi~~a  105 (346)
                      +...++|-|||||.|..++++|..+| .+-.+-.|+.    .++......  +....+.+.   ..+....+.++|+||+
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g-~~~aLAgRs~----~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncv   79 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREG-LTAALAGRSS----AKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCV   79 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcC-CchhhccCCH----HHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecc
Confidence            34579999999999999999999999 7766666743    222222111  122222222   2222334799999999


Q ss_pred             cCCC
Q 019060          106 CPAS  109 (346)
Q Consensus       106 ~~~~  109 (346)
                      |++.
T Consensus        80 GPyt   83 (382)
T COG3268          80 GPYT   83 (382)
T ss_pred             cccc
Confidence            9865

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.24  E-value=0.00016  Score=65.60  Aligned_cols=99  Identities=14%  Similarity=0.197  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc
Q 019060           30 QSNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP   93 (346)
Q Consensus        30 ~~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~   93 (346)
                      ..+++||||||                ||.+|..+++.|..+| .+|+++.+.......        ..+.  ..|+.+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-a~V~~~~g~~~~~~~--------~~~~--~~~v~~~  251 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-ADVTLITGPVSLLTP--------PGVK--SIKVSTA  251 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-CEEEEeCCCCccCCC--------CCcE--EEEeccH
Confidence            34789999999                4689999999999999 999998865321100        1121  1222221


Q ss_pred             ----------ccCCCCEEEEcccCCCccccc---cCh---HHHHHHHHHHHHHHHHHHHHcC
Q 019060           94 ----------LLIEVDQIYHLACPASPIFYK---YNP---VKTIKTNVIGTLNMLGLAKRVG  139 (346)
Q Consensus        94 ----------~~~~~d~vi~~a~~~~~~~~~---~~~---~~~~~~n~~~~~~l~~~~~~~~  139 (346)
                                ...++|++|++||........   ...   ...+..++..+..++...++..
T Consensus       252 ~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       252 EEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             HHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence                      112589999999986543221   111   1223466777788888777654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.23  E-value=0.0058  Score=54.21  Aligned_cols=110  Identities=13%  Similarity=0.070  Sum_probs=71.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCC-----CCeeEE-ecccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGH-----PRFELI-RHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~-~~d~~~~~~~~~d~vi~~  104 (346)
                      +|||.|+|+ |.+|..++..|...| . +|++++++..............     ...++. ..|.  .+..+.|+||.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~-~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~--~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKE-LGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY--EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH--HHHCCCCEEEEC
Confidence            479999998 999999999999888 5 8999998543322211111110     112222 1333  235679999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++...  ....+....+..|......+++.+.+...  .+|.+|-
T Consensus        78 ~~~p~--~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         78 AGVPR--KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             CCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            87532  22334556667888888888888877653  5666654

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.002  Score=56.41  Aligned_cols=101  Identities=13%  Similarity=0.150  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CC---CeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      +++||.|.|||||.|.+|++.|..+...++...+.+.. ....+..... ..   +..+...|.......++|+||.+. 
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~-~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlal-   78 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRER-AGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLAL-   78 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhh-cCCchHHhCcccccccccccccCChhhhhcccCCEEEEec-
Confidence            46899999999999999999999998556555543221 2222222111 11   122223333332333589999765 


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                       .+.                ....++......++++|=+|..+=
T Consensus        79 -Phg----------------~s~~~v~~l~~~g~~VIDLSadfR  105 (349)
T COG0002          79 -PHG----------------VSAELVPELLEAGCKVIDLSADFR  105 (349)
T ss_pred             -Cch----------------hHHHHHHHHHhCCCeEEECCcccc
Confidence             110                133455555566778888887753

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.18  E-value=0.0073  Score=53.64  Aligned_cols=163  Identities=12%  Similarity=0.083  Sum_probs=97.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-C-----eEEEEeCCCCC--CcchhhhhcCC-----CCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d   99 (346)
                      .||.|+|++|.+|++++-.|+..+. .     ++++++.....  .......+...     .+......|  ..+..+.|
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~--~~~~~daD   81 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDP--EEAFKDVD   81 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecCh--HHHhCCCC
Confidence            4899999999999999999998874 3     78888875321  22222211111     122222111  13445799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEeccc---ccCCCCCCCCCCCCcCCCC-CCCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSE---VYGDPLVHPQDESYWGNVN-PIGV  172 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~---v~~~~~~~~~~e~~~~~~~-~~~~  172 (346)
                      +||.+||...  ....+....+..|..-...+...+.+.+.   .+|.+|-..   +|--      -+.     . ...+
T Consensus        82 vVVitAG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~------~k~-----s~g~p~  148 (323)
T TIGR01759        82 AALLVGAFPR--KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA------SKN-----APDIPP  148 (323)
T ss_pred             EEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH------HHH-----cCCCCH
Confidence            9999998642  33467788899999999999998888753   566666421   1100      000     1 1111


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ....|.+....-++-...++..+++..-++-..|+|.+
T Consensus       149 ~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeH  186 (323)
T TIGR01759       149 KNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNH  186 (323)
T ss_pred             HHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecC
Confidence            22344344444444444556667777767666777764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05442 malate dehydrogenase; Provisional

Probab=97.15  E-value=0.0084  Score=53.33  Aligned_cols=163  Identities=9%  Similarity=0.061  Sum_probs=96.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-C-----eEEEEeCCCCC--CcchhhhhcCC-----CCeeEEecccCCcccCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-N-----EVIVVDNYFTG--SKDNLRKWIGH-----PRFELIRHDVTEPLLIEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~-----~V~~~~r~~~~--~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~   98 (346)
                      .+||.|+|++|.+|..++-.|...+. .     ++.+++.+...  .......+...     ..+.+...|  ..+..+.
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~--y~~~~da   81 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDP--NVAFKDA   81 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecCh--HHHhCCC
Confidence            35999999999999999999987663 2     68888874321  11111111110     122222222  1345579


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeccc-----ccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSE-----VYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~-----v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+||-+||...  ....+....+..|..-.+.+.....+..   ..+|.+|-..     +.-+..            ...
T Consensus        82 DiVVitaG~~~--k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s------------~g~  147 (326)
T PRK05442         82 DVALLVGARPR--GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNA------------PDL  147 (326)
T ss_pred             CEEEEeCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHc------------CCC
Confidence            99999998542  3345778889999999999999988843   2677777532     110000            011


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      .+....|.+-...-++-...++..+++..-++-..|+|.+
T Consensus       148 p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeH  187 (326)
T PRK05442        148 PAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNH  187 (326)
T ss_pred             CHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECC
Confidence            1112344344444444445556667766666655667764

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.14  E-value=0.0061  Score=56.15  Aligned_cols=162  Identities=7%  Similarity=0.011  Sum_probs=98.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-------CC-CeEEEEeCCCCCCcchhhhhcCC-----CCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-------EK-NEVIVVDNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-------g~-~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d   99 (346)
                      -||.|+|++|.||.+++-.|+..       +. .+++.++++..........+...     ..+.+...|  ..++.+.|
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~--ye~~kdaD  178 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDP--YEVFQDAE  178 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCC--HHHhCcCC
Confidence            37999999999999999999987       52 36888887654444333332221     122222222  23456799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHH-cCC--eEEEEeccc-----ccCCCCCCCCCCCCcCCCCCCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR-VGA--RILLTSTSE-----VYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~--r~i~~SS~~-----v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +||-+||..  .....+....++.|..-...+.....+ .+.  .+|.+|-..     +.-...+.           +. 
T Consensus       179 iVVitAG~p--rkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~-----------~~-  244 (444)
T PLN00112        179 WALLIGAKP--RGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPN-----------IP-  244 (444)
T ss_pred             EEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCC-----------CC-
Confidence            999999863  233467788899999999999999988 453  677777532     11000000           01 


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ....=..+....-++-...++..++...-|.-..|+|.+
T Consensus       245 ~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeH  283 (444)
T PLN00112        245 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNH  283 (444)
T ss_pred             cceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecC
Confidence            111122233333344444455667777667666778864

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.14  E-value=0.0085  Score=52.88  Aligned_cols=110  Identities=16%  Similarity=0.190  Sum_probs=74.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC------CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG------HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ||.|+|+ |.||..++-.|+..+. .++++++............+..      ...++...+|.  .+..+.|+||-+||
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y--~~~~~aDivvitaG   77 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDY--DDCADADIIVITAG   77 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCH--HHhCCCCEEEECCC
Confidence            5889997 9999999999998885 4788998754433333222221      11344444442  34557999999998


Q ss_pred             CCCccccccC--hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          107 PASPIFYKYN--PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       107 ~~~~~~~~~~--~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      ...  ....+  -...+..|..-.+.+...+.+.+-  .+|.+|-.
T Consensus        78 ~~~--kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNP  121 (307)
T cd05290          78 PSI--DPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNP  121 (307)
T ss_pred             CCC--CCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence            642  12233  477889999999999999998875  56666643

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02602 lactate dehydrogenase

Probab=97.14  E-value=0.0088  Score=53.69  Aligned_cols=110  Identities=15%  Similarity=0.194  Sum_probs=75.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC----CCeeEEe-cccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIR-HDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~-~d~~~~~~~~~d~vi~~a~  106 (346)
                      +||.|+|+ |.||..++-.|+..+. .++.+++.+..........+...    ....+.. .|..  +..+.|+||-+||
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~--~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA--VTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH--HhCCCCEEEECCC
Confidence            69999995 9999999999998875 47888888553332222222111    1223322 2322  2567999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ....+....+..|..-...+.+..++.+-  .+|.+|-
T Consensus       115 ~~~--k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        115 ARQ--IPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            643  23456678889999999999999888764  6777764

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.12  E-value=0.011  Score=52.30  Aligned_cols=110  Identities=15%  Similarity=0.110  Sum_probs=72.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEE-ecccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi~~  104 (346)
                      .|||.|+|+ |++|..++..|...| + +|++++...............     .....+. ..|+.+  ..+.|+||-+
T Consensus         1 ~~KV~VIGa-G~vG~~iA~~la~~g-~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~--~~~aDiVIit   76 (305)
T TIGR01763         1 RKKISVIGA-GFVGATTAFRLAEKE-LADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD--TANSDIVVIT   76 (305)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcC-CCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH--hCCCCEEEEc
Confidence            378999995 999999999999988 5 799998854322211111111     0111222 244433  4579999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +|...  ....+....+..|......+++.+.+...  .+|.+|-
T Consensus        77 ag~p~--~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN  119 (305)
T TIGR01763        77 AGLPR--KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN  119 (305)
T ss_pred             CCCCC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            97532  22345567788999999999998877653  5777665

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.06  E-value=0.0035  Score=58.79  Aligned_cols=74  Identities=19%  Similarity=0.111  Sum_probs=48.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-CCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-EVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~d~vi~~a~~~  108 (346)
                      +++|+|+|++| +|.+.++.|.+.| +.|.+.++........... +...++++..+........ ++|.||...|..
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G-~~V~~~d~~~~~~~~~~~~-l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~   79 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLG-ANVTVNDGKPFSENPEAQE-LLEEGIKVICGSHPLELLDEDFDLMVKNPGIP   79 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCC-CEEEEEcCCCccchhHHHH-HHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence            57899999988 9999999999999 9999998754222222122 2223555544332211112 389999988754

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.03  E-value=0.0041  Score=55.85  Aligned_cols=96  Identities=14%  Similarity=0.125  Sum_probs=55.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe---EEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-cccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~d~vi~~a~~~  108 (346)
                      ++|.|.||||++|+.|++.|+++....   +..+....  .......+.+ ...  ...++.+ ....++|++|.+++. 
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~--sg~~~~~f~g-~~~--~v~~~~~~~~~~~~Divf~a~~~-   75 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ--AGGAAPSFGG-KEG--TLQDAFDIDALKKLDIIITCQGG-   75 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh--hCCcccccCC-Ccc--eEEecCChhHhcCCCEEEECCCH-
Confidence            789999999999999999777776455   55544321  1111111111 111  2223332 233579999987732 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCe--EEEEeccccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEVY  151 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r--~i~~SS~~v~  151 (346)
                                       .....+...+.+.|.+  +|=.||.+-+
T Consensus        76 -----------------~~s~~~~~~~~~aG~~~~VID~Ss~fR~  103 (369)
T PRK06598         76 -----------------DYTNEVYPKLRAAGWQGYWIDAASTLRM  103 (369)
T ss_pred             -----------------HHHHHHHHHHHhCCCCeEEEECChHHhC
Confidence                             1244566666667754  6655655543

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.01  E-value=0.0042  Score=55.60  Aligned_cols=104  Identities=23%  Similarity=0.323  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--------------------cchhhhhcC--CC--CeeEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------------------KDNLRKWIG--HP--RFELI   86 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--------------------~~~~~~~~~--~~--~~~~~   86 (346)
                      .+.+|+|+|+ |.+|+++++.|.+.|..+++++++..-+.                    .+...+.+.  .+  .+..+
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~  101 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAI  101 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            4578999995 99999999999999955899998742110                    000011111  12  24445


Q ss_pred             ecccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           87 RHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        87 ~~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..+++..    ...++|+||.+..                 |...-..+-++|.+.++.+|+.++...+|
T Consensus       102 ~~~~~~~~~~~~~~~~DlVid~~D-----------------n~~~r~~ln~~~~~~~iP~i~~~~~g~~G  154 (339)
T PRK07688        102 VQDVTAEELEELVTGVDLIIDATD-----------------NFETRFIVNDAAQKYGIPWIYGACVGSYG  154 (339)
T ss_pred             eccCCHHHHHHHHcCCCEEEEcCC-----------------CHHHHHHHHHHHHHhCCCEEEEeeeeeee
Confidence            5555432    1236899998751                 12223346678888888999988776665

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.01  E-value=0.018  Score=51.19  Aligned_cols=113  Identities=11%  Similarity=0.085  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      ..+||.|+|| |.+|..++..|...|..++++++++.............     .....+.. .|+.  .+.+.|+||.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~--~l~~ADiVVit   80 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE--DIKDSDVVVIT   80 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH--HhCCCCEEEEC
Confidence            3579999997 99999999998888755788888864332211111110     01122222 2322  45689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      +|...  ....+....+..|......+++.+.+...  .+|.+|-.
T Consensus        81 ag~~~--~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         81 AGVQR--KEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence            97543  23345667788899888888888888764  57777653

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.01  E-value=0.0022  Score=51.98  Aligned_cols=71  Identities=24%  Similarity=0.333  Sum_probs=43.5

Q ss_pred             CCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc--
Q 019060           32 NMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--   93 (346)
Q Consensus        32 ~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~--   93 (346)
                      +++||||+|                ||.+|..|++.+..+| ++|+.+.....-..        ...++.+.....+.  
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~G-a~V~li~g~~~~~~--------p~~~~~i~v~sa~em~   73 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRG-AEVTLIHGPSSLPP--------PPGVKVIRVESAEEML   73 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT--EEEEEE-TTS------------TTEEEEE-SSHHHHH
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCC-CEEEEEecCccccc--------cccceEEEecchhhhh
Confidence            567777765                7999999999999999 99999987531110        13566666554432  


Q ss_pred             -----ccCCCCEEEEcccCCCcc
Q 019060           94 -----LLIEVDQIYHLACPASPI  111 (346)
Q Consensus        94 -----~~~~~d~vi~~a~~~~~~  111 (346)
                           ...+.|++||+|++.+..
T Consensus        74 ~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   74 EAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHGGGGSEEEE-SB--SEE
T ss_pred             hhhccccCcceeEEEecchhhee
Confidence                 223579999999987643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.00  E-value=0.009  Score=50.40  Aligned_cols=96  Identities=20%  Similarity=0.262  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeE-EEEeCCCCCCcc-hhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEV-IVVDNYFTGSKD-NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V-~~~~r~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ++|||+|.|++|-+|+.+++.+.+.+..++ -++.|..+.... ..-.......+.....|-......++|++|.+..+.
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~~~~~~~~~DV~IDFT~P~   80 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDDLLLVKADADVLIDFTTPE   80 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecchhhcccCCCEEEECCCch
Confidence            368999999999999999999998875554 466665432211 111111111122211121233445799999876331


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~  144 (346)
                                        ++...++.|.+.++++|.
T Consensus        81 ------------------~~~~~l~~~~~~~~~lVI   98 (266)
T COG0289          81 ------------------ATLENLEFALEHGKPLVI   98 (266)
T ss_pred             ------------------hhHHHHHHHHHcCCCeEE
Confidence                              466788888888876653

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.00  E-value=0.0037  Score=54.77  Aligned_cols=109  Identities=16%  Similarity=0.190  Sum_probs=58.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-Ce-EEEEeCCCCCCcchhhhhcCCCCeeEEe--cccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NE-VIVVDNYFTGSKDNLRKWIGHPRFELIR--HDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +++|.|.|+||.+|+.+++.|.++.. .. +.++-... +......++... .+..-.  .|..  ...++|++|.++|.
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~r-SaG~~~~~f~~~-~~~v~~~~~~~~--~~~~~Divf~~ag~   76 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASAR-SAGKKYIEFGGK-SIGVPEDAADEF--VFSDVDIVFFAAGG   76 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEeccc-ccCCccccccCc-cccCcccccccc--ccccCCEEEEeCch
Confidence            36899999999999999999999652 23 33332211 111110111111 111111  2222  22369999999853


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCC
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                      .                  ....+...+.+.|+-+|=-||.+-+.++-....+|-
T Consensus        77 ~------------------~s~~~~p~~~~~G~~VIdnsSa~Rm~~DVPLVVPeV  113 (334)
T COG0136          77 S------------------VSKEVEPKAAEAGCVVIDNSSAFRMDPDVPLVVPEV  113 (334)
T ss_pred             H------------------HHHHHHHHHHHcCCEEEeCCcccccCCCCCEecCCc
Confidence            1                  235667777888855554445444443333334443

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.95  E-value=0.0044  Score=52.14  Aligned_cols=67  Identities=19%  Similarity=0.435  Sum_probs=51.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      |+++|.| .|-+|+.+++.|.+.| |.|+++++..    +...+... ......+.+|-+++..+      ++|+++-..
T Consensus         1 m~iiIiG-~G~vG~~va~~L~~~g-~~Vv~Id~d~----~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t   74 (225)
T COG0569           1 MKIIIIG-AGRVGRSVARELSEEG-HNVVLIDRDE----ERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAAT   74 (225)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhCC-CceEEEEcCH----HHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEee
Confidence            6888888 8999999999999999 9999998743    33333222 24677889998887543      699999654

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.95  E-value=0.012  Score=44.24  Aligned_cols=30  Identities=27%  Similarity=0.643  Sum_probs=25.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVV   63 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~   63 (346)
                      +|.|+|++|.+|..+++.|.+...+++.++
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av   30 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVAL   30 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEE
Confidence            588999999999999999999643777776

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.94  E-value=0.013  Score=45.58  Aligned_cols=100  Identities=15%  Similarity=0.157  Sum_probs=61.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc------------------hhhh----hcCCCCeeEEecccC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------------------NLRK----WIGHPRFELIRHDVT   91 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~------------------~~~~----~~~~~~~~~~~~d~~   91 (346)
                      +|+|.|+ |.+|+++++.|...|..++++++...-....                  .+.+    ....-.++.+...+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899995 9999999999999995578888754211100                  0011    111122333444444


Q ss_pred             Cc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060           92 EP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus        92 ~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      ..    ...++|+||.+..                 +......+.+.|++.++.+|..++...+
T Consensus        80 ~~~~~~~~~~~diVi~~~d-----------------~~~~~~~l~~~~~~~~i~~i~~~~~g~~  126 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAID-----------------NIAVRRALNRACKELGIPVIDAGGLGLG  126 (143)
T ss_pred             hhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcCCCcE
Confidence            32    1347999998762                 1223455778899988888888876543

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.92  E-value=0.0057  Score=50.52  Aligned_cols=70  Identities=16%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+++|||+|| |-+|...++.|++.| +.|+++.+.   ....+..+.....+.+....+......++|.||-+.
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~g-a~V~VIs~~---~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYG-AHIVVISPE---LTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEcCC---CCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcC
Confidence            4789999995 999999999999999 999998753   222333333334566666655555566789888643

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.89  E-value=0.017  Score=47.64  Aligned_cols=104  Identities=13%  Similarity=0.269  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch------------------------hhhhcCCCCeeEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN------------------------LRKWIGHPRFELI   86 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~------------------------~~~~~~~~~~~~~   86 (346)
                      .+.+|+|.|++| +|.++++.|...|..++++++...-....-                        +++.-..-+++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            357999999777 999999999999977899987642110000                        1111111123334


Q ss_pred             ecccCC-----c-ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           87 RHDVTE-----P-LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        87 ~~d~~~-----~-~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..++.+     . ...++|+||.+..                 +......+-+.|++.++.+|+.++...+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G  151 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEE-----------------NYERTAKVNDVCRKHHIPFISCATYGLIG  151 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            444431     1 1236888886541                 11223346688999998999998877665

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.85  E-value=0.0069  Score=53.71  Aligned_cols=33  Identities=24%  Similarity=0.256  Sum_probs=30.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+| .|.+|..++..|+++| ++|++++|+.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G-~~V~v~d~~~   35 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAG-HEVRLWDADP   35 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCC-CeeEEEeCCH
Confidence            6899999 9999999999999999 9999999864

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.84  E-value=0.011  Score=53.47  Aligned_cols=162  Identities=9%  Similarity=0.021  Sum_probs=93.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe----EEE--E--eCCCCCCcchhhhhcCC-----CCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE----VIV--V--DNYFTGSKDNLRKWIGH-----PRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~----V~~--~--~r~~~~~~~~~~~~~~~-----~~~~~~~~d~~~~~~~~~d   99 (346)
                      -||.|+|++|.+|.+++-.|...+...    |.+  +  +++..........+...     .++.+...|  ..++.+.|
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~--y~~~kdaD  122 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDP--YEVFEDAD  122 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCC--HHHhCCCC
Confidence            489999999999999999999887422    333  3  55443332222222111     122222222  23456799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeccc-----ccCCCCCCCCCCCCcCCCCCCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSE-----VYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~-----v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +||.+||...  ....+....+..|..-.+.+...+.+..   .++|.+|-..     +.-+..+.           ++ 
T Consensus       123 IVVitAG~pr--kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~sg~-----------~~-  188 (387)
T TIGR01757       123 WALLIGAKPR--GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNAPN-----------IP-  188 (387)
T ss_pred             EEEECCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHcCC-----------Cc-
Confidence            9999998642  3345777888999999999999998843   2677777532     11110000           11 


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ....=+.+....-++-...++..+++..-++-..|+|.+
T Consensus       189 ~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeH  227 (387)
T TIGR01757       189 RKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNH  227 (387)
T ss_pred             ccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecC
Confidence            111112233344444444555566666666666677764

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.83  E-value=0.035  Score=49.40  Aligned_cols=114  Identities=11%  Similarity=0.053  Sum_probs=74.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~~a  105 (346)
                      .+||.|+| .|.+|..++..|+..|..+|++++++.............     ....++.. .|+  .+..+.|+||.++
T Consensus         6 ~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~--~~l~~aDiVI~ta   82 (321)
T PTZ00082          6 RRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY--EDIAGSDVVIVTA   82 (321)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH--HHhCCCCEEEECC
Confidence            46999999 699999999999888843788888765432211111111     11233332 444  3456899999999


Q ss_pred             cCCCcccc---ccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          106 CPASPIFY---KYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       106 ~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      +.......   +.+..+.+..|......+++.+.+...  .+|.+|-.
T Consensus        83 g~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP  130 (321)
T PTZ00082         83 GLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNP  130 (321)
T ss_pred             CCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence            86432111   114566778899888889888888764  57777753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.83  E-value=0.0028  Score=55.60  Aligned_cols=76  Identities=11%  Similarity=0.090  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC--CCcchhhhhcCC--CCeeEEecccCCccc-----CCCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGH--PRFELIRHDVTEPLL-----IEVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~~~~~--~~~~~~~~d~~~~~~-----~~~d~v  101 (346)
                      .+++++|+|+ |.+|++++..|.+.|..+|++++|+..  .+.+.+.+.+..  ..+.....|+.+...     ..+|+|
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            4678999998 899999999999999335999999641  122222222211  233445566655322     257999


Q ss_pred             EEcccC
Q 019060          102 YHLACP  107 (346)
Q Consensus       102 i~~a~~  107 (346)
                      ||+-..
T Consensus       204 INaTp~  209 (289)
T PRK12548        204 VNATLV  209 (289)
T ss_pred             EEeCCC
Confidence            997643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.81  E-value=0.009  Score=53.50  Aligned_cols=104  Identities=21%  Similarity=0.290  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--------------------c----chhhhhcCCCCeeEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------------------K----DNLRKWIGHPRFELI   86 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--------------------~----~~~~~~~~~~~~~~~   86 (346)
                      .+++|+|+|+ |.+|+++++.|.+.|...++++++..-+.                    .    +.+.+....-.++.+
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~  101 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPV  101 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEE
Confidence            4578999995 67999999999999955888888753110                    0    001111111234445


Q ss_pred             ecccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           87 RHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        87 ~~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..|++..    ...++|+||.+..         +        ...-..+-+.|.+.++.+|+.+....+|
T Consensus       102 ~~~~~~~~~~~~~~~~DlVid~~D---------~--------~~~r~~in~~~~~~~ip~i~~~~~g~~G  154 (338)
T PRK12475        102 VTDVTVEELEELVKEVDLIIDATD---------N--------FDTRLLINDLSQKYNIPWIYGGCVGSYG  154 (338)
T ss_pred             eccCCHHHHHHHhcCCCEEEEcCC---------C--------HHHHHHHHHHHHHcCCCEEEEEecccEE
Confidence            5555422    1236999998751         1        1112235577888888899888766555

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=96.77  E-value=0.0046  Score=55.32  Aligned_cols=97  Identities=14%  Similarity=0.093  Sum_probs=56.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe---EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a~~~  108 (346)
                      |+|.|.||||.+|+.+++.|..+....   ++.+....  .......+ .....  ...++.+. .+.++|++|.+++. 
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~--s~g~~~~f-~~~~~--~v~~~~~~~~~~~vDivffa~g~-   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQ--LGQAAPSF-GGTTG--TLQDAFDIDALKALDIIITCQGG-   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchh--hCCCcCCC-CCCcc--eEEcCcccccccCCCEEEEcCCH-
Confidence            589999999999999999999443244   33333211  11111111 11122  33344443 55689999998842 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccC
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYG  152 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~  152 (346)
                                       ..+..+...+.+.|.  .+|=-||..-..
T Consensus        75 -----------------~~s~~~~p~~~~aG~~~~VIDnSSa~Rmd  103 (366)
T TIGR01745        75 -----------------DYTNEIYPKLRESGWQGYWIDAASSLRMK  103 (366)
T ss_pred             -----------------HHHHHHHHHHHhCCCCeEEEECChhhhcC
Confidence                             135567777888884  455555554333

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.76  E-value=0.0099  Score=56.28  Aligned_cols=75  Identities=20%  Similarity=0.148  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++|+|+| .|.+|..+++.|.+.| ++|+++++..........+.+...++++..++... ...++|.||...|..
T Consensus        15 ~~~~v~viG-~G~~G~~~A~~L~~~G-~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         15 QGLRVVVAG-LGVSGFAAADALLELG-ARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-LPEDTDLVVTSPGWR   89 (480)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-ccCCCCEEEECCCcC
Confidence            467999999 5889999999999999 99999986543222233333444467776554332 334689999877653

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.76  E-value=0.0053  Score=62.36  Aligned_cols=71  Identities=20%  Similarity=0.274  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCe-------------EEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNE-------------VIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~-------------V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-   95 (346)
                      .+++|+|+|+ |++|+.+++.|.+....+             |.+.++..    +...+... .++++.+..|+.|.+. 
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~----~~a~~la~~~~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL----KDAKETVEGIENAEAVQLDVSDSESL  642 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH----HHHHHHHHhcCCCceEEeecCCHHHH
Confidence            3579999995 999999999999875334             66666532    12222211 2356778888777532 


Q ss_pred             ----CCCCEEEEccc
Q 019060           96 ----IEVDQIYHLAC  106 (346)
Q Consensus        96 ----~~~d~vi~~a~  106 (346)
                          .++|+||++..
T Consensus       643 ~~~v~~~DaVIsalP  657 (1042)
T PLN02819        643 LKYVSQVDVVISLLP  657 (1042)
T ss_pred             HHhhcCCCEEEECCC
Confidence                36999999874

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.75  E-value=0.018  Score=47.32  Aligned_cols=104  Identities=17%  Similarity=0.347  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc----------------------hhhhhcCCCCeeEEec
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRH   88 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~   88 (346)
                      .+.+|+|.|+.| +|.++++.|...|...+++++...-....                      .+.+.-..-.++....
T Consensus        20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~   98 (197)
T cd01492          20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTD   98 (197)
T ss_pred             HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEec
Confidence            357999999666 99999999999997788888754211100                      0111111113333333


Q ss_pred             ccCCc---ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           89 DVTEP---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        89 d~~~~---~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .+.+.   -..++|+||.+..                 +......+-+.|++.++.+|+.++...+|
T Consensus        99 ~~~~~~~~~~~~~dvVi~~~~-----------------~~~~~~~ln~~c~~~~ip~i~~~~~G~~G  148 (197)
T cd01492          99 DISEKPEEFFSQFDVVVATEL-----------------SRAELVKINELCRKLGVKFYATGVHGLFG  148 (197)
T ss_pred             CccccHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecCCEE
Confidence            33321   1236899997641                 11223345578899898999888876655

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.70  E-value=0.021  Score=43.91  Aligned_cols=102  Identities=23%  Similarity=0.362  Sum_probs=62.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-----------------------hcCCCCeeEEec
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-----------------------WIGHPRFELIRH   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-----------------------~~~~~~~~~~~~   88 (346)
                      +++|+|.| .|.+|+.+++.|...|..++++++...-. ...+.+                       ....-+++.+..
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~-~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~   79 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVE-PSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE   79 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB--GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCccee-ecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence            46899999 88899999999999995588888764211 111110                       011123445555


Q ss_pred             ccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        89 d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ++...    ...++|+||.+...                 ...-..+.+.|++.+..+|+.++...+|
T Consensus        80 ~~~~~~~~~~~~~~d~vi~~~d~-----------------~~~~~~l~~~~~~~~~p~i~~~~~g~~G  130 (135)
T PF00899_consen   80 KIDEENIEELLKDYDIVIDCVDS-----------------LAARLLLNEICREYGIPFIDAGVNGFYG  130 (135)
T ss_dssp             HCSHHHHHHHHHTSSEEEEESSS-----------------HHHHHHHHHHHHHTT-EEEEEEEETTEE
T ss_pred             ccccccccccccCCCEEEEecCC-----------------HHHHHHHHHHHHHcCCCEEEEEeecCEE
Confidence            55322    11269999987521                 2233456678999888998888765544

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.68  E-value=0.031  Score=48.35  Aligned_cols=111  Identities=17%  Similarity=0.111  Sum_probs=72.0

Q ss_pred             EEEEcCchhHHHHHHHHHHhcC--C-CeEEEEeCCCCCCcchhhhhc--CCC--CeeEEecccCCcccCCCCEEEEcccC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENE--K-NEVIVVDNYFTGSKDNLRKWI--GHP--RFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g--~-~~V~~~~r~~~~~~~~~~~~~--~~~--~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |.|+|++|.+|..++..|+..+  . .++.+++++..........+.  ...  ..++...+-...+..++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5789999999999999998877  3 588899876533222222111  111  22332222113445689999999976


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ...........|+.....+++.+++...  .+|.+|-
T Consensus        81 ~~~--~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          81 GRK--PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            432  2334556778899999999999988764  5666653

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=96.66  E-value=0.062  Score=41.73  Aligned_cols=138  Identities=20%  Similarity=0.150  Sum_probs=75.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCee-EEeccc--CCc------------ccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDV--TEP------------LLI   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~d~--~~~------------~~~   96 (346)
                      ..||+|.||-|-+|+..++++.+++ |-|.-++-......          ... ++..|-  ++.            ...
T Consensus         3 agrVivYGGkGALGSacv~~Fkann-ywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANN-YWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcC-eEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            4589999999999999999999999 88877664321111          111 111111  110            112


Q ss_pred             CCCEEEEcccCCCcc-c----cccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeccc-ccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSE-VYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~-v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|.||+.||..... .    ...+.+..+...+....--...+-+. .. -++.+..+. ..+                
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~----------------  135 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALG----------------  135 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccC----------------
Confidence            599999999753211 1    11233334443333222112222221 11 244443332 221                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH-hCC
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ-HGI  196 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~  196 (346)
                      +....-.||..|.+..++..+++.+ +++
T Consensus       136 gTPgMIGYGMAKaAVHqLt~SLaak~SGl  164 (236)
T KOG4022|consen  136 GTPGMIGYGMAKAAVHQLTSSLAAKDSGL  164 (236)
T ss_pred             CCCcccchhHHHHHHHHHHHHhcccccCC
Confidence            2233356999999999999988655 344

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.66  E-value=0.0037  Score=50.97  Aligned_cols=67  Identities=24%  Similarity=0.189  Sum_probs=43.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |++.| ||+|-||..|+++|.+.| |+|.+-.|+.++..+...+.+.. .   +.+--........|+||...
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag-~eV~igs~r~~~~~~a~a~~l~~-~---i~~~~~~dA~~~aDVVvLAV   68 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAG-HEVIIGSSRGPKALAAAAAALGP-L---ITGGSNEDAAALADVVVLAV   68 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCC-CeEEEecCCChhHHHHHHHhhcc-c---cccCChHHHHhcCCEEEEec
Confidence            45555 669999999999999999 99999987665555554443321 1   12111122233589998754

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.64  E-value=0.0039  Score=55.66  Aligned_cols=98  Identities=16%  Similarity=0.101  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-----cCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~vi~~a  105 (346)
                      .+.+|||+||+|.+|...++.+...| ..++++..+..+.. .++++....-+.+...|+.+..     ..++|+|+...
T Consensus       142 ~g~~VLV~gaaGgVG~~aiQlAk~~G-~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v  219 (326)
T COG0604         142 PGETVLVHGAAGGVGSAAIQLAKALG-ATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTV  219 (326)
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHcC-CcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence            37899999999999999999999999 56666554332222 3333322223333344433321     13699999877


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      |..                  .....+++++.. .+++.+....
T Consensus       220 G~~------------------~~~~~l~~l~~~-G~lv~ig~~~  244 (326)
T COG0604         220 GGD------------------TFAASLAALAPG-GRLVSIGALS  244 (326)
T ss_pred             CHH------------------HHHHHHHHhccC-CEEEEEecCC
Confidence            421                  122345555554 4888777654

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.63  E-value=0.013  Score=51.28  Aligned_cols=82  Identities=16%  Similarity=0.168  Sum_probs=52.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFY  113 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~~~  113 (346)
                      +|.|.|+|||.|..|++.|..+...++..+.....              +.  ..|. +....++|++|.+...      
T Consensus         3 ~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~--~~~~-~~~~~~~D~vFlalp~------   59 (310)
T TIGR01851         3 KVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KD--AAER-AKLLNAADVAILCLPD------   59 (310)
T ss_pred             eEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cC--cCCH-hHhhcCCCEEEECCCH------
Confidence            79999999999999999999987556666542210              00  0011 1111358999876621      


Q ss_pred             ccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          114 KYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       114 ~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                                  .....++..+.+.++++|=.|+.+-
T Consensus        60 ------------~~s~~~~~~~~~~g~~VIDlSadfR   84 (310)
T TIGR01851        60 ------------DAAREAVSLVDNPNTCIIDASTAYR   84 (310)
T ss_pred             ------------HHHHHHHHHHHhCCCEEEECChHHh
Confidence                        0233455555566788988887753

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.60  E-value=0.005  Score=57.83  Aligned_cols=67  Identities=22%  Similarity=0.398  Sum_probs=49.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~~a  105 (346)
                      |+|+|+|+ |.+|+++++.|.+.| ++|++++++.    +.........+++.+.+|.++..      ..++|.||-+.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g-~~v~vid~~~----~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGEN-NDVTVIDTDE----ERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CcEEEEECCH----HHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            68999996 999999999999999 9999998743    22322222246788888887653      33688888764

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.59  E-value=0.03  Score=49.45  Aligned_cols=109  Identities=17%  Similarity=0.138  Sum_probs=71.8

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC--C--CCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG--H--PRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      |.|+|+ |.+|..++-.|+..|. +++++++++..........+..  .  .......++- ..+..+.|+||.++|...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p~   78 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAPR   78 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCCC
Confidence            467885 8899999999998875 5799999864332222222111  0  1123332221 235567999999997543


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                        ....+....+..|+...+.+.+..++.+.  .+|.+|-
T Consensus        79 --~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          79 --KPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence              23456677888999999999999988764  6776664

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.56  E-value=0.004  Score=52.25  Aligned_cols=34  Identities=32%  Similarity=0.484  Sum_probs=31.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+||+|.+|+.++..|.+.| ++|.+.+|+.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G-~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAG-NKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCC-CEEEEEEcCH
Confidence            689999999999999999999999 9999998854

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.56  E-value=0.022  Score=49.45  Aligned_cols=103  Identities=15%  Similarity=0.219  Sum_probs=66.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc----------------------hhhhhcCCCCeeEEecc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRHD   89 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~d   89 (346)
                      +.+|||.| .|.+|.++++.|...|...+++++...-....                      .+.++-..-.++.+...
T Consensus        19 ~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~   97 (286)
T cd01491          19 KSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP   97 (286)
T ss_pred             cCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            56899999 67899999999999997788888754211110                      01111112234445544


Q ss_pred             cCCcccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        90 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      +......++|+||.+..                 +......+-++|++.++.||...+...+|
T Consensus        98 ~~~~~l~~fdvVV~~~~-----------------~~~~~~~in~~c~~~~ipfI~a~~~G~~G  143 (286)
T cd01491          98 LTTDELLKFQVVVLTDA-----------------SLEDQLKINEFCHSPGIKFISADTRGLFG  143 (286)
T ss_pred             CCHHHHhcCCEEEEecC-----------------CHHHHHHHHHHHHHcCCEEEEEeccccEE
Confidence            44444457999887652                 12233456688999888999988877766

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK06901 aspartate-semialdehyde dehydrogenase; Provisional

Probab=96.54  E-value=0.018  Score=50.40  Aligned_cols=226  Identities=8%  Similarity=-0.021  Sum_probs=114.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCe---EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNE---VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .++|.| ||||-+|+.+.+.|.+++ ..   ++++.... ........+   .+-++...++....+.++|+++. +|..
T Consensus         3 ~~~iAi-GATg~VG~~~l~~Leer~-fpv~~l~l~~s~~-~s~gk~i~f---~g~~~~V~~l~~~~f~~vDia~f-ag~~   75 (322)
T PRK06901          3 TLNIAI-AAEFELSEKLLEALEQSD-LEIEQISIVEIEP-FGEEQGIRF---NNKAVEQIAPEEVEWADFNYVFF-AGKM   75 (322)
T ss_pred             cceEEE-ecCcHHHHHHHHHHHhcC-Cchhheeeccccc-ccCCCEEEE---CCEEEEEEECCccCcccCCEEEE-cCHH
Confidence            468999 999999999999999988 54   44443210 011111111   12344445566666778999998 6421


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCC----CCchHHhHHHHH
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV----RSCYDEGKRVAE  184 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~----~~~Y~~sK~~~E  184 (346)
                                        ........+.+.|+.+|=-||.+-+..+-....+|--.........    -++=. +-..+-
T Consensus        76 ------------------~s~~~ap~a~~aG~~VIDnSsa~Rmd~dVPLVVPEVN~e~l~~~~~~~IIanPNC-sTi~l~  136 (322)
T PRK06901         76 ------------------AQAEHLAQAAEAGCIVIDLYGICAALANVPVVVPSVNDEQLAELRQRNIVSLPDP-QVSQLA  136 (322)
T ss_pred             ------------------HHHHHHHHHHHCCCEEEECChHhhCCCCCCeecccCCHHHHhcCcCCCEEECCcH-HHHHHH
Confidence                              2445666777888888888888766544444444431110000000    01111 112222


Q ss_pred             HHHHHHHHHhCCceEEEEecc-ccCCCCCCCCccHHHHHH---HHHHcCCCeEEecCCcceeecccHHH--HHHHHHHHH
Q 019060          185 TLMFDYHRQHGIEIRIARIFN-TYGPRMNIDDGRVVSNFI---AQAIRGEPLTVQAPGTQTRSFCYVSD--MVDGLIRLM  258 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~-i~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~v~D--va~~i~~~~  258 (346)
                      ..+.-+.+..+++-+++-... +-|.+.     .-+..+.   .....+.+... ......++.+..-|  +.+=.-+++
T Consensus       137 ~aL~pL~~~~~l~rv~VsTyQavSGaG~-----~gv~eL~~qt~~~~n~~~~~~-~~~~iAFNviP~ig~~m~~EtrKIl  210 (322)
T PRK06901        137 LALAPFLQEQPLSQIFVTSLLPASYTDA-----ETVKKLAGQTARLLNGIPLDE-EEQRLAFDVFPANAQNLELQLQKIF  210 (322)
T ss_pred             HHHHHHHHhcCCcEEEEEeecchhhcCH-----hHHHHHHHHHHHHhCCCCCCC-CceeeeccccccCCccHHHHHHHHh
Confidence            223333434566544444332 333331     1123332   22334433211 11111233333332  333333444


Q ss_pred             hCC-----------C----CCcEEecCCCCCCHHHHHHHHHHHcCC
Q 019060          259 EGE-----------N----TGPINIGNPGEFTMLELAENVKELINP  289 (346)
Q Consensus       259 ~~~-----------~----~~~~~~~~~~~~s~~ei~~~i~~~~g~  289 (346)
                      ..-           .    ....++...++++..++.+.+.+.-|.
T Consensus       211 ~~l~~VsaTcVRVPV~~GHs~sV~ve~e~~~~~e~~~~~l~~~~gv  256 (322)
T PRK06901        211 PQLENVTFHSIQVPVFYGLAQMVTALSEYELDIESQLAEWQQNNLL  256 (322)
T ss_pred             CCcccEEEEEEEcceeccEEEEEEEEECCCCCHHHHHHHHHhCCCc
Confidence            211           1    235777777899999999999886553

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.45  E-value=0.038  Score=45.73  Aligned_cols=69  Identities=12%  Similarity=0.134  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      .+++|||+| .|-+|..-++.|++.| ..|++++...   ...+..+....++.++..+.......+++.||-+
T Consensus         8 ~gk~vlVvG-gG~va~rk~~~Ll~~g-a~VtVvsp~~---~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~a   76 (205)
T TIGR01470         8 EGRAVLVVG-GGDVALRKARLLLKAG-AQLRVIAEEL---ESELTLLAEQGGITWLARCFDADILEGAFLVIAA   76 (205)
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCC-CEEEEEcCCC---CHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEEC
Confidence            468999999 7999999999999999 9999987532   2334444444578888888776666678887743

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=96.38  E-value=0.027  Score=50.62  Aligned_cols=96  Identities=15%  Similarity=0.191  Sum_probs=56.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---------------CCCeeEEecccCCcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---------------HPRFELIRHDVTEPLLI   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~d~~~~~~~   96 (346)
                      ++||.|.|. |.||+.+++.+.++...+++++....+.....+....+               ..++. +..+.. ....
T Consensus         1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~-V~~~~~-el~~   77 (341)
T PRK04207          1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIP-VAGTIE-DLLE   77 (341)
T ss_pred             CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceE-EcCChh-Hhhc
Confidence            368999998 99999999998877657887776532211111111000               00111 112211 1223


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                      ++|+||.+.+...                  ....+..+.+.|+++|+-++.
T Consensus        78 ~vDVVIdaT~~~~------------------~~e~a~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         78 KADIVVDATPGGV------------------GAKNKELYEKAGVKAIFQGGE  111 (341)
T ss_pred             cCCEEEECCCchh------------------hHHHHHHHHHCCCEEEEcCCC
Confidence            6999999874321                  334556777778788777764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.38  E-value=0.031  Score=46.20  Aligned_cols=103  Identities=19%  Similarity=0.271  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-------------------hcC--CCC--eeEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-------------------WIG--HPR--FELIR   87 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------------------~~~--~~~--~~~~~   87 (346)
                      .+.+|+|.| .|.+|+++++.|...|..++++++...-+. ..+.+                   .+.  .+.  ++.+.
T Consensus        20 ~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        20 LNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDL-SNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             cCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcc-cchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            456899999 889999999999999966899988752111 01111                   110  122  33333


Q ss_pred             cccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        88 ~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..+...    ...++|+||.+..                 |...-..+-+.|++.++.+|+.++...+|
T Consensus        98 ~~i~~~~~~~~~~~~D~Vi~~~d-----------------~~~~r~~l~~~~~~~~ip~i~~~~~g~~G  149 (202)
T TIGR02356        98 ERVTAENLELLINNVDLVLDCTD-----------------NFATRYLINDACVALGTPLISAAVVGFGG  149 (202)
T ss_pred             hcCCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCeE
Confidence            333322    1236999998752                 11223346678888888898888655544

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.35  E-value=0.025  Score=47.73  Aligned_cols=103  Identities=19%  Similarity=0.268  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-------------------hcC--CC--CeeEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-------------------WIG--HP--RFELIR   87 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------------------~~~--~~--~~~~~~   87 (346)
                      .+.+|+|.| .|.+|+++++.|...|...+++++...-.. ..+.+                   .+.  .+  .++.+.
T Consensus        20 ~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          20 KNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVEL-SNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcC-cccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            357999999 888999999999999966888886532110 01110                   000  12  344444


Q ss_pred             cccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        88 ~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..+...    ...++|+||.+...                 ...-..+-+.|++.++.+|+.+....+|
T Consensus        98 ~~i~~~~~~~~~~~~DvVi~~~d~-----------------~~~r~~l~~~~~~~~ip~i~~g~~g~~g  149 (228)
T cd00757          98 ERLDAENAEELIAGYDLVLDCTDN-----------------FATRYLINDACVKLGKPLVSGAVLGFEG  149 (228)
T ss_pred             ceeCHHHHHHHHhCCCEEEEcCCC-----------------HHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            444221    12369999987621                 1122346678888888888887655444

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.34  E-value=0.011  Score=51.36  Aligned_cols=73  Identities=19%  Similarity=0.306  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++++|+|+ |.+|+.++..|.+.| ++|++++|+..+. +.+.+.+.. .......  +.+....++|+||++.+..
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g-~~v~v~~R~~~~~-~~la~~~~~~~~~~~~~--~~~~~~~~~DivInatp~g  189 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKAD-CNVIIANRTVSKA-EELAERFQRYGEIQAFS--MDELPLHRVDLIINATSAG  189 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCC-CEEEEEeCCHHHH-HHHHHHHhhcCceEEec--hhhhcccCccEEEECCCCC
Confidence            3678999997 899999999999999 8999999864322 222222211 1122222  2222234689999988643

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.34  E-value=0.039  Score=47.73  Aligned_cols=95  Identities=20%  Similarity=0.348  Sum_probs=54.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCC-cchhhhhcCC--CCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGS-KDNLRKWIGH--PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~-~~~~~~~~~~--~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      |+|.|+|++|.+|+.+++.+.+....++.++ +|..+.. ..........  .++. +..|+... ..++|+||.+..+ 
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~-~~~d~~~l-~~~~DvVIdfT~p-   78 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIGKVGVP-VTDDLEAV-ETDPDVLIDFTTP-   78 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcCcCCce-eeCCHHHh-cCCCCEEEECCCh-
Confidence            6999999999999999999987643676654 4433221 1111111111  1121 22333222 2358999987621 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                       .....++..|.+.|+++|.-++
T Consensus        79 -----------------~~~~~~~~~al~~g~~vVigtt  100 (266)
T TIGR00036        79 -----------------EGVLNHLKFALEHGVRLVVGTT  100 (266)
T ss_pred             -----------------HHHHHHHHHHHHCCCCEEEECC
Confidence                             1345667777777777664333

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.34  E-value=0.023  Score=53.48  Aligned_cols=74  Identities=16%  Similarity=0.148  Sum_probs=49.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +++|+|+| .|..|..+++.|.+.| ++|++.++............+...++.+..++.......++|.||...|.
T Consensus        14 ~~~i~v~G-~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi   87 (458)
T PRK01710         14 NKKVAVVG-IGVSNIPLIKFLVKLG-AKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM   87 (458)
T ss_pred             CCeEEEEc-ccHHHHHHHHHHHHCC-CEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence            56899988 8889999999999999 99999997543221111111223356666554332223468999987654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.26  E-value=0.012  Score=51.45  Aligned_cols=73  Identities=22%  Similarity=0.340  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCC-CeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP-RFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+++++|+|+ |.+|+.++..|...|..+|++++|+.... +.+.+.+... .+.+ ..+. .....++|+||++...
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a-~~l~~~~~~~~~~~~-~~~~-~~~~~~~DivInaTp~  195 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA-EELAKLFGALGKAEL-DLEL-QEELADFDLIINATSA  195 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHhhhccceee-cccc-hhccccCCEEEECCcC
Confidence            4678999995 99999999999999966899999964222 2222222111 1222 1111 1223468999998753

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.23  E-value=0.052  Score=46.23  Aligned_cols=89  Identities=16%  Similarity=0.088  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-------cCCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~d~vi~  103 (346)
                      |+|+|||+|||+= |+.|++.|.+.| +.|++..-.....       .....+....+-+.+.+       ..+++.||+
T Consensus         1 ~~~~IlvlgGT~e-gr~la~~L~~~g-~~v~~Svat~~g~-------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VID   71 (248)
T PRK08057          1 MMPRILLLGGTSE-ARALARALAAAG-VDIVLSLAGRTGG-------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVID   71 (248)
T ss_pred             CCceEEEEechHH-HHHHHHHHHhCC-CeEEEEEccCCCC-------cccCCceEEECCCCCHHHHHHHHHHCCCCEEEE
Confidence            4678999999986 999999999999 8776654432111       11235566666663332       226999998


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                      ..=++               ...-..++.++|++.++.++
T Consensus        72 ATHPf---------------A~~is~~a~~ac~~~~ipyi   96 (248)
T PRK08057         72 ATHPY---------------AAQISANAAAACRALGIPYL   96 (248)
T ss_pred             CCCcc---------------HHHHHHHHHHHHHHhCCcEE
Confidence            65111               23456788999999998544

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.19  E-value=0.015  Score=45.80  Aligned_cols=75  Identities=21%  Similarity=0.307  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ..++|+|+|+ |.+|+.+++.|.+.|.++|.+++|+..... ...+.+....+.....|..+ ...++|+||.+....
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~Dvvi~~~~~~   92 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAK-ALAERFGELGIAIAYLDLEE-LLAEADLIINTTPVG   92 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHH-HHHHHHhhcccceeecchhh-ccccCCEEEeCcCCC
Confidence            3679999996 999999999999985378999988542221 11111111101111122211 134699999988544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=96.19  E-value=0.012  Score=59.24  Aligned_cols=159  Identities=13%  Similarity=0.163  Sum_probs=98.9

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc--ch-hhhhcCCCCeeEEecccCCcccC---------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DN-LRKWIGHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~-~~~~~~~~~~~~~~~d~~~~~~~---------   96 (346)
                      ....+..+|+||-|..|.+|++-|+.+|...++..+|+.-+..  .. ..+|.. .++. ++.|..+....         
T Consensus      1765 ~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-~GVq-V~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1765 CHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-RGVQ-VQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             cCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-cCeE-EEEecccchhhhhHHHHHHH
Confidence            3457899999999999999999999999445556666532211  11 122322 2333 33333332111         


Q ss_pred             -----CCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -----EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -----~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                           -+-.|||+|..--....+    .+.....+.-+.++.++=...++.--   -||.+||...--            
T Consensus      1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGR------------ 1910 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGR------------ 1910 (2376)
T ss_pred             hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccC------------
Confidence                 277888888743322222    23344445567788887777776542   599999986421            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccc
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT  206 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i  206 (346)
                          .....+.||.+-..+|++++... ..+++-+.+.-|.|
T Consensus      1911 ----GN~GQtNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1911 ----GNAGQTNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             ----CCCcccccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                11223569999999999998754 44787777776655

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.18  E-value=0.02  Score=47.29  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=43.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+|+|+|+|. |-+|+++++.|.+.| ++|++.+++.    +........-+...+.  ..+....++|+++.+|
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G-~~Vvv~D~~~----~~~~~~~~~~g~~~v~--~~~l~~~~~Dv~vp~A   93 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEG-AKLIVADINE----EAVARAAELFGATVVA--PEEIYSVDADVFAPCA   93 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEcCCH----HHHHHHHHHcCCEEEc--chhhccccCCEEEecc
Confidence            4689999995 789999999999999 9999888743    2222211111223222  2222223699999876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.16  E-value=0.016  Score=46.20  Aligned_cols=36  Identities=19%  Similarity=0.389  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -.+++|+|+|+++.+|..+++.|.+.| ..|+++.|+
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g-~~V~v~~r~   77 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRN-ATVTVCHSK   77 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCC-CEEEEEECC
Confidence            357899999998889999999999999 789998885

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.11  E-value=0.067  Score=45.67  Aligned_cols=103  Identities=16%  Similarity=0.105  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch----------------------hhhhcCCCCeeEEec
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----------------------LRKWIGHPRFELIRH   88 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~----------------------~~~~~~~~~~~~~~~   88 (346)
                      .+.+|+|.|+ |.+|+++++.|...|..++++++...-....-                      +.+....-.++.+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            3579999996 99999999999999966888887642111100                      001111113333444


Q ss_pred             ccCCcc----cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060           89 DVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus        89 d~~~~~----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      .+....    ..++|+||.+..         +        ...-..+-++|++.++.+|+.++...+
T Consensus       110 ~i~~~~~~~~~~~~DiVi~~~D---------~--------~~~r~~ln~~~~~~~ip~v~~~~~g~~  159 (245)
T PRK05690        110 RLDDDELAALIAGHDLVLDCTD---------N--------VATRNQLNRACFAAKKPLVSGAAIRME  159 (245)
T ss_pred             cCCHHHHHHHHhcCCEEEecCC---------C--------HHHHHHHHHHHHHhCCEEEEeeeccCC
Confidence            443321    236999998761         1        112234567788888888876554433

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=96.09  E-value=0.036  Score=51.13  Aligned_cols=74  Identities=19%  Similarity=0.097  Sum_probs=52.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +|+|+|.| -|--|.++++.|.+.| +.|++.+.+... ..........+++++..+...+.....+|.||-+=|..
T Consensus         7 ~~kv~V~G-LG~sG~a~a~~L~~~G-~~v~v~D~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~   80 (448)
T COG0771           7 GKKVLVLG-LGKSGLAAARFLLKLG-AEVTVSDDRPAP-EGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIP   80 (448)
T ss_pred             CCEEEEEe-cccccHHHHHHHHHCC-CeEEEEcCCCCc-cchhhhhhhccCceeecCccchhccccCCEEEECCCCC
Confidence            78999999 8899999999999999 999999864433 11111122235677777665555555789999866543

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.08  E-value=0.071  Score=47.10  Aligned_cols=107  Identities=14%  Similarity=0.084  Sum_probs=68.1

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEE-ecccCCcccCCCCEEEEcccC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |.|+|+ |.+|..++..|...+ . +|++++++.............     ....++. ..|.  .+..+.|+||.+++.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~-l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~--~~l~dADiVIit~g~   76 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKE-LGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY--EDIAGSDVVVITAGI   76 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCC-CcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH--HHhCCCCEEEEecCC
Confidence            568897 999999999998888 5 999999864321111111111     1112322 2332  345689999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  ....+....+..|......+++.+.+...  .+|.+|-
T Consensus        77 p~--~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          77 PR--KPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             CC--CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            43  22344455667888888888888887764  4566653

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.07  E-value=0.047  Score=51.28  Aligned_cols=69  Identities=23%  Similarity=0.337  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------~~d~vi~  103 (346)
                      ..++|+|+|+ |.+|+.+++.|.+.| +.|++++++.    +....... ..++..+.+|.++...+      ++|.||-
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~-~~v~vid~~~----~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~  303 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEG-YSVKLIERDP----ERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIA  303 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCH----HHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEE
Confidence            3579999996 999999999999999 9999998743    22222211 13577889998876433      6888885


Q ss_pred             cc
Q 019060          104 LA  105 (346)
Q Consensus       104 ~a  105 (346)
                      +.
T Consensus       304 ~~  305 (453)
T PRK09496        304 LT  305 (453)
T ss_pred             CC
Confidence            44

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.04  E-value=0.058  Score=46.67  Aligned_cols=93  Identities=19%  Similarity=0.139  Sum_probs=53.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      +|||.|+|. |.||+.+++.|.+....++.++.... ............ ++. +..|+.+. ..++|+|+-+++..   
T Consensus         1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~-~~~~~~~~~~~~-~~~-~~~d~~~l-~~~~DvVve~t~~~---   72 (265)
T PRK13303          1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPE-HSIDAVRRALGE-AVR-VVSSVDAL-PQRPDLVVECAGHA---   72 (265)
T ss_pred             CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcC-CCHHHHhhhhcc-CCe-eeCCHHHh-ccCCCEEEECCCHH---
Confidence            379999997 99999999999887435665554211 111111111111 222 22333333 35699999988421   


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                     .....+..+.+.|++++..|.
T Consensus        73 ---------------~~~e~~~~aL~aGk~Vvi~s~   93 (265)
T PRK13303         73 ---------------ALKEHVVPILKAGIDCAVISV   93 (265)
T ss_pred             ---------------HHHHHHHHHHHcCCCEEEeCh
Confidence                           223455566667777765443

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.03  E-value=0.079  Score=46.73  Aligned_cols=100  Identities=18%  Similarity=0.308  Sum_probs=63.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-----------------------hcCCCCeeEEeccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-----------------------WIGHPRFELIRHDV   90 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-----------------------~~~~~~~~~~~~d~   90 (346)
                      +|||.| .|.+|.++++.|...|...+++++...-... .+.+                       +...-.+..+..++
T Consensus         1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~s-NLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLS-NLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANI   78 (312)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchh-hcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccC
Confidence            589999 5999999999999999778888875421111 1111                       11112344455555


Q ss_pred             CCcc-----cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           91 TEPL-----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        91 ~~~~-----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .+..     ..++|+||.+.-                 |...-..+-+.|+..++.+|..++.+.+|
T Consensus        79 ~~~~~~~~f~~~~DvVv~a~D-----------------n~~ar~~in~~c~~~~ip~I~~gt~G~~G  128 (312)
T cd01489          79 KDPDFNVEFFKQFDLVFNALD-----------------NLAARRHVNKMCLAADVPLIESGTTGFLG  128 (312)
T ss_pred             CCccchHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHCCCCEEEEecCccee
Confidence            5421     236999997651                 22233446677888888888887766555

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.96  E-value=0.041  Score=43.46  Aligned_cols=66  Identities=17%  Similarity=0.231  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      .+++|+|.| .|-+|...++.|++.| +.|+++..   ...+.+..   ...+.+....+......+.|.||-+
T Consensus        12 ~~~~vlVvG-GG~va~rka~~Ll~~g-a~V~VIsp---~~~~~l~~---l~~i~~~~~~~~~~dl~~a~lViaa   77 (157)
T PRK06719         12 HNKVVVIIG-GGKIAYRKASGLKDTG-AFVTVVSP---EICKEMKE---LPYITWKQKTFSNDDIKDAHLIYAA   77 (157)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEcC---ccCHHHHh---ccCcEEEecccChhcCCCceEEEEC
Confidence            478999999 7999999999999999 99998853   22222222   1245555555555555678888754

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=95.94  E-value=0.05  Score=47.51  Aligned_cols=33  Identities=30%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+| .|.+|..++..|.+.| ++|++++|+.
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g-~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLG-HTVYGVSRRE   33 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            6899998 8999999999999999 9999999853

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.93  E-value=0.015  Score=54.20  Aligned_cols=34  Identities=35%  Similarity=0.443  Sum_probs=31.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|+|+||+|.+|+.+++.|.+.| ++|++++|+.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G-~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKG-FEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCC-CEEEEEECCh
Confidence            689999999999999999999999 9999999854

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.91  E-value=0.096  Score=46.14  Aligned_cols=107  Identities=14%  Similarity=0.114  Sum_probs=72.1

Q ss_pred             EEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           37 VTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        37 ItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      |+| .|.||..++-.|+..+. .++.+++++..........+..     ....++...|.  .+..+.|+||-+||... 
T Consensus         1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~--~~~~daDivVitag~~r-   76 (299)
T TIGR01771         1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDY--SDCKDADLVVITAGAPQ-   76 (299)
T ss_pred             CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCH--HHHCCCCEEEECCCCCC-
Confidence            356 59999999999998875 4788998865433333222221     11233332222  34557999999998642 


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                       ....+....+..|..-.+.+.+.+.+.+.  .+|.+|-.
T Consensus        77 -k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP  115 (299)
T TIGR01771        77 -KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNP  115 (299)
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence             23456678889999999999999988764  67777753

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.90  E-value=0.01  Score=47.26  Aligned_cols=65  Identities=22%  Similarity=0.185  Sum_probs=40.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      +|+|.++| .|-+|+.+++.|+++| ++|++.+|+.    +...++... ++.  .++-......++|+|+-+.
T Consensus         1 m~~Ig~IG-lG~mG~~~a~~L~~~g-~~v~~~d~~~----~~~~~~~~~-g~~--~~~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIG-LGNMGSAMARNLAKAG-YEVTVYDRSP----EKAEALAEA-GAE--VADSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTT-TEEEEEESSH----HHHHHHHHT-TEE--EESSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEc-hHHHHHHHHHHHHhcC-CeEEeeccch----hhhhhhHHh-hhh--hhhhhhhHhhcccceEeec
Confidence            47999999 7999999999999999 9999999853    333333222 222  2222222223579998765

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=95.85  E-value=0.13  Score=43.96  Aligned_cols=94  Identities=14%  Similarity=0.147  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      |.+||.|+| .|.||+.++++|.+.+.  .++..+.+..+...   ..+...  .+ +..|+.+....++|.|+=+|+. 
T Consensus         1 ~~~rvgiIG-~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~---~~~~~~--~~-~~~~l~~ll~~~~DlVVE~A~~-   72 (267)
T PRK13301          1 MTHRIAFIG-LGAIASDVAAGLLADAAQPCQLAALTRNAADLP---PALAGR--VA-LLDGLPGLLAWRPDLVVEAAGQ-   72 (267)
T ss_pred             CceEEEEEC-ccHHHHHHHHHHhcCCCCceEEEEEecCCHHHH---HHhhcc--Cc-ccCCHHHHhhcCCCEEEECCCH-
Confidence            457999998 99999999999876532  56666555332121   122111  12 2223444334579999999953 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                       .........+.+.|+.++.+|..+
T Consensus        73 -----------------~av~e~~~~iL~~g~dlvv~SvGA   96 (267)
T PRK13301         73 -----------------QAIAEHAEGCLTAGLDMIICSAGA   96 (267)
T ss_pred             -----------------HHHHHHHHHHHhcCCCEEEEChhH
Confidence                             234445555566676776666443

>cd05295 MDH_like Malate dehydrogenase-like

Probab=95.83  E-value=0.11  Score=48.19  Aligned_cols=162  Identities=9%  Similarity=0.018  Sum_probs=94.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc---CC-C--eEEEEeCC--CCCCcchhhhhcC-----CCCeeEEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN---EK-N--EVIVVDNY--FTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~---g~-~--~V~~~~r~--~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d   99 (346)
                      -+|+||||+|.||.+|+-.+..-   |. -  .+++++..  ..........+..     ...+.....|  ..++.++|
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~--~ea~~daD  201 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDL--DVAFKDAH  201 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECC--HHHhCCCC
Confidence            47999999999999999988752   21 2  24455552  1111111111111     1123333222  24556899


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccc------cCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEV------YGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v------~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +||-+||..  .....+....+..|..-...+..+..+.+   ++++.+.|--+      .-...            ...
T Consensus       202 vvIitag~p--rk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~a------------pgi  267 (452)
T cd05295         202 VIVLLDDFL--IKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYA------------PSI  267 (452)
T ss_pred             EEEECCCCC--CCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHc------------CCC
Confidence            999999853  23345677888999999999998887776   36776665211      10000            011


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      .+....|.+....-++....++..+++..-|+-..|+|.+
T Consensus       268 P~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeH  307 (452)
T cd05295         268 PRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNI  307 (452)
T ss_pred             CHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEcc
Confidence            1223344444454444445566667777777777788864

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=95.80  E-value=0.013  Score=53.34  Aligned_cols=35  Identities=17%  Similarity=0.341  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..++|.|+||.|.+|+.+++.|.+.| +.|++++|.
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G-~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSG-YQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCC-CeEEEeCCC
Confidence            45899999999999999999999999 999999874

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.79  E-value=0.077  Score=46.48  Aligned_cols=34  Identities=24%  Similarity=0.355  Sum_probs=30.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      .+|.|+| .|.+|..++..|+..| ++|++++++..
T Consensus         6 ~~V~ViG-aG~mG~~iA~~~a~~G-~~V~l~d~~~~   39 (286)
T PRK07819          6 QRVGVVG-AGQMGAGIAEVCARAG-VDVLVFETTEE   39 (286)
T ss_pred             cEEEEEc-ccHHHHHHHHHHHhCC-CEEEEEECCHH
Confidence            4899998 5999999999999999 99999998653

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.78  E-value=0.14  Score=43.52  Aligned_cols=102  Identities=17%  Similarity=0.205  Sum_probs=61.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-------------------cC--CCC--eeEEec
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------------------IG--HPR--FELIRH   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~~--~~~~~~   88 (346)
                      +.+|+|.| .|.+|+.+++.|.+.|..++++++...-... .+.++                   +.  .+.  ++.+..
T Consensus        24 ~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~s-NL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~  101 (240)
T TIGR02355        24 ASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLS-NLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA  101 (240)
T ss_pred             CCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCccccc-CcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            46899998 7889999999999999778888876432111 11110                   00  122  333333


Q ss_pred             ccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        89 d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .+...    ...++|+||.+..                 |...-..+-++|.+.++.+|+-++...+|
T Consensus       102 ~i~~~~~~~~~~~~DlVvd~~D-----------------~~~~r~~ln~~~~~~~ip~v~~~~~g~~G  152 (240)
T TIGR02355       102 KLDDAELAALIAEHDIVVDCTD-----------------NVEVRNQLNRQCFAAKVPLVSGAAIRMEG  152 (240)
T ss_pred             cCCHHHHHHHhhcCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEEecccEe
Confidence            33221    1236899988761                 11223345678888888898876654444

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=95.75  E-value=0.071  Score=49.36  Aligned_cols=34  Identities=29%  Similarity=0.329  Sum_probs=31.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|+|.|+| .|++|..++..|.+.| |+|++++++.
T Consensus         3 ~~kI~VIG-lG~~G~~~A~~La~~G-~~V~~~D~~~   36 (415)
T PRK11064          3 FETISVIG-LGYIGLPTAAAFASRQ-KQVIGVDINQ   36 (415)
T ss_pred             ccEEEEEC-cchhhHHHHHHHHhCC-CEEEEEeCCH
Confidence            47999998 8999999999999999 9999999854

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.71  E-value=0.17  Score=42.68  Aligned_cols=34  Identities=24%  Similarity=0.361  Sum_probs=29.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      +.+|+|.| .|.+|+++++.|.+.|..++++++..
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            56899998 78899999999999996688888753

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []

Probab=95.68  E-value=0.022  Score=50.74  Aligned_cols=98  Identities=12%  Similarity=0.024  Sum_probs=62.3

Q ss_pred             CCCCEEEEcccCCCcccc-ccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           96 IEVDQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      .++..+|++-|..+.... ...+  .-.+.......++++..    +.+. ++|.++|...                 ..
T Consensus       202 ~~i~t~is~LGsts~~a~~s~~~--~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~-----------------~~  262 (410)
T PF08732_consen  202 DDIKTMISTLGSTSAQAKSSKAA--RHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNN-----------------NA  262 (410)
T ss_pred             hhhhhheecCCCChhhccccccc--hhhccccccHHHHHHhhhhhccCCCceEEEEEecCc-----------------ch
Confidence            368888988876553221 1111  11333444455555554    4444 8999988653                 23


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCC
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN  212 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~  212 (346)
                      .....+|...|...|..+.......--..+|+|||.+.|.+..
T Consensus       263 ~s~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~  305 (410)
T PF08732_consen  263 ISSMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS  305 (410)
T ss_pred             hhhhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence            3445679999999999887654322236899999999998755

It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.68  E-value=0.18  Score=36.65  Aligned_cols=87  Identities=20%  Similarity=0.232  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      .+++|||+|| |-+|..=++.|++.| .+|+++....    +..+     ..+++....+. ....+++.||-+.+    
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~g-A~v~vis~~~----~~~~-----~~i~~~~~~~~-~~l~~~~lV~~at~----   69 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAG-AKVTVISPEI----EFSE-----GLIQLIRREFE-EDLDGADLVFAATD----   69 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCT-BEEEEEESSE----HHHH-----TSCEEEESS-G-GGCTTESEEEE-SS----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEECCch----hhhh-----hHHHHHhhhHH-HHHhhheEEEecCC----
Confidence            4789999995 999999999999999 9999998642    1111     34555555553 44556888874331    


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                   +-.....+.+.|++.+ .++.++.
T Consensus        70 -------------d~~~n~~i~~~a~~~~-i~vn~~D   92 (103)
T PF13241_consen   70 -------------DPELNEAIYADARARG-ILVNVVD   92 (103)
T ss_dssp             --------------HHHHHHHHHHHHHTT-SEEEETT
T ss_pred             -------------CHHHHHHHHHHHhhCC-EEEEECC
Confidence                         1112345777787766 3444443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.66  E-value=0.031  Score=48.47  Aligned_cols=75  Identities=17%  Similarity=0.187  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-CCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-EVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~d~vi~~a~~  107 (346)
                      .+++++|.| +|..++.++..|++.|..+|+++.|+..+ .+.+.+.+..........+..+.... ..|+|||+-..
T Consensus       125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~r-a~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~  200 (283)
T COG0169         125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRER-AEELADLFGELGAAVEAAALADLEGLEEADLLINATPV  200 (283)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhhhcccccccccccccccccccCEEEECCCC
Confidence            468999999 67789999999999996689999996533 33333333322211112222222223 58999998754

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.64  E-value=0.072  Score=46.54  Aligned_cols=96  Identities=14%  Similarity=0.207  Sum_probs=58.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc-hhhhhcCCCCeeEEecccC----CcccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-NLRKWIGHPRFELIRHDVT----EPLLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~d~~----~~~~~~~d~vi~~a~  106 (346)
                      +++|.|+| +|.||..++..+++....++.++....+.... ...+.   .++.....|+.    +..+.++|+||.+.+
T Consensus         4 klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~---~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~   79 (302)
T PRK08300          4 KLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARR---LGVATSAEGIDGLLAMPEFDDIDIVFDATS   79 (302)
T ss_pred             CCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHH---cCCCcccCCHHHHHhCcCCCCCCEEEECCC
Confidence            57999999 99999999999987654677665432222111 11121   13333222222    223356999998763


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      .                  .........+.+.|+++|-.|+.+
T Consensus        80 a------------------~~H~e~a~~a~eaGk~VID~sPA~  104 (302)
T PRK08300         80 A------------------GAHVRHAAKLREAGIRAIDLTPAA  104 (302)
T ss_pred             H------------------HHHHHHHHHHHHcCCeEEECCccc
Confidence            2                  123456667778888888777776

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.59  E-value=0.069  Score=50.44  Aligned_cols=71  Identities=24%  Similarity=0.199  Sum_probs=47.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +++|+|.| .|..|.++++.|.+.| +.|.+.++.....    .+.....++++..+.-......++|.||...|..
T Consensus        15 ~~~v~v~G-~G~sG~a~a~~L~~~G-~~V~~~D~~~~~~----~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~   85 (473)
T PRK00141         15 SGRVLVAG-AGVSGRGIAAMLSELG-CDVVVADDNETAR----HKLIEVTGVADISTAEASDQLDSFSLVVTSPGWR   85 (473)
T ss_pred             CCeEEEEc-cCHHHHHHHHHHHHCC-CEEEEECCChHHH----HHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCC
Confidence            56899999 8889999999999999 8999998753211    1222223566655432222233689999877653

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.037  Score=48.14  Aligned_cols=35  Identities=14%  Similarity=0.322  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      -.+++|+|+|++|.+|+.++..|++.| ..|++..|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~g-atVtv~~~  191 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNAN-ATVTICHS  191 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCC-CEEEEEeC
Confidence            457899999999999999999999999 79988876

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=95.51  E-value=0.055  Score=37.22  Aligned_cols=33  Identities=36%  Similarity=0.610  Sum_probs=29.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      +|+|.| +|++|..++..|.+.| .+|+++.|...
T Consensus         1 ~vvViG-gG~ig~E~A~~l~~~g-~~vtli~~~~~   33 (80)
T PF00070_consen    1 RVVVIG-GGFIGIELAEALAELG-KEVTLIERSDR   33 (80)
T ss_dssp             EEEEES-SSHHHHHHHHHHHHTT-SEEEEEESSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHhC-cEEEEEeccch
Confidence            577887 8999999999999999 99999998653

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.49  E-value=0.13  Score=46.59  Aligned_cols=103  Identities=19%  Similarity=0.139  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-------------------c--CCCC--eeEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------------------I--GHPR--FELIR   87 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~--~~~~--~~~~~   87 (346)
                      .+.+|+|.| .|.+|+++++.|...|..++++++...-... .+.++                   +  -.+.  ++.+.
T Consensus        27 ~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~s-NL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         27 FDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLS-NLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             hCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEccc-ccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            457999999 5889999999999999778888876431111 11110                   0  0233  33344


Q ss_pred             cccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        88 ~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..++..    ...++|+||.+..                 |...-..+-++|.+.++.+|+.++...+|
T Consensus       105 ~~i~~~~~~~~~~~~DvVvd~~d-----------------~~~~r~~~n~~c~~~~ip~v~~~~~g~~g  156 (355)
T PRK05597        105 RRLTWSNALDELRDADVILDGSD-----------------NFDTRHLASWAAARLGIPHVWASILGFDA  156 (355)
T ss_pred             eecCHHHHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEecCeE
Confidence            444432    1237999998762                 11112235578888888888877654433

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.49  E-value=0.2  Score=41.71  Aligned_cols=35  Identities=23%  Similarity=0.337  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ...+|+|.| .|.+|+.+++.|.+.|..++++++..
T Consensus        27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            356899999 68999999999999996678888875

>PRK08328 hypothetical protein; Provisional

Probab=95.44  E-value=0.074  Score=44.98  Aligned_cols=35  Identities=20%  Similarity=0.380  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+.+|+|.| .|.+|+++++.|...|..++++++..
T Consensus        26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            356899998 78899999999999997788888753

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.42  E-value=0.08  Score=48.38  Aligned_cols=103  Identities=21%  Similarity=0.247  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------------------CcchhhhhcC--CCCe--eEEec
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------------SKDNLRKWIG--HPRF--ELIRH   88 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------------------~~~~~~~~~~--~~~~--~~~~~   88 (346)
                      ...+|+|.| .|.+|+++++.|...|..+++++++..-.                  +.+...+.+.  .+.+  ..+..
T Consensus       134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  212 (376)
T PRK08762        134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQE  212 (376)
T ss_pred             hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEec
Confidence            457899997 68899999999999996688888875210                  1111111110  1223  23333


Q ss_pred             ccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060           89 DVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus        89 d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      .+...    ...++|+||++..         +        ...-..+-++|++.++.+|+.+....+
T Consensus       213 ~~~~~~~~~~~~~~D~Vv~~~d---------~--------~~~r~~ln~~~~~~~ip~i~~~~~g~~  262 (376)
T PRK08762        213 RVTSDNVEALLQDVDVVVDGAD---------N--------FPTRYLLNDACVKLGKPLVYGAVFRFE  262 (376)
T ss_pred             cCChHHHHHHHhCCCEEEECCC---------C--------HHHHHHHHHHHHHcCCCEEEEEeccCE
Confidence            33221    1236999998762         1        111223567889999899988765443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.41  E-value=0.42  Score=45.38  Aligned_cols=159  Identities=17%  Similarity=0.247  Sum_probs=90.4

Q ss_pred             CCEEEEEcCc-hhHHHHHHHHHHhcCCCeEEEEeCCC-CCCcchhhhhcC---CCC--eeEEecccCCccc---------
Q 019060           32 NMRILVTGGA-GFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIG---HPR--FELIRHDVTEPLL---------   95 (346)
Q Consensus        32 ~~~ilItG~t-G~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~---~~~--~~~~~~d~~~~~~---------   95 (346)
                      .+-.|||||+ |-||..+++.|++-| -+|++++.+. ....+-...++.   ..+  +-++..+..+...         
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gG-AtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGG-ATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCC-cEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            4678999876 899999999999999 8888776432 222222222221   122  2233444333211         


Q ss_pred             -----------------CCCCEEEEcccCCCccc-cccChHHHH--HHHHHHHHHHHHHHHHcC----C----eEEEEec
Q 019060           96 -----------------IEVDQIYHLACPASPIF-YKYNPVKTI--KTNVIGTLNMLGLAKRVG----A----RILLTST  147 (346)
Q Consensus        96 -----------------~~~d~vi~~a~~~~~~~-~~~~~~~~~--~~n~~~~~~l~~~~~~~~----~----r~i~~SS  147 (346)
                                       ..+|.+|-+|++..... ....+...+  .+=+....+++..+++.+    +    ++|.-.|
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS  554 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS  554 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence                             13888998887643222 222333333  333445556666665543    2    4665555


Q ss_pred             cc--ccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhC----CceEEEEeccccCCC
Q 019060          148 SE--VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG----IEIRIARIFNTYGPR  210 (346)
Q Consensus       148 ~~--v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----~~~~ivR~~~i~G~~  210 (346)
                      ..  .||                   ....||.+|...|.++..++.+++    +.++--+.|++=|.+
T Consensus       555 PNrG~FG-------------------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG  604 (866)
T COG4982         555 PNRGMFG-------------------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG  604 (866)
T ss_pred             CCCCccC-------------------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence            42  232                   235699999999999998877653    223333445544443

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.38  E-value=0.24  Score=41.81  Aligned_cols=100  Identities=19%  Similarity=0.197  Sum_probs=61.8

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-----------------------hcCCCCeeEEeccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-----------------------WIGHPRFELIRHDV   90 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-----------------------~~~~~~~~~~~~d~   90 (346)
                      +|||.| .|.+|.++++.|...|..++++++...-... .+.+                       ....-++..+..++
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~s-NLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i   78 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVS-NLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKV   78 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcch-hhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            588888 8899999999999999668888876421111 1111                       01111344455555


Q ss_pred             CCcc------cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           91 TEPL------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        91 ~~~~------~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .+..      ..++|+||.+..                 |...-..+-+.|...++.+|..++.+-+|
T Consensus        79 ~~~~~~~~~f~~~~DvVi~a~D-----------------n~~aR~~ln~~c~~~~iplI~~g~~G~~G  129 (234)
T cd01484          79 GPEQDFNDTFFEQFHIIVNALD-----------------NIIARRYVNGMLIFLIVPLIESGTEGFKG  129 (234)
T ss_pred             ChhhhchHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEcccCCce
Confidence            3211      236899998651                 23334446677888888888877765554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=95.38  E-value=0.056  Score=46.94  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +.|+|+|.| .|.||+.+++.|.+.| +.|.++++..
T Consensus         2 ~~~~v~IvG-~GliG~s~a~~l~~~g-~~v~i~g~d~   36 (279)
T COG0287           2 ASMKVGIVG-LGLMGGSLARALKEAG-LVVRIIGRDR   36 (279)
T ss_pred             CCcEEEEEC-CchHHHHHHHHHHHcC-CeEEEEeecC
Confidence            356777777 9999999999999999 9988887754

>PRK06444 prephenate dehydrogenase; Provisional

Probab=95.36  E-value=0.023  Score=46.55  Aligned_cols=28  Identities=29%  Similarity=0.347  Sum_probs=26.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI   61 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~   61 (346)
                      |+|.|+||+|.+|+.+++.|.+.| +.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g-~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNG-LGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCC-CEEE
Confidence            689999999999999999999999 8885

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.34  E-value=0.21  Score=43.03  Aligned_cols=35  Identities=23%  Similarity=0.358  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+.+|+|.| .|.+|+++++.|.+.|..++++++..
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356899998 78999999999999997688888753

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.34  E-value=0.013  Score=44.33  Aligned_cols=32  Identities=28%  Similarity=0.465  Sum_probs=26.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      ..++|-|+|+ |-+|.+|++.|.+.| |.|..+.
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag-~~v~~v~   40 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAG-HEVVGVY   40 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTT-SEEEEES
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCC-CeEEEEE
Confidence            4689999995 999999999999999 9988774

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=95.32  E-value=0.064  Score=49.98  Aligned_cols=72  Identities=17%  Similarity=0.174  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-
Q 019060           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-   93 (346)
Q Consensus        31 ~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-   93 (346)
                      .+++||||+|                ||.+|..|++.+..+| .+|+.+.-...-.        ...+++.+..+.... 
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~G-A~VtlI~Gp~~~~--------~p~~v~~i~V~ta~eM  325 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAG-AEVTLISGPVDLA--------DPQGVKVIHVESARQM  325 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCC-CcEEEEeCCcCCC--------CCCCceEEEecCHHHH
Confidence            5789999987                7999999999999999 9999886432110        113456555543332 


Q ss_pred             -----ccCCCCEEEEcccCCCcc
Q 019060           94 -----LLIEVDQIYHLACPASPI  111 (346)
Q Consensus        94 -----~~~~~d~vi~~a~~~~~~  111 (346)
                           .....|++|++|+..+..
T Consensus       326 ~~av~~~~~~Di~I~aAAVaDyr  348 (475)
T PRK13982        326 LAAVEAALPADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHhhCCCCEEEEecccccee
Confidence                 122479999999976643

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=95.30  E-value=0.24  Score=36.82  Aligned_cols=84  Identities=17%  Similarity=0.159  Sum_probs=49.8

Q ss_pred             CEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      ++|+|+|+|   +-.|..+.+.|.+.| ++|+.+.-..    ...      .+.+ ...++.+ .-..+|.++.+.    
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G-~~v~~Vnp~~----~~i------~G~~-~y~sl~e-~p~~iDlavv~~----   63 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAG-YEVYPVNPKG----GEI------LGIK-CYPSLAE-IPEPIDLAVVCV----   63 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT--EEEEESTTC----SEE------TTEE--BSSGGG-CSST-SEEEE-S----
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCC-CEEEEECCCc----eEE------CcEE-eeccccC-CCCCCCEEEEEc----
Confidence            579999998   779999999999999 9999986421    111      1122 2233443 234689988765    


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST  147 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS  147 (346)
                                    +-..+..+++.|.+.|+ .+++.++
T Consensus        64 --------------~~~~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   64 --------------PPDKVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             ---------------HHHHHHHHHHHHHHT-SEEEE-TT
T ss_pred             --------------CHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                          23346678888888888 4665555

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=95.27  E-value=0.027  Score=50.74  Aligned_cols=34  Identities=32%  Similarity=0.396  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|+|.|+| .|.+|..++..|.++| ++|++++|.
T Consensus         1 ~~mkI~IiG-~G~mG~~~A~~L~~~G-~~V~~~~r~   34 (341)
T PRK08229          1 MMARICVLG-AGSIGCYLGGRLAAAG-ADVTLIGRA   34 (341)
T ss_pred             CCceEEEEC-CCHHHHHHHHHHHhcC-CcEEEEecH
Confidence            468999998 9999999999999999 999999984

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.27  E-value=0.054  Score=40.22  Aligned_cols=64  Identities=25%  Similarity=0.461  Sum_probs=45.7

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      |+|+| .|-+|+.+++.|.+.+ ..|++++++.    +...... ..++.++.+|.++....      +++.|+-+.
T Consensus         1 vvI~G-~g~~~~~i~~~L~~~~-~~vvvid~d~----~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIG-YGRIGREIAEQLKEGG-IDVVVIDRDP----ERVEELR-EEGVEVIYGDATDPEVLERAGIEKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTT-SEEEEEESSH----HHHHHHH-HTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred             eEEEc-CCHHHHHHHHHHHhCC-CEEEEEECCc----HHHHHHH-hcccccccccchhhhHHhhcCccccCEEEEcc
Confidence            57778 5789999999999966 7999998743    2222222 23588999999987543      688888765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=95.27  E-value=0.16  Score=43.22  Aligned_cols=114  Identities=19%  Similarity=0.077  Sum_probs=65.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC-CCCcchhhhhcCCCCeeEEe-cccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF-TGSKDNLRKWIGHPRFELIR-HDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +-||.|.||.|.||+.|.-.|..+.. .+...++-.. +.-...+...-....+.-+. .|-......+.|+|+--||..
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGVP  107 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGVP  107 (345)
T ss_pred             cceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCCC
Confidence            46999999999999999986654431 1223333211 11000000000001111111 111112334799999988753


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                        .......+..+++|..-...+..++.+...  ++.++|-
T Consensus       108 --RKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN  146 (345)
T KOG1494|consen  108 --RKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN  146 (345)
T ss_pred             --CCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence              344567788999999999999988887653  5666664

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=95.27  E-value=0.026  Score=45.89  Aligned_cols=32  Identities=41%  Similarity=0.584  Sum_probs=26.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|.|+| .||+|..++..|.+.| |+|++++.+
T Consensus         1 M~I~ViG-lGyvGl~~A~~lA~~G-~~V~g~D~~   32 (185)
T PF03721_consen    1 MKIAVIG-LGYVGLPLAAALAEKG-HQVIGVDID   32 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTT-SEEEEE-S-
T ss_pred             CEEEEEC-CCcchHHHHHHHHhCC-CEEEEEeCC
Confidence            7999997 9999999999999999 999999874

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.27  E-value=0.026  Score=50.71  Aligned_cols=76  Identities=16%  Similarity=0.144  Sum_probs=45.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc----cCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL----LIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----~~~~d~vi~~a  105 (346)
                      ..++.|||.||+|.+|+..++-+...+ ...++..++. +..+..+++-...-+++-..|+.+..    ..++|+|++++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~-~~~v~t~~s~-e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~v  233 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAG-AIKVVTACSK-EKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCV  233 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcC-CcEEEEEccc-chHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECC
Confidence            356899999999999999999988887 5544444432 22222222222111222222222211    23699999999


Q ss_pred             cC
Q 019060          106 CP  107 (346)
Q Consensus       106 ~~  107 (346)
                      |.
T Consensus       234 g~  235 (347)
T KOG1198|consen  234 GG  235 (347)
T ss_pred             CC
Confidence            75

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.05  Score=47.46  Aligned_cols=37  Identities=19%  Similarity=0.307  Sum_probs=33.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -.+++|.|+|.+|.+|+.++..|+++| +.|++..|..
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~g-atVtv~~~~t  193 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAH-CSVTVVHSRS  193 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCC-CEEEEECCCC
Confidence            358999999999999999999999999 9999997643

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.25  E-value=0.052  Score=47.46  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ..++|+|+| +|..|++++..|.+.|..+|++++|+..+. +.+.+.+.  .+.......+-......++|+||++.
T Consensus       126 ~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka-~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaT  200 (284)
T PRK12549        126 SLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARA-AALADELNARFPAARATAGSDLAAALAAADGLVHAT  200 (284)
T ss_pred             cCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECC
Confidence            357899999 577999999999999955899999965322 22322221  11222222221112234689999984

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=95.25  E-value=0.14  Score=45.57  Aligned_cols=36  Identities=28%  Similarity=0.308  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.++||+||+|.+|..+++.+...| ..|+++.++.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g-~~v~~~~~~~  197 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALG-ARVIAVTRSP  197 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CeEEEEeCCH
Confidence            46799999999999999999999999 8888887643

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.25  E-value=0.52  Score=44.27  Aligned_cols=124  Identities=12%  Similarity=0.047  Sum_probs=71.0

Q ss_pred             CEEE----EEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           33 MRIL----VTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~il----ItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .++|    |+||+|.+|..+++.|...| .+|++..+.....                  +..  ...+++.+++-+.  
T Consensus        35 ~~~~~~~~l~~~~~g~~~~~~~~~~~~g-~~v~~~~~~~~~~------------------~~~--~~~~~~~~~~d~~--   91 (450)
T PRK08261         35 QPLLDGPVLVGGAGRLAEALAALLAGLG-YDVVANNDGGLTW------------------AAG--WGDRFGALVFDAT--   91 (450)
T ss_pred             CCCCCCceEEccCchhHHHHHHHHhhCC-CeeeecCcccccc------------------ccC--cCCcccEEEEECC--
Confidence            3566    78889999999999999999 9998875432100                  000  0123554444331  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                          ....++..... .......+..+.. +.+||+++|.....                   ....|+.+|...+.+.+
T Consensus        92 ----~~~~~~~l~~~-~~~~~~~l~~l~~-~griv~i~s~~~~~-------------------~~~~~~~akaal~gl~r  146 (450)
T PRK08261         92 ----GITDPADLKAL-YEFFHPVLRSLAP-CGRVVVLGRPPEAA-------------------ADPAAAAAQRALEGFTR  146 (450)
T ss_pred             ----CCCCHHHHHHH-HHHHHHHHHhccC-CCEEEEEccccccC-------------------CchHHHHHHHHHHHHHH
Confidence                11122221111 1222223333322 33999999875431                   11248999999999999


Q ss_pred             HHHHHh--CCceEEEEec
Q 019060          189 DYHRQH--GIEIRIARIF  204 (346)
Q Consensus       189 ~~~~~~--~~~~~ivR~~  204 (346)
                      .++.+.  ++.+..+.++
T Consensus       147 sla~E~~~gi~v~~i~~~  164 (450)
T PRK08261        147 SLGKELRRGATAQLVYVA  164 (450)
T ss_pred             HHHHHhhcCCEEEEEecC
Confidence            887764  4555556553

>PRK08223 hypothetical protein; Validated

Probab=95.24  E-value=0.23  Score=43.13  Aligned_cols=102  Identities=14%  Similarity=0.079  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-------------------C--CC--CeeEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-------------------G--HP--RFELIR   87 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~--~~--~~~~~~   87 (346)
                      .+.+|+|.| .|.+|+.+++.|...|..++++++...-.. ..+.++.                   .  .+  .++.+.
T Consensus        26 ~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~-SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         26 RNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFEL-RNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcch-hccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            356899998 788999999999999977888887542111 1111110                   0  12  333444


Q ss_pred             cccCCcc----cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060           88 HDVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus        88 ~d~~~~~----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      ..++...    ..++|+||.+.-.         +      +...-..+-++|++.++.+|+.|...
T Consensus       104 ~~l~~~n~~~ll~~~DlVvD~~D~---------~------~~~~r~~ln~~c~~~~iP~V~~~~~g  154 (287)
T PRK08223        104 EGIGKENADAFLDGVDVYVDGLDF---------F------EFDARRLVFAACQQRGIPALTAAPLG  154 (287)
T ss_pred             cccCccCHHHHHhCCCEEEECCCC---------C------cHHHHHHHHHHHHHcCCCEEEEeccC
Confidence            4444322    2368999865411         0      11123345678999998888876543

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.20  E-value=0.1  Score=45.14  Aligned_cols=66  Identities=17%  Similarity=0.268  Sum_probs=38.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcC-CCeEE-EEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENE-KNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g-~~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|.|+| .|.+|+.+++.|.+.+ ..++. +++|+. .   ....+....+.. ...|+.+.. .++|+|+.++
T Consensus         2 mrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~-~---~a~~~a~~~~~~-~~~~~~ell-~~~DvVvi~a   69 (265)
T PRK13304          2 LKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNL-E---KAENLASKTGAK-ACLSIDELV-EDVDLVVECA   69 (265)
T ss_pred             CEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCH-H---HHHHHHHhcCCe-eECCHHHHh-cCCCEEEEcC
Confidence            7999999 6999999999998763 25554 445432 1   111211111222 122332222 4699999987

>TIGR01408 Ube1 ubiquitin-activating enzyme E1

Probab=95.18  E-value=0.092  Score=53.78  Aligned_cols=103  Identities=12%  Similarity=0.108  Sum_probs=65.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc----------------------hhhhhcCCCCeeEEecc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRHD   89 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~d   89 (346)
                      ..+|||.|. |.+|.++++.|...|...+++++...-....                      .+.++-..-.+..+..+
T Consensus        24 ~s~VLIiG~-gGLG~EiaKnL~laGVg~iti~D~d~v~~sdL~rQf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~  102 (1008)
T TIGR01408        24 KSNVLISGM-GGLGLEIAKNLVLAGVKSVTLHDTEKCQAWDLSSNFFLSEDDVGRNRAEAVVKKLAELNPYVHVSSSSVP  102 (1008)
T ss_pred             hCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCeecHhhCCCceecchHHcCchHHHHHHHHHHHHCCCceEEEeccc
Confidence            458999995 6699999999999997788888753211000                      01111111234444445


Q ss_pred             cCCcccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC--CeEEEEecccccC
Q 019060           90 VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARILLTSTSEVYG  152 (346)
Q Consensus        90 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~r~i~~SS~~v~~  152 (346)
                      +...-..++|+||.+..                 +......+-++|++.+  +.||+.++.+.||
T Consensus       103 l~~e~l~~fdvVV~t~~-----------------~~~~~~~in~~cr~~~~~I~fI~~~~~G~~G  150 (1008)
T TIGR01408       103 FNEEFLDKFQCVVLTEM-----------------SLPLQKEINDFCHSQCPPIAFISADVRGLFG  150 (1008)
T ss_pred             CCHHHHcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCeEEEEEeecceEE
Confidence            54434457999998641                 1223345778999998  6799888877665

This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.17  E-value=0.05  Score=47.24  Aligned_cols=45  Identities=13%  Similarity=0.177  Sum_probs=37.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW   77 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~   77 (346)
                      .+++|.|+|+.| +|+--++...+-| ++|+++++...++++....+
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG-~rV~vis~~~~kkeea~~~L  225 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMG-MRVTVISTSSKKKEEAIKSL  225 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhC-cEEEEEeCCchhHHHHHHhc
Confidence            589999999999 9999999888899 99999999765555555443

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=95.14  E-value=0.045  Score=47.82  Aligned_cols=75  Identities=13%  Similarity=0.028  Sum_probs=45.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEec-ccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRH-DVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+++++|+| +|..|+.++..|.+.|..+|++++|+..+ .+.+.+.+.. ..+..+.. +-......++|+||++...
T Consensus       124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~k-a~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~  200 (282)
T TIGR01809       124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDK-LSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPA  200 (282)
T ss_pred             CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCC
Confidence            367899998 58899999999999995589999996422 2223222211 11111110 1001122468999998744

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.13  E-value=0.19  Score=46.17  Aligned_cols=103  Identities=23%  Similarity=0.211  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-------------------cC--CCC--eeEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------------------IG--HPR--FELIR   87 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~~--~~~~~   87 (346)
                      ...+|||+| .|.+|+++++.|...|...+++++...-... .+.++                   +.  .+.  +..+.
T Consensus        41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~s-NL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDES-NLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCc-ccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            356899999 7889999999999999667888875321111 11110                   00  223  33344


Q ss_pred             cccCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           88 HDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        88 ~d~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..+...    ...++|+||.+..                 |...-..+-++|.+.++.||+.+....+|
T Consensus       119 ~~i~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~G  170 (392)
T PRK07878        119 FRLDPSNAVELFSQYDLILDGTD-----------------NFATRYLVNDAAVLAGKPYVWGSIYRFEG  170 (392)
T ss_pred             ccCChhHHHHHHhcCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEeccCEE
Confidence            444332    1236899997651                 11222235578888888899887766555

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=95.13  E-value=0.19  Score=46.52  Aligned_cols=33  Identities=36%  Similarity=0.449  Sum_probs=30.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+| .|++|..++..|.+.| |+|++++++.
T Consensus         1 mkI~vIG-lG~~G~~lA~~La~~G-~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIG-LGYVGLPLAALLADLG-HEVTGVDIDQ   33 (411)
T ss_pred             CEEEEEC-CCchhHHHHHHHHhcC-CeEEEEECCH
Confidence            6899998 8999999999999999 9999999854

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.08  E-value=0.33  Score=39.06  Aligned_cols=32  Identities=25%  Similarity=0.348  Sum_probs=27.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      +|+|.| .|.+|+.+++.|.+.|..++++++..
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D   32 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFD   32 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            588999 68999999999999995578888875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=95.03  E-value=0.16  Score=41.93  Aligned_cols=92  Identities=22%  Similarity=0.357  Sum_probs=52.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcC-CCe-EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENE-KNE-VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g-~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      |+|.|+| .|.||..+++.+.+.. ..+ |.+.+|...+ ...+...+..   ... .|+.+.. .++|.++-+|+.   
T Consensus         1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek-~~~~~~~~~~---~~~-s~ide~~-~~~DlvVEaAS~---   70 (255)
T COG1712           1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEK-AKELEASVGR---RCV-SDIDELI-AEVDLVVEAASP---   70 (255)
T ss_pred             CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHH-HHHHHhhcCC---Ccc-ccHHHHh-hccceeeeeCCH---
Confidence            5788888 8999999999876541 244 5555654322 2222222221   111 3444433 468999988842   


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                     +..+...-.+.++|+.+|.+|..+
T Consensus        71 ---------------~Av~e~~~~~L~~g~d~iV~SVGA   94 (255)
T COG1712          71 ---------------EAVREYVPKILKAGIDVIVMSVGA   94 (255)
T ss_pred             ---------------HHHHHHhHHHHhcCCCEEEEechh
Confidence                           234445555556677777777654

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.072  Score=46.22  Aligned_cols=36  Identities=14%  Similarity=0.310  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -.+++|+|+|.++.+|+.++..|+..| ..|+++.+.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~g-atVtv~~s~  191 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKN-ASVTILHSR  191 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCC-CeEEEEeCC
Confidence            457999999999999999999999999 899988763

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.03  E-value=0.18  Score=43.11  Aligned_cols=90  Identities=24%  Similarity=0.262  Sum_probs=56.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a  105 (346)
                      |+|||+|||+= |+.|++.|.+.| + |.+..-.+  ....... ...+......+-+.+...       .+++.||+..
T Consensus         1 m~ILvlgGTtE-~r~la~~L~~~g-~-v~~sv~t~--~g~~~~~-~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDAT   74 (249)
T PF02571_consen    1 MKILVLGGTTE-GRKLAERLAEAG-Y-VIVSVATS--YGGELLK-PELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDAT   74 (249)
T ss_pred             CEEEEEechHH-HHHHHHHHHhcC-C-EEEEEEhh--hhHhhhc-cccCCceEEECCCCCHHHHHHHHHhCCCcEEEECC
Confidence            79999999986 999999999999 6 44332211  1111110 111345566666633321       3799999875


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                      =++               ......++.++|++.++.++
T Consensus        75 HPf---------------A~~is~na~~a~~~~~ipyl   97 (249)
T PF02571_consen   75 HPF---------------AAEISQNAIEACRELGIPYL   97 (249)
T ss_pred             Cch---------------HHHHHHHHHHHHhhcCcceE
Confidence            111               23457788999999998554

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=95.01  E-value=0.047  Score=50.30  Aligned_cols=75  Identities=12%  Similarity=0.154  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      .+++|||+|+ |.+|+.+++.|...|...+++.+|+.. +...+...+.  ....+..+-......+.|+||++.+...
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~-ra~~La~~~~--~~~~~~~~~l~~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIE-KAQKITSAFR--NASAHYLSELPQLIKKADIIIAAVNVLE  254 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHH-HHHHHHHHhc--CCeEecHHHHHHHhccCCEEEECcCCCC
Confidence            4689999995 999999999999999668999999642 2233332221  1222222211223346999999886544

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.99  E-value=0.46  Score=39.68  Aligned_cols=70  Identities=10%  Similarity=0.162  Sum_probs=52.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+++|||+| .|-+|..=++.|++.| ..|+++.-.   ..+.+..+.....+++++.+.......+++.||-+.
T Consensus        24 ~~~~VLVVG-GG~VA~RK~~~Ll~~g-A~VtVVap~---i~~el~~l~~~~~i~~~~r~~~~~dl~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIG-GGKAAFIKGKTFLKKG-CYVYILSKK---FSKEFLDLKKYGNLKLIKGNYDKEFIKDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEcCC---CCHHHHHHHhCCCEEEEeCCCChHHhCCCcEEEECC
Confidence            467999999 7889999999999999 899988642   333444555556788888877766666788777543

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=94.99  E-value=0.24  Score=44.56  Aligned_cols=32  Identities=38%  Similarity=0.482  Sum_probs=30.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |||.|+| +||+|.....-|.+.| |+|++++..
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~G-HeVv~vDid   32 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELG-HEVVCVDID   32 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcC-CeEEEEeCC
Confidence            7899998 9999999999999999 999999864

>PLN02775 Probable dihydrodipicolinate reductase

Probab=94.98  E-value=0.21  Score=43.16  Aligned_cols=97  Identities=14%  Similarity=0.151  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhh-hhcCCCCeeEE-ecccCCcc-c---CCCC-EE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLR-KWIGHPRFELI-RHDVTEPL-L---IEVD-QI  101 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~-~~~~~~~~~~~-~~d~~~~~-~---~~~d-~v  101 (346)
                      .+.++|+|.|++|-+|+.+++.+.+.+ .+++.. ++.. .. .... ..... .+.++ ..|+.+.. .   ..+| ++
T Consensus         9 ~~~i~V~V~Ga~G~MG~~~~~av~~~~-~~Lv~~~~~~~-~~-~~~~~~~~g~-~v~~~~~~dl~~~l~~~~~~~~~~Vv   84 (286)
T PLN02775          9 GSAIPIMVNGCTGKMGHAVAEAAVSAG-LQLVPVSFTGP-AG-VGVTVEVCGV-EVRLVGPSEREAVLSSVKAEYPNLIV   84 (286)
T ss_pred             CCCCeEEEECCCChHHHHHHHHHhcCC-CEEEEEecccc-cc-ccccceeccc-eeeeecCccHHHHHHHhhccCCCEEE
Confidence            345799999999999999999999966 777654 3321 11 1111 11111 22222 12332221 1   1588 78


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                      |...-+                  ..+...++.|.+.++++|.=+|.
T Consensus        85 IDFT~P------------------~a~~~~~~~~~~~g~~~VvGTTG  113 (286)
T PLN02775         85 VDYTLP------------------DAVNDNAELYCKNGLPFVMGTTG  113 (286)
T ss_pred             EECCCh------------------HHHHHHHHHHHHCCCCEEEECCC
Confidence            876521                  24566788899999887744443

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.87  E-value=0.14  Score=40.32  Aligned_cols=37  Identities=16%  Similarity=0.293  Sum_probs=29.2

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .-.+|+|+|+|.++.+|+.|+..|.++| ..|++....
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~-atVt~~h~~   69 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKG-ATVTICHSK   69 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TT
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCC-CeEEeccCC
Confidence            3467999999999999999999999999 999887653

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=94.85  E-value=0.22  Score=42.88  Aligned_cols=92  Identities=14%  Similarity=0.170  Sum_probs=53.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEE--eCCCCCCcchhhhhcCCCCeeEE-----ecccCCcccCCCC-EEEEcc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVV--DNYFTGSKDNLRKWIGHPRFELI-----RHDVTEPLLIEVD-QIYHLA  105 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~-----~~d~~~~~~~~~d-~vi~~a  105 (346)
                      +|+|.|++|-+|+.+++.+.+.+ .+++..  ++..  .....-..... ++..+     ..|+.+.....+| ++|...
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~-~~Lv~~~~~~~~--~~~~~~~~~g~-~v~v~~~~~~~~~l~~~~~~~~d~VvIDFT   77 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAG-LEIVPTSFGGEE--EAENEAEVAGK-EILLHGPSEREARIGEVFAKYPELICIDYT   77 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCC-CEEEeeEccccc--cccchhhhccc-ceeeeccccccccHHHHHhhcCCEEEEECC
Confidence            69999999999999999998876 777764  3211  11111111111 33332     2233222222388 888765


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                      -+                  ..+...++.|.+.++++|.=+|
T Consensus        78 ~P------------------~~~~~n~~~~~~~gv~~ViGTT  101 (275)
T TIGR02130        78 HP------------------SAVNDNAAFYGKHGIPFVMGTT  101 (275)
T ss_pred             Ch------------------HHHHHHHHHHHHCCCCEEEcCC
Confidence            21                  1344557888888887764333

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>PLN03096 glyceraldehyde-3-phosphate dehydrogenase A; Provisional

Probab=94.85  E-value=0.22  Score=45.17  Aligned_cols=33  Identities=15%  Similarity=0.399  Sum_probs=26.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVD   64 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~   64 (346)
                      |.++|.|.|. |-||+.+.+.|.+++  ..+|+++.
T Consensus        59 ~~~kVaInGf-GrIGR~vlr~l~~~~~~~~evvaIN   93 (395)
T PLN03096         59 AKIKVAINGF-GRIGRNFLRCWHGRKDSPLDVVAIN   93 (395)
T ss_pred             cccEEEEECc-CHHHHHHHHHHHhCCCCCeEEEEEc
Confidence            4479999999 999999999998774  24666553

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=94.84  E-value=0.14  Score=44.47  Aligned_cols=70  Identities=14%  Similarity=0.096  Sum_probs=39.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .++|.|+| .|.||+.+++.|.+. ..+++.++....+.........+   +......|+.+. ..++|+|+-++.
T Consensus         6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~---g~~~~~~~~eel-l~~~D~Vvi~tp   76 (271)
T PRK13302          6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL---RRPPPVVPLDQL-ATHADIVVEAAP   76 (271)
T ss_pred             eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc---CCCcccCCHHHH-hcCCCEEEECCC
Confidence            57999999 799999999999874 22777655432222222221111   111111222222 235899998873

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=94.83  E-value=0.058  Score=47.87  Aligned_cols=72  Identities=21%  Similarity=0.305  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+++|+|+|+ |-+|..+++.|...|.+.|++++|+.... ..+...+.   ...+..+-......++|+||.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra-~~la~~~g---~~~~~~~~~~~~l~~aDvVi~at~~  248 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA-EELAKELG---GNAVPLDELLELLNEADVVISATGA  248 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHcC---CeEEeHHHHHHHHhcCCEEEECCCC
Confidence            4789999995 99999999999987657899998854222 12222222   1222222111123368999988753

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=94.81  E-value=0.36  Score=44.24  Aligned_cols=32  Identities=25%  Similarity=0.451  Sum_probs=27.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+| .|++|..++..|. .| |+|++++++.
T Consensus         1 mkI~VIG-lGyvGl~~A~~lA-~G-~~VigvD~d~   32 (388)
T PRK15057          1 MKITISG-TGYVGLSNGLLIA-QN-HEVVALDILP   32 (388)
T ss_pred             CEEEEEC-CCHHHHHHHHHHH-hC-CcEEEEECCH
Confidence            6899997 9999999996554 68 9999999854

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=94.78  E-value=0.067  Score=46.82  Aligned_cols=68  Identities=15%  Similarity=0.122  Sum_probs=44.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+++++|+|. |.+|+.+++.|...| .+|++.+|+...    ..... ..+...+..+-......+.|+||++.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G-~~V~v~~R~~~~----~~~~~-~~g~~~~~~~~l~~~l~~aDiVint~  217 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALG-ARVFVGARSSAD----LARIT-EMGLIPFPLNKLEEKVAEIDIVINTI  217 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHHH-HCCCeeecHHHHHHHhccCCEEEECC
Confidence            3689999995 889999999999999 899999985421    11111 11222222111112234799999975

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK13535 erythrose 4-phosphate dehydrogenase; Provisional

Probab=94.78  E-value=0.26  Score=43.95  Aligned_cols=98  Identities=19%  Similarity=0.288  Sum_probs=55.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhh----------------------hcCCCCeeEEec-
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRK----------------------WIGHPRFELIRH-   88 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~----------------------~~~~~~~~~~~~-   88 (346)
                      ++|.|.|. |-||+.+.+.|.+++. .++.++.-+.....+.+.-                      ......+.+... 
T Consensus         2 ~~IaInGf-GrIGR~~lr~l~e~~~~~~l~vvaind~~~~~~~ayll~ydS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~   80 (336)
T PRK13535          2 IRVAINGF-GRIGRNVLRALYESGRRAEITVVAINELADAEGMAHLLKYDTSHGRFAWDVRQERDQLFVGDDAIRLLHER   80 (336)
T ss_pred             eEEEEECc-CHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHhhhccCCCCCCCcEEecCCEEEECCEEEEEEEcC
Confidence            58999999 9999999999998641 2344441111111000000                      011122333321 


Q ss_pred             ccCCccc--CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060           89 DVTEPLL--IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus        89 d~~~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      |..+...  .++|+|+-++|.+.                  .+..+....+.|++.|.+|+.+
T Consensus        81 ~p~~~~w~~~gvDiVle~tG~~~------------------s~~~a~~~l~aGAk~V~iSap~  125 (336)
T PRK13535         81 DIASLPWRELGVDVVLDCTGVYG------------------SREDGEAHIAAGAKKVLFSHPG  125 (336)
T ss_pred             CcccCcccccCCCEEEEccchhh------------------hHHHHHHHHHcCCEEEEecCCc
Confidence            3333332  57999999986432                  3344555566788888888874

>PRK06849 hypothetical protein; Provisional

Probab=94.78  E-value=0.057  Score=49.64  Aligned_cols=35  Identities=20%  Similarity=0.314  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..|+|||||++..+|..+++.|.+.| ++|++++..
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G-~~Vi~~d~~   37 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAG-HTVILADSL   37 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence            46899999999999999999999999 999999874

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.77  E-value=0.13  Score=45.74  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=30.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++|.|+| .|.+|..++..|++.| ++|++++++.
T Consensus         4 ~~~I~vIG-aG~mG~~iA~~l~~~g-~~V~~~d~~~   37 (311)
T PRK06130          4 IQNLAIIG-AGTMGSGIAALFARKG-LQVVLIDVME   37 (311)
T ss_pred             ccEEEEEC-CCHHHHHHHHHHHhCC-CeEEEEECCH
Confidence            46899998 6999999999999999 9999998854

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.76  E-value=0.066  Score=48.77  Aligned_cols=74  Identities=19%  Similarity=0.302  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      ..+++||+| .|-+|.-++++|.++|...|++.+|+.... ..+.+.+   +.+++..+-......++|+||.+.+...
T Consensus       177 ~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA-~~La~~~---~~~~~~l~el~~~l~~~DvVissTsa~~  250 (414)
T COG0373         177 KDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERA-EELAKKL---GAEAVALEELLEALAEADVVISSTSAPH  250 (414)
T ss_pred             ccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHH-HHHHHHh---CCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence            568999999 799999999999999978899999964322 2222222   2445554444444557999998765443

>PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated

Probab=94.75  E-value=0.4  Score=42.77  Aligned_cols=97  Identities=12%  Similarity=0.180  Sum_probs=56.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----------------------CCCeeEEe-c
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----------------------HPRFELIR-H   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----------------------~~~~~~~~-~   88 (346)
                      .+||.|.|. |-+|+.+++.+.+++..++.+..... ...+.+.-++.                      ...+++.. .
T Consensus         2 ~ikigInG~-GRiGr~v~r~~~~~~~~~ivaind~~-~~~~~~a~ll~yDs~~g~~~~~v~~~g~~l~~~g~~i~v~~~~   79 (334)
T PRK08955          2 TIKVGINGF-GRIGRLALRAAWDWPELEFVQINDPA-GDAATLAHLLEFDSVHGRWHHEVTAEGDAIVINGKRIRTTQNK   79 (334)
T ss_pred             CeEEEEECc-CHHHHHHHHHHHhCCCcEEEEecCCC-CCHHHHHHHhhhhccCCCCCCCEEEcCCEEEECCEEEEEEecC
Confidence            479999999 99999999999877645665554211 01111111110                      11122221 1


Q ss_pred             ccCCcccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060           89 DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus        89 d~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                      |..+....++|+||-++|.+.                  ....+....+.|++.|.+|+.
T Consensus        80 ~~~~~~w~gvDiVle~tG~~~------------------s~~~a~~hl~aGak~V~iSap  121 (334)
T PRK08955         80 AIADTDWSGCDVVIEASGVMK------------------TKALLQAYLDQGVKRVVVTAP  121 (334)
T ss_pred             ChhhCCccCCCEEEEccchhh------------------cHHHHHHHHHCCCEEEEECCC
Confidence            333333448999999987543                  233445555778888888877

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.72  E-value=0.24  Score=46.39  Aligned_cols=73  Identities=19%  Similarity=0.152  Sum_probs=49.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +++|+|+|+ |..|.++++.|.++| +.|.+.+......  ...++.. ..++.+..+...+....++|.||...|..
T Consensus         5 ~~~~~v~G~-g~~G~~~a~~l~~~g-~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~~~~~~~~d~vv~spgi~   78 (445)
T PRK04308          5 NKKILVAGL-GGTGISMIAYLRKNG-AEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLKDALDNGFDILALSPGIS   78 (445)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCCHHHHhCCCEEEECCCCC
Confidence            679999996 579999999999999 9999998654221  1111111 13566665553333334689999877654

>cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1

Probab=94.70  E-value=0.27  Score=45.50  Aligned_cols=103  Identities=11%  Similarity=0.148  Sum_probs=62.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc----------------------hhhhhcCCCCeeEEecc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD----------------------NLRKWIGHPRFELIRHD   89 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~----------------------~~~~~~~~~~~~~~~~d   89 (346)
                      +.+|+|+|++| +|.++++.|...|...+++++...-....                      .+.++-..-.+.++..+
T Consensus        20 ~s~VlliG~gg-lGsEilKNLvL~GIg~~tIvD~~~V~~sDL~~nFfl~~~diGk~kA~~~~~~L~eLNp~V~i~~~~e~   98 (425)
T cd01493          20 SAHVCLLNATA-TGTEILKNLVLPGIGSFTIVDGSKVDEEDLGNNFFLDASSLGKSRAEATCELLQELNPDVNGSAVEES   98 (425)
T ss_pred             hCeEEEEcCcH-HHHHHHHHHHHcCCCeEEEECCCcCchhhccccccCChhhcCcHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            56899998655 99999999999996688888753211000                      01111111123444443


Q ss_pred             cCC-----cc-cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           90 VTE-----PL-LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        90 ~~~-----~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      ..+     .. ..++|+||.+..                 +......+.+.|++.++.+|+++|.+.||
T Consensus        99 ~~~ll~~~~~f~~~fdiVI~t~~-----------------~~~~~~~L~~~c~~~~iPlI~~~s~G~~G  150 (425)
T cd01493          99 PEALLDNDPSFFSQFTVVIATNL-----------------PESTLLRLADVLWSANIPLLYVRSYGLYG  150 (425)
T ss_pred             cchhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEecccCEE
Confidence            321     11 225788875321                 11123346688899899999999988887

APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain.

>cd08293 PTGR2 Prostaglandin reductase

Probab=94.67  E-value=0.056  Score=48.67  Aligned_cols=33  Identities=21%  Similarity=0.097  Sum_probs=29.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~   66 (346)
                      .+|||+||+|.+|..+++.+...| . +|++++++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G-~~~Vi~~~~s  189 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLG-CSRVVGICGS  189 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcC-CCEEEEEcCC
Confidence            799999999999999999988889 7 78888764

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN00203 glutamyl-tRNA reductase

Probab=94.65  E-value=0.072  Score=50.49  Aligned_cols=74  Identities=22%  Similarity=0.266  Sum_probs=45.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +++|+|+|+ |-+|+.+++.|...|...|++++|+.... ..+...+....+.+...+-......+.|+||.+.+.
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era-~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s  339 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERV-AALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSS  339 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHH-HHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCC
Confidence            689999996 99999999999999944799999864222 222222211112222222111223479999987643

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=94.62  E-value=0.14  Score=48.62  Aligned_cols=35  Identities=23%  Similarity=0.288  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +-|+|.|+| +|.+|+.++..|+++| ++|++++++.
T Consensus         3 ~i~kIavIG-~G~MG~~iA~~la~~G-~~V~v~D~~~   37 (495)
T PRK07531          3 MIMKAACIG-GGVIGGGWAARFLLAG-IDVAVFDPHP   37 (495)
T ss_pred             CcCEEEEEC-cCHHHHHHHHHHHhCC-CeEEEEeCCH
Confidence            346899997 9999999999999999 9999999854

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=94.62  E-value=0.064  Score=47.69  Aligned_cols=35  Identities=23%  Similarity=0.170  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..|+|+|.| .|-||..++..|.+.| ++|+++.|..
T Consensus         4 ~~m~I~IiG-~GaiG~~lA~~L~~~g-~~V~~~~r~~   38 (313)
T PRK06249          4 ETPRIGIIG-TGAIGGFYGAMLARAG-FDVHFLLRSD   38 (313)
T ss_pred             cCcEEEEEC-CCHHHHHHHHHHHHCC-CeEEEEEeCC
Confidence            458999997 8999999999999999 9999999853

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=94.59  E-value=1.3  Score=41.48  Aligned_cols=86  Identities=14%  Similarity=0.120  Sum_probs=54.3

Q ss_pred             CEEEEEcCc---hhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGA---GFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~t---G~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ++|+|.|+|   |-+|..+.+.|.+.| +  +|+.++....    ..      .+++.+ .++.+. ...+|.++-+.. 
T Consensus         8 ~siavvGaS~~~~~~g~~~~~~l~~~g-f~g~v~~Vnp~~~----~i------~G~~~~-~sl~~l-p~~~Dlavi~vp-   73 (447)
T TIGR02717         8 KSVAVIGASRDPGKVGYAIMKNLIEGG-YKGKIYPVNPKAG----EI------LGVKAY-PSVLEI-PDPVDLAVIVVP-   73 (447)
T ss_pred             CEEEEEccCCCCCchHHHHHHHHHhCC-CCCcEEEECCCCC----cc------CCcccc-CCHHHC-CCCCCEEEEecC-
Confidence            589999998   779999999999999 6  6777754211    11      112211 122221 124788876541 


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeccc
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE  149 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~  149 (346)
                                       -..+..+++.|.+.|+ .+|.+|+.+
T Consensus        74 -----------------~~~~~~~l~e~~~~gv~~~vi~s~gf   99 (447)
T TIGR02717        74 -----------------AKYVPQVVEECGEKGVKGAVVITAGF   99 (447)
T ss_pred             -----------------HHHHHHHHHHHHhcCCCEEEEECCCc
Confidence                             2245677888888888 577777764

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=94.59  E-value=0.64  Score=33.28  Aligned_cols=83  Identities=16%  Similarity=0.119  Sum_probs=54.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcch--hhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN--LRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      +|||+||-.-.-..+-+.+.+.| .+.....|........  +..                 ...++|.||......++ 
T Consensus         1 ~vliVGG~~~~~~~~~~~~~~~G-~~~~~hg~~~~~~~~~~~l~~-----------------~i~~aD~VIv~t~~vsH-   61 (97)
T PF10087_consen    1 SVLIVGGREDRERRYKRILEKYG-GKLIHHGRDGGDEKKASRLPS-----------------KIKKADLVIVFTDYVSH-   61 (97)
T ss_pred             CEEEEcCCcccHHHHHHHHHHcC-CEEEEEecCCCCccchhHHHH-----------------hcCCCCEEEEEeCCcCh-
Confidence            58999996677777888888888 7766654432111111  111                 12347999987755442 


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                    .....+-+.|++.+++++|+.+.+
T Consensus        62 --------------~~~~~vk~~akk~~ip~~~~~~~~   85 (97)
T PF10087_consen   62 --------------NAMWKVKKAAKKYGIPIIYSRSRG   85 (97)
T ss_pred             --------------HHHHHHHHHHHHcCCcEEEECCCC
Confidence                          245667789999999999988654

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=94.56  E-value=0.079  Score=46.64  Aligned_cols=68  Identities=16%  Similarity=0.104  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+++++|+|. |.+|+.+++.|...| .+|++++|+... ....    ...+.+.+..+-......+.|+||++.
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~G-a~V~v~~r~~~~-~~~~----~~~G~~~~~~~~l~~~l~~aDiVI~t~  218 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALG-ANVTVGARKSAH-LARI----TEMGLSPFHLSELAEEVGKIDIIFNTI  218 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHH-HHHH----HHcCCeeecHHHHHHHhCCCCEEEECC
Confidence            3689999995 789999999999999 899999986321 1111    112333332221122234699999975

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=94.55  E-value=0.065  Score=48.15  Aligned_cols=36  Identities=11%  Similarity=0.113  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+||+|.+|..+++.+...| .+|++++++
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G-~~Vi~~~~~  185 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKG-CYVVGSAGS  185 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcC-CEEEEEeCC
Confidence            346899999999999999999999999 788887764

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.49  E-value=0.35  Score=44.01  Aligned_cols=35  Identities=29%  Similarity=0.479  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ...+|+|+| .|.+|.++++.|...|..++++++..
T Consensus        40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356899998 78899999999999996688888764

>PLN02256 arogenate dehydrogenase

Probab=94.42  E-value=0.098  Score=46.17  Aligned_cols=40  Identities=15%  Similarity=0.223  Sum_probs=34.0

Q ss_pred             hhccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           26 SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        26 ~~~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +...+..|+|.|+| .|.+|+.+++.|.+.| ++|++++|+.
T Consensus        30 ~~~~~~~~kI~IIG-~G~mG~slA~~L~~~G-~~V~~~d~~~   69 (304)
T PLN02256         30 ELEKSRKLKIGIVG-FGNFGQFLAKTFVKQG-HTVLATSRSD   69 (304)
T ss_pred             hhccCCCCEEEEEe-eCHHHHHHHHHHHhCC-CEEEEEECcc
Confidence            33455678999999 7999999999999999 8999998863

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=94.40  E-value=0.084  Score=48.94  Aligned_cols=74  Identities=18%  Similarity=0.347  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ..+++|+|+|+ |-+|..+++.|...|..+|++++|+.... ..+...+.   ...+..+-......++|+||.+.+..
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra-~~la~~~g---~~~i~~~~l~~~l~~aDvVi~aT~s~  251 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA-EDLAKELG---GEAVKFEDLEEYLAEADIVISSTGAP  251 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcC---CeEeeHHHHHHHHhhCCEEEECCCCC
Confidence            34689999995 99999999999998866899998854221 11222221   12222221112233699999986543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=94.39  E-value=0.11  Score=46.46  Aligned_cols=36  Identities=17%  Similarity=0.190  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+||+|.+|..+++.+...| .+|++++++
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G-~~Vi~~~~s  172 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKG-CKVVGAAGS  172 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCC
Confidence            346799999999999999999998889 788888764

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.38  E-value=0.15  Score=43.82  Aligned_cols=35  Identities=26%  Similarity=0.346  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+|++| +|..+++.+...| .+|++++++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g-~~v~~~~~~  167 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAG-ARVIVTDRS  167 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcC-CeEEEEcCC
Confidence            3467999999999 9999999999999 899888774

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.34  E-value=0.076  Score=50.73  Aligned_cols=35  Identities=20%  Similarity=0.323  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++++|+|+ |.+|+.++..|.+.| .+|++++|+.
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G-~~V~i~nR~~  412 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKG-ARVVIANRTY  412 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEcCCH
Confidence            3679999997 899999999999999 7999998853

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.32  E-value=0.24  Score=43.91  Aligned_cols=35  Identities=20%  Similarity=0.225  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|.|.| .|-||+.+++.|..-| .+|.+++|..
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG-~~V~~~~~~~  169 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWG-FPLRCWSRSR  169 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCC
Confidence            368999998 9999999999999999 9999998743

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.28  E-value=0.17  Score=44.32  Aligned_cols=33  Identities=24%  Similarity=0.279  Sum_probs=30.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ++|.|+| +|.+|..++..|..+| ++|++++++.
T Consensus         4 ~kIaViG-aG~mG~~iA~~la~~G-~~V~l~d~~~   36 (287)
T PRK08293          4 KNVTVAG-AGVLGSQIAFQTAFHG-FDVTIYDISD   36 (287)
T ss_pred             cEEEEEC-CCHHHHHHHHHHHhcC-CeEEEEeCCH
Confidence            6899998 6999999999999999 9999999864

>PRK07411 hypothetical protein; Validated

Probab=94.26  E-value=0.39  Score=44.09  Aligned_cols=102  Identities=20%  Similarity=0.166  Sum_probs=61.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-------------------cC--CC--CeeEEec
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------------------IG--HP--RFELIRH   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~--~~~~~~~   88 (346)
                      +.+|+|+| .|.+|.++++.|...|...+++++...-.. ..+.++                   +.  .+  .++.+..
T Consensus        38 ~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~-sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~  115 (390)
T PRK07411         38 AASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDS-SNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET  115 (390)
T ss_pred             cCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecc-cccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence            46899998 778999999999999966788887542111 111110                   00  12  3444444


Q ss_pred             ccCCcc----cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           89 DVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        89 d~~~~~----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      .++...    ..++|+||.+..                 |...-..+-++|.+.++.+|+.+...-+|
T Consensus       116 ~~~~~~~~~~~~~~D~Vvd~~d-----------------~~~~r~~ln~~~~~~~~p~v~~~~~g~~g  166 (390)
T PRK07411        116 RLSSENALDILAPYDVVVDGTD-----------------NFPTRYLVNDACVLLNKPNVYGSIFRFEG  166 (390)
T ss_pred             ccCHHhHHHHHhCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEEEccCEE
Confidence            444321    236999998762                 11122234577888888888776554444

>PRK07574 formate dehydrogenase; Provisional

Probab=94.22  E-value=0.17  Score=46.18  Aligned_cols=35  Identities=23%  Similarity=0.301  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+|+|.|+| .|-||+.+++.|..-| .+|.+++|..
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG-~~V~~~dr~~  225 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFD-VKLHYTDRHR  225 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEECCCC
Confidence            478999999 7999999999999999 9999999854

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.20  E-value=0.14  Score=44.72  Aligned_cols=34  Identities=18%  Similarity=0.401  Sum_probs=31.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      -.+++|+|+|-+|.+|+.++..|+++| +.|++..
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g-~tVtv~~  189 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAAN-ATVTIAH  189 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCC-CEEEEEC
Confidence            458999999999999999999999999 9999984

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.19  E-value=0.27  Score=34.29  Aligned_cols=34  Identities=21%  Similarity=0.449  Sum_probs=28.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ..++++|.|. |.+|+.+++.|.+.+..+|.+.+|
T Consensus        22 ~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          22 KGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4679999997 999999999999984377877765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=94.18  E-value=0.068  Score=47.57  Aligned_cols=69  Identities=19%  Similarity=0.314  Sum_probs=52.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a  105 (346)
                      +++||+.| +||+.+.+++.|.+++...|++-+|..    ...+++.....++.+..|+.+...      ..-|.++.+.
T Consensus         2 ~~~vlllg-sg~v~~p~~d~ls~~~dv~vtva~~~~----~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSLl   76 (445)
T KOG0172|consen    2 KKGVLLLG-SGFVSRPVADFLSRKKDVNVTVASRTL----KDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISLL   76 (445)
T ss_pred             CcceEEec-CccccchHHHHHhhcCCceEEEehhhH----HHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeeec
Confidence            56899998 999999999999999877888888743    233344444568889999998762      2578888765

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.18  E-value=0.092  Score=42.54  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=27.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|.|.|+ |.+|+.++..++..| ++|++++++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G-~~V~l~d~~~   32 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAG-YEVTLYDRSP   32 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTT-SEEEEE-SSH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCC-CcEEEEECCh
Confidence            6889995 999999999999999 9999999864

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.18  E-value=0.24  Score=47.03  Aligned_cols=71  Identities=15%  Similarity=0.147  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++|+|+| .|-.|...++.|.+.| ++|++.++...    .... +...++.++.++.......++|.||...|..
T Consensus        11 ~~~~v~V~G-~G~sG~aa~~~L~~~G-~~v~~~D~~~~----~~~~-l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~   81 (488)
T PRK03369         11 PGAPVLVAG-AGVTGRAVLAALTRFG-ARPTVCDDDPD----ALRP-HAERGVATVSTSDAVQQIADYALVVTSPGFR   81 (488)
T ss_pred             CCCeEEEEc-CCHHHHHHHHHHHHCC-CEEEEEcCCHH----HHHH-HHhCCCEEEcCcchHhHhhcCCEEEECCCCC
Confidence            367999999 8889999999999999 99999886421    1221 1123555554433222234689999987654

>PRK08818 prephenate dehydrogenase; Provisional

Probab=94.11  E-value=0.19  Score=45.49  Aligned_cols=34  Identities=29%  Similarity=0.254  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~   66 (346)
                      .++|+|+|.+|.||+.+++.|.+. + ++|+++++.
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~~-~~V~g~D~~   38 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRMQ-LEVIGHDPA   38 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCC-CEEEEEcCC
Confidence            579999999999999999999975 5 899999873

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=94.07  E-value=0.36  Score=41.76  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~   67 (346)
                      |+|+|.|+| .|-+|..+++.|.+.|.  +.|.+++|+.
T Consensus         1 ~mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          1 MMKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            468999999 69999999999998872  5788888853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	346
4ef7_B	337	Udp-Xylose Synthase Length = 337		1e-117
2b69_A	343	Crystal Structure Of Human Udp-Glucoronic Acid Deca		1e-113
3icp_A	312	Crystal Structure Of Udp-Galactose 4-Epimerase Leng		2e-31
3aw9_A	308	Structure Of Udp-Galactose 4-Epimerase Mutant Lengt		6e-29
2bll_A	345	Apo-Structure Of The C-Terminal Decarboxylase Domai		5e-28
1u9j_A	358	Crystal Structure Of E. Coli Arna (Pmri) Decarboxyl		2e-27
1z7e_A	660	Crystal Structure Of Full Length Arna Length = 660		3e-27
1z73_A	358	Crystal Structure Of E. Coli Arna Dehydrogenase (de		4e-27
1z7b_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		8e-27
3slg_A	372	Crystal Structure Of Pbgp3 Protein From Burkholderi		9e-27
1z74_A	358	Crystal Structure Of E.Coli Arna Dehydrogenase (Dec		1e-26
1z75_A	358	Crystal Structure Of Arna Dehydrogenase (decarboxyl		1e-26
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		2e-26
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		5e-26
3ehe_A	313	Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-		9e-26
2pzj_A	377	Crystal Structure Of The Bordetella Bronchiseptica		2e-24
2hun_A	336	Crystal Structure Of Hypothetical Protein Ph0414 Fr		3e-23
3ru9_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-22
3ru7_A	351	Specific Recognition Of N-Acetylated Substrates And		2e-22
3lu1_A	364	Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-		2e-22
1g1a_A	361	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		2e-22
3ruc_A	351	Specific Recognition Of N-Acetylated Substrates And		3e-22
2c5e_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		4e-22
2c59_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		6e-22
2c54_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		1e-21
4egb_A	346	3.0 Angstrom Resolution Crystal Structure Of Dtdp-G		2e-21
2c5a_A	379	Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana		2e-21
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		9e-20
1bxk_A	355	Dtdp-Glucose 4,6-Dehydratase From E. Coli Length =		1e-19
3vps_A	321	Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5		4e-19
1orr_A	347	Crystal Structure Of Cdp-tyvelose 2-epimerase Compl		3e-18
2c20_A	330	Crystal Structure Of Udp-Glucose 4-Epimerase Length		7e-18
1sb8_A	352	Crystal Structure Of Pseudomonas Aeruginosa Udp-N-A		1e-17
1kep_A	348	The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydra		4e-17
3sxp_A	362	Crystal Structure Of Helicobacter Pylori Adp-L-Glyc		1e-16
2pk3_A	321	Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose		3e-14
1gy8_A	397	Trypanosoma Brucei Udp-Galactose 4' Epimerase Lengt		3e-14
4b8z_A	320	Crystal Structure Of Human Gdp-l-fucose Synthase Wi		4e-14
4b8w_A	319	Crystal Structure Of Human Gdp-L-Fucose Synthase Wi		4e-14
1kvs_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		9e-14
2udp_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-13
1lrj_A	338	Crystal Structure Of E. Coli Udp-Galactose 4-Epimer		2e-13
1kvr_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		2e-13
1lrk_A	338	Crystal Structure Of Escherichia Coli Udp-Galactose		3e-13
1kvq_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-13
1kvt_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		3e-13
2pzk_A	330	Crystal Structure Of The Bordetella Bronchiseptica		3e-13
1kvu_A	338	Udp-Galactose 4-Epimerase Complexed With Udp-Phenol		5e-13
1a9y_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		6e-13
1a9z_A	338	Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEX		8e-13
3m2p_A	311	The Crystal Structure Of Udp-N-Acetylglucosamine 4-		4e-11
1e6u_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le		6e-11
1bsv_A	321	Gdp-Fucose Synthetase From Escherichia Coli Complex		6e-11
1e7s_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1		1e-10
1bws_A	321	Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E		2e-10
1e7q_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1		2e-10
1e7r_A	321	Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1		3e-10
1hzj_A	348	Human Udp-Galactose 4-Epimerase: Accommodation Of U		4e-10
1i3k_A	348	Molecular Basis For Severe Epimerase-Deficiency Gal		5e-10
3enk_A	341	1.9a Crystal Structure Of Udp-Glucose 4-Epimerase F		1e-09
1ek5_A	348	Structure Of Human Udp-Galactose 4-Epimerase In Com		1e-09
2q1w_A	333	Crystal Structure Of The Bordetella Bronchiseptica		8e-09
1wvg_A	359	Structure Of Cdp-D-Glucose 4,6-Dehydratase From Sal		2e-08
1z45_A	699	Crystal Structure Of The Gal10 Fusion Protein Galac		5e-08
1db3_A	372	E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372		6e-07
2x6t_A	357	Agme Bound To Adp-B-Mannose Length = 357		5e-06
1eq2_A	310	The Crystal Structure Of Adp-L-Glycero-D-Mannohepto		1e-05
1t2a_A	375	Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydr		2e-05
3a1n_A	317	Crystal Structure Of L-Threonine Dehydrogenase From		5e-05
1rkx_A	357	Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose		6e-05
2gn4_A	344	Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehyd		1e-04
3sc6_A	287	2.65 Angstrom Resolution Crystal Structure Of Dtdp-		1e-04
3a9w_A	317	Crystal Structure Of L-Threonine Bound L-Threonine		1e-04
2zkl_A	369	Crystal Structure Of Capsular Polysaccharide Assemb		2e-04
1n7g_A	381	Crystal Structure Of The Gdp-mannose 4,6-dehydratas		3e-04
1i2b_A	404	Crystal Structure Of Mutant T145a Sqd1 Protein Comp		5e-04
1qrr_A	394	Crystal Structure Of Sqd1 Protein Complex With Nad		6e-04
1i24_A	404	High Resolution Crystal Structure Of The Wild-Type		6e-04
3st7_A	369	Crystal Structure Of Capsular Polysaccharide Assemb		7e-04

>pdb|2B69|A Chain A, Crystal Structure Of Human Udp-Glucoronic Acid Decarboxylase Length = 343

Iteration: 1
 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/328 (60%), Positives = 239/328 (72%), Gaps = 6/328 (1%)
Query: 24  RFSKFFQSNM-----RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI 78
           R + +FQ +      RIL+TGGAGF+GSHL DKL   + +EV VVDN+FTG K N+  WI
Sbjct: 14  RENLYFQGHXEKDRKRILITGGAGFVGSHLTDKLXX-DGHEVTVVDNFFTGRKRNVEHWI 72
Query: 79  GHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
           GH  FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLN LGLAKRV
Sbjct: 73  GHENFELINHDVVEPLYIEVDQIYHLASPASPPNYXYNPIKTLKTNTIGTLNXLGLAKRV 132
Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           GAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET  + Y +Q G+E+
Sbjct: 133 GARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETXCYAYXKQEGVEV 192
Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           R+ARIFNT+GPR + +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ L 
Sbjct: 193 RVARIFNTFGPRXHXNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALX 252
Query: 259 EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLG 318
               + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++RKPDI KA   LG
Sbjct: 253 NSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLXLG 312
Query: 319 WEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           WEP + L +GL      FR  L     N
Sbjct: 313 WEPVVPLEEGLNKAIHYFRKELEYQANN 340

>pdb|3ICP|A Chain A, Crystal Structure Of Udp-Galactose 4-Epimerase Length = 312

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 159/327 (48%), Gaps = 36/327 (11%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVDN  +G ++ +     +P  EL   D+ +
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKD 54
Query: 93  PLL---IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTS 148
                 I+ D ++H A           P+     NV+ T N+L  A++ G R ++  S+S
Sbjct: 55  YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS 114
Query: 149 EVYGDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            VYGD  V   P++E Y     PI   S Y   K   E +   Y R  G+     R  N 
Sbjct: 115 TVYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANV 167
Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEP--LTVQAPGTQTRSFCYVSDMVDGLIRLMEG--EN 262
            GPR+      V+ +FI + +R  P  L V   GTQ +S+ YV D V+  +   +   E 
Sbjct: 168 VGPRLRHG---VIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEM 223
Query: 263 TGP---INIGNPGEFTMLELAENVKELINPNVEITMVENTPD------DPRQRKPDITKA 313
             P   +N+GN     +L++A+ V E++    EI +V +TPD      D +     +TK 
Sbjct: 224 DAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKL 283
Query: 314 TELLGWEPKIKLRDGLPLMEDDFRLRL 340
            +L GW P +   + +    +D    L
Sbjct: 284 MKLTGWRPTMTSAEAVKKTAEDLAKEL 310

>pdb|3AW9|A Chain A, Structure Of Udp-Galactose 4-Epimerase Mutant Length = 308

Iteration: 1
 Score =  124 bits (312), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 155/326 (47%), Gaps = 38/326 (11%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD--NYFTGSKDNLRKWIGHPRFELIRHDV 90
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVD     TG    L     H R +L   D 
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDIVQRDTGGSAEL-----HVR-DL--KDY 51
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE 149
           +    I+ D ++H A           P+     NV+ T N+L  A++ G R ++  S+S 
Sbjct: 52  SWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSST 111
Query: 150 VYGDPLV--HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
           VYGD  V   P++E Y     PI   S Y   K   E +   Y R  G+     R  N  
Sbjct: 112 VYGDADVIPTPEEEPY----KPI---SVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV 164
Query: 208 GPRMNIDDGRVVSNFIAQAIRGEP--LTVQAPGTQTRSFCYVSDMVDGLIRLMEG--ENT 263
           GPR+      V+ +FI + +R  P  L V   GTQ +S+ YV D V+  +   +   E  
Sbjct: 165 GPRLRHG---VIYDFIMK-LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD 220
Query: 264 GP---INIGNPGEFTMLELAENVKELINPNVEITMVENTPD------DPRQRKPDITKAT 314
            P   +N+GN     +L++A+ V E++    EI +V +TPD      D +     +TK  
Sbjct: 221 APFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLM 280
Query: 315 ELLGWEPKIKLRDGLPLMEDDFRLRL 340
           +L GW P +   + +    +D    L
Sbjct: 281 KLTGWRPTMTSAEAVKKTAEDLAKEL 306

>pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of Arna Length = 345

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 159/340 (46%), Gaps = 42/340 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISI 56
Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116
Query: 147 TSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176
Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236
Query: 259 EGENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP-- 300
             EN G       INIGNP  E ++ EL E          ++    P     +VE++   
Sbjct: 237 --ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY 294
Query: 301 ----DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
                D   RKP I  A   L WEPKI +++ +    D F
Sbjct: 295 GKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFF 334

>pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase Domain Length = 358

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 308
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D   RKP I  A   L WEPKI +++ +    D F
Sbjct: 309 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFF 347

>pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna Length = 660

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 372
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 373 SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 432
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 492
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 551
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 552 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 610
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D   RKP I  A   L WEPKI +++ +    D F
Sbjct: 611 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFF 649

>pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase (decarboxylase) Domain, S433a Mutant Length = 358

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 158/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           +EVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 AEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 308
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D   RKP I  A   L WEPKI +++ +    D F
Sbjct: 309 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFF 347

>pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619e Mutant Length = 358

Iteration: 1
 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 308
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D    KP I  A   L WEPKI +++ +    D F
Sbjct: 309 KGYQDVEHEKPSIRNAHRCLDWEPKIDMQETIDETLDFF 347

>pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia Pseudomallei Length = 372

Iteration: 1
 Score =  117 bits (293), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 159/348 (45%), Gaps = 45/348 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           ++L+ G  GFIG HL  +++E    EV  +D       D L   + H R      D+T  
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVFGMDM----QTDRLGDLVKHERMHFFEGDITIN 81
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D I  L   A+P  Y   P++  + +    L ++  A + G  ++  ST
Sbjct: 82  KEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPST 141
Query: 148 SEVYG---DPLVHPQDESY-WGNVN-PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           SEVYG   D    P   +  +G +N P  + +C    K++ + +++ Y  + G+   + R
Sbjct: 142 SEVYGMCADEQFDPDASALTYGPINKPRWIYAC---SKQLMDRVIWGYGME-GLNFTLFR 197
Query: 203 IFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            FN  GP ++          RVV+ F+   +RGE +++   G+Q R+F YV D +  L++
Sbjct: 198 PFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMK 257
Query: 257 LMEGEN---TGPI-NIGNP-GEFT-------MLELAENVKELINPNVEITMVENTP---- 300
           ++E  N   TG I NIGNP   F+       MLELA    E  +    + +VE T     
Sbjct: 258 IIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYY 317
Query: 301 ----DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
                D + R P I    + LGW P+    D L  + + +R  +A  R
Sbjct: 318 GNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVADAR 365

>pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase (Decarboxylase) Domain, R619y Mutant Length = 358

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 308
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D    KP I  A   L WEPKI +++ +    D F
Sbjct: 309 KGYQDVEHYKPSIRNAHRCLDWEPKIDMQETIDETLDFF 347

>pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase) Domain, R619m Mutant Length = 358

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 42/339 (12%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-- 91
           R+L+ G  GFIG+HL ++L+  +  EV  +D    GS D + +++ HP F  +  D++  
Sbjct: 15  RVLILGVNGFIGNHLTERLLREDHYEVYGLD---IGS-DAISRFLNHPHFHFVEGDISIH 70
Query: 92  ----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
               E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  ST
Sbjct: 71  SEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPST 130
Query: 148 SEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           SEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R FN
Sbjct: 131 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFN 190
Query: 206 TYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
             GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++ 
Sbjct: 191 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII- 249
Query: 260 GENTGP------INIGNP-GEFTMLELAEN---------VKELINPNVEITMVENTP--- 300
            EN G       INIGNP  E ++ EL E          ++    P     +VE++    
Sbjct: 250 -ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 308
Query: 301 ---DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF 336
               D    KP I  A   L WEPKI +++ +    D F
Sbjct: 309 KGYQDVEHMKPSIRNAHRCLDWEPKIDMQETIDETLDFF 347

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 21/311 (6%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 87  RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST EVYG       D   W   +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTDEVYGSI-----DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233
Query: 261 ENTGPI-NIGNPGEFTMLELAENVKELINPN-VEITMVENTPDDPRQRKPDITKATELLG 318
              G I +IG   E T  EL   + + +  +   +  V +      +   D  K    LG
Sbjct: 234 GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELG 293
Query: 319 WEPKIKLRDGL 329
           + P++   DGL
Sbjct: 294 YRPQVSFADGL 304

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 142/311 (45%), Gaps = 21/311 (6%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 87  RHDVTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+      VD I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST++VYG       D   W   +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTNQVYGSI-----DSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233
Query: 261 ENTGPI-NIGNPGEFTMLELAENVKELINPN-VEITMVENTPDDPRQRKPDITKATELLG 318
              G I +IG   E T  EL   + + +  +   +  V +      +   D  K    LG
Sbjct: 234 GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELG 293
Query: 319 WEPKIKLRDGL 329
           + P++   DGL
Sbjct: 294 YRPQVSFADGL 304

>pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313

Iteration: 1
 Score =  114 bits (285), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I+VTGGAGFIGSH+VDKL  +E NE++V+DN  +G+++ + +     + +L   D+ +  
Sbjct: 4   IVVTGGAGFIGSHVVDKL--SESNEIVVIDNLSSGNEEFVNEAARLVKADLAADDIKD-Y 60
Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD 153
           L   ++++H+A          NP +  + NV+ T  +L   ++ G +RI+ TSTS VYG+
Sbjct: 61  LKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGE 120
Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
             V P  E Y    +PI   S Y   K   E L+  Y     ++  I R  N  G R   
Sbjct: 121 AKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRST- 174
Query: 214 DDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG-ENTGPINIGNP 271
               V+ +FI +  R  E L +   G Q +S+ Y+SD VD ++  + G E     NIG+ 
Sbjct: 175 --HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSE 232
Query: 272 GEFTMLELAENVKEL--INPNVEITMVENTPDDPRQRKPDI------TKATELLGWEPK 322
            +  +  +AE V E   ++P    T         R  K D+       +  + LGW+P+
Sbjct: 233 DQIKVKRIAEIVCEELGLSPRFRFT------GGDRGWKGDVPVMLLSIEKLKRLGWKPR 285

>pdb|2PZJ|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmf In Complex With Nad+ Length = 377

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 24/333 (7%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +N  ++V GGAGF+GS+LV +L+E   N+V VVDN  +  K N+     HP        +
Sbjct: 31  ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPD---HPAVRFSETSI 87
Query: 91  TEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM---LGLAKRVGARI 142
           T+  L+     E D ++HLA         ++P+   + N + TL +   L   KR+   +
Sbjct: 88  TDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVV 147
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              +   +        +       V+     S Y   K   E     YH+QH +    AR
Sbjct: 148 YSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRAR 207
Query: 203 IFNTYGPRMNIDDGR-----------VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             N YGP   +  GR           V   FI +A++G PL ++  G  TR F +V D+ 
Sbjct: 208 FQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVA 267
Query: 252 DGLIRL-MEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP-DDPRQRKPD 309
           +GLI    +G   G  NI +  E ++ +LA  + E+   N E+  +   P D+  +R   
Sbjct: 268 NGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGS 327
Query: 310 ITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV 342
             KA   LG+   + + DGL    +  +  LAV
Sbjct: 328 PEKARRELGFSADVSIDDGLRKTIEWTKANLAV 360

>pdb|2HUN|A Chain A, Crystal Structure Of Hypothetical Protein Ph0414 From Pyrococcus Horikoshii Ot3 Length = 336

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 18/309 (5%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK-DNLRKWIGHPRFELIRHD 89
           +M++LVTGG GFIGS+ +  ++E   + EVI +D    GS   NL+     PR+  ++ D
Sbjct: 3   SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGD 62
Query: 90  VTEPLLI-----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARI 142
           V +  L+     +VD + HLA  +       +P   + +NVIGT  +L   +R     R 
Sbjct: 63  VADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRF 122
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +  ST EVYGD L     E+     + +   S Y   K  ++ L+  + R + +   I R
Sbjct: 123 VHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAASDMLVLGWTRTYNLNASITR 177
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGE 261
             N YGP    +  +++   I +A  G  + +   G   R + YV D V  + + L++GE
Sbjct: 178 CTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE 235
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWE 320
           +    NI    E T LE+ + +  L+    E I +VE+ P    +   D  K T  L W 
Sbjct: 236 SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWR 295
Query: 321 PKIKLRDGL 329
           PK    +G+
Sbjct: 296 PKYTFDEGI 304

>pdb|3RU9|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 34/321 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 84
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 85  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 144
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +G +   
Sbjct: 145 SFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R   N     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELIN-----PNVEITMVENTPDDPRQRKPDI 310
             +++   NI N   G+ T L EL+  + + +N       + I   E    D R  + D+
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADV 319
Query: 311 TKATELLGWEPKIKLRDGLPL 331
           TKA +LL + P IK+R+GL L
Sbjct: 320 TKAIDLLKYRPNIKIREGLRL 340

>pdb|3RU7|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 34/321 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 23  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 78
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 79  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 138
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +G +   
Sbjct: 139 SFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTYGFKTIG 193
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R   N     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 194 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 253
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELIN-----PNVEITMVENTPDDPRQRKPDI 310
             +++   NI N   G+ T L EL+  + + +N       + I   E    D R  + D+
Sbjct: 254 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADV 313
Query: 311 TKATELLGWEPKIKLRDGLPL 331
           TKA +LL + P IK+R+GL L
Sbjct: 314 TKAIDLLKYRPNIKIREGLRL 334

>pdb|3LU1|A Chain A, Crystal Structure Analysis Of Wbgu: A Udp-Galnac 4-Epimerase Length = 364

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 34/321 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 42  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 97
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 98  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 157
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +G +   
Sbjct: 158 SFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTYGFKTIG 212
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R   N     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 213 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 272
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELIN-----PNVEITMVENTPDDPRQRKPDI 310
             +++   NI N   G+ T L EL+  + + +N       + I   E    D R  + D+
Sbjct: 273 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADV 332
Query: 311 TKATELLGWEPKIKLRDGLPL 331
           TKA +LL + P IK+R+GL L
Sbjct: 333 TKAIDLLKYRPNIKIREGLRL 353

>pdb|1G1A|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb)from Salmonella Enterica Serovar Typhimurium Length = 361

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 36/330 (10%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   + G+ ++L       R+     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 92  EPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---- 140
           +   I       + D + HLA  +        P   I+TN++GT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120
Query: 141 ------RILLTSTSEVYGDPLVHPQDES------YWGNVNPIGVRSCYDEGKRVAETLMF 188
                 R    ST EVYGD L HP +         +         S Y   K  ++ L+ 
Sbjct: 121 DKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVR 179
Query: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + YV 
Sbjct: 180 AWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237
Query: 249 DMVDGL-IRLMEGENTGPINIGNPGEFTMLELAENVKELINPNV--------EITMVENT 299
           D    L + + EG+     NIG   E   L++   + +L++  V        +IT V + 
Sbjct: 238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADR 297
Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           P   R+   D  K +  LGW+P      G+
Sbjct: 298 PGHDRRYAIDAGKISRELGWKPLETFESGI 327

>pdb|3RUC|A Chain A, Specific Recognition Of N-Acetylated Substrates And Domain Flexibility In Wbgu: A Udp-Galnac 4-Epimerase Length = 351

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 153/321 (47%), Gaps = 34/321 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++KL++  +  VI +DN+ TG + NL          +W    RF  I
Sbjct: 29  LITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQW---SRFCFI 84
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
             D+      E ++  VD + H A   S      +P+ T  TN+ G LN+L  AK    +
Sbjct: 85  EGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ 144
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +G +   
Sbjct: 145 SFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTYGFKTIG 199
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
            R FN +G R   N     V+  + A  ++G+ + +   G  +R FCY+ +++   I   
Sbjct: 200 LRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSA 259
Query: 259 EGENTGPINIGNP--GEFTML-ELAENVKELIN-----PNVEITMVENTPDDPRQRKPDI 310
             +++   NI N   G+ T L EL+  + + +N       + I   E    D R  + D+
Sbjct: 260 LAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRASQADV 319
Query: 311 TKATELLGWEPKIKLRDGLPL 331
           TKA +LL + P IK+R+GL L
Sbjct: 320 TKAIDLLKYRPNIKIREGLRL 340

>pdb|2C5E|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K217a, With Gdp-Alpha-D-Mannose Bound In The Active Site. Length = 379

Iteration: 1
 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVS--NFIAQA-IRGEPL 232
           Y   K   E L   Y++  GIE RI R  N YGP      GR  +   F  +A    +  
Sbjct: 176 YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREAAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE 292
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V       + 
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
           I  +   P+  R R  D     E LGW P ++L++GL +
Sbjct: 296 IHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRI 333

>pdb|2C59|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), With Gdp-Alpha-D-Mannose And Gdp-Beta-L-Galactose Bound In The Active Site. Length = 379

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           Y   K   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 YGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE 292
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V       + 
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
           I  +   P+  R R  D     E LGW P ++L++GL +
Sbjct: 296 IHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRI 333

>pdb|2C54|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), K178r, With Gdp-Beta-L-Gulose And Gdp-4-Keto-Beta-L-Gulose Bound In Active Site. Length = 379

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           Y   +   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 YGLERLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE 292
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V       + 
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
           I  +   P+  R R  D     E LGW P ++L++GL +
Sbjct: 296 IHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRI 333

>pdb|4EGB|A Chain A, 3.0 Angstrom Resolution Crystal Structure Of Dtdp-Glucose 4,6- Dehydratase (Rfbb) From Bacillus Anthracis Str. Ames In Complex With Nad Length = 346

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 144/315 (45%), Gaps = 19/315 (6%)
Query: 28  FFQSNM-RILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNY-FTGSKDNLRKWIGHPRFE 84
           +FQSN   ILVTGGAGFIGS+ V   +++ E  ++I  D   ++G+ +N++    HP + 
Sbjct: 19  YFQSNAXNILVTGGAGFIGSNFVHYXLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYY 78
Query: 85  LIRHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
            ++ ++    L+E       V  I + A  +       NP+    TNVIGT+ +L L K+
Sbjct: 79  FVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK 138
Query: 138 V-GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               +++  ST EVYG           +    P+   S Y   K  A+ +   Y++ + +
Sbjct: 139 YPHIKLVQVSTDEVYGS----LGKTGRFTEETPLAPNSPYSSSKASADXIALAYYKTYQL 194
Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
            + + R  N YGP    +  +++   +  A+ G+ L +   G   R + +V+D    +  
Sbjct: 195 PVIVTRCSNNYGPYQYPE--KLIPLXVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDV 252
Query: 257 LMEGENTGPI-NIGNPGEFTMLELAENVKELI-NPNVEITMVENTPDDPRQRKPDITKAT 314
           ++     G + NIG   E T +E+ E +  L+     +I  V +     R+   +  K  
Sbjct: 253 VLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKXK 312
Query: 315 ELLGWEPKIKLRDGL 329
               WEPK     GL
Sbjct: 313 NEFDWEPKYTFEQGL 327

>pdb|2C5A|A Chain A, Gdp-Mannose-3', 5' -Epimerase (Arabidopsis Thaliana), Y174f, With Gdp-Beta-L-Galactose Bound In The Active Site Length = 379

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 152/339 (44%), Gaps = 24/339 (7%)
Query: 8   GNHNSASKPPPTPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY 66
           G  N       T   L   +++ S N++I +TG  GFI SH+  +L ++E + VI  D  
Sbjct: 4   GTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRL-KHEGHYVIASD-- 60
Query: 67  FTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPASPI-FYKYNPVKTIK 122
                +++ + +    F L+   V E  L     VD +++LA     + F + N    + 
Sbjct: 61  -WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMY 119
Query: 123 TNVIGTLNMLGLAKRVG-ARILLTSTSEVYGD------PLVHPQDESYWGNVNPIGVRSC 175
            N + + NM+  A+  G  R    S++ +Y +        V  ++   W    P   +  
Sbjct: 120 NNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW----PAEPQDA 175
Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQA-IRGEPL 232
           +   K   E L   Y++  GIE RI R  N YGP      GR    + F  +A    +  
Sbjct: 176 FGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRF 235
Query: 233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE 292
            +   G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V       + 
Sbjct: 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
           I  +   P+  R R  D     E LGW P ++L++GL +
Sbjct: 296 IHHIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRI 333

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 151/318 (47%), Gaps = 23/318 (7%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR+LVTGGAGFIGSH+V+ L+     EV V+DN  TG ++N+ K +   R +L   +  E
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLAR-GLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVE 59
Query: 93  PLLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS-- 148
               E     + H A  AS      +PV   + N++G LN+L   ++ G   L+ +++  
Sbjct: 60  RAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGG 119
Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            +YG+     + E  W    P   +S Y   K   E  +  Y + +G++    R  N YG
Sbjct: 120 AIYGEVPEGERAEETW----PPRPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYG 175
Query: 209 PRMN-IDDGRVVSNFIAQAIRGEPLTVQA---PGTQ--TRSFCYVSDMVDG-LIRLMEGE 261
           PR +   +  VV+ F  + ++G P+T+ A   PG +   R + YV D+ +   + L   E
Sbjct: 176 PRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSLE 235
Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELL--GW 319
             G  N+G     T  E+   V E      E   V+  P  P   +  +    +L+  GW
Sbjct: 236 --GIYNVGTGEGHTTREVLMAVAEAAGKAPE---VQPAPPRPGDLERSVLSPLKLMAHGW 290
Query: 320 EPKIKLRDGLPLMEDDFR 337
            PK+  ++G+ L  D FR
Sbjct: 291 RPKVGFQEGIRLTVDHFR 308

>pdb|1BXK|A Chain A, Dtdp-Glucose 4,6-Dehydratase From E. Coli Length = 355

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 138/327 (42%), Gaps = 36/327 (11%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           +IL+TGGAGFIGS LV  ++    + V+VVD   + G+  +L       RF   + D+ +
Sbjct: 3   KILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICD 62
Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA---------- 135
              +       + D + HLA  +        P   I+TN++GT  +L  A          
Sbjct: 63  RAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTED 122
Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           K+   R    ST EVYGD  +H  D+ ++    P    S Y   K  ++ L+  + R +G
Sbjct: 123 KKSAFRFHHISTDEVYGD--LHSTDD-FFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
           +   I    N YGP    +  +++   I  A+ G+ L V   G Q R + YV D    L 
Sbjct: 180 LPTLITNCSNNYGPYHFPE--KLIPLMILNALAGKSLPVYGNGQQIRDWLYVEDHARALY 237
Query: 256 RLMEGENTGPI-NIGNPGEFTMLELAENVKELIN---PNVE---------ITMVENTPDD 302
            +      G   NIG   E   L++ E + EL+    PN           IT V + P  
Sbjct: 238 CVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPHGVAHYRDLITFVADRPGH 297
Query: 303 PRQRKPDITKATELLGWEPKIKLRDGL 329
             +   D +K    LG  P+     G+
Sbjct: 298 DLRYAIDASKIARELGCVPQETFESGM 324

>pdb|3VPS|A Chain A, Structure Of A Novel Nad Dependent-Ndp-Hexosamine 5,6-Dehydratase, Tuna, Involved In Tunicamycin Biosynthesis Length = 321

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 146/316 (46%), Gaps = 34/316 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK---DNLRKWIGHPRFELIRHDV 90
           RIL+TGGAGFIG HL   L+ +   EV V+D+         +   K++  P  EL   D+
Sbjct: 9   RILITGGAGFIGGHLARALVAS-GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL 67
Query: 91  TEPLLIEVDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
           +     +V  +YHLA   S P  +K  P+  +  NV    ++L L   VG  ++++ ST 
Sbjct: 68  S-----DVRLVYHLASHKSVPRSFK-QPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTC 120
Query: 149 EVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI--EIRIARIF 204
           EVYG  D L  P+D       +P+  RS Y   K V   ++   H++  +  E+ I R F
Sbjct: 121 EVYGQADTLPTPED-------SPLSPRSPYAASK-VGLEMVAGAHQRASVAPEVGIVRFF 172
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
           N YGP    D   +V    A  +    L V+  G Q R F Y++D+VD L+ L       
Sbjct: 173 NVYGPGERPD--ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPS 230
Query: 265 PINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIK 324
            +N G+ G+   +     + +  +P  E+   +  P++  + + D    T  +G      
Sbjct: 231 VVNFGS-GQSLSVNDVIRILQATSPAAEVARKQPRPNEITEFRADTALQTRQIGE----- 284
Query: 325 LRDGLPLMEDDFRLRL 340
            R G   +E+  RL L
Sbjct: 285 -RSGGIGIEEGIRLTL 299

>pdb|1ORR|A Chain A, Crystal Structure Of Cdp-tyvelose 2-epimerase Complexed With Nad And Cdp Length = 347

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 35/334 (10%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELI------ 86
           ++L+TGG GF+GS+L    +  +  ++IV DN    G+ DNL        FE +      
Sbjct: 3   KLLITGGCGFLGSNLASFALS-QGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 61
Query: 87  RHDVTEPLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--IL 143
           ++DVT  +   + D  +HLA   +      NP    + NV GTLN+L   ++  +   I+
Sbjct: 62  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 121
Query: 144 LTSTSEVYGDPLVHPQDESY-----------WGNVNPIGVRSCYDEGKRVAETLMFDYHR 192
            +ST++VYGD   +  +E+            +     +   S Y   K  A+  M DY R
Sbjct: 122 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 181
Query: 193 QHGIEIRIARIFNTYGPRM--NIDDGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFC 245
             G+   + R  + YG R     D G V   F  +A+       +P T+   G Q R   
Sbjct: 182 IFGLNTVVFRHSSMYGGRQFATYDQGWV-GWFCQKAVEIKNGINKPFTISGNGKQVRDVL 240
Query: 246 YVSDMVDGLIRLMEGENT---GPINIGNP--GEFTMLELAENVKELINPNVEITMVENTP 300
           +  DM+      +   +       NIG       ++LEL + +++  N ++  T +    
Sbjct: 241 HAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRE 300
Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMED 334
            D R    DI K T  + W PK+  +DG+  M D
Sbjct: 301 SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYD 334

>pdb|2C20|A Chain A, Crystal Structure Of Udp-Glucose 4-Epimerase Length = 330

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 135/318 (42%), Gaps = 45/318 (14%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK----WIGHPRFELIRHDV 90
           IL+ GGAG+IGSH V KL++ E   V+VVDN  TG +D + +    + G  R +    DV
Sbjct: 4   ILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDV 62
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE 149
                IE   + H A  +        P++    NV G L +L +       + + +ST+ 
Sbjct: 63  FTQENIEA--VMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAA 120
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
            YG+  V    E      NP    + Y E K   E ++  Y +   +  +I R FN  G 
Sbjct: 121 TYGEVDVDLITEETM--TNPT---NTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGA 175
Query: 210 RMNI---DDGRVVSNFIAQAIRGEPLTVQAP------------------GTQTRSFCYVS 248
             N    +D R  ++ I       PL +Q                    GT  R + +V 
Sbjct: 176 TPNGIIGEDHRPETHLI-------PLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE 228
Query: 249 DMVD----GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR 304
           D+V     GL  L  G  +   N+GN   F++ E+ + V+E+ N  +   +      DP 
Sbjct: 229 DLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPA 288
Query: 305 QRKPDITKATELLGWEPK 322
           +      KA E LGW+P+
Sbjct: 289 RLVASSQKAKEKLGWDPR 306

>pdb|1SB8|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Udp-N-Acetylglucosamine 4- Epimerase Complexed With Udp-N-Acetylgalactosamine Length = 352

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 144/321 (44%), Gaps = 34/321 (10%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---------RKWIGHPRFELI 86
           L+TG AGFIGS+L++ L++ ++ +V+ +DN+ TG + NL         ++W     F+ I
Sbjct: 31  LITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQW---SNFKFI 86
Query: 87  RHDV-----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           + D+            VD + H A   S      +P+ +  TN+ G LNML  A+    +
Sbjct: 87  QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ 146
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
                ++S  YGD    P+ E   G   P+   S Y   K V E     + R +G     
Sbjct: 147 SFTYAASSSTYGDHPGLPKVEDTIG--KPL---SPYAVTKYVNELYADVFSRCYGFSTIG 201
Query: 201 ARIFNTYGPRM--NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG-LIRL 257
            R FN +G R   N     V+  + +  I+G+ + +   G  +R FCY+ + V   L+  
Sbjct: 202 LRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAA 261
Query: 258 MEGENT--GPINIGNPGEFTMLELAENVKELINPN-----VEITMVENTPDDPRQRKPDI 310
             G +      NI   G  ++ +L   +++ +  N      E    +    D R    DI
Sbjct: 262 TAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADI 321
Query: 311 TKATELLGWEPKIKLRDGLPL 331
           +KA +LLG+ PK  +  G+ L
Sbjct: 322 SKAAKLLGYAPKYDVSAGVAL 342

>pdb|1KEP|A Chain A, The Crystal Structure Of Dtdp-D-Glucose 4,6-Dehydratase (Rmlb) From Streptococcus Suis With Dtdp-Xylose Bound Length = 348

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 133/308 (43%), Gaps = 25/308 (8%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVTE 92
           I+VTGGAGFIGS+ V  +  N  +  V V+D   + G+K NL   +G  R EL+  D+ +
Sbjct: 7   IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILG-DRVELVVGDIAD 65
Query: 93  PLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
             L++      D I H A  +       +P   I TN IGT  +L  A++   R    ST
Sbjct: 66  AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 125
Query: 148 SEVYGD-PLVHP---------QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 197
            EVYGD PL            +  +   N NP    S Y   K  ++ ++  + R  G++
Sbjct: 126 DEVYGDLPLREDLPGHGEGPGEKFTAETNYNP---SSPYSSTKAASDLIVKAWVRSFGVK 182
Query: 198 IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
             I+   N YGP  +I+  + +   I   + G    +   G   R + + +D   G+  +
Sbjct: 183 ATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240
Query: 258 MEGENTGPIN-IGNPGEFTMLELAENVKELI-NPNVEITMVENTPDDPRQRKPDITKATE 315
           +     G    IG  GE    E+ E + E +  P      V +      +   D +K  +
Sbjct: 241 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRD 300
Query: 316 LLGWEPKI 323
            LGW P+ 
Sbjct: 301 ELGWTPQF 308

>pdb|3SXP|A Chain A, Crystal Structure Of Helicobacter Pylori Adp-L-Glycero-D-Manno- Heptose-6-Epimerase (Rfad, Hp0859) Length = 362

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 34/287 (11%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFTGS--KDNLRKWIGH------PR 82
           N  IL+TGGAGF+GS+L     EN  K +V+V+D + + +   +N    +GH       +
Sbjct: 10  NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFK 69
Query: 83  FELIRHDVTEPL------LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            E+I  D+  PL       +  D ++H A  +       N    +KTN    LN+L +A+
Sbjct: 70  GEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTM--LNQELVMKTNYQAFLNLLEIAR 127
Query: 137 RVGARILLTSTSEVYGD---PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
              A+++  S++ VYG+   P V  ++ES      P    + Y   K   +  +   H  
Sbjct: 128 SKKAKVIYASSAGVYGNTKAPNVVGKNES------P---ENVYGFSKLCMDEFVLS-HSN 177
Query: 194 HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
             +++ + R FN YGPR    +    +V      A+  + + +   G Q R F Y+ D++
Sbjct: 178 DNVQVGL-RYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236
Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
              ++ M+ + +G  N+G     +  E+   +KE +  + ++T ++N
Sbjct: 237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKN 282

>pdb|2PK3|A Chain A, Crystal Structure Of A Gdp-4-Keto-6-Deoxy-D-Mannose Reductase Length = 321

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 42/328 (12%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           +MR L+TG AGF+G +L + L E +  EV      F  S++N  K    P  E+I  D+ 
Sbjct: 12  SMRALITGVAGFVGKYLANHLTE-QNVEV------FGTSRNNEAKL---PNVEMISLDIM 61
Query: 92  EPLL-------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARI 142
           +          I+ D I+HLA  +S      N   T  TNV GTL++L   +   +  RI
Sbjct: 62  DSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRI 121
Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           L   +SE YG  ++ P+ ES     N +   S Y   K     L   Y + +G++I   R
Sbjct: 122 LTIGSSEEYG--MILPE-ESPVSEENQLRPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 178
Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAI-----RGEPLTVQAPGTQTRSFCYVSDMVDGLIRL 257
            FN  GP  ++  G V  +F  Q +     + EP+         R F  V D+V     L
Sbjct: 179 TFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLL 236
Query: 258 MEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT------ 311
            +   TG +     G  T ++   ++  L   NV+I    +T  +P Q +P         
Sbjct: 237 SQYGKTGDVYNVCSGIGTRIQDVLDLL-LAMANVKI----DTELNPLQLRPSEVPTLIGS 291
Query: 312 --KATELLGWEPKIKLRDGLPLMEDDFR 337
             +  +  GW+P+I L   L  +   +R
Sbjct: 292 NKRLKDSTGWKPRIPLEKSLFEILQSYR 319

>pdb|1GY8|A Chain A, Trypanosoma Brucei Udp-Galactose 4' Epimerase Length = 397

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/386 (22%), Positives = 151/386 (39%), Gaps = 80/386 (20%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHPRFELIRH 88
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+     G  D++       R +L + 
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVAR-KLQQS 59
Query: 89  DVTEPLLIE-------------------------VDQIYHLACPASPIFYKYNPVKTIKT 123
           D  +P   +                         +D + H+    +      +P+K    
Sbjct: 60  DGPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDN 119
Query: 124 NVIGTLNML-GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV------RSCY 176
           NV+G L +L  +      +I+ +S++ ++G+P +     S   N  PI +       S Y
Sbjct: 120 NVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM----GSVSTNAEPIDINAKKSPESPY 175
Query: 177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTV 234
            E K +AE ++ D    +GI+    R FN  G   + D G     S  +   I G  ++ 
Sbjct: 176 GESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD 235
Query: 235 QAP---------------------------GTQTRSFCYVSDMVDGLIRLMEG-ENTGP- 265
            AP                           GT  R + +V D+    I  ++  E  GP 
Sbjct: 236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPN 295
Query: 266 --------INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELL 317
                    N+G    +++ E+ E  ++     + +        DP        KA E+L
Sbjct: 296 DKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVL 355
Query: 318 GWEPKIKLRDGLPLMEDDFRLRLAVP 343
           GW+PK    +   +ME  ++ +   P
Sbjct: 356 GWKPKYDTLEA--IMETSWKFQRTHP 379

>pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 138/325 (42%), Gaps = 44/325 (13%)
Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
           +FQS MRILVTGG+G +G   + K++ +    +   D  F  SKD           +L  
Sbjct: 4   YFQS-MRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTD 50
Query: 88  HDVTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
              T  L  +V    + HLA     +F   KYN +   + NV    N+L  A  VGAR +
Sbjct: 51  TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKV 109
Query: 144 LTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ++  S  ++ D   +P DE+   N  P      Y   KR+ +     Y +Q+G       
Sbjct: 110 VSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 203 IFNTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
             N +GP    NI+DG V+   I +       G  LTV   G   R F Y  D+    I 
Sbjct: 170 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 229
Query: 257 LM-EGENTGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA 313
           ++ E     PI  ++G   E ++ E AE V E ++ + E+T  + T  D + +K      
Sbjct: 230 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF-DTTKSDGQFKKT----- 283
Query: 314 TELLGWEPKIKLRDGLPLMEDDFRL 338
                     KLR  LP    DFR 
Sbjct: 284 ------ASNSKLRTYLP----DFRF 298

>pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 138/325 (42%), Gaps = 44/325 (13%)
Query: 28  FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR 87
           +FQS MRILVTGG+G +G   + K++ +    +   D  F  SKD           +L  
Sbjct: 3   YFQS-MRILVTGGSGLVGK-AIQKVVADGAG-LPGEDWVFVSSKDA----------DLTD 49
Query: 88  HDVTEPLLIEVD--QIYHLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGARIL 143
              T  L  +V    + HLA     +F   KYN +   + NV    N+L  A  VGAR +
Sbjct: 50  TAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVGARKV 108
Query: 144 LTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ++  S  ++ D   +P DE+   N  P      Y   KR+ +     Y +Q+G       
Sbjct: 109 VSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 168
Query: 203 IFNTYGPR--MNIDDGRVVSNFIAQA----IRGEPLTVQAPGTQTRSFCYVSDMVDGLIR 256
             N +GP    NI+DG V+   I +       G  LTV   G   R F Y  D+    I 
Sbjct: 169 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIW 228
Query: 257 LMEGEN-TGPI--NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA 313
           ++   N   PI  ++G   E ++ E AE V E ++ + E+T  + T  D + +K      
Sbjct: 229 VLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTF-DTTKSDGQFKKT----- 282
Query: 314 TELLGWEPKIKLRDGLPLMEDDFRL 338
                     KLR  LP    DFR 
Sbjct: 283 ------ASNSKLRTYLP----DFRF 297

>pdb|1KVS|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +ST+ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSTATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|2UDP|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1LRJ|A Chain A, Crystal Structure Of E. Coli Udp-Galactose 4-Epimerase Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1KVR|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDQPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1LRK|A Chain A, Crystal Structure Of Escherichia Coli Udp-Galactose 4-Epimerase Mutant Y299c Complexed With Udp-N-Acetylglucosamine Length = 338

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPACWADASKADRELNW 312

>pdb|1KVQ|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1KVT|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S Y + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSVATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|2PZK|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmg In Complex With Nad Length = 330

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 29/306 (9%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MRIL+TGGAG +GS+L++  +  + +E++V+DN+ TG ++ L    G     +I   V
Sbjct: 19  SHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDNFATGKREVLPPVAG---LSVIEGSV 74
Query: 91  TEPLLIE--VDQIYHLACPASPIFYKYNP---VKTIKTNVIGTLNMLGLAKRVGARILLT 145
           T+  L+E   D         S   YK +P    +   TNV G++N+   A + G + LL 
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYK-DPDDWAEDAATNVQGSINVAKAASKAGVKRLLN 133
Query: 146 -STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
             T+  YG P   P         +P    + Y   K   E  +        + +   R+ 
Sbjct: 134 FQTALCYGRPATVPIPID-----SPTAPFTSYGISKTAGEAFLM----MSDVPVVSLRLA 184
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD-GLIRLMEGENT 263
           N  GPR+ I     +  F  +   G+           R F  +SD +    + L EG  T
Sbjct: 185 NVTGPRLAIGP---IPTFYKRLKAGQKCFCS---DTVRDFLDMSDFLAIADLSLQEGRPT 238
Query: 264 GPINIGNPGEFTMLELAENVKELINPNVE--ITMVENTPDDPRQRKPDITKATELLGWEP 321
           G  N+      ++ E+ + V + +   +   + +V    DD      D +K     GW+ 
Sbjct: 239 GVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTETEFGWKA 298
Query: 322 KIKLRD 327
           K+  +D
Sbjct: 299 KVDFKD 304

>pdb|1KVU|A Chain A, Udp-Galactose 4-Epimerase Complexed With Udp-Phenol Length = 338

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 137/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S++ VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSSATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1A9Y|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Glucose Length = 338

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDQPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|1A9Z|A Chain A, Udp-Galactose 4-Epimerase Mutant S124aY149F COMPLEXED WITH UDP- Galactose Length = 338

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRH 88
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L    R    HP F  +  
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTF--VEG 57
Query: 89  DV-TEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
           D+  E L+ E      +D + H A   +       P++    NV GTL ++   +    +
Sbjct: 58  DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 142 -ILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRVAETLMFDYHR-QHGIEI 198
             + +S + VYGD    P  ES+     P G  +S + + K + E ++ D  + Q    I
Sbjct: 118 NFIFSSAATVYGDNPKIPYVESF-----PTGTPQSPFGKSKLMVEQILTDLQKAQPDWSI 172
Query: 199 RIARIFNTYGPRMNIDDGR----VVSN---FIAQAIRG--EPLTV------QAPGTQTRS 243
            + R FN  G   + D G     + +N   +IAQ   G  + L +         GT  R 
Sbjct: 173 ALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD 232
Query: 244 FCYVSDMVDGLIRLMEGENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           + +V D+ DG +  ME     P     N+G     ++L++     +     V        
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRR 292
Query: 300 PDDPRQRKPDITKATELLGW 319
             D      D +KA   L W
Sbjct: 293 EGDLPAYWADASKADRELNW 312

>pdb|3M2P|A Chain A, The Crystal Structure Of Udp-N-Acetylglucosamine 4-Epimerase From Bacillus Cereus Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 119/297 (40%), Gaps = 33/297 (11%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR---FELIRHD 89
           ++I VTGG GF+G ++V+ + +N+ N  I+           L + IG+     +E    D
Sbjct: 3   LKIAVTGGTGFLGQYVVESI-KNDGNTPII-----------LTRSIGNKAINDYEYRVSD 50
Query: 90  VTEPLLI----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
            T   LI    +VD + HLA            +     N I T N+         + I+ 
Sbjct: 51  YTLEDLINQLNDVDAVVHLAATRGS----QGKISEFHDNEILTQNLYDACYENNISNIVY 106
Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
            ST   Y D    P +E       P+     Y   K   E +   Y R+ G+ I+  R  
Sbjct: 107 ASTISAYSDETSLPWNEKEL----PLP-DLXYGVSKLACEHIGNIYSRKKGLCIKNLRFA 161
Query: 205 NTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T 263
           + YG   N  +   ++ F  QA  GE LT+ A     R F Y  D    +I  ++ E  +
Sbjct: 162 HLYG--FNEKNNYXINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS 219
Query: 264 GPINIGNPGEFTMLELAENVKELI-NPNVEITMVENTPDDPRQRKPDITKATELLGW 319
           G  NIG+    T  E+A  +     N +  +    N  +       D +KA ELL +
Sbjct: 220 GTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYXDSSKAKELLDF 276

>pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 133/335 (39%), Gaps = 42/335 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A +   + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  ENT P    IN+G   + T+ ELA+ + +++     +    + PD   ++  D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +T+  + LGW  +I L  GL       +E+  R R
Sbjct: 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 132/335 (39%), Gaps = 42/335 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  ENT P    IN+G   + T+ ELA+ + +++     +    + PD   ++  D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +T+  + LGW  +I L  GL       +E+  R R
Sbjct: 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 132/335 (39%), Gaps = 42/335 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   +     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIARIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  ENT P    IN+G   + T+ ELA+ + +++     +    + PD   ++  D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +T+  + LGW  +I L  GL       +E+  R R
Sbjct: 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 132/335 (39%), Gaps = 42/335 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  ENT P    IN+G   + T+ +LA+ + +++     +    + PD   ++  D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRDLAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +T+  + LGW  +I L  GL       +E+  R R
Sbjct: 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 42/335 (12%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L    S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGAS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
            +Y      P  ES    G + P      Y   K     L   Y+RQ+G + R     N 
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEP--TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNL 166
Query: 207 YGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I +ME
Sbjct: 167 YGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASIHVME 226
Query: 260 G------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  ENT P    IN+G   + T+ ELA+ + +++     +    + PD   ++  D
Sbjct: 227 LAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLD 286
Query: 310 ITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +T+  + LGW  +I L  GL       +E+  R R
Sbjct: 287 VTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 50/339 (14%)
Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S  R+ + G  G +GS +  +L +    E+++       ++D L         +    + 
Sbjct: 2   SKQRVFIAGHRGMVGSAIRRQLEQRGDVELVL------RTRDELNLLDSRAVHDFFASE- 54
Query: 91  TEPLLIEVDQIYHLACPASPIFYKYN-PVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                  +DQ+Y  A     I      P   I  N++   N++  A +    ++L   +S
Sbjct: 55  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 108
Query: 149 EVYGDPLVHPQDES--YWGNVNPIGVRSCYDEGKRVAE----TLMFDYHRQHGIEIRIAR 202
            +Y      P  ES    G + P       +E + +A+     L   Y+RQ+G + R   
Sbjct: 109 CIYPKLAKQPMAESELLQGTLEPT------NEPEAIAKIAGIKLCESYNRQYGRDYRSVM 162
Query: 203 IFNTYGPRMNI--DDGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI 255
             N YGP  N    +  V+   +     A A     + V   GT  R F +V DM    I
Sbjct: 163 PTNLYGPHDNFHPSNSHVIPALLRRFHEATAQSAPDVVVWGSGTPMREFLHVDDMAAASI 222
Query: 256 RLMEG------ENTGP----INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ 305
            +ME       ENT P    IN+G   + T+ ELA+ + +++     +    + PD   +
Sbjct: 223 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPR 282
Query: 306 RKPDITKATELLGWEPKIKLRDGLP-----LMEDDFRLR 339
           +  D+T+  + LGW  +I L  GL       +E+  R R
Sbjct: 283 KLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQDRFR 320

>pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 45/330 (13%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D  +   
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 196 I-EIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAIRG--EPLTV------QAPGT 239
              + + R FN  G   +    +D + + N    +++Q   G  E L V         GT
Sbjct: 177 TWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM 295
             R + +V D+  G I    +L E       N+G    +++L++ + +++     +   +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 296 VENTPDDPRQRKPDITKATELLGWEPKIKL 325
           V     D      + + A E LGW   + L
Sbjct: 297 VARREGDVAACYANPSLAQEELGWTAALGL 326

>pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 143/330 (43%), Gaps = 45/330 (13%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAMGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D  +   
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 196 I-EIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAIRG--EPLTV------QAPGT 239
              + + R FN  G   +    +D + + N    +++Q   G  E L V         GT
Sbjct: 177 TWNVVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM 295
             R + +V D+  G I    +L E       N+G    +++L++ + +++     +   +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 296 VENTPDDPRQRKPDITKATELLGWEPKIKL 325
           V     D      + + A E LGW   + L
Sbjct: 297 VARREGDVAACYANPSLAQEELGWTAALGL 326

>pdb|3ENK|A Chain A, 1.9a Crystal Structure Of Udp-Glucose 4-Epimerase From Burkholderia Pseudomallei Length = 341

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 141/348 (40%), Gaps = 55/348 (15%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTGGAG+IGSH   +L+ +   +V++ DN     ++ +       R E I      P 
Sbjct: 8   ILVTGGAGYIGSHTAVELLAH-GYDVVIADNLVNSKREAI------ARIEKITGKT--PA 58
Query: 95  LIEVDQIYHLACP----ASPI--FYKYNPVKTIKTNVIGTLNMLG------------LAK 136
             E D     A      A PI     +  +K +  +V   +                + +
Sbjct: 59  FHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE 118
Query: 137 RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-G 195
           R   RI+ +S++ VYG P   P DE++     P+   + Y + K +AE ++ D       
Sbjct: 119 RAVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEAADPS 173
Query: 196 IEIRIARIFNTYGPR----MNIDDGRVVSN---FIAQAIRG--EPLTVQAP------GTQ 240
             +   R FN  G      +  D   + +N   ++AQ   G  E L V         GT 
Sbjct: 174 WRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTG 233
Query: 241 TRSFCYVSDMVDGLIRLMEG----ENTGPINIGNPGEFTMLELAENVKELINPNVEITMV 296
            R + +V D+  G I  ++     + +  +N+G    +++LE+    ++     V   +V
Sbjct: 234 VRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELV 293
Query: 297 ENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPR 344
              P D  +   +   A E +GW+ +   RD   +  D +R +   PR
Sbjct: 294 ARRPGDVAECYANPAAAAETIGWKAE---RDLERMCADHWRWQENNPR 338

>pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 48/348 (13%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY---FTGSK---DNLRK-------WIGH 80
           ++LVTGGAG+IGSH V +L+E     V V+DN+   F G     ++LR+        +  
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPV-VIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 81  PRFELIRHDVTEPLLIEVD--QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              +++     + L  +     + H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 139 GAR-ILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
           G + ++ +S++ VYG+P   P DE++   G  NP      Y + K   E ++ D  +   
Sbjct: 123 GVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP------YGKSKFFIEEMIRDLCQADK 176
Query: 196 I-EIRIARIFNTYGPRMN---IDDGRVVSN----FIAQAIRG--EPLTV------QAPGT 239
                + R FN  G   +    +D + + N    +++Q   G  E L V         GT
Sbjct: 177 TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236
Query: 240 QTRSFCYVSDMVDGLI----RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM 295
             R + +V D+  G I    +L E       N+G    +++L++ + +++     +   +
Sbjct: 237 GVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKV 296
Query: 296 VENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVP 343
           V     D      + + A E LGW   + L     + ED +R +   P
Sbjct: 297 VARREGDVAACYANPSLAQEELGWTAALGLDR---MCEDLWRWQKQNP 341

>pdb|2Q1W|A Chain A, Crystal Structure Of The Bordetella Bronchiseptica Enzyme Wbmh In Complex With Nad+ Length = 333

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 119/283 (42%), Gaps = 38/283 (13%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           ++ +TG  G IGSH+ + L+E   ++V+ +DN+ TG +++L+    HP    +   + + 
Sbjct: 23  KVFITGICGQIGSHIAELLLE-RGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADH 78
Query: 94  LLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILL 144
            L+       + D + H A         YN      TN +G  N++  AK+  VG R + 
Sbjct: 79  ALVNQLIGDLQPDAVVHTAASYKDPDDWYN---DTLTNCVGGSNVVQAAKKNNVG-RFVY 134
Query: 145 TSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             T+  YG  P+  P    +  N       S Y   K   E    DY    G++    R+
Sbjct: 135 FQTALCYGVKPIQQPVRLDHPRNP----ANSSYAISKSANE----DYLEYSGLDFVTFRL 186
Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
            N  GPR N+     +  F  +   G+   V       R F +V D+    +R ++G   
Sbjct: 187 ANVVGPR-NVSGPLPI--FFQRLSEGKKCFVT---KARRDFVFVKDLARATVRAVDGVGH 240
Query: 264 GPINIGNPGEFTMLELAENVKELIN----PNVEITMVENTPDD 302
           G  +  +  +  + EL + V E +     P  EI   E  PDD
Sbjct: 241 GAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIR--ELGPDD 281

>pdb|1WVG|A Chain A, Structure Of Cdp-D-Glucose 4,6-Dehydratase From Salmonella Typhi Length = 359

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 139/348 (39%), Gaps = 70/348 (20%)
Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------------KDNL 74
           K F    R+ VTG  GF GS L   L E       +V  Y   +             D +
Sbjct: 4   KNFWQGKRVFVTGHTGFKGSWLSLWLTEMGA----IVKGYALDAPTVPSLFEIVRLNDLM 59
Query: 75  RKWIGHPR-FELIRHDVTEPLLIEVDQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNML 132
              IG  R FE +R  + E    + + ++H+A  P   + Y+  P+KT  TNV+GT+++L
Sbjct: 60  ESHIGDIRDFEKLRSSIAE---FKPEIVFHMAAQPLVRLSYE-QPIKTYSTNVMGTVHLL 115
Query: 133 GLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFD 189
              K+VG  + ++  TS+   D       E  WG     P+G    Y   K  AE +   
Sbjct: 116 ETVKQVGNIKAVVNITSDKCYD-----NREWVWGYRENEPMGGYDPYSNSKGCAELVASA 170
Query: 190 Y---------HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ 240
           +         + QHG+ +   R  N  G      D R++ + +      + + ++ P   
Sbjct: 171 FRNSFFNPANYEQHGVGLASVRAGNVIGGGDWAKD-RLIPDILRSFENNQQVIIRNP-YS 228
Query: 241 TRSFCYVSDMVDGLI-----------RLMEGENTGPINIGNPGEFTMLELAENVKELINP 289
            R + +V + + G I           +  EG N GP +          E A+ V+ +++ 
Sbjct: 229 IRPWQHVLEPLSGYIVVAQRLYTEGAKFSEGWNFGPRD----------EDAKTVEFIVDK 278
Query: 290 NVEITM--------VENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
            V +           EN P +    K D +KA   LGW P+  L + L
Sbjct: 279 MVTLWGDDASWLLDGENHPHEAHYLKLDCSKANMQLGWHPRWGLTETL 326

>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 137/333 (41%), Gaps = 47/333 (14%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-------RKWIGHPRFELIR 87
           +LVTGGAG+IGSH V +L+EN   + +V DN    + D++       +  I     +L  
Sbjct: 14  VLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 72
Query: 88  HDVTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILL 144
               E +  E  +D + H A   +       P++    N++GT+ +L L ++   ++ + 
Sbjct: 73  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 132
Query: 145 TSTSEVYGDPLVHPQ-----DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIE 197
           +S++ VYGD    P      +E   G  NP      Y   K   E ++ D +   +   +
Sbjct: 133 SSSATVYGDATRFPNMIPIPEECPLGPTNP------YGHTKYAIENILNDLYNSDKKSWK 186
Query: 198 IRIARIFNTYGPR---MNIDDGRVVSN----FIAQAIRG--EPLTV------QAPGTQTR 242
             I R FN  G     +  +D   + N    ++AQ   G  E L +         GT  R
Sbjct: 187 FAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIR 246
Query: 243 SFCYVSDMVDGLIRLME-----GENTGPI---NIGNPGEFTMLELAENVKELINPNVEIT 294
            + +V D+  G I  ++      EN G     N+G+    T+ E+     +    ++   
Sbjct: 247 DYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYK 306
Query: 295 MVENTPDDPRQRKPDITKATELLGWEPKIKLRD 327
           +      D         +A   L W+ ++++ D
Sbjct: 307 VTGRRAGDVLNLTAKPDRAKRELKWQTELQVED 339

>pdb|1DB3|A Chain A, E.Coli Gdp-Mannose 4,6-Dehydratase Length = 372

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 142/352 (40%), Gaps = 66/352 (18%)
Query: 36  LVTGGAGFIGSHLVDKLMENEKNEVIVV----DNYFTGSKDNLRK--WIGHPRFELIRHD 89
           L+TG  G  GS+L + L+E +  EV  +     ++ T   D++ +     +P+F L   D
Sbjct: 5   LITGVTGQDGSYLAEFLLE-KGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63
Query: 90  VTEP-----LLIEV--DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNM------LGLAK 136
           +++      +L EV  D++Y+L   +       +P  T   + +GTL +      LGL K
Sbjct: 64  LSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEK 123
Query: 137 RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
           +   R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+
Sbjct: 124 KT--RFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGM 176
Query: 197 EIRIARIFNTYGPR-----MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
                 +FN   PR     +     R ++N IAQ +  E           R + +  D V
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIAN-IAQGL--ESCLYLGNMDSLRDWGHAKDYV 233
Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKEL--INPNVEITMVE-----------N 298
                +++ E      I    ++++ +  E       I    E T VE           +
Sbjct: 234 KMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHD 293
Query: 299 TPD----------DPRQRKP--------DITKATELLGWEPKIKLRDGLPLM 332
            P           DPR  +P        D TKA E LGW+P+I LR+ +  M
Sbjct: 294 APGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEM 345

>pdb|2X6T|A Chain A, Agme Bound To Adp-B-Mannose Length = 357

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 102/251 (40%), Gaps = 32/251 (12%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------NLRKWIGHPRFELIRH 88
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K       N+  ++    F LI+ 
Sbjct: 49  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 107
Query: 89  DVTEPLLIEVDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
              E    +V+ I+H  AC ++    +++    +  N   +  +L          L  S+
Sbjct: 108 MAGEEFG-DVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 163
Query: 148 SEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQ----HGIEIRIA 201
           +  YG       +   Y   +N  G               +FD Y RQ       +I   
Sbjct: 164 AATYGGRTSDFIESREYEKPLNVFGYSK-----------FLFDEYVRQILPEANSQIVGF 212
Query: 202 RIFNTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           R FN YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +
Sbjct: 213 RYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL 272
Query: 259 EGENTGPINIG 269
           E   +G  N+G
Sbjct: 273 ENGVSGIFNLG 283

>pdb|1EQ2|A Chain A, The Crystal Structure Of Adp-L-Glycero-D-Mannoheptose 6- Epimerase Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 30/250 (12%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------NLRKWIGHPRFELIRH 88
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K       N+  ++    F LI+ 
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDF-LIQI 60
Query: 89  DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
              E    +V+ I+H    +S    +++    +  N   +  +L          L  S++
Sbjct: 61  MAGEEFG-DVEAIFHEGAXSSTT--EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSA 117
Query: 149 EVYGDPLV-HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD-YHRQ----HGIEIRIAR 202
             YG       +   Y   +N  G               +FD Y RQ       +I   R
Sbjct: 118 ATYGGRTSDFIESREYEKPLNVYGYSK-----------FLFDEYVRQILPEANSQIVGFR 166
Query: 203 IFNTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
            FN YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +E
Sbjct: 167 YFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLE 226
Query: 260 GENTGPINIG 269
              +G  N+G
Sbjct: 227 NGVSGIFNLG 236

>pdb|1T2A|A Chain A, Crystal Structure Of Human Gdp-D-Mannose 4,6-Dehydratase Length = 375

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 140/348 (40%), Gaps = 55/348 (15%)
Query: 24  RFSKFFQSNMR--ILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYF-TGSKDNLRKWI 78
           R +K+FQ +MR   L+TG  G  GS+L + L+E   E + ++   + F TG  ++L K  
Sbjct: 14  RENKYFQGHMRNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYK-- 71
Query: 79  GHPR------FELIRHDVTEP-LLIEV------DQIYHLACPASPIFYKYNPVKTIKTNV 125
            +P+       +L   D+T+   L+++       +IY+L   +           T   + 
Sbjct: 72  -NPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDG 130
Query: 126 IGTLNMLGLAKRVG----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR 181
           +GTL +L   K  G     +    STSE+YG     PQ E+      P   RS Y   K 
Sbjct: 131 VGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKL 185
Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGT- 239
            A  ++ ++   + +      +FN   PR   +   R +S  +A+   G+ L   + G  
Sbjct: 186 YAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQ-LECFSLGNL 244
Query: 240 -QTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAEN---------------- 282
              R + +  D V+ +  +++ +      I      ++ E  E                 
Sbjct: 245 DAKRDWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNE 304
Query: 283 -----VKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKL 325
                 KE    +V + +    P +    + D TKA + L W+P++  
Sbjct: 305 NEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAF 352

>pdb|3A1N|A Chain A, Crystal Structure Of L-Threonine Dehydrogenase From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 137/336 (40%), Gaps = 46/336 (13%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG +G IG+ LV  L E    + ++       + D +++  G  +F  I  DV+   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVI-------ASDIVQRDTGGIKF--ITLDVSNRD 52
Query: 95  LIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARILLT 145
            I+       +D I+HLA   S    K +P    K N+ GT N+L  AK  RV  ++++ 
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKGEK-DPALAYKVNMNGTYNILEAAKQHRV-EKVVIP 110
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGV---RSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ST  V+G        E+    V  I +   R+ Y   K  AE L   Y+ + G+++R  R
Sbjct: 111 STIGVFG-------PETPKNKVPSITITRPRTMYGVTKIAAELLGQYYYEKFGLDVRSLR 163
Query: 203 ----IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
               I     P     D  V       A++ E         +     Y+ D +  L+ L 
Sbjct: 164 YPGIISYKAEPTAGTTDYAV--EIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLY 221
Query: 259 EGENTGPI-----NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP---DI 310
           E +    +     N+     FT  EL   +KE I P  EI   E+  D      P   D 
Sbjct: 222 EADRDKLVLRNGYNV-TAYTFTPSELYSKIKERI-PEFEIEYKEDFRDKIAATWPESLDS 279
Query: 311 TKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           ++A+   G+  +  L   +  M D    +L +  K+
Sbjct: 280 SEASNEWGFSIEYDLDRTIDDMIDHISEKLGIEGKH 315

>pdb|1RKX|A Chain A, Crystal Structure At 1.8 Angstrom Of Cdp-D-Glucose 4,6- Dehydratase From Yersinia Pseudotuberculosis Length = 357

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 131/340 (38%), Gaps = 58/340 (17%)
Query: 29  FQSNMRILVTGGAGFIGSHL------VDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGH 80
           F    R+ VTG  GF G  L      +   ++        V + F  ++  D ++  IG 
Sbjct: 6   FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGD 65
Query: 81  PR-----FELIRHDVTEPLLIEVDQIYHLAC-PASPIFYKYNPVKTIKTNVIGTLNMLGL 134
            R      E IR         + + ++H+A  P   + Y   PV+T  TNV+GT+ +L  
Sbjct: 66  IRDQNKLLESIRE-------FQPEIVFHMAAQPLVRLSYS-EPVETYSTNVMGTVYLLEA 117
Query: 135 AKRVGA-RILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAETLMFDY- 190
            + VG  + ++  TS+       +   E  WG      +G    Y   K  AE +   Y 
Sbjct: 118 IRHVGGVKAVVNITSDK-----CYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYR 172
Query: 191 --------HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 242
                   + QHG  +   R  N  G      D R+V + +    + +P+ ++ P    R
Sbjct: 173 NSFFNPANYGQHGTAVATVRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIRNPHA-IR 230
Query: 243 SFCYVSDMVDGLIRL-----------MEGENTGPINIGNPGEFTMLE-LAENVKELINPN 290
            + +V + + G + L            EG N GP    N  + T ++ + E + +     
Sbjct: 231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGP----NDADATPVKNIVEQMVKYWGEG 286
Query: 291 VEITMVENT-PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
               +  N  P +    K D +KA   LGW P+  L   L
Sbjct: 287 ASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTL 326

>pdb|2GN4|A Chain A, Crystal Structure Of Udp-Glcnac Inverting 4,6-Dehydratase In Complex With Nadph And Udp-Glcnac Length = 344

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N  IL+TGG G  G   V K+++    + I+V +     +  +      PR      DV 
Sbjct: 21  NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVR 80
Query: 92  EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           +       L  VD   H A        +YNP++ IKTN++G  N++    +     ++  
Sbjct: 81  DLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIAL 140
Query: 147 TSEVYGDPL 155
           +++   +P+
Sbjct: 141 STDKAANPI 149

>pdb|3SC6|A Chain A, 2.65 Angstrom Resolution Crystal Structure Of Dtdp-4-Dehydrorhamnose Reductase (Rfbd) From Bacillus Anthracis Str. Ames In Complex With Nadp Length = 287

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEVY-GDPLVHPQDESYWGNVNPIGVRSCYDEGKRV 182
           N IG  N+   ++ VGA+++  ST  V+ GD    P+    + N  PI +   Y   K  
Sbjct: 83  NAIGARNVAVASQLVGAKLVYISTDYVFQGD---RPEGYDEFHNPAPINI---YGASKYA 136
Query: 183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPGTQ 240
            E  + + H ++ I +R + ++  YG           +NF+   IR   E   +     Q
Sbjct: 137 GEQFVKELHNKYFI-VRTSWLYGKYG-----------NNFVKTMIRLGKEREEISVVADQ 184
Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEI 293
             S  YV+D+   + +L+     G  ++ N G  +  E A+ +    N  V +
Sbjct: 185 IGSPTYVADLNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKVNV 237

>pdb|3A9W|A Chain A, Crystal Structure Of L-Threonine Bound L-Threonine Dehydrogenase (Y137f) From Hyperthermophilic Archaeon Thermoplasma Volcanium Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 137/336 (40%), Gaps = 46/336 (13%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG +G IG+ LV  L E    + ++       + D +++  G  +F  I  DV+   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVI-------ASDIVQRDTGGIKF--ITLDVSNRD 52
Query: 95  LIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK--RVGARILLT 145
            I+       +D I+HLA   S    K +P    K N+ GT N+L  AK  RV  ++++ 
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKGEK-DPALAYKVNMNGTYNILEAAKQHRV-EKVVIP 110
Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGV---RSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           ST  V+G        E+    V  I +   R+ +   K  AE L   Y+ + G+++R  R
Sbjct: 111 STIGVFG-------PETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLR 163
Query: 203 ----IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
               I     P     D  V       A++ E         +     Y+ D +  L+ L 
Sbjct: 164 YPGIISYKAEPTAGTTDYAV--EIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLY 221
Query: 259 EGENTGPI-----NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP---DI 310
           E +    +     N+     FT  EL   +KE I P  EI   E+  D      P   D 
Sbjct: 222 EADRDKLVLRNGYNV-TAYTFTPSELYSKIKERI-PEFEIEYKEDFRDKIAATWPESLDS 279
Query: 311 TKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           ++A+   G+  +  L   +  M D    +L +  K+
Sbjct: 280 SEASNEWGFSIEYDLDRTIDDMIDHISEKLGIEGKH 315

>pdb|2ZKL|A Chain A, Crystal Structure Of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus Length = 369

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 48/231 (20%)
Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M I++TG  GF+G +L                      K +L     H  FE+ R    E
Sbjct: 1   MNIVITGAKGFVGKNL----------------------KADLTSTTDHHIFEVHRQTKEE 38
Query: 93  PL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE 149
            L   L++ D I HLA    P   K   +  + + +   L++L    +  A ILL+S+ +
Sbjct: 39  ELESALLKADFIVHLAGVNRPEHDKEFSLGNV-SYLDHVLDILTRNTKKPA-ILLSSSIQ 96
Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
              D              NP G      E K   E L+ +Y  ++G  + I R  N +G 
Sbjct: 97  ATQD--------------NPYG------ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGK 136
Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
               +   V++ F  +  R E + V     +  +  YV D+V  + R +EG
Sbjct: 137 WCKPNYNSVIATFCYKIARNEEIQVNDRNVEL-TLNYVDDIVAEIKRAIEG 186

>pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph And Gdp-rhamnose. Length = 381

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 103/283 (36%), Gaps = 49/283 (17%)
Query: 73  NLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNML 132
           +LR+WI          DV +P     D++Y+LA  +        P  T      G L +L
Sbjct: 97  SLRRWI----------DVIKP-----DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLL 141
Query: 133 GLAKR------VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL 186
              +          +     +SE++G     PQ E+      P   RS Y   K  A   
Sbjct: 142 EAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSET-----TPFHPRSPYAASKCAAHWY 195
Query: 187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC- 245
             +Y   +G+      +FN   PR          NF+ + I    L     G QT+ F  
Sbjct: 196 TVNYREAYGLFACNGILFNHESPRRG-------ENFVTRKIT-RALGRIKVGLQTKLFLG 247
Query: 246 ---------YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPN----VE 292
                    +  D V+ +  +++ E      +      T+ E  +     +  N    VE
Sbjct: 248 NLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE 307
Query: 293 ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD 335
           I      P +    + D +KA E+LGW+P++     + +M D+
Sbjct: 308 IDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDE 350

>pdb|1I2B|A Chain A, Crystal Structure Of Mutant T145a Sqd1 Protein Complex With Nad And Udp-SulfoquinovoseUDP-Glucose Length = 404

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 111/305 (36%), Gaps = 77/305 (25%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 13  RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 70
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 71  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 129
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEV--YGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L     +  YG P                   L +P+  S
Sbjct: 130 NVIGTLNVLFAIKEFGEECHLVKLGAMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 246
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP---G 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  +           I I NP   G
Sbjct: 247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV----------EIAIANPAKAG 296
Query: 273 EFTML 277
           EF + 
Sbjct: 297 EFRVF 301

>pdb|1QRR|A Chain A, Crystal Structure Of Sqd1 Protein Complex With Nad And Udp- Glucose Length = 394

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 116/311 (37%), Gaps = 67/311 (21%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 3   RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 119
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEV--YGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L     +  YG P                   L +P+  S
Sbjct: 120 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 179
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 180 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 236
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL-IRLMEGENTGPINIGN--PG 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  + I +      G   + N    
Sbjct: 237 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTE 296
Query: 273 EFTMLELAENV 283
           +F++ ELA  V
Sbjct: 297 QFSVNELASLV 307

>pdb|1I24|A Chain A, High Resolution Crystal Structure Of The Wild-Type Protein Sqd1, With Nad And Udp-Glucose Length = 404

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 111/305 (36%), Gaps = 77/305 (25%)
Query: 34  RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY----------------FTGSKDNLRK 76
           R++V GG G+ G      L  ++KN EV +VDN                      D + +
Sbjct: 13  RVMVIGGDGYCG--WATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 70
Query: 77  W--IGHPRFELIRHDVTEPLLI-------EVDQIYHL----ACPASPIFYKYNPVKTIKT 123
           W  +     EL   D+ +   +       E D + H     + P S I  +   V T   
Sbjct: 71  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMI-DRSRAVYTQHN 129
Query: 124 NVIGTLNMLGLAKRVGARILLTSTSEV--YGDP-------------------LVHPQDES 162
           NVIGTLN+L   K  G    L     +  YG P                   L +P+  S
Sbjct: 130 NVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQAS 189
Query: 163 YWGNVNPIG-----VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-- 215
            + +++ +        +C   G R  +    +    +G++     +      R++ D   
Sbjct: 190 SFYHLSKVHDSHNIAFTCKAWGIRATD---LNQGVVYGVKTDETEMHEELRNRLDYDAVF 246
Query: 216 GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP---G 272
           G  ++ F  QA  G PLTV   G QTR +  + D V  +           I I NP   G
Sbjct: 247 GTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV----------EIAIANPAKAG 296
Query: 273 EFTML 277
           EF + 
Sbjct: 297 EFRVF 301

>pdb|3ST7|A Chain A, Crystal Structure Of Capsular Polysaccharide Assembling Protein Capf From Staphylococcus Aureus Length = 369

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 48/229 (20%)
Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I++TG  GF+G +L                      K +L     H  FE+ R    E L
Sbjct: 3   IVITGAKGFVGKNL----------------------KADLTSTTDHHIFEVHRQTKEEEL 40
Query: 95  ---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY 151
              L++ D I HLA    P   K   +  + + +   L++L    +  A ILL+S+ +  
Sbjct: 41  ESALLKADFIVHLAGVNRPEHDKEFSLGNV-SYLDHVLDILTRNTKKPA-ILLSSSIQAT 98
Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
            D              NP G      E K   E L+ +Y  ++G  + I R  N +G   
Sbjct: 99  QD--------------NPYG------ESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWC 138
Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
             +   V++ F  +  R E + V     +  +  YV D+V  + R +EG
Sbjct: 139 KPNYNSVIATFCYKIARNEEIQVNDRNVEL-TLNYVDDIVAEIKRAIEG 186

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	346
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	0.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	0.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	1e-177
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	1e-173
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	1e-161
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	1e-138
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-116
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	4e-91
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	4e-85
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	2e-82
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	3e-82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	2e-79
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	2e-74
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	3e-73
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	4e-70
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	8e-70
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	2e-69
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	3e-69
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	2e-65
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	2e-64
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	9e-62
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	8e-59
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	9e-52
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	2e-46
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-45
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	8e-39
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	9e-38
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-37
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	5e-34
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	2e-31
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	3e-31
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-30
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	4e-29
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	4e-23
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	1e-21
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	3e-20
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	6e-20
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	8e-20
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	1e-18
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	2e-18
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	3e-18
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	9e-18
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	2e-17
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	2e-17
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	6e-17
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	4e-15
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	7e-15
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-14
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	4e-11
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	2e-10
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-08
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	8e-08
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	8e-07
1xq6_A	253	Unknown protein; structural genomics, protein stru	7e-06
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	8e-06
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	8e-06
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	9e-06
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	2e-05
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	4e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	4e-05
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	5e-05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	6e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	6e-05
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	1e-04
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	1e-04
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-04
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	2e-04
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	3e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	5e-04
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	8e-04

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score =  575 bits (1483), Expect = 0.0
 Identities = 203/341 (59%), Positives = 248/341 (72%), Gaps = 4/341 (1%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
           S+ +H+ +S            K      RIL+TGGAGF+GSHL DKLM  + +EV VVDN
Sbjct: 4   SHHHHHHSSGRENLYFQGHMEK---DRKRILITGGAGFVGSHLTDKLMM-DGHEVTVVDN 59

Query: 66  YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125
           +FTG K N+  WIGH  FELI HDV EPL IEVDQIYHLA PASP  Y YNP+KT+KTN 
Sbjct: 60  FFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNT 119

Query: 126 IGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET 185
           IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET
Sbjct: 120 IGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 179

Query: 186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
           + + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV   G+QTR+F 
Sbjct: 180 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ 239

Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ 305
           YVSD+V+GL+ LM    + P+N+GNP E T+LE A+ +K L+    EI  +    DDP++
Sbjct: 240 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQK 299

Query: 306 RKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRKN 346
           RKPDI KA  +LGWEP + L +GL      FR  L     N
Sbjct: 300 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANN 340

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score =  507 bits (1307), Expect = 0.0
 Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 38/347 (10%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 147 TSEVYGDPLVHPQDESYWG-NVNPIGV-RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +    V P+   R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 205 NTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236

Query: 259 EGE----NTGPINIGNP-GEFTMLELAENVKELINPNVEITMVENTP------------- 300
           E      +   INIGNP  E ++ EL E +      +                       
Sbjct: 237 ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK 296

Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
              D   RKP I  A   L WEPKI +++ +    D F   + +  K
Sbjct: 297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDK 343

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score =  495 bits (1276), Expect = e-177
 Identities = 87/347 (25%), Positives = 149/347 (42%), Gaps = 16/347 (4%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFF-QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD 64
           + G  N       T   L   +++   N++I +TG  GFI SH+  +L   E + VI  D
Sbjct: 2   AMGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKH-EGHYVIASD 60

Query: 65  NYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLACPASPI-FYKYNPVKT 120
                  +++ + +    F L+   V E    +   VD +++LA     + F + N    
Sbjct: 61  ---WKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVI 117

Query: 121 IKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESY--WGNVNPIGVRSCYD 177
           +  N + + NM+  A+  G  R    S++ +Y +              +  P   +  + 
Sbjct: 118 MYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFG 177

Query: 178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGE-PLTV 234
             K   E L   Y++  GIE RI R  N YGP      GR    + F  +A        +
Sbjct: 178 LEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEM 237

Query: 235 QAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT 294
              G QTRSF ++ + V+G++RL + +   P+NIG+    +M E+AE V       + I 
Sbjct: 238 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH 297

Query: 295 MVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA 341
            +   P+  R R  D     E LGW P ++L++GL +     + ++ 
Sbjct: 298 HIPG-PEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIE 343

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score =  486 bits (1252), Expect = e-173
 Identities = 94/376 (25%), Positives = 159/376 (42%), Gaps = 48/376 (12%)

Query: 6   SNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN 65
            + +H+  +    T  P           ++L+ G  GFIG HL  +++E   +  +   +
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMKA-----KKVLILGVNGFIGHHLSKRILE-TTDWEVFGMD 56

Query: 66  YFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVK 119
             T    +L   + H R      D+T      E  + + D I  L   A+P  Y   P++
Sbjct: 57  MQTDRLGDL---VKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLR 113

Query: 120 TIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG---DPLVHPQDESY-WGNVNPIGVRSC 175
             + +    L ++  A + G  ++  STSEVYG   D    P   +  +G +N    R  
Sbjct: 114 VFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP--RWI 171

Query: 176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRG 229
           Y   K++ + +++ Y    G+   + R FN  GP ++          RVV+ F+   +RG
Sbjct: 172 YACSKQLMDRVIWGYGM-EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRG 230

Query: 230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGP-INIGNP-GEFTMLELAENVK 284
           E +++   G+Q R+F YV D +  L++++E  N   TG   NIGNP   F++ ELA  + 
Sbjct: 231 ENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKML 290

Query: 285 EL---------------INPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           EL               +          N   D + R P I    + LGW P+    D L
Sbjct: 291 ELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDAL 350

Query: 330 PLMEDDFRLRLAVPRK 345
             + + +R  +A  R 
Sbjct: 351 RQIFEAYRGHVADARA 366

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score =  454 bits (1170), Expect = e-161
 Identities = 97/366 (26%), Positives = 157/366 (42%), Gaps = 24/366 (6%)

Query: 1   MAQEISNGNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEV 60
           M     + +H+S   P  +  P+  +    +N  ++V GGAGF+GS+LV +L+E   N+V
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQV 60

Query: 61  IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLACPASPIFYKY 115
            VVDN  +  K N+     HP        +T+  L+     E D ++HLA         +
Sbjct: 61  HVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHLATYHGNQSSIH 117

Query: 116 NPVKTIKTNVIGTLNMLGLA---KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV 172
           +P+   + N + TL +       KR+   +   +   +        +       V+    
Sbjct: 118 DPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNN 177

Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGR-----------VVSN 221
            S Y   K   E     YH+QH +    AR  N YGP   +  GR           V   
Sbjct: 178 DSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPT 237

Query: 222 FIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-GENTGPINIGNPGEFTMLELA 280
           FI +A++G PL ++  G  TR F +V D+ +GLI     G   G  NI +  E ++ +LA
Sbjct: 238 FIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLA 297

Query: 281 ENVKELINPNVEITMVENTP-DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR 339
             + E+   N E+  +   P D+  +R     KA   LG+   + + DGL    +  +  
Sbjct: 298 TKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKAN 357

Query: 340 LAVPRK 345
           LAV  +
Sbjct: 358 LAVIEQ 363

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score =  394 bits (1014), Expect = e-138
 Identities = 83/313 (26%), Positives = 135/313 (43%), Gaps = 21/313 (6%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR---KWIGHPRFELIR 87
              RIL+TGGAGFIG HL   L+     EV V+D+             K++  P  EL  
Sbjct: 6   LKHRILITGGAGFIGGHLARALVA-SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEE 64

Query: 88  HDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            D+++     V  +YHLA   S       P+  +  NV    ++L L   VG  ++++ S
Sbjct: 65  RDLSD-----VRLVYHLASHKSVPRSFKQPLDYL-DNVDSGRHLLALCTSVGVPKVVVGS 118

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE-IRIARIFN 205
           T EVYG     P  E      +P+  RS Y   K   E +   + R      + I R FN
Sbjct: 119 TCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFN 173

Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP 265
            YGP        +V    A  +    L V+  G Q R F Y++D+VD L+ L        
Sbjct: 174 VYGPGE--RPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSV 231

Query: 266 INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP-KIK 324
           +N G+    ++ ++   ++   +P  E+   +  P++  + + D    T  +G     I 
Sbjct: 232 VNFGSGQSLSVNDVIRILQAT-SPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIG 290

Query: 325 LRDGLPLMEDDFR 337
           + +G+ L  + ++
Sbjct: 291 IEEGIRLTLEWWQ 303

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score =  337 bits (868), Expect = e-116
 Identities = 101/324 (31%), Positives = 150/324 (46%), Gaps = 30/324 (9%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MRI+VTGGAGFIGSHLVDKL+E    EV+VVDN  +G ++ +     +P  EL   D+ +
Sbjct: 1   MRIVVTGGAGFIGSHLVDKLVE-LGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKD 54

Query: 93  PLL---IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS 148
                 I+ D ++H A           P+     NV+ T N+L  A++ G   ++  S+S
Sbjct: 55  YSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS 114

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            VYGD  V P  E       P    S Y   K   E +   Y R  G+     R  N  G
Sbjct: 115 TVYGDADVIPTPEEE-----PYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVG 169

Query: 209 PRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLME-----GEN 262
           PR+      V+ +FI +  R    L V   GTQ +S+ YV D V+  +   +        
Sbjct: 170 PRL---RHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP 226

Query: 263 TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD------DPRQRKPDITKATEL 316
              +N+GN     +L++A+ V E++    EI +V +TPD      D +     +TK  +L
Sbjct: 227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKL 286

Query: 317 LGWEPKIKLRDGLPLMEDDFRLRL 340
            GW P +   + +    +D    L
Sbjct: 287 TGWRPTMTSAEAVKKTAEDLAKEL 310

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score =  274 bits (702), Expect = 4e-91
 Identities = 72/314 (22%), Positives = 112/314 (35%), Gaps = 29/314 (9%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           +++I VTGG GF+G ++V+ +   + N  I++         N         +E    D T
Sbjct: 2   SLKIAVTGGTGFLGQYVVESIKN-DGNTPIILTRSIGNKAIND--------YEYRVSDYT 52

Query: 92  EPLLIE----VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLT 145
              LI     VD + HLA             +     N I T N+         + I+  
Sbjct: 53  LEDLINQLNDVDAVVHLAATRGSQ-----GKISEFHDNEILTQNLYDACYENNISNIVYA 107

Query: 146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           ST   Y D    P +E       P      Y   K   E +   Y R+ G+ I+  R  +
Sbjct: 108 STISAYSDETSLPWNEKEL--PLPD---LMYGVSKLACEHIGNIYSRKKGLCIKNLRFAH 162

Query: 206 TYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG- 264
            YG      +  +++ F  QA  GE LT+ A     R F Y  D    +I  ++ E    
Sbjct: 163 LYGFNE--KNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG 220

Query: 265 PINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKI 323
             NIG+    T  E+A  +          +    N  +       D +KA ELL +    
Sbjct: 221 TFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDY 280

Query: 324 KLRDGLPLMEDDFR 337
                +  +    R
Sbjct: 281 NFATAVEEIHLLMR 294

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score =  269 bits (689), Expect = 4e-85
 Identities = 93/351 (26%), Positives = 158/351 (45%), Gaps = 38/351 (10%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
            +   R+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  
Sbjct: 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEG 367

Query: 89  DVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI 142
           D++      E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI
Sbjct: 368 DISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRI 427

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNV-NPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           +  STSEVYG       DE +   +  P+   R  Y   K++ + +++ Y  + G++  +
Sbjct: 428 IFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTL 487

Query: 201 ARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
            R FN  GPR++      I   R ++  I   + G P+ +   G Q R F  + D ++ L
Sbjct: 488 FRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547

Query: 255 IRLMEGEN---TGPI-NIGNPG-EFTMLELAENVKELIN---------PNVEITMVENTP 300
            R++E       G I NIGNP  E ++ EL E +              P     +VE++ 
Sbjct: 548 YRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS 607

Query: 301 ------DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
                  D   RKP I  A   L WEPKI +++ +    D F   + +  K
Sbjct: 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDK 658

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score =  251 bits (644), Expect = 2e-82
 Identities = 89/318 (27%), Positives = 144/318 (45%), Gaps = 26/318 (8%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
             I+VTGGAGFIGSH+VDKL E+  NE++V+DN  +G+++ +     +    L++ D+  
Sbjct: 2   SLIVVTGGAGFIGSHVVDKLSES--NEIVVIDNLSSGNEEFV-----NEAARLVKADLAA 54

Query: 93  PLLIE----VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
             + +     ++++H+A      I  + NP +  + NV+ T  +L   ++ G  RI+ TS
Sbjct: 55  DDIKDYLKGAEEVWHIAANPDVRIGAE-NPDEIYRNNVLATYRLLEAMRKAGVSRIVFTS 113

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
           TS VYG+  V P  E Y    +PI   S Y   K   E L+  Y     ++  I R  N 
Sbjct: 114 TSTVYGEAKVIPTPEDY--PTHPI---SLYGASKLACEALIESYCHTFDMQAWIYRFANV 168

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-GENTGP 265
            G R     G +    +      E L +   G Q +S+ Y+SD VD ++  +   E    
Sbjct: 169 IGRRS--THGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNI 226

Query: 266 INIGNPGEFTMLELAENVKELINPNVEITMVENTPD---DPRQRKPDITKATELLGWEPK 322
            NIG+  +  +  +AE V E +  +              D       I K    LGW+P+
Sbjct: 227 FNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKR-LGWKPR 285

Query: 323 IKLRDGLPLMEDDFRLRL 340
               + + +   D    L
Sbjct: 286 YNSEEAVRMAVRDLVEDL 303

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score =  252 bits (647), Expect = 3e-82
 Identities = 83/343 (24%), Positives = 143/343 (41%), Gaps = 28/343 (8%)

Query: 9   NHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT 68
           +H+  S    +       +        L+TG AGFIGS+L++ L++    +V+ +DN+ T
Sbjct: 4   HHHHGSMGMMSRYEELRKELPAQPKVWLITGVAGFIGSNLLETLLK-LDQKVVGLDNFAT 62

Query: 69  GSKDNLRKW------IGHPRFELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKYNP 117
           G + NL +            F+ I+ D+            VD + H A   S      +P
Sbjct: 63  GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDP 122

Query: 118 VKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY 176
           + +  TN+ G LNML  A+          ++S  YGD    P+ E   G   P+   S Y
Sbjct: 123 ITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIG--KPL---SPY 177

Query: 177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTV 234
              K V E     + R +G      R FN +G R + +     V+  + +  I+G+ + +
Sbjct: 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYI 237

Query: 235 QAPGTQTRSFCYVSDMVDGLIRLMEGENTGP---INIGNPGEFTMLELAENVKEL----- 286
              G  +R FCY+ + V   +              NI   G  ++ +L   +++      
Sbjct: 238 NGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENG 297

Query: 287 INPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           ++ + E    +    D R    DI+KA +LLG+ PK  +  G+
Sbjct: 298 VSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGV 340

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score =  245 bits (627), Expect = 2e-79
 Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 34/309 (11%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            ++ +TG  G IGSH+ + L+E   ++V+ +DN+ TG +++L+    HP    +   + +
Sbjct: 22  KKVFITGICGQIGSHIAELLLE-RGDKVVGIDNFATGRREHLK---DHPNLTFVEGSIAD 77

Query: 93  PLLIE-------VDQIYHLACPAS-PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
             L+         D + H A     P     +      TN +G  N++  AK+    R +
Sbjct: 78  HALVNQLIGDLQPDAVVHTAASYKDP----DDWYNDTLTNCVGGSNVVQAAKKNNVGRFV 133

Query: 144 LTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
              T+  YG  P+  P    +    NP    S Y   K   E     Y    G++    R
Sbjct: 134 YFQTALCYGVKPIQQPVRLDH--PRNPA--NSSYAISKSANED----YLEYSGLDFVTFR 185

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN 262
           + N  GPR        +  F  +   G+   V       R F +V D+    +R ++G  
Sbjct: 186 LANVVGPRNVSG---PLPIFFQRLSEGKKCFV---TKARRDFVFVKDLARATVRAVDGVG 239

Query: 263 TGPINIGNPGEFTMLELAENVKEL--INPNVEITMVENTPDDPRQRKPDITKATELLGWE 320
            G  +  +  +  + EL + V E   +    E  + E  PDD      D ++  +  G  
Sbjct: 240 HGAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDFGKI 299

Query: 321 PKIKLRDGL 329
               L++ +
Sbjct: 300 EFTPLKETV 308

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score =  232 bits (595), Expect = 2e-74
 Identities = 93/325 (28%), Positives = 147/325 (45%), Gaps = 34/325 (10%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW------IGHPRF 83
            S    L+TG AGFIGS+L++KL++     VI +DN+ TG + NL +           RF
Sbjct: 23  FSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81

Query: 84  ELIRHDVTEPLLIE-----VDQIYHLACPASPIFYKY---NPVKTIKTNVIGTLNMLGLA 135
             I  D+ +    E     VD + H A   S         +P+ T  TN+ G LN+L  A
Sbjct: 82  CFIEGDIRDLTTCEQVMKGVDHVLHQAALGS---VPRSIVDPITTNATNITGFLNILHAA 138

Query: 136 KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           K          ++S  YGD    P+ E   GN  P+   S Y   K V E     Y R +
Sbjct: 139 KNAQVQSFTYAASSSTYGDHPALPKVEENIGN--PL---SPYAVTKYVNEIYAQVYARTY 193

Query: 195 GIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
           G +    R FN +G R + +     V+  + A  ++G+ + +   G  +R FCY+ +++ 
Sbjct: 194 GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQ 253

Query: 253 GLIRLMEGENTGP---INIGNPGEFTMLELAENVKELIN-----PNVEITMVENTPDDPR 304
             I     +++      N+      T+ EL+  + + +N       + I   E    D R
Sbjct: 254 MNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVR 313

Query: 305 QRKPDITKATELLGWEPKIKLRDGL 329
             + D+TKA +LL + P IK+R+GL
Sbjct: 314 HSQADVTKAIDLLKYRPNIKIREGL 338

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score =  230 bits (588), Expect = 3e-73
 Identities = 71/318 (22%), Positives = 131/318 (41%), Gaps = 31/318 (9%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNL--------RKWIGHP 81
            N  IL+TGGAGF+GS+L     E + K +V+V+D + + +  +          K +   
Sbjct: 9   ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 82  RFELIRHDVTEPLLIE------VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           + E+I  D+  PL +        D ++H  A   + +    N    +KTN    LN+L +
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTM---LNQELVMKTNYQAFLNLLEI 125

Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           A+   A+++  S++ VYG+    P       N +P    + Y   K   +  +  +   +
Sbjct: 126 ARSKKAKVIYASSAGVYGNTKA-PNVVGK--NESPE---NVYGFSKLCMDEFVLSHS--N 177

Query: 195 GIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
                  R FN YGPR      +   +V      A+  + + +   G Q R F Y+ D++
Sbjct: 178 DNVQVGLRYFNVYGPREF-YKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236

Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT 311
              ++ M+ + +G  N+G     +  E+   +KE +       +        +  +  I 
Sbjct: 237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIKNPYAFFQKHTQAHIE 296

Query: 312 KATELLGWEPKIKLRDGL 329
                L + P   L  G+
Sbjct: 297 PTILDLDYTPLYDLESGI 314

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  220 bits (563), Expect = 4e-70
 Identities = 76/330 (23%), Positives = 123/330 (37%), Gaps = 36/330 (10%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           ILVTG +G IG+ LV  L E    + ++  +                  + I  DV+   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRD---------TGGIKFITLDVSNRD 52

Query: 95  LIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            I+       +D I+HLA   S    K +P    K N+ GT N+L  AK+    ++++ S
Sbjct: 53  EIDRAVEKYSIDAIFHLAGILSAKGEK-DPALAYKVNMNGTYNILEAAKQHRVEKVVIPS 111

Query: 147 TSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           T  V+G     +           P   R+ +   K  AE L   Y+ + G+++R  R   
Sbjct: 112 TIGVFGPETPKNKVPSITI--TRP---RTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPG 166

Query: 206 TYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
               +     G           A++ E         +     Y+ D +  L+ L E +  
Sbjct: 167 IISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRD 226

Query: 264 G-----PINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP---DITKATE 315
                   N+     FT  EL   +KE I P  EI   E+  D      P   D ++A+ 
Sbjct: 227 KLVLRNGYNVTA-YTFTPSELYSKIKERI-PEFEIEYKEDFRDKIAATWPESLDSSEASN 284

Query: 316 LLGWEPKIKLRDGLPLMEDDFRLRLAVPRK 345
             G+  +  L   +  M D    +L +  K
Sbjct: 285 EWGFSIEYDLDRTIDDMIDHISEKLGIEGK 314

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score =  221 bits (564), Expect = 8e-70
 Identities = 66/313 (21%), Positives = 117/313 (37%), Gaps = 25/313 (7%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHD 89
               I+VTGGAGFIGS++V  L +    +++VVDN   G+K  NL     +    + + D
Sbjct: 45  EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--NIADYMDKED 102

Query: 90  VTEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL 144
               ++       V+ I+H    +S   +    +  +  N   +  +L          L 
Sbjct: 103 FLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYM--MDNNYQYSKELLHYCLEREIPFLY 160

Query: 145 TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
            S++  YG       +        P+   + +   K + +  +     +   +I   R F
Sbjct: 161 ASSAATYGGRTSDFIESRE--YEKPL---NVFGYSKFLFDEYVRQILPEANSQIVGFRYF 215

Query: 205 NTYGPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           N YGPR         V  +   Q   GE P   +      R F YV D+ D  +  +E  
Sbjct: 216 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG 275

Query: 262 NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP-----DITKATEL 316
            +G  N+G     +   +A+      +   +I  +   PD  + R       D+T     
Sbjct: 276 VSGIFNLGTGRAESFQAVADATLAY-HKKGQIEYIPF-PDKLKGRYQAFTQADLTNLRAA 333

Query: 317 LGWEPKIKLRDGL 329
              +P   + +G+
Sbjct: 334 GYDKPFKTVAEGV 346

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score =  220 bits (562), Expect = 2e-69
 Identities = 58/308 (18%), Positives = 106/308 (34%), Gaps = 51/308 (16%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M I++TG  GF+G +L   L     + +  V       ++ L   +              
Sbjct: 1   MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK--EEELESALL------------- 45

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
               + D I HLA    P     +  +    NV    ++L +  R   +  +  +S +  
Sbjct: 46  ----KADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQA 97

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
                          NP      Y E K   E L+ +Y  ++G  + I R  N +G    
Sbjct: 98  TQD------------NP------YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCK 139

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT---GPINIG 269
            +   V++ F  +  R E + V        +  YV D+V  + R +EG  T   G   + 
Sbjct: 140 PNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVP 198

Query: 270 NPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           N  + T+ E+ + + +     ++ T+             +    +  L + P       L
Sbjct: 199 NVFKVTLGEIVDLLYKFKQSRLDRTL------PKLDNLFEKDLYSTYLSYLPSTDFSYPL 252

Query: 330 PLMEDDFR 337
            +  DD  
Sbjct: 253 LMNVDDRG 260

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score =  218 bits (557), Expect = 3e-69
 Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 27/310 (8%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEP 93
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K  NL     +    + + D    
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD--LNIADYMDKEDFLIQ 59

Query: 94  LLIE-----VDQIYHL-ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           ++       V+ I+H  AC ++    +++    +  N   +  +L          L  S+
Sbjct: 60  IMAGEEFGDVEAIFHEGACSSTT---EWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
           +  YG       +        P+   + Y   K + +  +     +   +I   R FN Y
Sbjct: 117 AATYGGRTSDFIESR--EYEKPL---NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVY 171

Query: 208 GPRMNIDD--GRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG 264
           GPR         V  +   Q   GE P   +      R F YV D+ D  +  +E   +G
Sbjct: 172 GPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSG 231

Query: 265 PINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP-----DITKATELLGW 319
             N+G     +   +A+      +   +I  +   PD  + R       D+T        
Sbjct: 232 IFNLGTGRAESFQAVADATLAY-HKKGQIEYIPF-PDKLKGRYQAFTQADLTNLRAAGYD 289

Query: 320 EPKIKLRDGL 329
           +P   + +G+
Sbjct: 290 KPFKTVAEGV 299

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score =  208 bits (532), Expect = 2e-65
 Identities = 83/317 (26%), Positives = 135/317 (42%), Gaps = 37/317 (11%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR+LVTGGAGFIGSH+V+ L+     EV V+DN  TG ++N+            R D+ +
Sbjct: 1   MRVLVTGGAGFIGSHIVEDLLA-RGLEVAVLDNLATGKRENV-----PKGVPFFRVDLRD 54

Query: 93  PLLIE-------VDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA- 140
              +E          + H A       S      +PV   + N++G LN+L   ++ G  
Sbjct: 55  KEGVERAFREFRPTHVSHQAAQASVKVSVE----DPVLDFEVNLLGGLNLLEACRQYGVE 110

Query: 141 RILLTSTSE-VYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
           +++  ST   +YG+ P     +E++     P    S Y   K   E  +  Y + +G++ 
Sbjct: 111 KLVFASTGGAIYGEVPEGERAEETW--PPRPK---SPYAASKAAFEHYLSVYGQSYGLKW 165

Query: 199 RIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTV-----QAPGTQTRSFCYVSDMVD 252
              R  N YGPR +   +  VV+ F  + ++G P+T+            R + YV D+ +
Sbjct: 166 VSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAE 225

Query: 253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITK 312
                +     G  N+G     T  E+   V E      E+      P D  +      K
Sbjct: 226 AHALALFSLE-GIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLK 284

Query: 313 ATELLGWEPKIKLRDGL 329
                GW PK+  ++G+
Sbjct: 285 LMA-HGWRPKVGFQEGI 300

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score =  205 bits (524), Expect = 2e-64
 Identities = 65/322 (20%), Positives = 107/322 (33%), Gaps = 37/322 (11%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N +IL+ G  G IG+ L  KL +    E ++  +    + D +              +  
Sbjct: 2   NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNS------GPFEVVNAL 55

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARIL 143
           +   IE       +  IY +A   S    + NP      N+    ++L LAK     +I 
Sbjct: 56  DFNQIEHLVEVHKITDIYLMAALLSAT-AEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIF 114

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             S+  V+G                 +   + Y   K+  E     YH  +G+++R  R 
Sbjct: 115 WPSSIAVFGPTTPKENTP----QYTIMEPSTVYGISKQAGERWCEYYHNIYGVDVRSIRY 170

Query: 204 FNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME-- 259
                       G      +   +AI  +               Y+ D +D  I +M+  
Sbjct: 171 PGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230

Query: 260 GENTGPINIGNPG--EFTMLELAENVKELINPNVEITMVENTPDDPRQRKP-------DI 310
            E     +  N     FT  E+A  +K+ I P   IT       D RQ+         D 
Sbjct: 231 VEKIKIHSSYNLAAMSFTPTEIANEIKKHI-PEFTITYEP----DFRQKIADSWPASIDD 285

Query: 311 TKATELLGWEPKIKLRDGLPLM 332
           ++A E   W+    L      M
Sbjct: 286 SQAREDWDWKHTFDLESMTKDM 307

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score =  199 bits (508), Expect = 9e-62
 Identities = 75/314 (23%), Positives = 126/314 (40%), Gaps = 41/314 (13%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MRIL+TGGAG +GS+L++  +  + +E++V+DN+ TG ++ L          +I   V
Sbjct: 19  SHMRILITGGAGCLGSNLIEHWLP-QGHEILVIDNFATGKREVLPP---VAGLSVIEGSV 74

Query: 91  TEPLLIE-------VDQIYHLA----CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
           T+  L+E          + H A     P                NV G++N+   A + G
Sbjct: 75  TDAGLLERAFDSFKPTHVVHSAAAYKDPDDWAEDAAT-------NVQGSINVAKAASKAG 127

Query: 140 A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
             R+L   T+  YG P   P          P    + Y   K   E     +     + +
Sbjct: 128 VKRLLNFQTALCYGRPATVPIPIDS-----PTAPFTSYGISKTAGE----AFLMMSDVPV 178

Query: 199 RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR-L 257
              R+ N  GPR+ I  G  +  F  +   G+           R F  +SD +      L
Sbjct: 179 VSLRLANVTGPRLAI--G-PIPTFYKRLKAGQKCFC---SDTVRDFLDMSDFLAIADLSL 232

Query: 258 MEGENTGPINIGNPGEFTMLELAENVKELINPNV--EITMVENTPDDPRQRKPDITKATE 315
            EG  TG  N+      ++ E+ + V + +   +   + +V    DD      D +K   
Sbjct: 233 QEGRPTGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVAPGADDVPSVVLDPSKTET 292

Query: 316 LLGWEPKIKLRDGL 329
             GW+ K+  +D +
Sbjct: 293 EFGWKAKVDFKDTI 306

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score =  192 bits (489), Expect = 8e-59
 Identities = 62/339 (18%), Positives = 122/339 (35%), Gaps = 45/339 (13%)

Query: 29  FQSNMRILVTGGAGFIGSHLVDKLME------NEKNEVIVVDNYFTGSKDNLRKWIGHPR 82
           +   M I + G AG +G  L  +L++          +  ++D +   +            
Sbjct: 11  YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF-----SGA 65

Query: 83  FELIRHDVTEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            +    D++ P   E       D I+HLA   S      +  K  + N+ GT  +    +
Sbjct: 66  VDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAEL-DFDKGYRINLDGTRYLFDAIR 124

Query: 137 RVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
                     R++ TS+  V+G PL +P  + +     P+   + Y   K + E L+ DY
Sbjct: 125 IANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH--TTPL---TSYGTQKAICELLLSDY 179

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDGR--VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
            R+   +    R+          +       SN + + + G+   +  P +         
Sbjct: 180 SRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR 239

Query: 249 DMVDGLIRLME--GENTGPINIGN-PGE-FTMLELAENVKELINPNVEITMVENTPDDPR 304
             V  LI       E  GP    + PG   T+ E  E ++++      + ++   P++  
Sbjct: 240 SAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVA-GEKAVALIRREPNEMI 298

Query: 305 QR-------KPDITKATELLGWEPKIKLRDGLPLM-EDD 335
            R         +  +A E LG+  +    + + +  ED+
Sbjct: 299 MRMCEGWAPGFEAKRARE-LGFTAESSFEEIIQVHIEDE 336

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score =  175 bits (446), Expect = 9e-52
 Identities = 76/365 (20%), Positives = 114/365 (31%), Gaps = 71/365 (19%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN---------------- 73
               R++V GG G+ G      L +    EV +VDN      D+                
Sbjct: 9   HHGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDR 67

Query: 74  LRKW--IGHPRFELIRHDVTEPLLIE-------VDQIYHLACPASP-----IFYKYNPVK 119
           + +W  +     EL   D+ +   +         D + H            +  +   V 
Sbjct: 68  ISRWKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFG--EQRSAPYSMIDRSRAVY 125

Query: 120 TIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLVHPQDESY---------WGNVN 168
           T   NVIGTLN+L   K       ++   T   YG P +   +E Y              
Sbjct: 126 TQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEEGYITITHNGRTDTLPY 184

Query: 169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM---------------NI 213
           P    S Y   K      +    +  GI          YG +                + 
Sbjct: 185 PKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP----INIG 269
             G  ++ F  QA  G PLTV   G QTR +  + D V  +   +            N  
Sbjct: 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQF 304

Query: 270 NPGEFTMLELAENVKEL---INPNVEITMVENT--PDDPRQRKPDITKATELLGWEPKIK 324
              +F++ ELA  V +    +  +V+   V N     +        TK  E LG EP   
Sbjct: 305 T-EQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYL 362

Query: 325 LRDGL 329
               L
Sbjct: 363 SDSLL 367

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347

 Score =  160 bits (406), Expect = 2e-46
 Identities = 88/339 (25%), Positives = 136/339 (40%), Gaps = 53/339 (15%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTGSKDNLRKWIGHPRFELIRHDVT 91
            ++L+TGG GF+GS+L    +     ++IV DN    G+ DNL        FE +  D+ 
Sbjct: 2   AKLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIR 60

Query: 92  EPLLIE-------VDQIYHLACPA------SPIFYKYNPVKTIKTNVIGTLNMLGLAKR- 137
               +         D  +HLA         S I    NP    + NV GTLN+L   ++ 
Sbjct: 61  NKNDVTRLITKYMPDSCFHLA--GQVAMTTS-I---DNPCMDFEINVGGTLNLLEAVRQY 114

Query: 138 -VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG------------KRVAE 184
                I+ +ST++VYGD L   +          +   + YDE             K  A+
Sbjct: 115 NSNCNIIYSSTNKVYGD-LEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAAD 173

Query: 185 TLMFDYHRQHGIEIRIARIFNTYGPR-MNIDDGRVVSNFIAQAIR-----GEPLTVQAPG 238
             M DY R  G+   + R  + YG R     D   V  F  +A+       +P T+   G
Sbjct: 174 QYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG 233

Query: 239 TQTRSFCYVSDMVDGLIRLME------GENTGPINIG--NPGEFTMLELAENVKELINPN 290
            Q R   +  DM+      +       G      NIG       ++LEL + +++  N +
Sbjct: 234 KQVRDVLHAEDMISLYFTALANVSKIRGNA---FNIGGTIVNSLSLLELFKLLEDYCNID 290

Query: 291 VEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           +  T +     D R    DI K T  + W PK+  +DG+
Sbjct: 291 MRFTNLPVRESDQRVFVADIKKITNAIDWSPKVSAKDGV 329

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score =  155 bits (394), Expect = 1e-45
 Identities = 51/236 (21%), Positives = 82/236 (34%), Gaps = 42/236 (17%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R+LVTG AG +GS +   L     +EV + D    G+ +           E++  D+ + 
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGT-LAHEVRLSDIVDLGAAEAH--------EEIVACDLADA 54

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPV-KTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
             +       D I HL   +        P    ++ N+IG  N+   A+ +G  RI+  S
Sbjct: 55  QAVHDLVKDCDGIIHLGGVSVE-----RPWNDILQANIIGAYNLYEAARNLGKPRIVFAS 109

Query: 147 TSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFN 205
           ++   G  P     D        P    S Y   K   E L   Y+ +  IE    RI +
Sbjct: 110 SNHTIGYYPRTTRIDTEV--PRRPD---SLYGLSKCFGEDLASLYYHKFDIETLNIRIGS 164

Query: 206 TYGPRMN---------IDDGRVVSNFIAQAIRGEPL---TVQAPGTQTRSFCYVSD 249
            +    +         +DD       + +A     L    V      T S+     
Sbjct: 165 CFPKPKDARMMATWLSVDDFM---RLMKRAFVAPKLGCTVVYGASANTESWWDNDK 217

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score =  137 bits (348), Expect = 8e-39
 Identities = 43/231 (18%), Positives = 76/231 (32%), Gaps = 36/231 (15%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+LVTG AG +G  + ++L      E++ + +               P  E ++ D+
Sbjct: 2   AMKRLLVTGAAGQLGRVMRERLA--PMAEILRLADLSPLDPA-------GPNEECVQCDL 52

Query: 91  TEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
            +      ++   D I HL   +          + ++ N+IG  N+   A+  G  RI+ 
Sbjct: 53  ADANAVNAMVAGCDGIVHLGGISVE----KPFEQILQGNIIGLYNLYEAARAHGQPRIVF 108

Query: 145 TSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
            S++   G  P              P      Y   K   E L   Y  + G E  + RI
Sbjct: 109 ASSNHTIGYYPQTERLGPDV-----PARPDGLYGVSKCFGENLARMYFDKFGQETALVRI 163

Query: 204 FNTYGPRMNI----------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF 244
            +      N           D   ++       + G P  V         +
Sbjct: 164 GSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCP-VVWGASANDAGW 213

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* Length = 337

 Score =  136 bits (346), Expect = 9e-38
 Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 43/322 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-----EVIVVDN--YFTGSKDNLRKWIGHPRFEL 85
           MR+LVTGGAGFIGSH V +L+          EVIV+D+  Y  G++ NL      PR   
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTY-AGNRANLAPVDADPRLRF 59

Query: 86  IRHDVT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLN 130
           +  D+         L  VD I H A            +  +F         +TNV GT  
Sbjct: 60  VHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGAS--VF--------TETNVQGTQT 109

Query: 131 MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
           +L  A   G  R++  ST++VYG       D   W   +P+   S Y   K  ++ +   
Sbjct: 110 LLQCAVDAGVGRVVHVSTNQVYGS-----IDSGSWTESSPLEPNSPYAASKAGSDLVARA 164

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
           YHR +G+++RI R  N YGP  + +  +++  F+   + G  L +   G   R + +  D
Sbjct: 165 YHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222

Query: 250 MVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRK 307
              G+  ++ G   G I +IG   E T  EL   + + +  +   +  V +      +  
Sbjct: 223 HCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYS 282

Query: 308 PDITKATELLGWEPKIKLRDGL 329
            D  K    LG+ P++   DGL
Sbjct: 283 LDGGKIERELGYRPQVSFADGL 304

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  135 bits (343), Expect = 2e-37
 Identities = 51/332 (15%), Positives = 102/332 (30%), Gaps = 49/332 (14%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           ++++  V G  G +G H    +     ++++++  +   S+    + + +   E    ++
Sbjct: 12  AHVKYAVLGATGLLGHHAARAIRA-AGHDLVLI--HRPSSQ---IQRLAYLEPECRVAEM 65

Query: 91  TEPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILL 144
            +   +E     +D +   A             + + + +  T        +    RIL 
Sbjct: 66  LDHAGLERALRGLDGVIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILY 123

Query: 145 TSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             ++      P   P  E  + +  P G +S Y   K   +    +  R +G+ + I   
Sbjct: 124 VGSAYAMPRHPQGLPGHEGLFYDSLPSG-KSSYVLCKWALDEQAREQAR-NGLPVVIGIP 181

Query: 204 FNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
               G     D G      I     GE   +       R+    ++   GL+  +E    
Sbjct: 182 GMVLGEL---DIGPTTGRVITAIGNGE---MTHYVAGQRNVIDAAEAGRGLLMALERGRI 235

Query: 264 GPINIGNPGEFTMLELAENVKELINPNVEITM----------VENTPDDPRQRKP----- 308
           G   +       M +L   + EL+       M          +         + P     
Sbjct: 236 GERYLLTGHNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDET 295

Query: 309 -----------DITKATELLGWEPKIKLRDGL 329
                      D  KA E LG+     L D L
Sbjct: 296 AIEVMAGGQFLDGRKAREELGFFSTTALDDTL 327

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} Length = 336

 Score =  126 bits (320), Expect = 5e-34
 Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 58/330 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRFELIR 87
            +M++LVTGG GFIGS+ +  ++E   + EVI +D   Y   +  NL+     PR+  ++
Sbjct: 2   HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGY-GSNPANLKDLEDDPRYTFVK 60

Query: 88  HDVT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNML 132
            DV      + L+ +VD + HLA           P   IF        + +NVIGT  +L
Sbjct: 61  GDVADYELVKELVRKVDGVVHLAAESHVDRSISSPE--IF--------LHSNVIGTYTLL 110

Query: 133 GLAKR--VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
              +R     R +  ST EVYGD +     +  +   + +   S Y   K  ++ L+  +
Sbjct: 111 ESIRRENPEVRFVHVSTDEVYGD-I----LKGSFTENDRLMPSSPYSATKAASDMLVLGW 165

Query: 191 HRQHGIEIRIARIFNTYG---------PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
            R + +   I R  N YG         P+            I +A  G  + +   G   
Sbjct: 166 TRTYNLNASITRCTNNYGPYQFPEKLIPKT-----------IIRASLGLKIPIYGTGKNV 214

Query: 242 RSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMVENT 299
           R + YV D V  +  ++    +  I NI    E T LE+ + +  L+    E I +VE+ 
Sbjct: 215 RDWLYVEDHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDR 274

Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
           P    +   D  K T  L W PK    +G+
Sbjct: 275 PGHDLRYSLDSWKITRDLKWRPKYTFDEGI 304

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} Length = 346

 Score =  120 bits (303), Expect = 2e-31
 Identities = 85/330 (25%), Positives = 143/330 (43%), Gaps = 48/330 (14%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRF 83
            F  + M ILVTGGAGFIGS+ V  ++++ +  ++I  D   Y +G+ +N++    HP +
Sbjct: 19  YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY-SGNLNNVKSIQDHPNY 77

Query: 84  ELIRHDVTEPLLIE-------VDQIYHLACPA------SPIFYKYNPVKTIKTNVIGTLN 130
             ++ ++    L+E       V  I + A  A      S I    NP+    TNVIGT+ 
Sbjct: 78  YFVKGEIQNGELLEHVIKERDVQVIVNFA--AESHVDRS-I---ENPIPFYDTNVIGTVT 131

Query: 131 MLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
           +L L K+    +++  ST EVYG  L        +    P+   S Y   K  A+ +   
Sbjct: 132 LLELVKKYPHIKLVQVSTDEVYGS-L---GKTGRFTEETPLAPNSPYSSSKASADMIALA 187

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNF--------IAQAIRGEPLTVQAPGTQT 241
           Y++ + + + + R  N YGP            +        +  A+ G+ L +   G   
Sbjct: 188 YYKTYQLPVIVTRCSNNYGPY----------QYPEKLIPLMVTNALEGKKLPLYGDGLNV 237

Query: 242 RSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMVENT 299
           R + +V+D    +  ++     G + NIG   E T +E+ E +  L+    + I  V + 
Sbjct: 238 RDWLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDR 297

Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
               R+   +  K      WEPK     GL
Sbjct: 298 LGHDRRYAINAEKMKNEFDWEPKYTFEQGL 327

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* Length = 348

 Score =  119 bits (301), Expect = 3e-31
 Identities = 86/334 (25%), Positives = 126/334 (37%), Gaps = 60/334 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDN--YFTGSKDNLRKWIGHPRFELIRHD 89
             I+VTGGAGFIGS+ V  +  N  +  V V+D   Y  G+K NL   I   R EL+  D
Sbjct: 5   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-AGNKANLEA-ILGDRVELVVGD 62

Query: 90  VT-----EPLLIEVDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           +      + L  + D I H A           P+   F        I TN IGT  +L  
Sbjct: 63  IADAELVDKLAAKADAIVHYAAESHNDNSLNDPS--PF--------IHTNFIGTYTLLEA 112

Query: 135 AKRVGARILLTSTSEVYGD-PLVHPQDESYWGNV------NPIGVRSCYDEGKRVAETLM 187
           A++   R    ST EVYGD PL         G              S Y   K  ++ ++
Sbjct: 113 ARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV 172

Query: 188 FDYHRQHGIEIRIARIFNTYG---------PRMNIDDGRVVSNFIAQAIRGEPLTVQAPG 238
             + R  G++  I+   N YG         PR            I   + G    +   G
Sbjct: 173 KAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQ-----------ITNILAGIKPKLYGEG 221

Query: 239 TQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMV 296
              R + + +D   G+  ++     G    IG  GE    E+ E + E +    +    V
Sbjct: 222 KNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHV 281

Query: 297 ENTPDDPRQRKPDITKATELLGWEPKI-KLRDGL 329
            +      +   D +K  + LGW P+     +GL
Sbjct: 282 TDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGL 315

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score =  117 bits (297), Expect = 1e-30
 Identities = 83/332 (25%), Positives = 135/332 (40%), Gaps = 52/332 (15%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
             IL+ GGAG+IGSH V KL++ E   V+VVDN  TG +D +         +    D+  
Sbjct: 2   NSILICGGAGYIGSHAVKKLVD-EGLSVVVVDNLQTGHEDAI-----TEGAKFYNGDLRD 55

Query: 92  EPLLIEV------DQIYHLACPASPIFYKY------NPVKTIKTNVIGTLNMLGLAKRVG 139
           +  L +V      + + H A                 P++    NV G L +L +     
Sbjct: 56  KAFLRDVFTQENIEAVMHFAA------DSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK 109

Query: 140 A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
             + + +ST+  YG+  V    E            + Y E K   E ++  Y +   +  
Sbjct: 110 VDKFIFSSTAATYGEVDVDLITEET-----MTNPTNTYGETKLAIEKMLHWYSQASNLRY 164

Query: 199 RIARIFNTYG--PRMNI-DDGRVVSN---FIAQAIRG--EPLTV-----QAP-GTQTRSF 244
           +I R FN  G  P   I +D R  ++    + Q   G  E + +       P GT  R +
Sbjct: 165 KIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDY 224

Query: 245 CYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP 300
            +V D+V      L  L  G  +   N+GN   F++ E+ + V+E+ N  +   +     
Sbjct: 225 IHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRA 284

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLM 332
            DP +      KA E LGW+P+      +  +
Sbjct: 285 GDPARLVASSQKAKEKLGWDPR---YVNVKTI 313

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361

 Score =  114 bits (287), Expect = 4e-29
 Identities = 88/358 (24%), Positives = 135/358 (37%), Gaps = 92/358 (25%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN--YFTGSKDNLRKWIGHPRFELIRHDV 90
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   Y  G+ ++L       R+     D+
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-AGNLESLSDISESNRYNFEHADI 59

Query: 91  TEPLLIE-------VDQIYHLAC----------PASPIFYKYNPVKTIKTNVIGTLNML- 132
            +   I         D + HLA           PA   F        I+TN++GT  +L 
Sbjct: 60  CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPA--AF--------IETNIVGTYALLE 109

Query: 133 ---------GLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVN------PIGVRSCYD 177
                    G  K+   R    ST EVYGD L HP +      +            S Y 
Sbjct: 110 VARKYWSALGEDKKNNFRFHHISTDEVYGD-LPHPDEVENSVTLPLFTETTAYAPSSPYS 168

Query: 178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR---------MNIDDGRVVSNFIAQAIR 228
             K  ++ L+  + R +G+   +    N YGP          +           I  A+ 
Sbjct: 169 ASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLV-----------ILNALE 217

Query: 229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELI 287
           G+PL +   G Q R + YV D    L  ++     G   NIG   E   L++   V  + 
Sbjct: 218 GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDV---VFTIC 274

Query: 288 NPNVEITMVENTPDDPRQRK--------P--------DITKATELLGWEPKIKLRDGL 329
           +      + E  P     R+        P        D  K +  LGW+P      G+
Sbjct: 275 D-----LLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLETFESGI 327

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397

 Score = 98.1 bits (245), Expect = 4e-23
 Identities = 70/374 (18%), Positives = 128/374 (34%), Gaps = 96/374 (25%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+       +            ++   
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 91  TEPL--------LIEVDQIYHLACPA--SPIFYKYNPVKTI------------------- 121
                       L   D    +      + +F ++ P+  +                   
Sbjct: 61  GPKPPWADRYAALEVGD----VRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKY 116

Query: 122 -KTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVH-------PQDESYWGNVNPIGV 172
              NV+G L +L         +I+ +S++ ++G+P +        P D +          
Sbjct: 117 YDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINA-----KKSP 171

Query: 173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG--PRMNIDDGR------------- 217
            S Y E K +AE ++ D    +GI+    R FN  G        DG              
Sbjct: 172 ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHE-----DGDIGEHYQGSTHLIP 226

Query: 218 -VVSNFIAQAIRGEPLTVQAP------------------GTQTRSFCYVSDMVDG----L 254
            ++   ++     + LT+                     GT  R + +V D+       L
Sbjct: 227 IILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILAL 286

Query: 255 IRLMEGENTGP------INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKP 308
             + +             N+G    +++ E+ E  ++     + +        DP     
Sbjct: 287 DYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVA 346

Query: 309 DITKATELLGWEPK 322
              KA E+LGW+PK
Sbjct: 347 ASDKAREVLGWKPK 360

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 93.4 bits (232), Expect = 1e-21
 Identities = 66/344 (19%), Positives = 122/344 (35%), Gaps = 59/344 (17%)

Query: 25  FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-------DNYFTGSKDNLRKW 77
            + F+Q   R+ VTG  GF G  L   L +     V           + F  +   +   
Sbjct: 3   NNSFWQ-GKRVFVTGHTGFKGGWLSLWL-QTMGATVKGYSLTAPTVPSLFETA--RVADG 58

Query: 78  IGHPRFELIRHDVTEPLLIEV--DQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNML 132
           +     ++   +     + E   + ++H+A  A P+    Y   PV+T  TNV+GT+ +L
Sbjct: 59  MQSEIGDIRDQNKLLESIREFQPEIVFHMA--AQPLVRLSYS-EPVETYSTNVMGTVYLL 115

Query: 133 GLAKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
              + VG    ++  ++ + Y     + +    +     +G    Y   K  AE +   Y
Sbjct: 116 EAIRHVGGVKAVVNITSDKCYD----NKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSY 171

Query: 191 ---------HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT 241
                    + QHG  +   R  N  G   +    R+V + +    + +P+ ++ P    
Sbjct: 172 RNSFFNPANYGQHGTAVATVRAGNVIGGG-DWALDRIVPDILRAFEQSQPVIIRNP-HAI 229

Query: 242 RSFCYVSDMVDGLIRLME------GENTGPINIGNPGE--FTMLELAENVKELINPNVEI 293
           R + +V + + G + L +       E     N G        +  + E + +        
Sbjct: 230 RPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASW 289

Query: 294 TMVENTPDDPRQRKP--------DITKATELLGWEPKIKLRDGL 329
            +  N         P        D +KA   LGW P+  L   L
Sbjct: 290 QLDGN-------AHPHEAHYLKLDCSKAKMQLGWHPRWNLNTTL 326

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score = 88.8 bits (221), Expect = 3e-20
 Identities = 62/323 (19%), Positives = 111/323 (34%), Gaps = 47/323 (14%)

Query: 34  RILVTGGAGFIGSHLVDKLME-----------NEKNEVIVVDNYFTGSKDNLRKWIGHP- 81
           R+ VTGG GF+GS ++  L+E           + + +  V           L    G   
Sbjct: 3   RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV---------SFLTNLPGASE 53

Query: 82  RFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
           +      D++ P      +     I+H A P              K  V G L +L    
Sbjct: 54  KLHFFNADLSNPDSFAAAIEGCVGIFHTASP-IDFAVSEPEEIVTKRTVDGALGILKACV 112

Query: 137 RVGA--RILLTST--SEVYGDPLVHPQDESYWGNVNPIGVR----SCYDEGKRVAETLMF 188
                 R + TS+  +  +        DES W +V+ +         Y   K +AE  + 
Sbjct: 113 NSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVL 172

Query: 189 DYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
           ++  Q+GI+   + +  I    G  +               + G+   +           
Sbjct: 173 EFGEQNGIDVVTLILPFIV---GRFVC-PKLPDSIEKALVLVLGKKEQIGVTR---FHMV 225

Query: 246 YVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQ 305
           +V D+    I L+E    G     +P    + E+++ +     P  +I  V+   +    
Sbjct: 226 HVDDVARAHIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKY-PEYQILTVDELKEIKGA 284

Query: 306 RKPDI-TKATELLGWEPKIKLRD 327
           R PD+ TK     G++ K  + D
Sbjct: 285 RLPDLNTKKLVDAGFDFKYTIED 307

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 88.3 bits (220), Expect = 6e-20
 Identities = 81/347 (23%), Positives = 139/347 (40%), Gaps = 76/347 (21%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRH 88
           +   ILVTGGAG+IGSH   +L+ +   +V++ DN     ++ +   + I          
Sbjct: 4   TKGTILVTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKITGKTPAFHET 62

Query: 89  DVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           DV++   +        +    H A         A PI Y  N       N+   L++L +
Sbjct: 63  DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRN-------NLDSLLSLLRV 115

Query: 135 AKRVGARILLTSTS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
            +    + ++ S+S  VYG P   P DE++     P+   + Y + K +AE ++ D    
Sbjct: 116 MRERAVKRIVFSSSATVYGVPERSPIDETF-----PLSATNPYGQTKLMAEQILRDVEAA 170

Query: 194 HGIEIRIA--RIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV------QA 236
                R+A  R FN  G      I +D   + N    ++AQ A+ + E L V        
Sbjct: 171 DP-SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP 229

Query: 237 PGTQTRSFCYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELA---ENV--KELI 287
            GT  R + +V D+  G    L  L   + +  +N+G    +++LE+    E    + + 
Sbjct: 230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAV- 288

Query: 288 NPNVEITMVENTPDDPRQRKPDI-------TKATELLGWEPKIKLRD 327
               E+          R R  D+         A E +GW+ +  L  
Sbjct: 289 --PYELV--------AR-RPGDVAECYANPAAAAETIGWKAERDLER 324

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} Length = 321

 Score = 87.6 bits (218), Expect = 8e-20
 Identities = 82/341 (24%), Positives = 133/341 (39%), Gaps = 74/341 (21%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
             +MR L+TG AGF+G +L + L E  +N EV        G+          P  E+I  
Sbjct: 10  HGSMRALITGVAGFVGKYLANHLTE--QNVEVF-------GTS--RNNEAKLPNVEMISL 58

Query: 89  DVTEP-----LLIEV--DQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 137
           D+ +      ++ ++  D I+HLA       S  +   N   T  TNV GTL++L   + 
Sbjct: 59  DIMDSQRVKKVISDIKPDYIFHLAAKSSVKDS--WL--NKKGTFSTNVFGTLHVLDAVRD 114

Query: 138 VG--ARILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
                RIL   +SE YG  L    P  E      N +   S Y   K     L   Y + 
Sbjct: 115 SNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPYGVSKASVGMLARQYVKA 169

Query: 194 HGIEIRIARIFNTYGPRMNIDDGR----VVSNF------IAQAIRGEPLTV---QAPGTQ 240
           +G++I   R FN  GP       +    V  +F      I    +   + V   +A    
Sbjct: 170 YGMDIIHTRTFNHIGPG------QSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEA---- 219

Query: 241 TRSFCYVSDMVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENVKELINPNVEITMVENT 299
            R F  V D+V     L +   TG + N+ +     + ++ + +  + N  ++  +    
Sbjct: 220 VRDFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTEL---- 275

Query: 300 PDDPRQRKP--------DITKATELLGWEPKIKLRDGLPLM 332
             +P Q +P           +  +  GW+P+I L   L  +
Sbjct: 276 --NPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEI 314

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338

 Score = 84.4 bits (210), Expect = 1e-18
 Identities = 86/346 (24%), Positives = 143/346 (41%), Gaps = 77/346 (22%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L   + +G      +  D+
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 91  TEPLLIE-------VDQIYHLAC-------PASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
               L+        +D + H A           P+ Y  N       NV GTL ++   +
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDN-------NVNGTLRLISAMR 112

Query: 137 RVGARILLTSTSE-VYGDPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQH 194
               +  + S+S  VYGD    P  ES+     P G  +S Y + K + E ++ D  +  
Sbjct: 113 AANVKNFIFSSSATVYGDNPKIPYVESF-----PTGTPQSPYGKSKLMVEQILTDLQKAQ 167

Query: 195 GIEIRIA--RIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV-----QAP- 237
             +  IA  R FN  G  P  ++ +D + + N    +IAQ A+ R + L +         
Sbjct: 168 P-DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTED 226

Query: 238 GTQTRSFCYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELA---ENV--KELIN 288
           GT  R + +V D+ DG    + +L         N+G     ++L++         K +  
Sbjct: 227 GTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPV-- 284

Query: 289 PNVEITMVENTPDDPRQRKPDI-------TKATELLGWEPKIKLRD 327
            N            PR R+ D+       +KA   L W     L +
Sbjct: 285 -NYHFA--------PR-REGDLPAYWADASKADRELNWRVTRTLDE 320

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 58/326 (17%), Positives = 116/326 (35%), Gaps = 47/326 (14%)

Query: 34  RILVTGGAGFIGSHLVDKLME----------NEKNEVIVVDNYFTGSKDNLRKWIGHPRF 83
              V GG GF+ S LV  L++          +  N+  V          +L +       
Sbjct: 11  TACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKV---------SHLLELQELGDL 61

Query: 84  ELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
           ++ R D+T+       +   D ++H+A P      +      IK  + G +N++    R 
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATPV-HFASEDPENDMIKPAIQGVVNVMKACTRA 120

Query: 139 GA--RILLT-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSC----YDEGKRVAETLMF 188
            +  R++LT S + V  + L       DE  W ++  +         Y   K +AE   +
Sbjct: 121 KSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAW 180

Query: 189 DYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC 245
            +  ++ I+   +    +    G  +  D    +   ++     E L     G Q  S  
Sbjct: 181 KFAEENNIDLITVIPTLMA---GSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGS 237

Query: 246 Y----VSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD 301
                V D+    I + E E+     I      ++ ELA+ + +   P  ++   +    
Sbjct: 238 VSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRY-PQYKVP-TDFGDF 295

Query: 302 DPRQRKPDITKATELLGWEPKIKLRD 327
            P+ +    ++     G+  K  + +
Sbjct: 296 PPKSKLIISSEKLVKEGFSFKYGIEE 321

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321

 Score = 83.0 bits (206), Expect = 3e-18
 Identities = 74/342 (21%), Positives = 126/342 (36%), Gaps = 65/342 (19%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +    E++        ++D L          L+    
Sbjct: 2   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELV------LRTRDEL---------NLLDSRA 46

Query: 91  TEPLLIEV--DQIYHLACPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
                     DQ+Y  A     I      P   I  N++   N++  A +    ++L   
Sbjct: 47  VHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLG 106

Query: 147 TSEVYGDPLVHPQ--DESYW--GNVNP----------IGVRSCYDEGKRVAETLMFDYHR 192
           +S +Y  P +  Q   ES    G + P           G++ C              Y+R
Sbjct: 107 SSCIY--PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCES------------YNR 152

Query: 193 QHGIEIRIARIFNTYGPRMNID--DGRVVSNFI-----AQAIRGEPLTVQAPGTQTRSFC 245
           Q+G + R     N YGP  N    +  V+   +     A A +   + V   GT  R F 
Sbjct: 153 QYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 212

Query: 246 YVSDMVDGLIRLME----------GENTGPINIGNPGEFTMLELAENVKELINPNVEITM 295
           +V DM    I +ME                IN+G   + T+ ELA+ + +++     +  
Sbjct: 213 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVF 272

Query: 296 VENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
             + PD   ++  D+T+  +L GW  +I L  GL      F 
Sbjct: 273 DASKPDGTPRKLLDVTRLHQL-GWYHEISLEAGLASTYQWFL 313

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 80.1 bits (198), Expect = 9e-18
 Identities = 34/237 (14%), Positives = 76/237 (32%), Gaps = 39/237 (16%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           +   +I++ G +GF+GS L+++ +     EV  V        + ++    +   ++ + D
Sbjct: 2   EKVKKIVLIGASGFVGSALLNEALN-RGFEVTAV----VRHPEKIKI--ENEHLKVKKAD 54

Query: 90  VTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RIL 143
           V+       +    D +     P        N        +   L ++   K+ G  R L
Sbjct: 55  VSSLDEVCEVCKGADAVISAFNPGW------NNPDIYDETIKVYLTIIDGVKKAGVNRFL 108

Query: 144 LTST-SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
           +      ++  P +   D             +     K + E  +    ++  I+     
Sbjct: 109 MVGGAGSLFIAPGLRLMDSGEV-------PENILPGVKALGEFYLNFLMKEKEIDWVFFS 161

Query: 203 IFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
                 P  ++  G     +    +  + + V   G    S   V D    +I  +E
Sbjct: 162 ------PAADMRPGVRTGRYR---LGKDDMIVDIVG---NSHISVEDYAAAMIDELE 206

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 82/355 (23%), Positives = 139/355 (39%), Gaps = 83/355 (23%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRH 88
           ++  +LVTGGAG+IGSH V +L+EN   + +V DN    + D++   + +          
Sbjct: 10  TSKIVLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV 68

Query: 89  DVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
           D+ +   +E       +D + H A           P+ Y Y        N++GT+ +L L
Sbjct: 69  DLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRY-Y------HNNILGTVVLLEL 121

Query: 135 AKRVGARILLTSTSE-VYGDPLVHPQ----DESYWGNVNPIGVRSCYDEGKRVAETLMFD 189
            ++      + S+S  VYGD    P      E       P+G  + Y   K   E ++ D
Sbjct: 122 MQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC-----PLGPTNPYGHTKYAIENILND 176

Query: 190 YHRQHGIEIRIA--RIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV---- 234
            +       + A  R FN  G  P   I +D   + N    ++AQ A+ R E L +    
Sbjct: 177 LYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD 236

Query: 235 -QAP-GTQTRSFCYVSDMVDG----LIRLMEGENTGP----INIGNPGEFTMLELA---E 281
             +  GT  R + +V D+  G    L  L             N+G+    T+ E+     
Sbjct: 237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFC 296

Query: 282 NV--KELINPNVEITMVENTPDDPRQRKPDI-------TKATELLGWEPKIKLRD 327
                +L     ++T         R R  D+        +A   L W+ ++++ D
Sbjct: 297 KASGIDL---PYKVT--------GR-RAGDVLNLTAKPDRAKRELKWQTELQVED 339

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score = 80.8 bits (200), Expect = 2e-17
 Identities = 56/341 (16%), Positives = 105/341 (30%), Gaps = 63/341 (18%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-------TGSKDNLRKWIGHP-- 81
               +LVTG  GF+ SH+V++L+E+          Y             NL+K       
Sbjct: 10  EGSLVLVTGANGFVASHVVEQLLEH---------GYKVRGTARSASKLANLQKRWDAKYP 60

Query: 82  -RFE-LIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
            RFE  +  D+ +      ++     + H+   AS + +     + +   + GTLN L  
Sbjct: 61  GRFETAVVEDMLKQGAYDEVIKGAAGVAHI---ASVVSFSNKYDEVVTPAIGGTLNALRA 117

Query: 135 AKRVGA--RILLT-STSEVYGDPLVHPQ---DESYWGNVNPIGVRSCYDEG--------- 179
           A    +  R +LT ST               DE  W   N   +                
Sbjct: 118 AAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW---NLESIDKAKTLPESDPQKSLW 174

Query: 180 -----KRVAETLMFDYHRQHGIEIRIARIFN---TYGPRMNIDDGRVVSN-FIAQAIRGE 230
                K  AE   + +  ++     +  +     T G   + +     ++ ++     GE
Sbjct: 175 VYAASKTEAELAAWKFMDENKPHFTLNAV-LPNYTIGTIFDPETQSGSTSGWMMSLFNGE 233

Query: 231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT-GPINIGNPGEFTMLELAENVKELINP 289
                A     + +    D+    +  +           G  G F    +    ++L  P
Sbjct: 234 VSPALAL-MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY-P 291

Query: 290 NVEITMVENTPDDPRQRKPDITKATELL---GWEPKIKLRD 327
           +      +         K D   + E+L   G      + +
Sbjct: 292 SKTFP-ADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEE 331

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score = 79.6 bits (197), Expect = 6e-17
 Identities = 64/325 (19%), Positives = 116/325 (35%), Gaps = 46/325 (14%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLME----------NEKNEVIVVDNY-FTGSKDNLRKWIG 79
            +  + VTG +GFIGS LV +L+E          +  N   V        ++ +L     
Sbjct: 4   QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHL----- 58

Query: 80  HPRFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVK-TIKTNVIGTLNMLG 133
                L + D+ +       +     ++H+A P    F   +P    IK  + G L ++ 
Sbjct: 59  ----TLWKADLADEGSFDEAIKGCTGVFHVATPM--DFESKDPENEVIKPTIEGMLGIMK 112

Query: 134 LAKRVGA--RILLTST--SEVYGDPLVHPQDESYWGNVNPIGVRSC----YDEGKRVAET 185
                    R++ TS+  +    +  +   DES W ++     +      Y   K +AE 
Sbjct: 113 SCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ 172

Query: 186 LMFDYHRQHGIE---IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 242
             + Y +++ I+   I    +    GP +               I G             
Sbjct: 173 AAWKYAKENNIDFITIIPTLVV---GPFIM-SSMPPSLITALSPITGNEAHYSIIR--QG 226

Query: 243 SFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDD 302
            F ++ D+ +  I L E        I +  +  +L+LA+ ++E   P   I       D+
Sbjct: 227 QFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKY-PEYNIPTEFKGVDE 285

Query: 303 PRQRKPDITKATELLGWEPKIKLRD 327
             +     +K    LG+E K  L D
Sbjct: 286 NLKSVCFSSKKLTDLGFEFKYSLED 310

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348

 Score = 74.5 bits (184), Expect = 4e-15
 Identities = 85/354 (24%), Positives = 141/354 (39%), Gaps = 85/354 (24%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-----FTGSK----DNLRKWIGHPR 82
             ++LVTGGAG+IGSH V +L+E      +V+DN+       GS       +++  G   
Sbjct: 2   AEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGR-S 59

Query: 83  FELIRHDVTEPLLIE-------VDQIYHLA-------CPASPIFYKYNPVKTIKTNVIGT 128
            E    D+ +   ++          + H A           P+ Y          N+ GT
Sbjct: 60  VEFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRV-------NLTGT 112

Query: 129 LNMLGLAKRVGARILLTSTSE-VYGDPLVHPQDESYWGNVNPIGVRSC-YDEGKRVAETL 186
           + +L + K  G + L+ S+S  VYG+P   P DE++     P G  +  Y + K   E +
Sbjct: 113 IQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH-----PTGGCTNPYGKSKFFIEEM 167

Query: 187 MFDYHRQHGIEIRIA--RIFNTYG--PRMNI-DDGRVVSN----FIAQ-AI-RGEPLTV- 234
           + D  +           R FN  G      I +D + + N    +++Q AI R E L V 
Sbjct: 168 IRDLCQADK-TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF 226

Query: 235 ----QAP-GTQTRSFCYVSDMVDG----LIRLMEGENTGPINIGNPGEFTMLELA---EN 282
                   GT  R + +V D+  G    L +L E       N+G    +++L++    E 
Sbjct: 227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEK 286

Query: 283 V--KELINPNVEITMVENTPDDPRQRKPDI-------TKATELLGWEPKIKLRD 327
              K++     ++          R R+ D+       + A E LGW   + L  
Sbjct: 287 ASGKKI---PYKVV--------AR-REGDVAACYANPSLAQEELGWTAALGLDR 328

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 74.6 bits (183), Expect = 7e-15
 Identities = 54/338 (15%), Positives = 102/338 (30%), Gaps = 81/338 (23%)

Query: 10  HNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENE--KNEVI------ 61
             + + P P+P              +L+TG  GF+G +LV +L+        +I      
Sbjct: 61  ATAVNLPGPSPEL----------RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE 110

Query: 62  --------VVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEP-----------LLIEVDQ 100
                   +   + +G  + LR +  +   R E++  D +EP           L   VD 
Sbjct: 111 SDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDL 170

Query: 101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYG------- 152
           I   A  A    + Y   +    NV GT  ++ +A           ST++V         
Sbjct: 171 IVDSA--AMVNAFPY--HELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226

Query: 153 ---DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
                +               G    Y   K   E L+ + +    + + + R       
Sbjct: 227 TEDADIRVISPTRTVDGGWAGG----YGTSKWAGEVLLREANDLCALPVAVFRCGMILAD 282

Query: 210 R-----MNIDDGRVVSNFI--AQAIRGEPLTVQAPGTQTRSFCYVSDM--VDGLIRLM-- 258
                 +N+ D   V+  +    A    P +   P ++        D   V  +   +  
Sbjct: 283 TSYAGQLNMSDW--VTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAV 340

Query: 259 -------EGENTGPI-NIGNPGE--FTMLELAENVKEL 286
                           ++ NP +    + E  + + E 
Sbjct: 341 LGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 72.1 bits (176), Expect = 3e-14
 Identities = 40/280 (14%), Positives = 77/280 (27%), Gaps = 50/280 (17%)

Query: 36  LVTGGAGFIGSHLVDKL----MENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           L+ G  G IG+ L + L          +V  V      ++     W        ++ D++
Sbjct: 5   LIVGVTGIIGNSLAEILPLADTPGGPWKVYGV------ARRTRPAWHEDNPINYVQCDIS 58

Query: 92  EP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RIL 143
           +P      L  +  + H+         +    +  + N     N+L            I 
Sbjct: 59  DPDDSQAKLSPLTDVTHVFYVTWAN--RSTEQENCEANSKMFRNVLDAVIPNCPNLKHIS 116

Query: 144 LTSTSEVYGDPLVH---------PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           L +  + Y  P            P  E              YD      + ++ +  ++ 
Sbjct: 117 LQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYM---NFYYDL----EDIMLEEVEKKE 169

Query: 195 GIEIRIARIFNTYGPR----MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT-----RSFC 245
           G+   + R  N +G      MN+     V   I     G+ L     G +          
Sbjct: 170 GLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAI-CKHEGKVLRF--TGCKAAWDGYSDCS 226

Query: 246 YVSDMVDGLIRLMEGENT--GPINIGNPGEFTMLELAENV 283
               + +  I             N+ N   F      + +
Sbjct: 227 DADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVL 266

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 59/285 (20%), Positives = 105/285 (36%), Gaps = 57/285 (20%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD-----NLRKWIGHPRFEL 85
            N  IL+TGG G  G   V K+++    + I+V   +  S+D      +      PR   
Sbjct: 20  DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIV---Y--SRDELKQSEMAMEFNDPRMRF 74

Query: 86  IRHDV-----TEPLLIEVDQIYHLAC----PASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
              DV         L  VD   H A     P +    +YNP++ IKTN++G  N++    
Sbjct: 75  FIGDVRDLERLNYALEGVDICIHAAALKHVPIA----EYNPLECIKTNIMGASNVINACL 130

Query: 137 RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD---YHR 192
           +   ++++  ST     D   +P        +N  G        K  ++ L      +  
Sbjct: 131 KNAISQVIALST-----DKAANP--------INLYGA------TKLCSDKLFVSANNFKG 171

Query: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR-GEPLTVQAPGTQTRSFCYVSDMV 251
               +  + R  N  G R     G VV  F          + +      TR +  + + V
Sbjct: 172 SSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPITDI-RMTRFWITLDEGV 225

Query: 252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMV 296
             +++ ++  + G I +       M +LA    + + PN    ++
Sbjct: 226 SFVLKSLKRMHGGEIFVPKIPSMKMTDLA----KALAPNTPTKII 266

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 53.4 bits (128), Expect = 1e-08
 Identities = 26/228 (11%), Positives = 67/228 (29%), Gaps = 30/228 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M+I + G  G  GS ++++      +EV         +   +     H    +++ D+ +
Sbjct: 1   MKIGIIGATGRAGSRILEEAKN-RGHEVTA----IVRNAGKIT--QTHKDINILQKDIFD 53

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVY 151
             L ++     +                 + +V    +++ +       R+L+   +   
Sbjct: 54  LTLSDLSDQNVVVDAYGI------SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAASL 107

Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
                  +D +       +     Y   +  A+ L      Q             + P  
Sbjct: 108 Q----IDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFEPGE 163

Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
              D ++  + +              G+   SF  + D    ++  +E
Sbjct: 164 RTGDYQIGKDHL------------LFGSDGNSFISMEDYAIAVLDEIE 199

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 47/295 (15%), Positives = 87/295 (29%), Gaps = 41/295 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            +IL+ G  G +G  L  +L   + +EV  +      S   +   +     ++ R D   
Sbjct: 4   SKILIAG-CGDLGLELARRLTA-QGHEVTGL----RRSAQPMPAGVQTLIADVTRPDTLA 57

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVY 151
            ++    +I      AS    +Y+      + V G  N L   +      +   S++ VY
Sbjct: 58  SIVHLRPEILVYCVAAS----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVY 113

Query: 152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM 211
           G  +    DE                +    AE L+            I R    YGP  
Sbjct: 114 GQEVEEWLDEDTP--PIAKDFSG---KRMLEAEALL------AAYSSTILRFSGIYGP-- 160

Query: 212 NIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP----IN 267
               GR     I Q     P    A      +  +  D    +  L++  +         
Sbjct: 161 ----GR--LRMIRQ--AQTPEQWPARN-AWTNRIHRDDGAAFIAYLIQQRSHAVPERLYI 211

Query: 268 IGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
           + +     + +L   + +             TP     +K    +     G++  
Sbjct: 212 VTDNQPLPVHDLLRWLADRQGIAYPAGA---TPPVQGNKKLSNARLLA-SGYQLI 262

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 6e-08
 Identities = 48/348 (13%), Positives = 100/348 (28%), Gaps = 109/348 (31%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDN----LRKWIGHPR 82
             F  + +IL+T         + D L       + +  +  T + D     L K++    
Sbjct: 260 NAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP 315

Query: 83  FELIRHDV--TEPLLI----EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK 136
            +L   +V  T P  +    E  +       A+   +K+     + T +  +LN+L  A 
Sbjct: 316 QDL-PREVLTTNPRRLSIIAESIRDG----LATWDNWKHVNCDKLTTIIESSLNVLEPA- 369

Query: 137 RVGARILLTSTSEVYGDPLVHPQD--------ESYWGNVNPIGVRSCYDE--GKRVAE-- 184
                       +++    V P             W +V    V    ++     + E  
Sbjct: 370 ---------EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQ 420

Query: 185 ---------TLMFDYHRQ-------HGIEI---RIARIFNTYGPRMNIDDGRVVS----- 220
                    ++  +   +       H   +    I + F++        D    S     
Sbjct: 421 PKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHH 480

Query: 221 --------------------NFIAQAIRGEPLTVQAPGTQTRSFC-------YVSD---- 249
                                F+ Q IR +     A G+   +         Y+ D    
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540

Query: 250 ---MVDGLIRLMEGENTGPINIGNPGEFT-MLELAENVKELINPNVEI 293
              +V+ ++  +       I      ++T +L +A     L+  +  I
Sbjct: 541 YERLVNAILDFLPKIEENLIC----SKYTDLLRIA-----LMAEDEAI 579

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 51.6 bits (124), Expect = 8e-08
 Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 13/121 (10%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
             MR+LV G  G +  +L+ +L   + +E +        +++   +       +++  ++
Sbjct: 20  QGMRVLVVGANGKVARYLLSELKN-KGHEPVA----MVRNEEQGPELRERGASDIVVANL 74

Query: 91  TEPL---LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
            E        +D +   A  + P        KTI  ++ G +  +  A++ G  R ++ S
Sbjct: 75  EEDFSHAFASIDAVVFAAG-SGP---HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVS 130

Query: 147 T 147
           +
Sbjct: 131 S 131

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273

 Score = 48.7 bits (117), Expect = 8e-07
 Identities = 60/323 (18%), Positives = 103/323 (31%), Gaps = 94/323 (29%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           MR L+TG +G +G  L   L  +E++EVI V                   ++L   D+T+
Sbjct: 1   MRTLITGASGQLGIELSRLL--SERHEVIKVY----------NSSEIQGGYKL---DLTD 45

Query: 93  PLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAKR 137
              +E        D I + A  A                  K  K N     +++   K 
Sbjct: 46  FPRLEDFIIKKRPDVIINAA--A------MTDVDKCEIEKEKAYKINAEAVRHIVRAGKV 97

Query: 138 VGARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
           + + I+  ST  V+          +D       NPI     Y   K + ET         
Sbjct: 98  IDSYIVHISTDYVFDGEKGNYK-EEDI-----PNPINY---YGLSKLLGETFALQDD--S 146

Query: 195 GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR----GEPLTV--QAPGTQTRSFCYVS 248
            I IR + I   +  +           F     +    G+ +        +         
Sbjct: 147 LI-IRTSGI---FRNK----------GFPIYVYKTLKEGKTVFAFKGY-YSPI----SAR 187

Query: 249 DMVDGLIRLMEGENTGPINIGNPG----EFTMLELAENVKELINPNVEITMVENTPDDPR 304
            +   ++ L+E   TG I++        E      A  +KE  N   E+  V        
Sbjct: 188 KLASAILELLELRKTGIIHVAGERISRFEL-----ALKIKEKFNLPGEVKEV--DEVRGW 240

Query: 305 Q-RKP-----DITKATELLGWEP 321
             ++P     D ++A ++L  + 
Sbjct: 241 IAKRPYDSSLDSSRARKILSTDF 263

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 26/136 (19%), Positives = 43/136 (31%), Gaps = 24/136 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +   +LVTG +G  G  +  KL E     V         S     K       ++   D+
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKG---LVRSAQGKEKI--GGEADVFIGDI 57

Query: 91  TEPLLIE-----VDQIYHLA-------------CPASPIFYKYNPVKTIKTNVIGTLNML 132
           T+   I      +D +  L                  P F   +     + + IG  N +
Sbjct: 58  TDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQI 117

Query: 133 GLAKRVG-ARILLTST 147
             AK  G   I++  +
Sbjct: 118 DAAKVAGVKHIVVVGS 133

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 45.4 bits (107), Expect = 8e-06
 Identities = 33/229 (14%), Positives = 61/229 (26%), Gaps = 30/229 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           M+I V G  G  GS +V +      +EV+ VV +     K   R              +T
Sbjct: 1   MKIAVLGATGRAGSAIVAEARR-RGHEVLAVVRD---PQKAADRLGATVATLVKEPLVLT 56

Query: 92  EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV 150
           E  L  VD +             Y        ++    +++ L +      + +  ++ +
Sbjct: 57  EADLDSVDAVVDALSVPWGSGRGY-------LHLDFATHLVSLLRNSDTLAVFILGSASL 109

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 210
                 HP    +  +            G                +            P 
Sbjct: 110 AMPGADHPMILDFPESAASQPWYD----GALYQYYEYQFLQMNANVNWIGIS------PS 159

Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
                G   S         + L V   G   +S     +M   ++  +E
Sbjct: 160 EAFPSGPATSYVAG----KDTLLVGEDG---QSHITTGNMALAILDQLE 201

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 43.6 bits (103), Expect = 8e-06
 Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 6/61 (9%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            I V G AG IG  +   L  +    V V D+        L   +        + D  +
Sbjct: 6  WNICVVG-AGKIGQMIAALLKTSSNYSVTVADH----DLAALAV-LNRMGVATKQVDAKD 59

Query: 93 P 93
           
Sbjct: 60 E 60

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 46.2 bits (110), Expect = 9e-06
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 24  RFSKFFQSN-MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPR 82
           R S  F  + + + +TG  G +G  L  +L     +EVI +       +    K    P 
Sbjct: 138 RTSTLFDGSPLTVAITGSRGLVGRALTAQLQT-GGHEVIQL----VRKEPKPGKRFWDPL 192

Query: 83  FELIRHDVTEPLLIEVDQIYHLA 105
                      LL   D + HLA
Sbjct: 193 NPASD------LLDGADVLVHLA 209

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 42/225 (18%)

Query: 12  SASKPPPTPSPLRFSKFFQSNM-RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS 70
            +S      S  R + +FQ +M  +L+ G  G I  H++++L + +  +  +    F   
Sbjct: 2   GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTL----FARQ 57

Query: 71  KDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNV 125
              + K       ++I  DV         +   D +Y                 T +   
Sbjct: 58  PAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL--------------TGEDLD 102

Query: 126 IGTLNMLGLAKRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE 184
           I   +++   K     R++   +  +Y +    P     W N           +  R A 
Sbjct: 103 IQANSVIAAMKACDVKRLIFVLSLGIYDEV---PGKFVEWNNAVIGE----PLKPFRRAA 155

Query: 185 TLMFDYHRQHGIE---IRIARIFN--TYGPRMNIDDGRVVSNFIA 224
               D     G+E   +R A + +       +   +       ++
Sbjct: 156 ----DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVS 196

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 44/304 (14%), Positives = 85/304 (27%), Gaps = 80/304 (26%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
           N R+LVTG  G +G  +  +  +N  + V           + +              ++ 
Sbjct: 2   NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQV--------------NLL 47

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAK 136
           +   +           I H  C A                P    + NV  + N+   A 
Sbjct: 48  DSNAVHHIIHDFQPHVIVH--CAA------ERRPDVVENQPDAASQLNVDASGNLAKEAA 99

Query: 137 RVGARILLTSTSEVY---GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
            VGA ++  S+  V+     P    +D        P+ +   Y + K   E  + + +  
Sbjct: 100 AVGAFLIYISSDYVFDGTNPPYR-EEDI-----PAPLNL---YGKTKLDGEKAVLENNLG 150

Query: 194 HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR-----GEPLTVQAPGTQTRSFCYVS 248
             + +RI  ++                + +           +   +     Q R   +V 
Sbjct: 151 AAV-LRIPILYGEVEKLEE--------SAVTVMFDKVQFSNKSANMDH--WQQRFPTHVK 199

Query: 249 DMVDGLIRLMEGENTGPINIG-----NPGEFT-------MLELAENVKELINPNVEITMV 296
           D+     +L E     P   G        + T       + +        + P   IT  
Sbjct: 200 DVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRP---ITDS 256

Query: 297 ENTP 300
               
Sbjct: 257 PVLG 260

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 53/299 (17%), Positives = 92/299 (30%), Gaps = 44/299 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
             +L  G  G+    L   L   +   +I      + + D +   I     E +     E
Sbjct: 6   GTLLSFG-HGYTARVLSRALAP-QGWRIIGT----SRNPDQMEA-IRASGAEPLLWPGEE 58

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
           P L  V    HL    +P       +  +        + +         +   ST+ VYG
Sbjct: 59  PSLDGVT---HLLISTAPDSGGDPVLAALG-------DQIAARAAQFRWVGYLSTTAVYG 108

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
           D      DE+    + P   R       R        +     + + + R+   YGP   
Sbjct: 109 DHDGAWVDETTP--LTPTAARG------RWRVMAEQQWQAVPNLPLHVFRLAGIYGP--- 157

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI-NIGNP 271
              GR      ++  +G    +  P  Q  S  +V D+   L   M   + G + N+ + 
Sbjct: 158 ---GR---GPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD 210

Query: 272 GEFTMLELAENVKELIN----PNVEITMVENTPD----DPRQRKPDITKATELLGWEPK 322
                 ++     EL      P V+    + TP         ++    +  E LG   K
Sbjct: 211 EPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLK 269

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 22/174 (12%), Positives = 47/174 (27%), Gaps = 32/174 (18%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
            I + G AG I   L   L+      + +             + I H R  +I      P
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGR--QLKTRIPPEIIDHERVTVIEGSFQNP 64

Query: 94  LLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
             +E      + ++                     +     +++    R   R ++  + 
Sbjct: 65  GXLEQAVTNAEVVFV----------------GAMESGSDMASIVKALSRXNIRRVIGVSM 108

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIAR 202
                  +  +            +   Y +G+R A     +  R+  +   I R
Sbjct: 109 -----AGLSGEFPVALEKWTFDNLPISYVQGERQAR----NVLRESNLNYTILR 153

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 43.7 bits (102), Expect = 6e-05
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 31 SNM--RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
           +M   +L+  G+GF+   ++D L  N+   V V       +  N +        + I  
Sbjct: 20 RHMGKNVLL-LGSGFVAQPVIDTLAANDDINVTVACR----TLANAQALAKPSGSKAISL 74

Query: 89 DVTEP 93
          DVT+ 
Sbjct: 75 DVTDD 79

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 23/122 (18%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           M+I + G  G +G  L+  L   +                 + +   +   + +  DV  
Sbjct: 1   MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGA--------RKVEQVPQYNNVKAVHFDVDW 52

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT 145
                   L  +D I +++               +K ++ G + ++  A++    R +L 
Sbjct: 53  TPEEMAKQLHGMDAIINVSGSG--------GKSLLKVDLYGAVKLMQAAEKAEVKRFILL 104

Query: 146 ST 147
           ST
Sbjct: 105 ST 106

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 60/285 (21%), Positives = 105/285 (36%), Gaps = 73/285 (25%)

Query: 32  NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
             R+++TG  G +G  L ++L   E+ ++   D                 +  L   D+T
Sbjct: 5   KERVIITGANGQLGKQLQEEL-NPEEYDIYPFD-----------------KKLL---DIT 43

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLAK 136
               ++          I H  C A      Y                N IG  N+   ++
Sbjct: 44  NISQVQQVVQEIRPHIIIH--CAA------YTKVDQAEKERDLAYVINAIGARNVAVASQ 95

Query: 137 RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
            VGA+++  ST  V+        DE    N  PI +   Y   K   E  + + H ++ I
Sbjct: 96  LVGAKLVYISTDYVFQGDRPEGYDEF--HNPAPINI---YGASKYAGEQFVKELHNKYFI 150

Query: 197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR----GEPLTV---QAPGTQTRSFCYVSD 249
            +R + ++  YG           +NF+   IR     E ++V   Q  G+ T    YV+D
Sbjct: 151 -VRTSWLYGKYG-----------NNFVKTMIRLGKEREEISVVADQI-GSPT----YVAD 193

Query: 250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT 294
           +   + +L+     G  ++ N G  +  E A+ +    N  V + 
Sbjct: 194 LNVMINKLIHTSLYGTYHVSNTGSCSWFEFAKKIFSYANMKVNVL 238

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 7/44 (15%), Positives = 16/44 (36%)

Query: 20 PSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV 63
                  F   N  + + G +G  G  L+ +++E      + +
Sbjct: 6  ALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTL 49

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 21/132 (15%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
            +I + G  G  G   + + ++    EV V           L    G     ++  DV +
Sbjct: 4   KKIAIFGATGQTGLTTLAQAVQ-AGYEVTV----LVRDSSRLPS-EGPRPAHVVVGDVLQ 57

Query: 93  P-----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTS 146
                  +   D +  L           N +        G  N++   K  G  +++  +
Sbjct: 58  AADVDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACT 110

Query: 147 TSEVYGDPLVHP 158
           ++ +  DP   P
Sbjct: 111 SAFLLWDPTKVP 122

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292

 Score = 41.7 bits (99), Expect = 2e-04
 Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 74/286 (25%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
            +M+IL+TG  G +G  +  +L + +  EVI  D                   +L   D+
Sbjct: 11  HHMKILITGANGQLGREIQKQL-KGKNVEVIPTD-----------------VQDL---DI 49

Query: 91  TEPLLIE-------VDQIYHLACPASPIFYKY--------NPVKTIKTNVIGTLNMLGLA 135
           T  L +         + + +  C A      +              K N IG  N+   A
Sbjct: 50  TNVLAVNKFFNEKKPNVVIN--CAA------HTAVDKCEEQYDLAYKINAIGPKNLAAAA 101

Query: 136 KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 195
             VGA I+  ST  V+      P  E     VNP      Y + K   E  +   + ++ 
Sbjct: 102 YSVGAEIVQISTDYVFDGEAKEPITEF--DEVNPQSA---YGKTKLEGENFVKALNPKYY 156

Query: 196 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR----GEPLTV---QAPGTQTRSFCYVS 248
           I +R A +   YG       G    NF+   I      + L V   Q  GT T       
Sbjct: 157 I-VRTAWL---YGD------GN---NFVKTMINLGKTHDELKVVHDQV-GTPT----STV 198

Query: 249 DMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT 294
           D+   ++++++ +N G  +    G  +  + A  +  L   +V++T
Sbjct: 199 DLARVVLKVIDEKNYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVT 244

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 335

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 17/96 (17%)

Query: 80  HPRFELIRHDVTEP-----LLIEV--DQIYHLAC----PASPIFYKYNPVKTIKTNVIGT 128
               +    D+ +       +I+    ++Y+LA      AS  +    PV T   + +G 
Sbjct: 62  EGDIQYEDGDMADACSVQRAVIKAQPQEVYNLAAQSFVGAS--WN--QPVTTGVVDGLGV 117

Query: 129 LNMLGLAKRVG--ARILLTSTSEVYGDPLVHPQDES 162
            ++L   ++     R    STSE++G      QDE+
Sbjct: 118 THLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN 153

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 10/64 (15%)

Query: 30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRH 88
           +  R+L+ G  G  G HL+D+++      +VI             +    HPR +    
Sbjct: 3  STPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPAR---------KALAEHPRLDNPVG 53

Query: 89 DVTE 92
           + E
Sbjct: 54 PLAE 57

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV 63
          M I++TG  G +G+H+ ++ + N  +   + 
Sbjct: 1  MNIMLTGATGHLGTHITNQAIANHIDHFHIG 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	346
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.97
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.97
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.97
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.96
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.96
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.96
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.96
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.96
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.95
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.93
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.93
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.93
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.92
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.92
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.92
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.91
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.91
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.9
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.9
1spx_A	278	Short-chain reductase family member (5L265); paral	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.9
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.9
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.9
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.9
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.89
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.89
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.89
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.89
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.89
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.89
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.89
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.89
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.89
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.89
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.89
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.89
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.89
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.89
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.89
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.89
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.89
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.88
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.88
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.88
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.88
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.88
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.88
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.88
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.88
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.88
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.88
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.88
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.88
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.88
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.88
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.88
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.88
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.88
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.88
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.88
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.87
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.87
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.87
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.87
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.87
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.87
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.87
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.87
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.87
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.87
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.87
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.87
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.87
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.87
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.87
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.87
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.87
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.87
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.87
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.87
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.87
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.87
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.87
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.87
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.87
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.87
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.87
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.87
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.87
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.87
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.87
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.87
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.87
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.87
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.87
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.87
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.87
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.87
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.87
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.87
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.87
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.87
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.87
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.87
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.86
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.86
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.86
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.86
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.86
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.86
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.86
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.86
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.86
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.86
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.86
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.86
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.86
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.86
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.86
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.86
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.86
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.86
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.86
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.86
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.86
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.86
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.86
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.86
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.86
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.86
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.86
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.86
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.86
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.86
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.85
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.85
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.85
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.85
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.85
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.85
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.85
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.85
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.85
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.85
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.85
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.85
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.85
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.85
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.85
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.85
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.85
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.85
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.85
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.85
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.85
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.84
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.84
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.84
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.84
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.84
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.84
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.84
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.84
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.84
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.84
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.84
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.84
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.84
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.84
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.83
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.83
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.83
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.83
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.83
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.83
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.83
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.83
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.83
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.83
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.83
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.83
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.82
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.82
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.82
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.82
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.81
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.81
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.81
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.81
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.81
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.81
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.79
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.79
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.79
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.78
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.78
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.78
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.78
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.77
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.77
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.76
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.76
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.75
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.75
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.75
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.74
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.74
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.74
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.74
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.74
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.74
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.73
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.73
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.71
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.64
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.64
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.63
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.61
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.6
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.58
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.46
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.42
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.37
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.37
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.36
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.29
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.28
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.27
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.26
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.02
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.94
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.79
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.78
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.77
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.73
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.37
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.3
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.27
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.27
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.26
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.24
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.23
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.2
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.17
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.12
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.08
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.05
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.03
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.01
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.95
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.95
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.93
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.9
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.88
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.87
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.87
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.84
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.82
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.81
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.77
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.77
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.76
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.76
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.74
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.73
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.71
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.7
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.69
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.67
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	97.67
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.66
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.65
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.65
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.63
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.63
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.62
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.53
2yv3_A	331	Aspartate-semialdehyde dehydrogenase; aspartate pa	97.52
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.51
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.5
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.47
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.46
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.42
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.38
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.38
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.34
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.34
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.34
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.29
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.28
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.26
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.25
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.19
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.16
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.14
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.12
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.08
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.07
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.06
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.01
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.91
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.91
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	96.86
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.81
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.78
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.77
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	96.77
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	96.77
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.75
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.75
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.73
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.67
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	96.66
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.66
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.64
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.64
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	96.61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	96.61
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.6
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	96.6
4eye_A	342	Probable oxidoreductase; structural genomics, niai	96.56
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	96.54
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.53
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	96.53
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	96.52
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.5
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	96.5
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	96.49
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.45
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.41
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.4
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	96.39
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.38
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	96.38
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.36
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.33
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	96.31
1rm4_O	337	Glyceraldehyde 3-phosphate dehydrogenase A; rossma	96.28
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	96.25
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.25
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.25
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.25
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	96.23
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.2
1u8f_O	335	GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l	96.18
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.18
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.18
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.12
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.08
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.08
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	96.05
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.04
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.04
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.02
3gms_A	340	Putative NADPH:quinone reductase; structural genom	95.97
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	95.95
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.94
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.93
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	95.9
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	95.89
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	95.89
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	95.88
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.88
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.86
3b1j_A	339	Glyceraldehyde 3-phosphate dehydrogenase (NADP+);	95.86
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	95.73
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	95.72
1pjq_A	457	CYSG, siroheme synthase; rossman fold, nucleotide	95.71
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.7
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.69
1lnq_A	336	MTHK channels, potassium channel related protein;	95.66
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	95.66
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.65
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	95.63
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	95.61
1vm6_A	228	DHPR, dihydrodipicolinate reductase; TM1520, struc	95.58
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	95.51
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.51
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.49
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	95.48
2x5j_O	339	E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid	95.47
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.46
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	95.44
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	95.44
1b7g_O	340	Protein (glyceraldehyde 3-phosphate dehydrogenase;	95.42
4ezb_A	317	Uncharacterized conserved protein; structural geno	95.4
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.3
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.29
3e5r_O	337	PP38, glyceraldehyde-3-phosphate dehydrogenase, cy	95.28
2d2i_A	380	Glyceraldehyde 3-phosphate dehydrogenase; rossmann	95.25
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.22
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.2
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.19
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	95.18
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.17
3cps_A	354	Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, g	95.17
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	95.16
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	95.14
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	95.13
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	95.08
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	95.08
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.07
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.06
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	95.06
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	95.03
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	94.99
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	94.89
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	94.88
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	94.88
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	94.88
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.88
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	94.87

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=3.4e-49  Score=354.87  Aligned_cols=314  Identities=63%  Similarity=1.075  Sum_probs=268.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      .+|+|||||||||||++|+++|++.| ++|++++|...........+....+++++.+|+.+....++|+|||+|+....
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~~~  104 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP  104 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCC-CEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECccccCc
Confidence            46899999999999999999999999 99999999654433333344444678999999999888899999999997654


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHH
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY  190 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  190 (346)
                      .....++...+++|+.++.+++++|++.++||||+||..+|+.....+.+|+.+....+..|.+.|+.+|.++|.+++.+
T Consensus       105 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  184 (343)
T 2b69_A          105 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY  184 (343)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHH
Confidence            44556788899999999999999999988899999999999977777788886655556667788999999999999998


Q ss_pred             HHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          191 HRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       191 ~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      ++..+++++++||+.+|||+.......++..++.....++.+.++++++..++++|++|+|++++.+++.+..++||+++
T Consensus       185 ~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~i~~  264 (343)
T 2b69_A          185 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGN  264 (343)
T ss_dssp             HHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCEEESC
T ss_pred             HHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCCCCeEEecC
Confidence            88889999999999999998654445677888888888988888888888999999999999999999877788999999


Q ss_pred             CCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcCCCC
Q 019060          271 PGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAVPRK  345 (346)
Q Consensus       271 ~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~~~~  345 (346)
                      ++++|+.|+++.+.+.+|.+.++...+.....+....+|++|+++.|||+|+++++|+|+++++||+++....++
T Consensus       265 ~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~  339 (343)
T 2b69_A          265 PEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQAN  339 (343)
T ss_dssp             CCEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             CCCCcHHHHHHHHHHHhCCCCCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999888777666554455567789999999999999889999999999999887654443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=3.5e-49  Score=355.93  Aligned_cols=307  Identities=30%  Similarity=0.407  Sum_probs=261.9

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC------CCeeEEecccCCccc-----CC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH------PRFELIRHDVTEPLL-----IE   97 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~d~~~~~~-----~~   97 (346)
                      ..++|+|||||||||||++|+++|+++| ++|++++|...........+...      .++.++.+|+.+.+.     .+
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG  100 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence            3457899999999999999999999999 99999999765444443333221      579999999998753     37


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      +|+|||+|+.........++...+++|+.++.+++++|++.++ ||||+||.++|+.....+++|+     ++..|.+.|
T Consensus       101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y  175 (351)
T 3ruf_A          101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEE-----NIGNPLSPY  175 (351)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHH
T ss_pred             CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccC-----CCCCCCChh
Confidence            9999999997765566678889999999999999999999998 9999999999998877888888     577888999


Q ss_pred             HHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          177 DEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      +.+|..+|.+++.++++.+++++++||+++|||+.....  ..++..++..+..++.+.++++++..++|+|++|+|+++
T Consensus       176 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~  255 (351)
T 3ruf_A          176 AVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN  255 (351)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence            999999999999999888999999999999999865432  367888999999999999989999999999999999999


Q ss_pred             HHHHhCC---CCCcEEecCCCCCCHHHHHHHHHHHcCCC-----cceEEccCCCCCCCcccCChHHHHhhcCCcccccHH
Q 019060          255 IRLMEGE---NTGPINIGNPGEFTMLELAENVKELINPN-----VEITMVENTPDDPRQRKPDITKATELLGWEPKIKLR  326 (346)
Q Consensus       255 ~~~~~~~---~~~~~~~~~~~~~s~~ei~~~i~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~  326 (346)
                      +.++..+   .+++||+++++.+|+.|+++.+.+.+|..     ......+..........+|++|+++.|||+|+++++
T Consensus       256 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~  335 (351)
T 3ruf_A          256 ILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRPNIKIR  335 (351)
T ss_dssp             HHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCCCCCHH
T ss_pred             HHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCCCCCHH
Confidence            9999872   27799999999999999999999999983     333344444555567789999999999999999999


Q ss_pred             hHHHHHHHHHHHhhc
Q 019060          327 DGLPLMEDDFRLRLA  341 (346)
Q Consensus       327 e~i~~~~~~~~~~~~  341 (346)
                      ++|+++++||+++.+
T Consensus       336 ~~l~~~~~~~~~~~~  350 (351)
T 3ruf_A          336 EGLRLSMPWYVRFLK  350 (351)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhc
Confidence            999999999988753

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=7.3e-48  Score=346.61  Aligned_cols=303  Identities=26%  Similarity=0.423  Sum_probs=251.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC-CCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~v  101 (346)
                      .+|+|||||||||||++|+++|+++|. ++|++++|.. ......+......+++.++.+|+.+.+..       ++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V  102 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI  102 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence            468999999999999999999999983 4677777754 22333333334446899999999997543       49999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCCcCCCCCCCCCCchHHh
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      ||+|+.........++...+++|+.++.+++++|++.++ ||||+||..+|+.. ...+++|+     ++..|.+.|+.+
T Consensus       103 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~-----~~~~p~~~Y~~s  177 (346)
T 4egb_A          103 VNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEE-----TPLAPNSPYSSS  177 (346)
T ss_dssp             EECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTT-----SCCCCCSHHHHH
T ss_pred             EECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCC-----CCCCCCChhHHH
Confidence            999998765556677888999999999999999999988 79999999999976 45677777     677888999999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      |.++|.+++.++++.+++++++||+.+|||+...  ..++..++..+..++.+.++++++..++|+|++|+|++++.+++
T Consensus       178 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~  255 (346)
T 4egb_A          178 KASADMIALAYYKTYQLPVIVTRCSNNYGPYQYP--EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH  255 (346)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCc--cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence            9999999999998889999999999999998643  36788889999999999988889999999999999999999998


Q ss_pred             CCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          260 GEN-TGPINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       260 ~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      ++. +++||+++++++|+.|+++.+.+.+|.+.. +...+..+.......+|++|+++.|||+|+++++|+|+++++||+
T Consensus       256 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~  335 (346)
T 4egb_A          256 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQGLQETVQWYE  335 (346)
T ss_dssp             HCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence            776 569999999999999999999999998765 555555555556677899999999999999999999999999998


Q ss_pred             Hhh
Q 019060          338 LRL  340 (346)
Q Consensus       338 ~~~  340 (346)
                      ++.
T Consensus       336 ~~~  338 (346)
T 4egb_A          336 KNE  338 (346)
T ss_dssp             HCH
T ss_pred             hhh
Confidence            764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=7.1e-48  Score=341.60  Aligned_cols=291  Identities=24%  Similarity=0.341  Sum_probs=251.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      |+|+|||||||||||++|+++|+++| ++|++++|+. .... +      .+++++.+|+. .+.     .++|+|||+|
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~-~~~~-~------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a   70 (311)
T 3m2p_A            1 MSLKIAVTGGTGFLGQYVVESIKNDG-NTPIILTRSI-GNKA-I------NDYEYRVSDYT-LEDLINQLNDVDAVVHLA   70 (311)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCC-C------------CCEEEECCCC-HHHHHHHTTTCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCCC-Cccc-C------CceEEEEcccc-HHHHHHhhcCCCEEEEcc
Confidence            46899999999999999999999999 9999999972 2221 1      27889999998 532     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +.....    ++...++.|+.++.+++++|++.++ ||||+||..+|+.....+++|+     ++..|.+.|+.+|.++|
T Consensus        71 ~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E  141 (311)
T 3m2p_A           71 ATRGSQ----GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEK-----ELPLPDLMYGVSKLACE  141 (311)
T ss_dssp             CCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTT-----SCCCCSSHHHHHHHHHH
T ss_pred             ccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCC-----CCCCCCchhHHHHHHHH
Confidence            876533    6667789999999999999999998 7999999999998777888888     57788899999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-C
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T  263 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~  263 (346)
                      .+++.++.+.+++++++||+.+|||+....  .++..++..+..++.+.++++++..++++|++|+|++++.+++++. +
T Consensus       142 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~  219 (311)
T 3m2p_A          142 HIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVS  219 (311)
T ss_dssp             HHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCC
T ss_pred             HHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCC
Confidence            999999988899999999999999985432  6788899998999999988888899999999999999999999884 7


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC-CCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcC
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVEN-TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~  342 (346)
                      ++||+++++.+|+.|+++.+.+.+|.+..+...+. .........+|++|+++.|||+|+++++++|+++++||++....
T Consensus       220 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~  299 (311)
T 3m2p_A          220 GTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDV  299 (311)
T ss_dssp             EEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHHHCC----
T ss_pred             CeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHHHHhcccC
Confidence            89999999999999999999999999888887776 55666778899999999999999999999999999999776554

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=8.1e-48  Score=342.64  Aligned_cols=296  Identities=29%  Similarity=0.453  Sum_probs=258.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC---CCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---GSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ++|+|||||||||||++|+++|+++| ++|++++|...   .....+.......+++++.+|+.     ++|+|||+|+.
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~d~vi~~a~~   79 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASG-EEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----DVRLVYHLASH   79 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----TEEEEEECCCC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----cCCEEEECCcc
Confidence            47899999999999999999999999 99999999764   23333333334456778888877     68999999998


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ........++...++ |+.++.+++++|++.++ ||||+||..+|+.....+++|+     ++..|.+.|+.+|..+|.+
T Consensus        80 ~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  153 (321)
T 3vps_A           80 KSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPED-----SPLSPRSPYAASKVGLEMV  153 (321)
T ss_dssp             CCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             CChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHHHHH
Confidence            765555566666777 99999999999999997 9999999999998877788888     6777889999999999999


Q ss_pred             HHHHHHHhCC-ceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCc
Q 019060          187 MFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       187 ~~~~~~~~~~-~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      ++.++.++++ +++++||+.+|||+...  ..++..++..+..++.+.++++++..++++|++|+|++++.+++++..|+
T Consensus       154 ~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~g~  231 (321)
T 3vps_A          154 AGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLPSV  231 (321)
T ss_dssp             HHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCCSE
T ss_pred             HHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCCCe
Confidence            9999988899 99999999999998643  45788888888889989888888999999999999999999999887669


Q ss_pred             EEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcc-cccHHhHHHHHHHHHHHhhc
Q 019060          266 INIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP-KIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       266 ~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p-~~~~~e~i~~~~~~~~~~~~  341 (346)
                      ||+++++.+|+.|+++.+. .+|.+.++...+..+.......+|++|+++.|||+| +++++++|+++++||+++..
T Consensus       232 ~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~  307 (321)
T 3vps_A          232 VNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRDL  307 (321)
T ss_dssp             EEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred             EEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999 999998888888777777788999999999999999 77999999999999987653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=2.2e-46  Score=332.17  Aligned_cols=294  Identities=33%  Similarity=0.525  Sum_probs=246.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC---CCCEEEEcccCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---EVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---~~d~vi~~a~~~~  109 (346)
                      |+|||||||||||++|+++|+++| ++|++++|.........     ..++.++.+|+.+....   +.|+|||+|+...
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~d~vih~A~~~~   74 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELG-YEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYSWGAGIKGDVVFHFAANPE   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTTTTTTCCCSEEEECCSSCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCCchhhc-----CCCceEEECccccHHHHhhcCCCEEEECCCCCC
Confidence            799999999999999999999999 99999998654332221     35789999999987521   2399999999766


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                      ......++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     .+..|.+.|+.+|.++|.+++
T Consensus        75 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           75 VRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEE-----EPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHHHHH
T ss_pred             chhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCC-----CCCCCCChHHHHHHHHHHHHH
Confidence            5567788899999999999999999999987 8999999999998877788887     577788899999999999999


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC-CCeEEecCCcceeecccHHHHHHHHHHHHhC---C-C-
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG---E-N-  262 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~---~-~-  262 (346)
                      .++.+.+++++++||+++|||+..   ..++..++.....+ ..+.+.++++..++++|++|+|++++.++++   . . 
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~  226 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRLR---HGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAP  226 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTCC---SSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHhCCCEEEEeeccccCcCCC---CChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCC
Confidence            999888999999999999999754   35677777777776 5566778888999999999999999999987   2 2 


Q ss_pred             CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC------CCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHH
Q 019060          263 TGPINIGNPGEFTMLELAENVKELINPNVEITMVEN------TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       263 ~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~------~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      .++||+++++.+|+.|+++.+.+.+|.+..+...+.      .+.......+|++|+++.|||+|+++++|+|+++++||
T Consensus       227 ~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~  306 (312)
T 3ko8_A          227 FLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDL  306 (312)
T ss_dssp             EEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCSSCHHHHHHHHHHHH
T ss_pred             CcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence            678999999999999999999999998887776543      23344557789999999999999999999999999999


Q ss_pred             HHhh
Q 019060          337 RLRL  340 (346)
Q Consensus       337 ~~~~  340 (346)
                      +++.
T Consensus       307 ~~~~  310 (312)
T 3ko8_A          307 AKEL  310 (312)
T ss_dssp             HHHH
T ss_pred             Hhhh
Confidence            8764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-46  Score=336.14  Aligned_cols=305  Identities=22%  Similarity=0.338  Sum_probs=254.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC-------CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI-------EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-------~~d~v  101 (346)
                      ++|+|||||||||||++|+++|+++| ++|++++|.............  ...++.++.+|+.+.+..       ++|+|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v   82 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA   82 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCC-CcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence            46899999999999999999999999 999999997654433322221  134788999999987532       69999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      ||+|+..........+...++.|+.++.+++++|++.++ +||++||..+||.....+.+|+     .+..|.+.|+.+|
T Consensus        83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~Y~~sK  157 (341)
T 3enk_A           83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDET-----FPLSATNPYGQTK  157 (341)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTT-----SCCBCSSHHHHHH
T ss_pred             EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCC-----CCCCCCChhHHHH
Confidence            999998765556677888999999999999999999887 9999999999998777788888     5667888999999


Q ss_pred             HHHHHHHHHHHHHhC-CceEEEEeccccCCCCCC------C--CccHHHHHHHHHHcC-CCeEEec------CCcceeec
Q 019060          181 RVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNI------D--DGRVVSNFIAQAIRG-EPLTVQA------PGTQTRSF  244 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~-~~~~ivR~~~i~G~~~~~------~--~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~  244 (346)
                      .++|.+++.++.+.+ ++++++||+++|||+...      .  ...+++.+....... ..+.+++      +++..++|
T Consensus       158 ~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  237 (341)
T 3enk_A          158 LMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY  237 (341)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECE
T ss_pred             HHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEee
Confidence            999999999988775 999999999999996421      1  134555444433332 5566666      67888999


Q ss_pred             ccHHHHHHHHHHHHhC----CCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCc
Q 019060          245 CYVSDMVDGLIRLMEG----ENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWE  320 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~----~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~  320 (346)
                      +|++|+|++++.+++.    ..+++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+++.|||+
T Consensus       238 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~  317 (341)
T 3enk_A          238 IHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETIGWK  317 (341)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHHCCC
T ss_pred             EEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHcCCC
Confidence            9999999999999876    347899999999999999999999999999888888777777777889999999999999


Q ss_pred             ccccHHhHHHHHHHHHHHhhc
Q 019060          321 PKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       321 p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      |+++++|+|+++++||+++.+
T Consensus       318 p~~~l~~~l~~~~~~~~~~~~  338 (341)
T 3enk_A          318 AERDLERMCADHWRWQENNPR  338 (341)
T ss_dssp             CCCCHHHHHHHHHHHHHHSTT
T ss_pred             CCCCHHHHHHHHHHHHHhcCc
Confidence            999999999999999987654

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-46  Score=329.99  Aligned_cols=295  Identities=29%  Similarity=0.441  Sum_probs=242.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~a~  106 (346)
                      ||+|||||||||||++|+++|+++| +.|.+..|.. ......     ..++.++.+|+.+ ...     ++|+|||+|+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~-~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~   72 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSS-GNEEFV-----NEAARLVKADLAA-DDIKDYLKGAEEVWHIAA   72 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSS-CCGGGS-----CTTEEEECCCTTT-SCCHHHHTTCSEEEECCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCC-CChhhc-----CCCcEEEECcCCh-HHHHHHhcCCCEEEECCC
Confidence            3689999999999999999999999 7666655432 221111     3578999999998 433     7999999999


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      .........++...+++|+.++.+++++|++.++ +|||+||..+||.....+.+|+     .+..|.+.|+.+|..+|.
T Consensus        73 ~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           73 NPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPED-----YPTHPISLYGASKLACEA  147 (313)
T ss_dssp             CCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHHHHH
T ss_pred             CCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCC-----CCCCCCCHHHHHHHHHHH
Confidence            7655556778899999999999999999999887 8999999999998777788887     577788899999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC-CCeEEecCCcceeecccHHHHHHHHHHHHhCCC-C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~  263 (346)
                      +++.++.+.+++++++||+++|||+..   ..++..++.....+ ..+.++++++..++|+|++|+|++++.+++... +
T Consensus       148 ~~~~~~~~~g~~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~  224 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFANVIGRRST---HGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERV  224 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECSCEESTTCC---CSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSE
T ss_pred             HHHHHHHhcCCCEEEEeeccccCcCCC---cChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCC
Confidence            999999888999999999999999754   35677777777776 556677888899999999999999999998544 6


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC---CCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVEN---TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      ++||+++++++|+.|+++.+.+.+|.+..+...+.   .........+|++|++ .|||+|+++++|+|+++++||+++.
T Consensus       225 ~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~~~e~l~~~~~~~~~~~  303 (313)
T 3ehe_A          225 NIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLK-RLGWKPRYNSEEAVRMAVRDLVEDL  303 (313)
T ss_dssp             EEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHH-HHTCCCSCCHHHHHHHHHHHHHHHH
T ss_pred             ceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHhCc
Confidence            79999999999999999999999998877766542   2233345678999995 5999999999999999999999887


Q ss_pred             cCC
Q 019060          341 AVP  343 (346)
Q Consensus       341 ~~~  343 (346)
                      +..
T Consensus       304 ~~~  306 (313)
T 3ehe_A          304 DEE  306 (313)
T ss_dssp             HC-
T ss_pred             ccc
Confidence            654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=2.7e-46  Score=338.40  Aligned_cols=299  Identities=23%  Similarity=0.361  Sum_probs=248.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHh--cCCCeEEEEeCCCCCCc---------chhhhhcCCCCeeEEecccCCcc-----
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLME--NEKNEVIVVDNYFTGSK---------DNLRKWIGHPRFELIRHDVTEPL-----   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~--~g~~~V~~~~r~~~~~~---------~~~~~~~~~~~~~~~~~d~~~~~-----   94 (346)
                      .+|+|||||||||||++|+++|++  .| ++|++++|......         .... .....++.++.+|+.+..     
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPK-AKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTT-SEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCC-CeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCCCCHHHHHHh
Confidence            468999999999999999999999  89 99999999653100         1111 122346789999999864     


Q ss_pred             -cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           95 -LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        95 -~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                       ..++|+|||+||...  ....++...+++|+.++.+++++|++.+++|||+||.++||.... +.+|+     ++..|.
T Consensus        87 ~~~~~D~vih~A~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~-~~~E~-----~~~~p~  158 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSD--TTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKA-PNVVG-----KNESPE  158 (362)
T ss_dssp             TTSCCSEEEECCCCCG--GGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCS-SBCTT-----SCCCCS
T ss_pred             hccCCCEEEECCccCC--ccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCC-CCCCC-----CCCCCC
Confidence             347999999998654  356788999999999999999999999989999999999997665 78887     577888


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      +.|+.+|.++|.+++.++.+  ++++++||+++|||+.....  ..++..++..+..+..+.++++++..++++|++|+|
T Consensus       159 ~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  236 (362)
T 3sxp_A          159 NVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI  236 (362)
T ss_dssp             SHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHH
Confidence            99999999999999988655  88999999999999865432  267888888889998888878888899999999999


Q ss_pred             HHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC-CCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENT-PDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      ++++.+++.+..|+||+++++++|+.|+++.+.+.+| +.++...+.. ........+|++|+++.|||+|+++++++|+
T Consensus       237 ~ai~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~  315 (362)
T 3sxp_A          237 QANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPLYDLESGIK  315 (362)
T ss_dssp             HHHHHHTTCSSCEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHHHHHHhCCCCCCCHHHHHH
Confidence            9999999987777999999999999999999999999 7777666544 4455667889999999999999999999999


Q ss_pred             HHHHHHHHhhcC
Q 019060          331 LMEDDFRLRLAV  342 (346)
Q Consensus       331 ~~~~~~~~~~~~  342 (346)
                      ++++||++....
T Consensus       316 ~~~~~~~~~~~~  327 (362)
T 3sxp_A          316 DYLPHIHAIFKG  327 (362)
T ss_dssp             HHHHHHTCC---
T ss_pred             HHHHHHHHHhhc
Confidence            999999876543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=1.4e-45  Score=332.42  Aligned_cols=304  Identities=26%  Similarity=0.369  Sum_probs=251.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cC---CCCeeEEecccCCccc-----CCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IG---HPRFELIRHDVTEPLL-----IEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~~~d~~~~~~-----~~~d   99 (346)
                      .+|+|||||||||||++|+++|++.| ++|++++|........+...   +.   ..++.++.+|+.+...     .++|
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            46899999999999999999999999 99999999654332222211   10   2478999999998653     3799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      +|||+|+.........++...+++|+.++.+++++|++.++ +|||+||..+|+.....+.+|+     ++..|.+.|+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~-----~~~~~~~~Y~~  179 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYAV  179 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCC-----CCCCCCChhHH
Confidence            99999987654344567888999999999999999999887 8999999999997766677887     56677789999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|.++|.+++.++.+.+++++++||+.+|||+....  ...++..++..+..+.++.++++++..++++|++|+|++++.
T Consensus       180 sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~  259 (352)
T 1sb8_A          180 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  259 (352)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHH
Confidence            999999999999888899999999999999986433  235677788888888888888888889999999999999999


Q ss_pred             HHhCC---CCCcEEecCCCCCCHHHHHHHHHHHc---CCCcce--EEccCCCCCCCcccCChHHHHhhcCCcccccHHhH
Q 019060          257 LMEGE---NTGPINIGNPGEFTMLELAENVKELI---NPNVEI--TMVENTPDDPRQRKPDITKATELLGWEPKIKLRDG  328 (346)
Q Consensus       257 ~~~~~---~~~~~~~~~~~~~s~~ei~~~i~~~~---g~~~~~--~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~  328 (346)
                      ++...   .+++||+++++++|+.|+++.+.+.+   |.+...  ...+..+.......+|++|++++|||+|+++++|+
T Consensus       260 ~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~  339 (352)
T 1sb8_A          260 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAG  339 (352)
T ss_dssp             HHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHH
T ss_pred             HHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCCCCHHHH
Confidence            88762   26799999999999999999999999   877552  23333333445667899999999999998899999


Q ss_pred             HHHHHHHHHHhh
Q 019060          329 LPLMEDDFRLRL  340 (346)
Q Consensus       329 i~~~~~~~~~~~  340 (346)
                      |+++++||+++.
T Consensus       340 l~~~~~~~~~~~  351 (352)
T 1sb8_A          340 VALAMPWYIMFL  351 (352)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999998764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=1.2e-45  Score=327.41  Aligned_cols=293  Identities=30%  Similarity=0.467  Sum_probs=247.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+||||||+||||++++++|+++| ++|++++|........+     ..++.++.+|+.+.+..       ++|+|||+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a   74 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARG-LEVAVLDNLATGKRENV-----PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQA   74 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEECCCSSCCGGGS-----CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEECCCcCchhhc-----ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECc
Confidence            689999999999999999999999 99999988543222111     13678899999986432       699999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecc-cccCC-CCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS-EVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~-~v~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      +.........++...+++|+.++.+++++|++.++ |||++||. .+|+. ....+.+|+     ++..|...|+.+|.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~-----~~~~~~~~Y~~sK~~  149 (311)
T 2p5y_A           75 AQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEET-----WPPRPKSPYAASKAA  149 (311)
T ss_dssp             SCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTT-----SCCCCCSHHHHHHHH
T ss_pred             cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCC-----CCCCCCChHHHHHHH
Confidence            87654445567888999999999999999999887 99999999 89986 445567776     466677899999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEe-----cCCcceeecccHHHHHHHHHH
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQ-----APGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|.+++.++++.+++++++||+++|||+..... ..+++.++..+..+.++.++     +++...++|+|++|+|++++.
T Consensus       150 ~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  229 (311)
T 2p5y_A          150 FEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHAL  229 (311)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHH
Confidence            999999998888999999999999999765432 35677778888888888777     777788999999999999999


Q ss_pred             HHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHH
Q 019060          257 LMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      +++.+ ++.||+++++.+|+.|+++.+.+.+|.+.++...+..+.......+|++|+++ |||+|+++++|+++++++||
T Consensus       230 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lg~~p~~~~~~~l~~~~~~~  307 (311)
T 2p5y_A          230 ALFSL-EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPRPGDLERSVLSPLKLMA-HGWRPKVGFQEGIRLTVDHF  307 (311)
T ss_dssp             HHHHC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCCTTCCSBCCBCCHHHHT-TTCCCSSCHHHHHHHHHHHH
T ss_pred             HHhCC-CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCCccchhhccCCHHHHHH-CCCCCCCCHHHHHHHHHHHH
Confidence            99876 78999999999999999999999999888777666555555677889999999 99999999999999999999


Q ss_pred             HH
Q 019060          337 RL  338 (346)
Q Consensus       337 ~~  338 (346)
                      ++
T Consensus       308 ~~  309 (311)
T 2p5y_A          308 RG  309 (311)
T ss_dssp             HT
T ss_pred             Hh
Confidence            65

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=2e-46  Score=337.41  Aligned_cols=292  Identities=24%  Similarity=0.298  Sum_probs=247.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      ..+|+|||||||||||++|+++|+++| ++|++++|....           .++.++.+|+.+...     .++|+|||+
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   84 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQG-RTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHL   84 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTT-CCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCC-CEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence            357899999999999999999999999 999999996432           467899999998753     379999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCC--CCCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD--PLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~--~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      |+.....  .......+++|+.++.+++++|++.++ ||||+||..+|+.  ....+++|+     ++..|.+.|+.+|.
T Consensus        85 A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~-----~~~~~~~~Y~~sK~  157 (347)
T 4id9_A           85 GAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTED-----HPLCPNSPYGLTKL  157 (347)
T ss_dssp             CCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTT-----SCCCCCSHHHHHHH
T ss_pred             CcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCC-----CCCCCCChHHHHHH
Confidence            9876532  233478899999999999999999988 9999999999997  556677787     57778889999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEecccc-------------CCCCCCC---------CccHHHHHHHHHHcCCCeEEecCCc
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTY-------------GPRMNID---------DGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~-------------G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                      ++|.+++.+++..+++++++||+.+|             ||+....         ...++..++.....+.++.++++++
T Consensus       158 ~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  237 (347)
T 4id9_A          158 LGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNE  237 (347)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECT
T ss_pred             HHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCC
Confidence            99999999998889999999999999             7753321         1456777888888898888888888


Q ss_pred             ceeec----ccHHHHHHHHHHHHhCCC--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHH
Q 019060          240 QTRSF----CYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA  313 (346)
Q Consensus       240 ~~~~~----v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~  313 (346)
                      ..++|    +|++|+|++++.+++++.  +++||+++++++|+.|+++.+.+.+|.+..+...+..+.   ...+|++|+
T Consensus       238 ~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~---~~~~d~~k~  314 (347)
T 4id9_A          238 NGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGDGV---YYHTSNERI  314 (347)
T ss_dssp             TCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSCCC---BCCBCCHHH
T ss_pred             cccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCccc---ccccCHHHH
Confidence            88899    999999999999999874  779999999999999999999999999877765554332   678899999


Q ss_pred             HhhcCCcccccHHhHHHHHHHHHHHhhcCC
Q 019060          314 TELLGWEPKIKLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       314 ~~~lg~~p~~~~~e~i~~~~~~~~~~~~~~  343 (346)
                      ++.|||+|+++++++|+++++||+++....
T Consensus       315 ~~~lG~~p~~~~~~~l~~~~~~~~~~~~~~  344 (347)
T 4id9_A          315 RNTLGFEAEWTMDRMLEEAATARRQRLAKE  344 (347)
T ss_dssp             HHHHCCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999887653

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=8.4e-47  Score=342.98  Aligned_cols=305  Identities=28%  Similarity=0.481  Sum_probs=250.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccC-CcccC-----CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT-EPLLI-----EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~-----~~d~vi~  103 (346)
                      ++|+|||||||||||++|+++|+++ | ++|++++|+....    ......++++++.+|+. +....     ++|+|||
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQTDRL----GDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESCCTTT----GGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCChhhh----hhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence            4689999999999999999999999 8 9999999965322    22233468999999999 75433     6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCC-CC-CCCCCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK~  181 (346)
                      +|+...+.....++...+++|+.++.+++++|++.+.||||+||.++||.....+++|+..+.. .+ ..|.+.|+.+|.
T Consensus        98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~  177 (372)
T 3slg_A           98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQ  177 (372)
T ss_dssp             CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHH
Confidence            9998776556678889999999999999999999888999999999999877777777743210 11 146668999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCC------CCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      ++|.+++.++.. +++++++||+++|||+...      ....++..++..+..++.+.++++++..++|+|++|+|++++
T Consensus       178 ~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  256 (372)
T 3slg_A          178 LMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALM  256 (372)
T ss_dssp             HHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHH
Confidence            999999999877 9999999999999998642      124578889999999999999888889999999999999999


Q ss_pred             HHHhCC----CCCcEEecCC-CCCCHHHHHHHHHHHcCCCcceEEccCC---------------CCCCCcccCChHHHHh
Q 019060          256 RLMEGE----NTGPINIGNP-GEFTMLELAENVKELINPNVEITMVENT---------------PDDPRQRKPDITKATE  315 (346)
Q Consensus       256 ~~~~~~----~~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~~~~~~~---------------~~~~~~~~~~~~k~~~  315 (346)
                      .+++++    .+++||++++ +.+|+.|+++.+.+.+|.+..+...+..               ........+|++|+++
T Consensus       257 ~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~  336 (372)
T 3slg_A          257 KIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQ  336 (372)
T ss_dssp             HHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-------------CCCCBCCHHHHH
T ss_pred             HHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeeccccccccCCccccceeecCHHHHHH
Confidence            999875    3679999994 8999999999999999976543221110               0234456789999999


Q ss_pred             hcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          316 LLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       316 ~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      .|||+|+++++++|+++++||+++..
T Consensus       337 ~lG~~p~~~l~e~l~~~~~~~~~~~~  362 (372)
T 3slg_A          337 ELGWAPQFTFDDALRQIFEAYRGHVA  362 (372)
T ss_dssp             HHTCCCCCCHHHHHHHHHHHHTTCHH
T ss_pred             HcCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999977643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.6e-46  Score=330.14  Aligned_cols=297  Identities=23%  Similarity=0.270  Sum_probs=247.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIY  102 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi  102 (346)
                      .++|+|||||||||||++|+++|+++| +      +..  ..        ...+..+.+|+.+.+..       ++|+||
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~------~~~--~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi   66 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGA-G------LPG--ED--------WVFVSSKDADLTDTAQTRALFEKVQPTHVI   66 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTT-C------CTT--CE--------EEECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcC-C------ccc--cc--------ccccCceecccCCHHHHHHHHhhcCCCEEE
Confidence            357899999999999999999999999 6      110  00        12345567888886432       499999


Q ss_pred             EcccCCCc-cccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC-chHHh
Q 019060          103 HLACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEG  179 (346)
Q Consensus       103 ~~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~s  179 (346)
                      |+|+.... .....++...+++|+.++.+++++|++.++ ||||+||.++|+.....+++|+.+.. .+..|.. .|+.+
T Consensus        67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~s  145 (319)
T 4b8w_A           67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHN-GPPHNSNFGYSYA  145 (319)
T ss_dssp             ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGB-SCCCSSSHHHHHH
T ss_pred             ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCcccccccc-CCCCCCcchHHHH
Confidence            99997542 235578888999999999999999999998 89999999999988888888885322 1445545 59999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHH----HHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQ----AIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      |.++|.+++.++++.+++++++||+++|||+....  ...+++.++..    +..+..+.++++++..++|+|++|+|++
T Consensus       146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  225 (319)
T 4b8w_A          146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL  225 (319)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHH
Confidence            99999999999988899999999999999986532  24566666666    7889999998999999999999999999


Q ss_pred             HHHHHhCCC---CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          254 LIRLMEGEN---TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       254 i~~~~~~~~---~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      ++.+++++.   +++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+++.|||.|.++++|+|+
T Consensus       226 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~~~~l~  305 (319)
T 4b8w_A          226 FIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSKLRTYLPDFRFTPFKQAVK  305 (319)
T ss_dssp             HHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBCCHHHHHHCTTCCCCCHHHHHH
T ss_pred             HHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCCHHHHHHhcCCCCCCCHHHHHH
Confidence            999998743   45899999999999999999999999998888877666666677899999999999999999999999


Q ss_pred             HHHHHHHHhhcCCC
Q 019060          331 LMEDDFRLRLAVPR  344 (346)
Q Consensus       331 ~~~~~~~~~~~~~~  344 (346)
                      ++++||+++...+|
T Consensus       306 ~~~~~~~~~~~~~r  319 (319)
T 4b8w_A          306 ETCAWFTDNYEQAR  319 (319)
T ss_dssp             HHHHHHHHSCSSCC
T ss_pred             HHHHHHHHHHhhcC
Confidence            99999998876654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=7.5e-45  Score=325.63  Aligned_cols=301  Identities=29%  Similarity=0.427  Sum_probs=246.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC-CCeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE-KNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g-~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~  104 (346)
                      +|+|||||||||||++|+++|+++| .++|++++|... ...+.+.......++.++.+|+.+....     ++|+|||+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            5899999999999999999999996 289999998642 2222332222235789999999987543     69999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |+.........++...+++|+.++.+++++|.+.+.  ||||+||..+||.....+++|+     ++..+.+.|+.+|.+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK~~  157 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEN-----DRLMPSSPYSATKAA  157 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTT-----BCCCCCSHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCC-----CCCCCCCccHHHHHH
Confidence            997654344567888999999999999999998764  9999999999997666677777     466677899999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      +|.+++.++.+.+++++++||+.+|||....  ..++..++..+..+..+.++++++..++++|++|+|++++.+++.+.
T Consensus       158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  235 (336)
T 2hun_A          158 SDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE  235 (336)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            9999999988889999999999999997532  35677788888888888888888888999999999999999998665


Q ss_pred             -CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHh
Q 019060          263 -TGPINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       263 -~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                       +++||+++++.+|+.|+++.+.+.+|.+.+ +...+..+.......+|++|++++|||+|+++++++|+++++||+++
T Consensus       236 ~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~  314 (336)
T 2hun_A          236 SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKN  314 (336)
T ss_dssp             TTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence             569999999999999999999999998653 44444333333456789999999999999999999999999999875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=3.4e-45  Score=327.03  Aligned_cols=303  Identities=24%  Similarity=0.382  Sum_probs=248.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~  104 (346)
                      ||+|||||||||||++|+++|+++| ++|++++|........    +. .++.++.+|+.+.+..       ++|+|||+
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~----~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~   74 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEG-LSVVVVDNLQTGHEDA----IT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHF   74 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGG----SC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCCCcCchhh----cC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            3799999999999999999999999 9999999865332221    11 2688999999986432       69999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      |+.........++...+++|+.++.+++++|++.++ +|||+||..+|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        75 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~  149 (330)
T 2c20_A           75 AADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEE-----TMTNPTNTYGETKLAI  149 (330)
T ss_dssp             CCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTT-----SCCCCSSHHHHHHHHH
T ss_pred             CcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcC-----CCCCCCChHHHHHHHH
Confidence            987654444567888999999999999999999887 8999999999997766778887     5667778999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCC-------CCccHHHHHHHHHHc-CCCeEEec------CCcceeecccHHH
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIR-GEPLTVQA------PGTQTRSFCYVSD  249 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~v~v~D  249 (346)
                      |.+++.++++.+++++++||+++|||+...       ....+++.++..... +..+.+++      +++..++|+|++|
T Consensus       150 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D  229 (330)
T 2c20_A          150 EKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED  229 (330)
T ss_dssp             HHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred             HHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence            999999988889999999999999996321       123456666554443 34566665      5678899999999


Q ss_pred             HHHHHHHHHhCC----CCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccc-c
Q 019060          250 MVDGLIRLMEGE----NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKI-K  324 (346)
Q Consensus       250 va~~i~~~~~~~----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~  324 (346)
                      +|++++.+++++    ..++||+++++++|+.|+++.+.+.+|.+.++...+..........+|++|+++.|||+|++ +
T Consensus       230 va~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~  309 (330)
T 2c20_A          230 LVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVN  309 (330)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECCCSSCCSEECBCCHHHHHHHCCCCSCCC
T ss_pred             HHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCCcccccccCHHHHHHHhCCCCccCC
Confidence            999999988753    25799999999999999999999999988777766655555566788999999999999998 9


Q ss_pred             HHhHHHHHHHHHHHhhcCCCC
Q 019060          325 LRDGLPLMEDDFRLRLAVPRK  345 (346)
Q Consensus       325 ~~e~i~~~~~~~~~~~~~~~~  345 (346)
                      ++++++++++||+++....+|
T Consensus       310 l~~~l~~~~~~~~~~~~~~~~  330 (330)
T 2c20_A          310 VKTIIEHAWNWHQKQPNGYEK  330 (330)
T ss_dssp             HHHHHHHHHHHHHHCSSCCCC
T ss_pred             HHHHHHHHHHHHHHhhhccCC
Confidence            999999999999887655443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=8e-45  Score=327.02  Aligned_cols=299  Identities=26%  Similarity=0.370  Sum_probs=246.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCC-CcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      +|+|||||||||||++|+++|+++  | ++|++++|.... ....+... ...++.++.+|+.+...     .++|+|||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPD-VHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAAKADAIVH   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTT-CEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCC-CEEEEEeCCCCCCChhHHhhh-ccCCeEEEECCCCCHHHHHHHhhcCCEEEE
Confidence            479999999999999999999999  7 999999986422 22222222 23578999999998753     36899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCC------------CCCCCCCcCCCCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLV------------HPQDESYWGNVNPIG  171 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~------------~~~~e~~~~~~~~~~  171 (346)
                      +|+.........++...+++|+.++.+++++|.+.+++|||+||..+||....            .+++|+     ++..
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~-----~~~~  156 (348)
T 1oc2_A           82 YAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE-----TNYN  156 (348)
T ss_dssp             CCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT-----SCCC
T ss_pred             CCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCC-----CCCC
Confidence            99876543445677889999999999999999998889999999999986432            455665     5666


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      |.+.|+.+|..+|.+++.++.+.+++++++||+.+|||+...  ..++..++.....+..+.++++++..++++|++|+|
T Consensus       157 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  234 (348)
T 1oc2_A          157 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHI--EKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS  234 (348)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCT--TSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCc--cchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence            778999999999999999988889999999999999998532  356777888888888888888888889999999999


Q ss_pred             HHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccCCCCCCCcccCChHHHHhhcCCccccc-HHhH
Q 019060          252 DGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKIK-LRDG  328 (346)
Q Consensus       252 ~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~-~~e~  328 (346)
                      ++++.+++.+. +++||+++++++|+.|+++.+.+.+|.+.. +...+..+.......+|++|+++.|||+|+++ ++++
T Consensus       235 ~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~  314 (348)
T 1oc2_A          235 TGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEG  314 (348)
T ss_dssp             HHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHH
T ss_pred             HHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHcCCCCCCCcHHHH
Confidence            99999998665 569999999999999999999999998753 44444333333456789999999999999988 9999


Q ss_pred             HHHHHHHHHHh
Q 019060          329 LPLMEDDFRLR  339 (346)
Q Consensus       329 i~~~~~~~~~~  339 (346)
                      ++++++||+++
T Consensus       315 l~~~~~~~~~~  325 (348)
T 1oc2_A          315 LEETIQWYTDN  325 (348)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHHHHHh
Confidence            99999999765

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-45  Score=326.25  Aligned_cols=307  Identities=20%  Similarity=0.237  Sum_probs=246.1

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc-chhhhhcCCCCeeEEecccCCcccC-------CCCE
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLI-------EVDQ  100 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~  100 (346)
                      ..++|+|||||||||||++|+++|+++| ++|++++|...... ..+.......++.++.+|+.+.+..       ++|+
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            3458999999999999999999999999 99999999654321 1122111234688999999986532       4799


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      |||+|+.........++...+++|+.++.+++++|++.++  +|||+||.++|+.....+++|+     ++..|.+.|+.
T Consensus        90 Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~  164 (335)
T 1rpn_A           90 VYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGV  164 (335)
T ss_dssp             EEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHH
T ss_pred             EEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcc-----cCCCCCChhHH
Confidence            9999997654444667888999999999999999999873  8999999999997766677887     56677789999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|.++|.+++.++.+.+++++++||+.+|||+..... ...+..++..+..++. ...+++++..++|+|++|+|++++.
T Consensus       165 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~  244 (335)
T 1rpn_A          165 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL  244 (335)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence            9999999999998888999999999999999754321 2335566666677764 3455778889999999999999999


Q ss_pred             HHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcc--eEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          257 LMEGENTGPINIGNPGEFTMLELAENVKELINPNVE--ITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~--~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      +++++..++||+++++++|+.|+++.+.+.+|.+..  +...+  ..+.......+|++|++++|||+|+++++|+|+++
T Consensus       245 ~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~  324 (335)
T 1rpn_A          245 MLQQDKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMM  324 (335)
T ss_dssp             HHHSSSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHH
T ss_pred             HHhcCCCCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCCCHHHHHHHH
Confidence            998877899999999999999999999999998642  22221  12233345678999999999999999999999999


Q ss_pred             HHHHHHhhc
Q 019060          333 EDDFRLRLA  341 (346)
Q Consensus       333 ~~~~~~~~~  341 (346)
                      ++||+++.+
T Consensus       325 ~~~~~~~~~  333 (335)
T 1rpn_A          325 VEADLRRVS  333 (335)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhc
Confidence            999988764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=6.8e-45  Score=323.86  Aligned_cols=292  Identities=26%  Similarity=0.350  Sum_probs=243.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIY  102 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi  102 (346)
                      ..+|+|||||||||||++|+++|+++| ++|++++|.... . .    +   ++.++.+|+.+....       ++|+||
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~-~-~----l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   79 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQN-VEVFGTSRNNEA-K-L----P---NVEMISLDIMDSQRVKKVISDIKPDYIF   79 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCTTC-C-C----T---TEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCC-CEEEEEecCCcc-c-c----c---eeeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            457899999999999999999999999 999999996533 1 1    1   688999999987532       389999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccCCC--CCCCCCCCCcCCCCCCCCCCchHH
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDP--LVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~~~--~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      |+|+.........++...+++|+.++.+++++|++. ++ ||||+||..+|+..  ...+++|+     ++..|.+.|+.
T Consensus        80 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~-----~~~~~~~~Y~~  154 (321)
T 2pk3_A           80 HLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEE-----NQLRPMSPYGV  154 (321)
T ss_dssp             ECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTT-----SCCBCCSHHHH
T ss_pred             EcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCC-----CCCCCCCccHH
Confidence            999976654456688899999999999999999876 45 99999999999875  56677777     56667789999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHc---C--CCeEEecCCcceeecccHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR---G--EPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      +|.++|.+++.++.+.+++++++||+++|||+...  ..++..++..+..   |  ..+...++++..++++|++|+|++
T Consensus       155 sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a  232 (321)
T 2pk3_A          155 SKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL--GFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQA  232 (321)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC--CchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHH
Confidence            99999999999988889999999999999998543  3456666666665   6  567777788888999999999999


Q ss_pred             HHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      ++.+++.+. +++||+++++.+|+.|+++.+.+.+|.+..+...+  ..+.......+|++|+++.|||+|+++++|+|+
T Consensus       233 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~  312 (321)
T 2pk3_A          233 YWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLF  312 (321)
T ss_dssp             HHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHHHHHH
T ss_pred             HHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHHHHHH
Confidence            999998765 67999999999999999999999999887766555  233334567889999999999999999999999


Q ss_pred             HHHHHHHH
Q 019060          331 LMEDDFRL  338 (346)
Q Consensus       331 ~~~~~~~~  338 (346)
                      ++++||++
T Consensus       313 ~~~~~~~~  320 (321)
T 2pk3_A          313 EILQSYRQ  320 (321)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhc
Confidence            99999965

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=2e-45  Score=334.37  Aligned_cols=305  Identities=28%  Similarity=0.416  Sum_probs=242.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .+|+|||||||||||++|+++|++.|.++|++++|........+.   ...++.++.+|+.+.+.     .++|+|||+|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A  107 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHLA  107 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEECC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEECC
Confidence            468999999999999999999999976799999986543222221   23578999999998642     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccccCCCCCCCCC--CCCcCCCCCC-CCCCchHHhH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVYGDPLVHPQD--ESYWGNVNPI-GVRSCYDEGK  180 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~~~~~~~~~~--e~~~~~~~~~-~~~~~Y~~sK  180 (346)
                      +.........++...+++|+.++.+++++|++. ++ +|||+||..+|+.....+++  |+.+.  .+. .|.+.|+.+|
T Consensus       108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~--~~~~~~~~~Y~~sK  185 (377)
T 2q1s_A          108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDI--VSLHNNDSPYSMSK  185 (377)
T ss_dssp             CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCC--CCSSCCCSHHHHHH
T ss_pred             CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCccccccc--ccccCCCCchHHHH
Confidence            876544445678889999999999999999998 77 99999999999976665677  76321  144 6678899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCC---------CCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRM---------NIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      .++|.+++.++...+++++++||+.+|||..         ....  ..++..++..+..+.++.++++++..++++|++|
T Consensus       186 ~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D  265 (377)
T 2q1s_A          186 IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVED  265 (377)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHH
Confidence            9999999999888899999999999999975         2110  3567888888888888877777888999999999


Q ss_pred             HHHH-HHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCC-cccCChHHHHhhcCCcccccHHh
Q 019060          250 MVDG-LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPR-QRKPDITKATELLGWEPKIKLRD  327 (346)
Q Consensus       250 va~~-i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~~~~k~~~~lg~~p~~~~~e  327 (346)
                      +|++ ++.+++.+..|+||+++++++|+.|+++.+.+.+|.+..+...+..+.... ...+|++|++++|||+|+++++|
T Consensus       266 va~a~i~~~~~~~~~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e  345 (377)
T 2q1s_A          266 VANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELGFSADVSIDD  345 (377)
T ss_dssp             HHHHHHHHHHHCCTTEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHHCCCCCCCHHH
T ss_pred             HHHHHHHHHHhcCCCCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCCccccccccccCHHHHHHHcCCCCCCCHHH
Confidence            9999 999998766569999999999999999999999998776655543333344 67789999999999999989999


Q ss_pred             HHHHHHHHHHHhh
Q 019060          328 GLPLMEDDFRLRL  340 (346)
Q Consensus       328 ~i~~~~~~~~~~~  340 (346)
                      +|+++++||+++.
T Consensus       346 ~l~~~~~~~~~~~  358 (377)
T 2q1s_A          346 GLRKTIEWTKANL  358 (377)
T ss_dssp             HHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.3e-44  Score=322.56  Aligned_cols=300  Identities=29%  Similarity=0.433  Sum_probs=248.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-C-C---CeEEEEeCCCCC-CcchhhhhcCCCCeeEEecccCCccc-----CCCCEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-E-K---NEVIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQI  101 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-g-~---~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~v  101 (346)
                      |+|||||||||||++|+++|+++ + .   ++|++++|.... ....+.......++.++.+|+.+...     .++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            68999999999999999999996 4 2   789999986422 22233222223578999999998643     379999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      ||+|+.........++...+++|+.++.+++++|++.++ ||||+||.++||.....+++|+     ++..|.+.|+.+|
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASK  155 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHHH
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCC-----CCCCCCCchHHHH
Confidence            999987654344567788999999999999999999987 9999999999987655667776     5667778999999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      .++|.+++.++.+.+++++++||+.+|||+...  ..++..++.....+..+.++++++..++++|++|+|++++.++++
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  233 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG  233 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhC
Confidence            999999999988889999999999999998532  456777888888888888888888889999999999999999986


Q ss_pred             CC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHH
Q 019060          261 EN-TGPINIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       261 ~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~  338 (346)
                      +. +++||+++++++|+.|+++.+.+.+|.+.. +...+..+.......+|++|++++|||+|+++++++++++++||++
T Consensus       234 ~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~  313 (337)
T 1r6d_A          234 GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRE  313 (337)
T ss_dssp             CCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHh
Confidence            65 569999999999999999999999998753 4444433333344568999999999999999999999999999976


Q ss_pred             h
Q 019060          339 R  339 (346)
Q Consensus       339 ~  339 (346)
                      +
T Consensus       314 ~  314 (337)
T 1r6d_A          314 N  314 (337)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=1.2e-44  Score=325.84  Aligned_cols=304  Identities=24%  Similarity=0.354  Sum_probs=247.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------Ccchhhhhc--CCCCeeEEecccCCcccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------SKDNLRKWI--GHPRFELIRHDVTEPLLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------~~~~~~~~~--~~~~~~~~~~d~~~~~~~------   96 (346)
                      |+|+|||||||||||++|+++|++.| ++|++++|....      ..+....+.  ...++.++.+|+.+.+..      
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence            46899999999999999999999999 999999986432      222222211  124688999999986432      


Q ss_pred             -CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-C
Q 019060           97 -EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-R  173 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~  173 (346)
                       ++|+|||+|+.........++...+++|+.++.+++++|++.++ +|||+||..+|+.....+++|+     ++..| .
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~-----~~~~p~~  154 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEA-----HPTGGCT  154 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCS
T ss_pred             cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCC-----CCCCCCC
Confidence             69999999987654444567888999999999999999999887 8999999999997767778887     45555 6


Q ss_pred             CchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCC------CC--CccHHHHHHHHHH-cCCCeEEec------
Q 019060          174 SCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMN------ID--DGRVVSNFIAQAI-RGEPLTVQA------  236 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~------~~--~~~~~~~~~~~~~-~~~~~~~~~------  236 (346)
                      +.|+.+|..+|.+++.++.. +  ++++++||+++|||+..      ..  ...++..++.... .+..+.+++      
T Consensus       155 ~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (348)
T 1ek6_A          155 NPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             CchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCC
Confidence            88999999999999998876 5  99999999999999531      11  1346666666666 566777766      


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCC--C-C-CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHH
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGE--N-T-GPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITK  312 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~--~-~-~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k  312 (346)
                      +++..++|+|++|+|++++.+++++  . + ++||+++++++|+.|+++.+.+.+|.+.++...+..........+|++|
T Consensus       234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k  313 (348)
T 1ek6_A          234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSL  313 (348)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHH
T ss_pred             CCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHH
Confidence            5678899999999999999998764  2 3 6999999999999999999999999887777666555555567889999


Q ss_pred             HHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          313 ATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       313 ~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +++.|||+|+++++++++++++||+++..
T Consensus       314 ~~~~lG~~p~~~l~~~l~~~~~w~~~~~~  342 (348)
T 1ek6_A          314 AQEELGWTAALGLDRMCEDLWRWQKQNPS  342 (348)
T ss_dssp             HHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHhccc
Confidence            99999999999999999999999987643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=4e-44  Score=325.97  Aligned_cols=301  Identities=26%  Similarity=0.376  Sum_probs=248.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      ++|+|||||||||||++|+++|+++| ++|++++|........     ...++.++.+|+.+.+.     .++|+|||+|
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A  101 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLA  101 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCC-CeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhCCCCEEEECc
Confidence            46899999999999999999999999 9999999965332211     12468899999998643     3799999999


Q ss_pred             cCCCcccc-ccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-----CCCCCCCcCCCCCCCCCCchHH
Q 019060          106 CPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-----HPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       106 ~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~-----~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      +....... ..++...+++|+.++.+++++|++.++ +|||+||..+|+....     .+++|+.+   .+..|.+.|+.
T Consensus       102 ~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~---~~~~~~~~Y~~  178 (379)
T 2c5a_A          102 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDA---WPAEPQDAFGL  178 (379)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG---SSBCCSSHHHH
T ss_pred             eecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccC---CCCCCCChhHH
Confidence            87643222 567888999999999999999999887 9999999999985332     23555532   14556788999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      +|.++|.+++.++++.+++++++||+.+|||+.....  ..++..++..+..+.. +.++++++..++++|++|+|++++
T Consensus       179 sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~  258 (379)
T 2c5a_A          179 EKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVL  258 (379)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHH
Confidence            9999999999998888999999999999999754322  2367778888777776 777788888899999999999999


Q ss_pred             HHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHH
Q 019060          256 RLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDD  335 (346)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~  335 (346)
                      .+++.+..++||+++++.+|+.|+++.+.+.+|.+.++...+... ......+|++|+++.|||+|+++++++|+++++|
T Consensus       259 ~~l~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~  337 (379)
T 2c5a_A          259 RLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW  337 (379)
T ss_dssp             HHHHSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-CCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHH
T ss_pred             HHhhccCCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-CcccccCCHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence            999877788999999999999999999999999887776655432 3445678999999999999999999999999999


Q ss_pred             HHHhhc
Q 019060          336 FRLRLA  341 (346)
Q Consensus       336 ~~~~~~  341 (346)
                      |+++..
T Consensus       338 ~~~~~~  343 (379)
T 2c5a_A          338 IKEQIE  343 (379)
T ss_dssp             HHHHHH
T ss_pred             HHHhHh
Confidence            987653

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=4.2e-44  Score=321.86  Aligned_cols=306  Identities=28%  Similarity=0.483  Sum_probs=244.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-cC-----CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-LI-----EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~-----~~d~vi~~a  105 (346)
                      |+|||||||||||++|+++|+++ | ++|++++|+...    ........++.++.+|+.+.. ..     ++|+|||+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A   75 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDA----ISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLV   75 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESCCGG----GGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECB
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCCcch----HHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcc
Confidence            68999999999999999999998 8 999999996432    222233457899999999742 22     699999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCC-CC-CCCCCchHHhHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGKRVA  183 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK~~~  183 (346)
                      +...+.....++...+++|+.++.+++++|++.+.||||+||..+|+.....+++|+.+... .+ ..|.+.|+.+|..+
T Consensus        76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~  155 (345)
T 2bll_A           76 AIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL  155 (345)
T ss_dssp             CCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHH
T ss_pred             cccCccchhcCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHH
Confidence            87654444567888999999999999999998888999999999999776666777743210 11 13456899999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCC------CCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHH
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      |.+++.+++..+++++++||+.+|||+...      ....++..++..+..+..+.++++++..++++|++|+|++++.+
T Consensus       156 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~  235 (345)
T 2bll_A          156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI  235 (345)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHH
Confidence            999999988889999999999999998542      12346778888888898888888888889999999999999999


Q ss_pred             HhCCC----CCcEEecCCC-CCCHHHHHHHHHHHcCCCcceEEccCC---------------CCCCCcccCChHHHHhhc
Q 019060          258 MEGEN----TGPINIGNPG-EFTMLELAENVKELINPNVEITMVENT---------------PDDPRQRKPDITKATELL  317 (346)
Q Consensus       258 ~~~~~----~~~~~~~~~~-~~s~~ei~~~i~~~~g~~~~~~~~~~~---------------~~~~~~~~~~~~k~~~~l  317 (346)
                      ++++.    +++||+++++ .+|+.|+++.+.+.+|.+......+..               ........+|++|++++|
T Consensus       236 ~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l  315 (345)
T 2bll_A          236 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL  315 (345)
T ss_dssp             HHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHH
T ss_pred             HhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhcccHHHHHHhc
Confidence            98652    5689999986 899999999999999875432211111               012234667999999999


Q ss_pred             CCcccccHHhHHHHHHHHHHHhhcCC
Q 019060          318 GWEPKIKLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       318 g~~p~~~~~e~i~~~~~~~~~~~~~~  343 (346)
                      ||+|+++++++|+++++||+++.+..
T Consensus       316 G~~p~~~l~~~l~~~~~~~~~~~~~~  341 (345)
T 2bll_A          316 DWEPKIDMQETIDETLDFFLRTVDLT  341 (345)
T ss_dssp             CCCCCCCHHHHHHHHHHHHHHHSCTT
T ss_pred             CCCccccHHHHHHHHHHHHHHcCCCC
Confidence            99999999999999999998876543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-44  Score=323.19  Aligned_cols=308  Identities=28%  Similarity=0.405  Sum_probs=244.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcCCCCeeEEecccCCcccC-----C--CCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIGHPRFELIRHDVTEPLLI-----E--VDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~-----~--~d~vi~  103 (346)
                      ||+|||||||||||++|+++|++.| ++|++++|..... ......+....++.++.+|+.+....     +  +|+|||
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFH   79 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCC-CEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence            3799999999999999999999999 9999999853222 21222222234688999999987533     3  999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCC-----------cCCCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESY-----------WGNVNPI  170 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~-----------~~~~~~~  170 (346)
                      +|+.........++...+++|+.++.+++++|++.++  +|||+||.++|+.....++.|+.           ..+..+.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~  159 (347)
T 1orr_A           80 LAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL  159 (347)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred             CCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence            9987654334567888999999999999999998875  79999999999865544322211           1111455


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC-CccHHHHHHHHHHcCC-----CeEEecCCcceeec
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGE-----PLTVQAPGTQTRSF  244 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  244 (346)
                      .|.+.|+.+|.++|.+++.++.+.+++++++||+.+|||..... ...++..++.....+.     ++.++++++..+++
T Consensus       160 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  239 (347)
T 1orr_A          160 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV  239 (347)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEee
Confidence            67788999999999999999888899999999999999975432 1345666776666665     67777888899999


Q ss_pred             ccHHHHHHHHHHHHhCC---CCCcEEecCCC--CCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCC
Q 019060          245 CYVSDMVDGLIRLMEGE---NTGPINIGNPG--EFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGW  319 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~---~~~~~~~~~~~--~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  319 (346)
                      +|++|+|++++.+++..   .+++||+++++  ++|+.|+++.+.+.+|.+..+...+..+.......+|++|+++.|||
T Consensus       240 i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~  319 (347)
T 1orr_A          240 LHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDW  319 (347)
T ss_dssp             EEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCC
T ss_pred             EEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHHHHHHCC
Confidence            99999999999999852   25599999886  49999999999999998877776665544455677899999999999


Q ss_pred             cccccHHhHHHHHHHHHHHhh
Q 019060          320 EPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       320 ~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +|+++++|+|+++++|+++..
T Consensus       320 ~p~~~~~e~l~~~~~~~~~~~  340 (347)
T 1orr_A          320 SPKVSAKDGVQKMYDWTSSIL  340 (347)
T ss_dssp             CCCSCHHHHHHHHHHHHHHC-
T ss_pred             CccCCHHHHHHHHHHHHHHHH
Confidence            998899999999999998765

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=1.2e-43  Score=320.54  Aligned_cols=304  Identities=20%  Similarity=0.248  Sum_probs=243.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      .+|+|||||||||||++|+++|++.| ++|++++|+...............++.++.+|+.+....       ++|+|||
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCC-CeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 999999996543322221111134788999999987532       4899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCC-CCCCCCCcCCCCCCCCCCchHHhH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      +|+.........++...+++|+.++.+++++|++.+ + +|||+||..+||.... .+.+|+     ++..|.+.|+.+|
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~-----~~~~~~~~Y~~sK  161 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSK  161 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHH
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCC-----CCCCCCCccHHHH
Confidence            998654334456788899999999999999999876 5 8999999999986543 355665     4566778999999


Q ss_pred             HHHHHHHHHHHHHh---------CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          181 RVAETLMFDYHRQH---------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       181 ~~~E~~~~~~~~~~---------~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      .++|.+++.++.+.         +++++++||+.+|||+... ...++..++..+..+..+.+ .+++..++|+|++|+|
T Consensus       162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~-~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva  239 (357)
T 1rkx_A          162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPL  239 (357)
T ss_dssp             HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc-cccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHH
Confidence            99999999987754         8999999999999997532 24678888888888887765 4567889999999999


Q ss_pred             HHHHHHHhC------CCCCcEEecCC--CCCCHHHHHHHHHHHcCCCcceEEccC-CCCCCCcccCChHHHHhhcCCccc
Q 019060          252 DGLIRLMEG------ENTGPINIGNP--GEFTMLELAENVKELINPNVEITMVEN-TPDDPRQRKPDITKATELLGWEPK  322 (346)
Q Consensus       252 ~~i~~~~~~------~~~~~~~~~~~--~~~s~~ei~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~k~~~~lg~~p~  322 (346)
                      ++++.+++.      ..+++||++++  +++|+.|+++.+.+.+|.+..+...+. .+.......+|++|+++.|||+|+
T Consensus       240 ~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~  319 (357)
T 1rkx_A          240 SGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPR  319 (357)
T ss_dssp             HHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCC
T ss_pred             HHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHhCCCcC
Confidence            999998874      23789999974  689999999999999998776654432 223344567899999999999999


Q ss_pred             ccHHhHHHHHHHHHHHhhcC
Q 019060          323 IKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       323 ~~~~e~i~~~~~~~~~~~~~  342 (346)
                      ++++|+|+++++||+++...
T Consensus       320 ~~l~e~l~~~~~~~~~~~~~  339 (357)
T 1rkx_A          320 WNLNTTLEYIVGWHKNWLSG  339 (357)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHHHHHHHhcC
Confidence            99999999999999877543

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-43  Score=320.71  Aligned_cols=306  Identities=21%  Similarity=0.224  Sum_probs=243.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhc------CCCCeeEEecccCCcccC-------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI------GHPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~------~~~~~~~~~~d~~~~~~~-------~   97 (346)
                      +|+|||||||||||++|+++|+++| ++|++++|..... ...+..+.      ...++.++.+|+.+.+..       +
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCC-CEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999 9999999965321 11122211      124688999999987532       4


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      +|+|||+||.........++...+++|+.++.+++++|++.++    +|||+||..+|+.....+++|+     ++..|.
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~~~~  177 (375)
T 1t2a_A          103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPR  177 (375)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCC
T ss_pred             CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCcc-----CCCCCC
Confidence            7999999997654444567888999999999999999998874    8999999999997666677887     566677


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva  251 (346)
                      +.|+.+|.++|.+++.++.+.+++++++|++.+|||+..... ...+..++..+..+.. ...+++++..++|+|++|+|
T Consensus       178 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva  257 (375)
T 1t2a_A          178 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV  257 (375)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence            899999999999999998888999999999999999754221 1234555666666653 44557788899999999999


Q ss_pred             HHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceE-------------------Ecc--CCCCCCCcccCCh
Q 019060          252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEIT-------------------MVE--NTPDDPRQRKPDI  310 (346)
Q Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~-------------------~~~--~~~~~~~~~~~~~  310 (346)
                      ++++.+++++..++||+++++++|+.|+++.+.+.+|.+..+.                   ..+  ..+.......+|+
T Consensus       258 ~a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  337 (375)
T 1t2a_A          258 EAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC  337 (375)
T ss_dssp             HHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HHHHHHHhcCCCceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCH
Confidence            9999999887789999999999999999999999999875432                   111  1222334466799


Q ss_pred             HHHHhhcCCcccccHHhHHHHHHHHHHHhhcCC
Q 019060          311 TKATELLGWEPKIKLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       311 ~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~~  343 (346)
                      +|++++|||+|+++++|+++++++||++....+
T Consensus       338 ~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~  370 (375)
T 1t2a_A          338 TKAKQKLNWKPRVAFDELVREMVHADVELMRTN  370 (375)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCccCCHHHHHHHHHHHHHHhhccC
Confidence            999999999999999999999999998876543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-44  Score=315.52  Aligned_cols=271  Identities=21%  Similarity=0.230  Sum_probs=232.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |.|+|||||||||||++|+++|+++| ++|++++|.                    .+|+.+.+..       ++|+|||
T Consensus         4 M~m~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~~~d~vi~   62 (287)
T 3sc6_A            4 MKERVIITGANGQLGKQLQEELNPEE-YDIYPFDKK--------------------LLDITNISQVQQVVQEIRPHIIIH   62 (287)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHSCTTT-EEEEEECTT--------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ceeEEEEECCCCHHHHHHHHHHHhCC-CEEEEeccc--------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence            44699999999999999999999999 999999982                    2555554321       5999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      +|+.........++...+++|+.++.+++++|++.++||||+||..+|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  137 (287)
T 3sc6_A           63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGDRPEGYDEF-----HNPAPINIYGASKYAG  137 (287)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCCCCSSCBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhhcCCCCCCCCCCC-----CCCCCCCHHHHHHHHH
Confidence            99987765566789999999999999999999999999999999999998877888888     6778889999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT  263 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~  263 (346)
                      |.+++.+.    .+++++||+.+|||+.    ..++..++.....+..+.+.+  +..++++|++|+|++++.+++++..
T Consensus       138 E~~~~~~~----~~~~ilR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~  207 (287)
T 3sc6_A          138 EQFVKELH----NKYFIVRTSWLYGKYG----NNFVKTMIRLGKEREEISVVA--DQIGSPTYVADLNVMINKLIHTSLY  207 (287)
T ss_dssp             HHHHHHHC----SSEEEEEECSEECSSS----CCHHHHHHHHHTTCSEEEEEC--SCEECCEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhC----CCcEEEeeeeecCCCC----CcHHHHHHHHHHcCCCeEeec--CcccCceEHHHHHHHHHHHHhCCCC
Confidence            99997763    4789999999999863    457788888877788887765  3788999999999999999998888


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc-----CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHH
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVE-----NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~  338 (346)
                      |+||+++++.+|+.|+++.+.+.+|.+..+...+     .....+....+|++|++ .|||.|.++++++++++++|+++
T Consensus       208 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~~~~~l~~~~~~~~~  286 (287)
T 3sc6_A          208 GTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQMPSWEEGLERFFIETKS  286 (287)
T ss_dssp             EEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HTTCCCCCBHHHHHHHHHHHTC-
T ss_pred             CeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hhCCCCCccHHHHHHHHHHHHhc
Confidence            8999999999999999999999999887776543     23334456778999999 89999999999999999999754

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=4.4e-44  Score=318.62  Aligned_cols=291  Identities=23%  Similarity=0.326  Sum_probs=237.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----C--CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I--EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~--~~d~vi~  103 (346)
                      ++|+|||||||||||++|+++|++.| ++|++++|..                   .+|+.+.+.     .  ++|+|||
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~~~d~vih   61 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYL   61 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCT-TEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CeEEEEecCc-------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence            35799999999999999999999999 9999887742                   245555432     2  7999999


Q ss_pred             cccCCCc-cccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhH
Q 019060          104 LACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK  180 (346)
                      +|+.... .....++...+++|+.++.+++++|++.++ +|||+||..+|+.....+++|+.+.. .+..|. +.|+.+|
T Consensus        62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK  140 (321)
T 1e6u_A           62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQ-GTLEPTNEPYAIAK  140 (321)
T ss_dssp             CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTS-SCCCGGGHHHHHHH
T ss_pred             cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCcccccc-CCCCCCCCccHHHH
Confidence            9987542 224567788999999999999999999987 99999999999977677778874321 134453 5899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHc----C-CCeEEecCCcceeecccHHHHHHH
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIR----G-EPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      ..+|.+++.++++.+++++++||+.+|||+....  ...++..++..+..    | .++.++++++..++|+|++|+|++
T Consensus       141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~  220 (321)
T 1e6u_A          141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA  220 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence            9999999999888899999999999999976432  13567777776654    3 567777888899999999999999


Q ss_pred             HHHHHhCCC----------CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccc
Q 019060          254 LIRLMEGEN----------TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKI  323 (346)
Q Consensus       254 i~~~~~~~~----------~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~  323 (346)
                      ++.+++++.          +++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+++ |||+|++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~  299 (321)
T 1e6u_A          221 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ-LGWYHEI  299 (321)
T ss_dssp             HHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHHH-TTCCCCC
T ss_pred             HHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCCCCcccccCCHHHHHh-cCCccCC
Confidence            999998764          37999999999999999999999999887776666555455567889999999 9999998


Q ss_pred             cHHhHHHHHHHHHHHhhcCC
Q 019060          324 KLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       324 ~~~e~i~~~~~~~~~~~~~~  343 (346)
                      +++|+++++++||+++...+
T Consensus       300 ~~~~~l~~~~~~~~~~~~~~  319 (321)
T 1e6u_A          300 SLEAGLASTYQWFLENQDRF  319 (321)
T ss_dssp             CHHHHHHHHHHHHHHTC---
T ss_pred             cHHHHHHHHHHHHHHHHHhh
Confidence            99999999999998876544

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=3.9e-43  Score=314.76  Aligned_cols=303  Identities=24%  Similarity=0.356  Sum_probs=239.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+|||||||||||++++++|+++| ++|++++|.............  ...++.++.+|+.+.+..       ++|+|||
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih   79 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence            689999999999999999999999 999999875432222221111  123578899999986432       5999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK~  181 (346)
                      +||.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+.+|+     .+..| ...|+.+|.
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~-----~~~~~~~~~Y~~sK~  154 (338)
T 1udb_A           80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVES-----FPTGTPQSPYGKSKL  154 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTT-----SCCCCCSSHHHHHHH
T ss_pred             CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcc-----cCCCCCCChHHHHHH
Confidence            9987654334456778899999999999999998887 8999999999987666667776     34433 678999999


Q ss_pred             HHHHHHHHHHHHh-CCceEEEEeccccCCCCC------CC--CccHHHHHHHHHH-cCCCeEEec------CCcceeecc
Q 019060          182 VAETLMFDYHRQH-GIEIRIARIFNTYGPRMN------ID--DGRVVSNFIAQAI-RGEPLTVQA------PGTQTRSFC  245 (346)
Q Consensus       182 ~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~------~~--~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~v  245 (346)
                      ++|.+++.++... +++++++||+++|||+..      ..  ...++..++.... .+..+.+++      +++..++|+
T Consensus       155 ~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i  234 (338)
T 1udb_A          155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYI  234 (338)
T ss_dssp             HHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEE
T ss_pred             HHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeE
Confidence            9999999988776 799999999999998531      11  1345666555444 345555554      456788999


Q ss_pred             cHHHHHHHHHHHHhCC--C--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcc
Q 019060          246 YVSDMVDGLIRLMEGE--N--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP  321 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~--~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  321 (346)
                      |++|+|++++.+++..  .  .++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|++++|||+|
T Consensus       235 ~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p  314 (338)
T 1udb_A          235 HVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRV  314 (338)
T ss_dssp             EHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred             EHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHcCCCc
Confidence            9999999999988752  2  25899999999999999999999999887776666555555567789999999999999


Q ss_pred             cccHHhHHHHHHHHHHHhhc
Q 019060          322 KIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       322 ~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +++++|+++++++||+++..
T Consensus       315 ~~~l~~~l~~~~~w~~~~~~  334 (338)
T 1udb_A          315 TRTLDEMAQDTWHWQSRHPQ  334 (338)
T ss_dssp             CCCHHHHHHHHHHHHHHCTT
T ss_pred             CCCHHHHHHHHHHHHHhccc
Confidence            99999999999999987643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=2e-43  Score=319.52  Aligned_cols=299  Identities=28%  Similarity=0.442  Sum_probs=243.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+||||||+||||++|+++|++. | ++|++++|... .....+.......++.++.+|+.+....       ++|+|||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQ-DTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCS-CEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCC-CeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence            68999999999999999999998 7 99999998642 2222332222235789999999986432       7999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHc--CC--------eEEEEecccccCCCCC--C--------CCCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV--GA--------RILLTSTSEVYGDPLV--H--------PQDESY  163 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--------r~i~~SS~~v~~~~~~--~--------~~~e~~  163 (346)
                      +|+.........++...+++|+.++.+++++|.+.  ++        +|||+||.++||....  .        +++|+ 
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~-  158 (361)
T 1kew_A           80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET-  158 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT-
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC-
Confidence            99976543445678889999999999999999887  63        8999999999986432  1        55665 


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                          ++..+.+.|+.+|.++|.+++.++.+.+++++++||+.+|||....  ..++..++..+..+..+.+++++...++
T Consensus       159 ----~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (361)
T 1kew_A          159 ----TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             ----SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             ----CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCc--ccHHHHHHHHHHcCCCceEcCCCceeEe
Confidence                4667778999999999999999988889999999999999997532  3467778888888888888888888899


Q ss_pred             cccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcc--------eEEccCCCCCCCcccCChHHHH
Q 019060          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVE--------ITMVENTPDDPRQRKPDITKAT  314 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~--------~~~~~~~~~~~~~~~~~~~k~~  314 (346)
                      ++|++|+|++++.+++.+. +++||+++++++|+.|+++.+.+.+|.+.+        +...+..+.......+|++|++
T Consensus       233 ~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~  312 (361)
T 1kew_A          233 WLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKIS  312 (361)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHH
T ss_pred             eEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHH
Confidence            9999999999999998765 569999999999999999999999986432        2233333333345678999999


Q ss_pred             hhcCCcccccHHhHHHHHHHHHHHh
Q 019060          315 ELLGWEPKIKLRDGLPLMEDDFRLR  339 (346)
Q Consensus       315 ~~lg~~p~~~~~e~i~~~~~~~~~~  339 (346)
                      ++|||+|+++++++|+++++||+++
T Consensus       313 ~~lG~~p~~~~~e~l~~~~~~~~~~  337 (361)
T 1kew_A          313 RELGWKPLETFESGIRKTVEWYLAN  337 (361)
T ss_dssp             HHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred             HHhCCCCccCHHHHHHHHHHHHHhc
Confidence            9999999999999999999999765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=8.8e-44  Score=325.88  Aligned_cols=303  Identities=24%  Similarity=0.369  Sum_probs=243.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHH-hcCCCeEEEEeCCCCCC--------cchhhh----hcC---CCC---eeEEecccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGS--------KDNLRK----WIG---HPR---FELIRHDVTE   92 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~--------~~~~~~----~~~---~~~---~~~~~~d~~~   92 (346)
                      +|+|||||||||||++|+++|+ +.| ++|++++|.....        ...+..    ...   ..+   +.++.+|+.+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCC-CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCC-CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            5799999999999999999999 999 9999999865332        122211    111   124   8899999998


Q ss_pred             cccC-------C-CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-------C
Q 019060           93 PLLI-------E-VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-------V  156 (346)
Q Consensus        93 ~~~~-------~-~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~-------~  156 (346)
                      ...+       + +|+|||+|+.........++...+++|+.++.+++++|++.++ +|||+||.++|+...       .
T Consensus        81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  160 (397)
T 1gy8_A           81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA  160 (397)
T ss_dssp             HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence            6432       4 9999999997654444567888999999999999999999887 899999999998665       4


Q ss_pred             CCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCC-------CCccHHHHHH----HH
Q 019060          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI-------DDGRVVSNFI----AQ  225 (346)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~-------~~~~~~~~~~----~~  225 (346)
                      .+++|+     ++..|.+.|+.+|.++|.+++.++.+.+++++++||+++|||+...       ....++..++    ..
T Consensus       161 ~~~~E~-----~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~  235 (397)
T 1gy8_A          161 EPIDIN-----AKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSD  235 (397)
T ss_dssp             CCBCTT-----SCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHH
T ss_pred             cCcCcc-----CCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHH
Confidence            667777     5667778999999999999999988889999999999999997421       1234555555    24


Q ss_pred             HHcCC------------CeEEec------CCcceeecccHHHHHHHHHHHHhCCC--C--------CcEEecCCCCCCHH
Q 019060          226 AIRGE------------PLTVQA------PGTQTRSFCYVSDMVDGLIRLMEGEN--T--------GPINIGNPGEFTML  277 (346)
Q Consensus       226 ~~~~~------------~~~~~~------~~~~~~~~v~v~Dva~~i~~~~~~~~--~--------~~~~~~~~~~~s~~  277 (346)
                      +..+.            .+.+++      +++..++|+|++|+|++++.+++.+.  .        ++||+++++++|+.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~  315 (397)
T 1gy8_A          236 IAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVR  315 (397)
T ss_dssp             HSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHH
T ss_pred             HHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHH
Confidence            44443            466665      56788999999999999999887532  2        78999999999999


Q ss_pred             HHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccc-cHHhHHHHHHHHHHHhh
Q 019060          278 ELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKI-KLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       278 ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~~~~~~~~~  340 (346)
                      |+++.+.+.+|.+.++...+..........+|++|+++.|||+|++ +++++|+++++||+++.
T Consensus       316 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~  379 (397)
T 1gy8_A          316 EVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHP  379 (397)
T ss_dssp             HHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhcc
Confidence            9999999999988777766655555566788999999999999999 99999999999997763

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=1.5e-42  Score=311.71  Aligned_cols=306  Identities=23%  Similarity=0.263  Sum_probs=244.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc-chhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      +|+|||||||||||++|+++|+++| ++|++++|+..... ..+.......++.++.+|+.+.+..       ++|+|||
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKG-YEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence            5899999999999999999999999 99999999754322 1222222234688999999986432       4799999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      +||.........++...+++|+.++.+++++|.+.++  +|||+||.++||.....+++|+     .+..|.+.|+.+|.
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~-----~~~~~~~~Y~~sK~  156 (345)
T 2z1m_A           82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEK-----TPFYPRSPYAVAKL  156 (345)
T ss_dssp             CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHH
T ss_pred             CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCcc-----CCCCCCChhHHHHH
Confidence            9997654445677889999999999999999998873  8999999999998776677777     56667789999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      ++|.+++.++.+.+++++++|+.++|||+..... ...+..++..+..+.. ....++++..++++|++|+|++++.+++
T Consensus       157 ~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~  236 (345)
T 2z1m_A          157 FGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQ  236 (345)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHh
Confidence            9999999998888999999999999999854321 1223445555556653 3345677788899999999999999998


Q ss_pred             CCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceE-------------------Ecc--CCCCCCCcccCChHHHHhhcC
Q 019060          260 GENTGPINIGNPGEFTMLELAENVKELINPNVEIT-------------------MVE--NTPDDPRQRKPDITKATELLG  318 (346)
Q Consensus       260 ~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~-------------------~~~--~~~~~~~~~~~~~~k~~~~lg  318 (346)
                      ++..++||+++++.+|+.|+++.+.+.+|.+..+.                   ..+  ..+.......+|++|++++||
T Consensus       237 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG  316 (345)
T 2z1m_A          237 QPEPDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLG  316 (345)
T ss_dssp             SSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred             CCCCceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcC
Confidence            77778999999999999999999999999875432                   111  122233345679999999999


Q ss_pred             CcccccHHhHHHHHHHHHHHhhcCC
Q 019060          319 WEPKIKLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       319 ~~p~~~~~e~i~~~~~~~~~~~~~~  343 (346)
                      |+|+++++|+++++++||+++.+..
T Consensus       317 ~~p~~~~~~~l~~~~~~~~~~~~~~  341 (345)
T 2z1m_A          317 WKPRTTFDELVEIMMEADLKRVRDR  341 (345)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHC-
T ss_pred             CcccCCHHHHHHHHHHHHHHHhccc
Confidence            9998899999999999998876543

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=1e-42  Score=316.14  Aligned_cols=305  Identities=23%  Similarity=0.273  Sum_probs=240.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcC-----CCCeeEEecccCCcccC-------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG-----HPRFELIRHDVTEPLLI-------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~-----~~~~~~~~~d~~~~~~~-------~~   98 (346)
                      +|+|||||||||||++++++|+++| ++|++++|+.... ...+.....     ..++.++.+|+.+.+..       ++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   79 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP   79 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999 9999999864321 111221111     24688899999986432       47


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      |+|||+|+.........++...+++|+.++.+++++|++.++    +||++||..+|+.....+.+|+     ++..|.+
T Consensus        80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~-----~~~~~~~  154 (372)
T 1db3_A           80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRS  154 (372)
T ss_dssp             SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCS
T ss_pred             CEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCcc-----CCCCCCC
Confidence            999999997655445567888899999999999999998874    8999999999997666677777     5666778


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      .|+.+|.++|.+++.++.+.+++++++|++.+|||+..... ...+..++..+..+.. ....++++..++|+|++|+|+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~  234 (372)
T 1db3_A          155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVK  234 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHH
Confidence            99999999999999998888999999999999999754321 2345556666666753 445677888999999999999


Q ss_pred             HHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEE-----------------------------cc--CCCC
Q 019060          253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITM-----------------------------VE--NTPD  301 (346)
Q Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~-----------------------------~~--~~~~  301 (346)
                      +++.+++++..++||+++++++|+.|+++.+.+.+|.+.++..                             .+  ..+.
T Consensus       235 a~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (372)
T 1db3_A          235 MQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA  314 (372)
T ss_dssp             HHHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCC
T ss_pred             HHHHHHhcCCCceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCC
Confidence            9999998777789999999999999999999999987543221                             01  1122


Q ss_pred             CCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcC
Q 019060          302 DPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       302 ~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~  342 (346)
                      ......+|++|++++|||+|+++++|+++++++||+++.+.
T Consensus       315 ~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~  355 (372)
T 1db3_A          315 EVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKK  355 (372)
T ss_dssp             C-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHT
T ss_pred             chhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhc
Confidence            23345679999999999999989999999999999887654

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=1.2e-42  Score=316.53  Aligned_cols=303  Identities=20%  Similarity=0.251  Sum_probs=240.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc-chhhhhcC-----CC-CeeEEecccCCcccC-------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIG-----HP-RFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~-----~~-~~~~~~~d~~~~~~~-------~   97 (346)
                      +|+|||||||||||++|+++|++.| ++|++++|...... ..+.....     .. ++.++.+|+.+....       +
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCC-CEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            4799999999999999999999999 99999999653311 11111111     12 688999999986432       4


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC------eEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA------RILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~------r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +|+|||+|+.........++...+++|+.++.+++++|.+.++      +|||+||..+||.... +.+|+     ++..
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~-----~~~~  180 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSET-----TPFH  180 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTT-----SCCC
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCC-----CCCC
Confidence            7999999997664444567888999999999999999987652      9999999999997665 77777     5667


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~D  249 (346)
                      |.+.|+.+|.++|.+++.++...+++++++|++++|||+..... ...+..++..+..+.. ....++++..++|+|++|
T Consensus       181 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~D  260 (381)
T 1n7h_A          181 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD  260 (381)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHH
Confidence            77899999999999999998888999999999999999754221 1234455555666653 344577788899999999


Q ss_pred             HHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcc--eEEcc--CCCCCCCcccCChHHHHhhcCCcccccH
Q 019060          250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVE--ITMVE--NTPDDPRQRKPDITKATELLGWEPKIKL  325 (346)
Q Consensus       250 va~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~--~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~  325 (346)
                      +|++++.+++.+..++||+++++.+|+.|+++.+.+.+|.+..  +...+  ..+.......+|++|++++|||+|++++
T Consensus       261 va~a~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l  340 (381)
T 1n7h_A          261 YVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF  340 (381)
T ss_dssp             HHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred             HHHHHHHHHhCCCCCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCCcccCCH
Confidence            9999999998877899999999999999999999999997642  22222  1233334566799999999999998899


Q ss_pred             HhHHHHHHHHHHHhhc
Q 019060          326 RDGLPLMEDDFRLRLA  341 (346)
Q Consensus       326 ~e~i~~~~~~~~~~~~  341 (346)
                      +++|+++++||.++.+
T Consensus       341 ~e~l~~~~~~~~~~~~  356 (381)
T 1n7h_A          341 EKLVKMMVDEDLELAK  356 (381)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcc
Confidence            9999999999988753

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=4.8e-43  Score=310.64  Aligned_cols=291  Identities=21%  Similarity=0.251  Sum_probs=230.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~v  101 (346)
                      |+|+|||||||||||++|+++|+++  | ++|++++|+....  ...     .++.++.+|+.+.+..       ++|+|
T Consensus         1 M~~~vlVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~--~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~v   72 (312)
T 2yy7_A            1 MNPKILIIGACGQIGTELTQKLRKLYGT-ENVIASDIRKLNT--DVV-----NSGPFEVVNALDFNQIEHLVEVHKITDI   72 (312)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHHHCG-GGEEEEESCCCSC--HHH-----HSSCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCceEEEECCccHHHHHHHHHHHHhCCC-CEEEEEcCCCccc--ccc-----CCCceEEecCCCHHHHHHHHhhcCCCEE
Confidence            4689999999999999999999999  8 9999999865332  111     2577899999986421       79999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC-CCCCCCCcCCCCCCCCCCchHHh
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV-HPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~-~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      ||+|+.... ....++...+++|+.++.+++++|++.++ ||||+||..+|+.... .+.+|+     .+..|.+.|+.+
T Consensus        73 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~~~~~Y~~s  146 (312)
T 2yy7_A           73 YLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQY-----TIMEPSTVYGIS  146 (312)
T ss_dssp             EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSS-----CBCCCCSHHHHH
T ss_pred             EECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCcccc-----CcCCCCchhHHH
Confidence            999986543 23467888999999999999999999887 9999999999986432 445565     466777899999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCc--cHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      |.++|.+++.++++.+++++++||+.+|||...+...  ..+...+.....++.+..+++++..++|+|++|+|++++.+
T Consensus       147 K~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~  226 (312)
T 2yy7_A          147 KQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINI  226 (312)
T ss_dssp             HHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHH
Confidence            9999999999988889999999999999986543221  23333334444555566667788889999999999999999


Q ss_pred             HhCCC-----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCC---CCCcccCChHHHHhhcCCcccccHHhHH
Q 019060          258 MEGEN-----TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD---DPRQRKPDITKATELLGWEPKIKLRDGL  329 (346)
Q Consensus       258 ~~~~~-----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~~k~~~~lg~~p~~~~~e~i  329 (346)
                      ++++.     +++||+++ +.+|+.|+++.+.+.+|. ..+.+.+....   ......+|++|+++.|||+|+++++|+|
T Consensus       227 ~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l  304 (312)
T 2yy7_A          227 MKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQAREDWDWKHTFDLESMT  304 (312)
T ss_dssp             HHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHHHCCCCCCCHHHHH
T ss_pred             HhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHHcCCCCCCCHHHHH
Confidence            98764     27999986 899999999999999983 34444332100   1122467999999999999999999999


Q ss_pred             HHHHHHHH
Q 019060          330 PLMEDDFR  337 (346)
Q Consensus       330 ~~~~~~~~  337 (346)
                      +++++||+
T Consensus       305 ~~~~~~~k  312 (312)
T 2yy7_A          305 KDMIEHLS  312 (312)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            99999973

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=3.8e-42  Score=315.70  Aligned_cols=307  Identities=25%  Similarity=0.281  Sum_probs=240.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc----------------chhhhh--cCCCCeeEEecccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK----------------DNLRKW--IGHPRFELIRHDVTE   92 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~----------------~~~~~~--~~~~~~~~~~~d~~~   92 (346)
                      .+|+|||||||||||++|+++|+++| ++|++++|......                +.+...  ....++.++.+|+.+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d   88 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD   88 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCC-CeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence            46899999999999999999999999 99999987431110                011110  113478899999998


Q ss_pred             cccC-------CCCEEEEcccCCCccccccChH---HHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCC
Q 019060           93 PLLI-------EVDQIYHLACPASPIFYKYNPV---KTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        93 ~~~~-------~~d~vi~~a~~~~~~~~~~~~~---~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~  160 (346)
                      .+..       ++|+|||+||.........++.   ..+++|+.++.+++++|++.++  +|||+||.++|+... .+.+
T Consensus        89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~  167 (404)
T 1i24_A           89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE  167 (404)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred             HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCC
Confidence            7532       3999999999765433334443   4779999999999999998874  899999999998654 4566


Q ss_pred             CCCcCCC---------CCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC-------------C--c
Q 019060          161 ESYWGNV---------NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-------------D--G  216 (346)
Q Consensus       161 e~~~~~~---------~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-------------~--~  216 (346)
                      |+.+...         .+..|.+.|+.+|.++|.+++.++...+++++++||+.||||+....             .  .
T Consensus       168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~  247 (404)
T 1i24_A          168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG  247 (404)
T ss_dssp             SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred             ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence            6533211         24566788999999999999998888899999999999999975321             0  3


Q ss_pred             cHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C--CcEEecCCCCCCHHHHHHHHHHH---cCC
Q 019060          217 RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T--GPINIGNPGEFTMLELAENVKEL---INP  289 (346)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~--~~~~~~~~~~~s~~ei~~~i~~~---~g~  289 (346)
                      .++..++..+..++.+.++++++..++|+|++|+|++++.+++.+.  +  ++||+++ +++|+.|+++.+.+.   +|.
T Consensus       248 ~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~  326 (404)
T 1i24_A          248 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGL  326 (404)
T ss_dssp             CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTC
T ss_pred             hHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCC
Confidence            5778888888889988888888889999999999999999998765  3  4899998 899999999999998   787


Q ss_pred             CcceEEccCCCC--CCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          290 NVEITMVENTPD--DPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       290 ~~~~~~~~~~~~--~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +.++...+....  ......+|++|++ +|||+|+++++++++++++|+.....
T Consensus       327 ~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~  379 (404)
T 1i24_A          327 DVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKD  379 (404)
T ss_dssp             CCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGG
T ss_pred             CccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhh
Confidence            776655554322  2234567999997 69999999999999999999876543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=1.1e-41  Score=307.70  Aligned_cols=293  Identities=20%  Similarity=0.281  Sum_probs=234.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----C-----CCCEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I-----EVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-----~~d~v  101 (346)
                      +|+|||||||||||++|+++|+++|.++|++++|......  ....   .++. +.+|+.+.+.     .     ++|+|
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V  119 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI  119 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---cCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence            5899999999999999999999998678999998643211  1111   1223 5667665421     1     59999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      ||+|+....  ...++...+++|+.++.+++++|++.+++|||+||..+|+.....+++|+     ++..|.+.|+.+|.
T Consensus       120 ih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~  192 (357)
T 2x6t_A          120 FHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVFGYSKF  192 (357)
T ss_dssp             EECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSG-----GGCCCSSHHHHHHH
T ss_pred             EECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCc-----CCCCCCChhHHHHH
Confidence            999987653  45678889999999999999999988789999999999997666677887     46677789999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcc-eeecccHHHHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQ-TRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~~i~~~~  258 (346)
                      ++|.+++.++.+.+++++++||+.+|||+....  ...++..++..+..++.+.++++++. .++++|++|+|++++.++
T Consensus       193 ~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~  272 (357)
T 2x6t_A          193 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFL  272 (357)
T ss_dssp             HHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHH
Confidence            999999998877789999999999999975422  13577788888888888887788778 899999999999999999


Q ss_pred             hCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCCCcccCChHHHHhhcCC-cccccHHhHHHHHH
Q 019060          259 EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDPRQRKPDITKATELLGW-EPKIKLRDGLPLME  333 (346)
Q Consensus       259 ~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~~k~~~~lg~-~p~~~~~e~i~~~~  333 (346)
                      +++.+++||+++++++|+.|+++.+.+.+|.+ .+...+...    ........|++|+++ ||| .|.++++|+|++++
T Consensus       273 ~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lG~~~~~~~l~e~l~~~~  350 (357)
T 2x6t_A          273 ENGVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYM  350 (357)
T ss_dssp             HHCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHHHHH-TTCCCCCCCHHHHHHHHH
T ss_pred             hcCCCCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHHHHH-cCCCCCCCCHHHHHHHHH
Confidence            87667899999999999999999999999987 333332211    112345678999976 999 78889999999999


Q ss_pred             HHHHHh
Q 019060          334 DDFRLR  339 (346)
Q Consensus       334 ~~~~~~  339 (346)
                      +||+++
T Consensus       351 ~~~~~~  356 (357)
T 2x6t_A          351 AWLNRD  356 (357)
T ss_dssp             HHHC--
T ss_pred             HHHhhc
Confidence            999653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=2.3e-42  Score=304.52  Aligned_cols=273  Identities=18%  Similarity=0.128  Sum_probs=226.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+|||||||||||++|+++|+ +| ++|++++|+.                .++.+|+.+.+..       ++|+|||+|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~----------------~~~~~D~~d~~~~~~~~~~~~~d~vih~a   62 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PV-GNLIALDVHS----------------KEFCGDFSNPKGVAETVRKLRPDVIVNAA   62 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TT-SEEEEECTTC----------------SSSCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cC-CeEEEecccc----------------ccccccCCCHHHHHHHHHhcCCCEEEECc
Confidence            689999999999999999999 89 9999999853                1346777776432       499999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      +.........++...+++|+.++.+++++|++.++||||+||..+|+.....+.+|+     ++..|.+.|+.+|.++|.
T Consensus        63 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~  137 (299)
T 1n2s_A           63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEK  137 (299)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             ccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCC-----CCCCCccHHHHHHHHHHH
Confidence            876644456788899999999999999999998889999999999998776778887     567778899999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC----
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE----  261 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~----  261 (346)
                      +++.++    .+++++||+.+|||+.    ..++..++..+..+..+...+  +..++++|++|+|++++.+++++    
T Consensus       138 ~~~~~~----~~~~ilRp~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~  207 (299)
T 1n2s_A          138 ALQDNC----PKHLIFRTSWVYAGKG----NNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKP  207 (299)
T ss_dssp             HHHHHC----SSEEEEEECSEECSSS----CCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             HHHHhC----CCeEEEeeeeecCCCc----CcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhcccc
Confidence            997763    4899999999999974    246777888778888777654  47789999999999999999765    


Q ss_pred             -CCCcEEecCCCCCCHHHHHHHHHHHcCCC------cceEEccC-----CCCCCCcccCChHHHHhhcCCcccccHHhHH
Q 019060          262 -NTGPINIGNPGEFTMLELAENVKELINPN------VEITMVEN-----TPDDPRQRKPDITKATELLGWEPKIKLRDGL  329 (346)
Q Consensus       262 -~~~~~~~~~~~~~s~~ei~~~i~~~~g~~------~~~~~~~~-----~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i  329 (346)
                       .+++||+++++++|+.|+++.+.+.+|.+      ..+...+.     .........+|++|++++|||+|+ +++|++
T Consensus       208 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l  286 (299)
T 1n2s_A          208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV  286 (299)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred             ccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCCC-CHHHHH
Confidence             26799999999999999999999999865      23333321     112234567899999999999998 999999


Q ss_pred             HHHHHHHHHh
Q 019060          330 PLMEDDFRLR  339 (346)
Q Consensus       330 ~~~~~~~~~~  339 (346)
                      +++++||+++
T Consensus       287 ~~~~~~~~~~  296 (299)
T 1n2s_A          287 KRMLTEMFTT  296 (299)
T ss_dssp             HHHHHHHHSC
T ss_pred             HHHHHHHHhc
Confidence            9999999764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.8e-41  Score=304.36  Aligned_cols=286  Identities=15%  Similarity=0.094  Sum_probs=223.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      ++|+|||||||||||++|+++|+++| ++|++++|+..... .+    ...++.++.+|+.+.+.     .++|+|||+|
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-~l----~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a   85 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQIQ-RL----AYLEPECRVAEMLDHAGLERALRGLDGVIFSA   85 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECTTSCGG-GG----GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecChHhhh-hh----ccCCeEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            35799999999999999999999999 99999999653221 11    12368899999998643     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC--CCCCCCCcCCCCCCCC----CCchHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV--HPQDESYWGNVNPIGV----RSCYDE  178 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~--~~~~e~~~~~~~~~~~----~~~Y~~  178 (346)
                      +...  ....++...+++|+.++.+++++|++.++ ||||+||..+|+....  .+ +|+     ++..|    .+.|+.
T Consensus        86 ~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~-----~~~~p~~~~~~~Y~~  157 (342)
T 2x4g_A           86 GYYP--SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEG-----LFYDSLPSGKSSYVL  157 (342)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTT-----CCCSSCCTTSCHHHH
T ss_pred             ccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCC-----CCCCccccccChHHH
Confidence            8654  23456777889999999999999999887 9999999999986544  34 666     45566    788999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      +|.++|.+++.+++. +++++++||+.+|||...  ... +..++..+..+..+.+   ++..++++|++|+|++++.++
T Consensus       158 sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~--~~~-~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~  230 (342)
T 2x4g_A          158 CKWALDEQAREQARN-GLPVVIGIPGMVLGELDI--GPT-TGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMAL  230 (342)
T ss_dssp             HHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCS--SCS-TTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCc--ccc-HHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHH
Confidence            999999999998876 999999999999999752  112 4556666677776654   457789999999999999999


Q ss_pred             hCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC----------------C-------C----CCCcccCCh
Q 019060          259 EGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENT----------------P-------D----DPRQRKPDI  310 (346)
Q Consensus       259 ~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~----------------~-------~----~~~~~~~~~  310 (346)
                      +++. +++||+++++ +|+.|+++.+.+.+|.+..+ ..+..                .       .    ......+|+
T Consensus       231 ~~~~~g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  308 (342)
T 2x4g_A          231 ERGRIGERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDG  308 (342)
T ss_dssp             HHSCTTCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------------CCTTCCCCBCC
T ss_pred             hCCCCCceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccCh
Confidence            8765 6799999999 99999999999999987665 33321                0       0    023466799


Q ss_pred             HHHHhhcCC-cccccHHhHHHHHHHHHHHhh
Q 019060          311 TKATELLGW-EPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       311 ~k~~~~lg~-~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +|+++.||| +| ++++++++++++||+++.
T Consensus       309 ~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g  338 (342)
T 2x4g_A          309 RKAREELGFFST-TALDDTLLRAIDWFRDNG  338 (342)
T ss_dssp             HHHHHHHCCCCC-SCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhCCCCCC-CCHHHHHHHHHHHHHHcC
Confidence            999999999 99 799999999999998763

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-41  Score=297.88  Aligned_cols=269  Identities=21%  Similarity=0.242  Sum_probs=224.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      ..|+|||||||||||++|+++|+++| ++|++++|.                    .+|+.+.+..       ++|+|||
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih   69 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVIN   69 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 999999984                    2455554321       6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      +|+.........++...+++|+.++.+++++|++.++||||+||.++|+.....+++|+     ++..|.+.|+.+|.++
T Consensus        70 ~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~  144 (292)
T 1vl0_A           70 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEG  144 (292)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             CCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHeECCCCCCCCCCC-----CCCCCccHHHHHHHHH
Confidence            99876544445778899999999999999999998889999999999997766677887     5667778999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT  263 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~  263 (346)
                      |.+++.+    ..+++++||+.+|||.     ..++..++.....+..+...+  +..++++|++|+|++++.+++++.+
T Consensus       145 E~~~~~~----~~~~~~lR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~  213 (292)
T 1vl0_A          145 ENFVKAL----NPKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY  213 (292)
T ss_dssp             HHHHHHH----CSSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHhh----CCCeEEEeeeeeeCCC-----cChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcCCC
Confidence            9999775    3479999999999982     346677777777777776654  4678999999999999999987667


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC-----CCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVENT-----PDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      ++||+++++++|+.|+++.+.+.+|.+..+...+..     ...+....+|++|+++.|||+|+ +++++++++++||+
T Consensus       214 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~~~~~~~~  291 (292)
T 1vl0_A          214 GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  291 (292)
T ss_dssp             EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             cEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHHHHHHHhc
Confidence            899999999999999999999999988766544422     12334567899999999999999 99999999999985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=1.1e-41  Score=304.29  Aligned_cols=283  Identities=25%  Similarity=0.404  Sum_probs=226.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      .+|+|||||||||||++|+++|+++| ++|++++|...........   ..++.++.+|+.+.+..       ++|+|||
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~---l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih   94 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNFATGKREVLPP---VAGLSVIEGSVTDAGLLERAFDSFKPTHVVH   94 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECCSSSCGGGSCS---CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCccchhhhhc---cCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence            46899999999999999999999999 9999999964332211111   14788999999986432       7999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCC--CCCCCCcCCCCCCCCCCchHHhH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVH--PQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~--~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      +||..... ...++.  +++|+.++.+++++|.+.++ +||++||..+|+.....  +++|+     +  .+...|+.+|
T Consensus        95 ~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~-----~--~~~~~Y~~sK  164 (330)
T 2pzm_A           95 SAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSP-----T--APFTSYGISK  164 (330)
T ss_dssp             CCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCC-----C--CCCSHHHHHH
T ss_pred             CCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCC-----C--CCCChHHHHH
Confidence            99876532 223333  89999999999999998887 99999999999865443  66666     2  4567899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH-HHHHHHh
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD-GLIRLME  259 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~-~i~~~~~  259 (346)
                      .++|.+++.+    +++++++||+++|||+.   ...++..++..+..+.  ..++++. .++++|++|+|+ +++.+++
T Consensus       165 ~~~e~~~~~~----~~~~~~iR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~  234 (330)
T 2pzm_A          165 TAGEAFLMMS----DVPVVSLRLANVTGPRL---AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQE  234 (330)
T ss_dssp             HHHHHHHHTC----SSCEEEEEECEEECTTC---CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHc----CCCEEEEeeeeeECcCC---CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhh
Confidence            9999998765    78999999999999984   2456677777766665  3334555 789999999999 9999998


Q ss_pred             CCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHH-----HhhcCCcccccHHhHHHHHHH
Q 019060          260 GENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA-----TELLGWEPKIKLRDGLPLMED  334 (346)
Q Consensus       260 ~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~-----~~~lg~~p~~~~~e~i~~~~~  334 (346)
                      .+.+++||+++++++|+.|+++.+.+.+|.+ .+...+..+ ......+|++|+     ++ |||+|+++++++|+++++
T Consensus       235 ~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~-~~~~~~~d~~k~~~~~l~~-lG~~p~~~~~~~l~~~~~  311 (330)
T 2pzm_A          235 GRPTGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA-PGADDVPSVVLDPSKTETE-FGWKAKVDFKDTITGQLA  311 (330)
T ss_dssp             TCCCEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC-CCTTSCSEECBCCHHHHHH-HCCCCCCCHHHHHHHHHH
T ss_pred             cCCCCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc-chhhccCCHHHHhhchHHH-cCCcccCCHHHHHHHHHH
Confidence            6556799999999999999999999999987 444433333 344567788888     77 999998899999999999


Q ss_pred             HHHHhh
Q 019060          335 DFRLRL  340 (346)
Q Consensus       335 ~~~~~~  340 (346)
                      ||++..
T Consensus       312 ~~~~~~  317 (330)
T 2pzm_A          312 WYDKYG  317 (330)
T ss_dssp             HHHHHC
T ss_pred             HHHhhC
Confidence            998764

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=5.8e-42  Score=303.41  Aligned_cols=291  Identities=21%  Similarity=0.293  Sum_probs=214.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----C-----CCCEEEE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----I-----EVDQIYH  103 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~-----~~d~vi~  103 (346)
                      +|||||||||||++|+++|+++|.++|++++|......  .....   ++. +.+|+.+...     .     ++|+|||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~   74 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFH   74 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---cce-eccccccHHHHHHHHhccccCCCcEEEE
Confidence            58999999999999999999998678999998643221  11111   122 5667665421     1     4999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      +|+....  ...++...+++|+.++.+++++|++.++||||+||..+|+.....+.+|+     ++..|.+.|+.+|.++
T Consensus        75 ~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~-----~~~~p~~~Y~~sK~~~  147 (310)
T 1eq2_A           75 EGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLF  147 (310)
T ss_dssp             CCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHH
T ss_pred             CcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCC-----CCCCCCChhHHHHHHH
Confidence            9987653  45678889999999999999999998889999999999997666677777     4667778999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcc-eeecccHHHHHHHHHHHHhC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQ-TRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~Dva~~i~~~~~~  260 (346)
                      |.+++.++...+++++++||+.+|||+....  ...++..++..+..++.+.++++++. .++++|++|+|++++.++++
T Consensus       148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~  227 (310)
T 1eq2_A          148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN  227 (310)
T ss_dssp             HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence            9999998877789999999999999975321  13577888888888888777777778 89999999999999999987


Q ss_pred             CCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCCCcccCChHHHHhhcCC-cccccHHhHHHHHHHH
Q 019060          261 ENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDPRQRKPDITKATELLGW-EPKIKLRDGLPLMEDD  335 (346)
Q Consensus       261 ~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~~k~~~~lg~-~p~~~~~e~i~~~~~~  335 (346)
                      +.+++||+++++++|+.|+++.+.+.+|.+ .+...+...    ........|++|+++ ||| .|.++++|+++++++|
T Consensus       228 ~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lG~~~~~~~l~~~l~~~~~~  305 (310)
T 1eq2_A          228 GVSGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-AGYDKPFKTVAEGVTEYMAW  305 (310)
T ss_dssp             CCCEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHH-TTCCCCCCCHHHHHHHHHHH
T ss_pred             CCCCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHh-cCCCCCCCCHHHHHHHHHHH
Confidence            667899999999999999999999999976 333222111    112345678899976 999 7888999999999999


Q ss_pred             HHHh
Q 019060          336 FRLR  339 (346)
Q Consensus       336 ~~~~  339 (346)
                      |+++
T Consensus       306 ~~~~  309 (310)
T 1eq2_A          306 LNRD  309 (310)
T ss_dssp             TC--
T ss_pred             HHhc
Confidence            8653

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=5.2e-42  Score=300.29  Aligned_cols=267  Identities=16%  Similarity=0.131  Sum_probs=217.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----C-CCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----E-VDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~-~d~vi~~a  105 (346)
                      +|+||||| +||||++|+++|+++| ++|++++|+....         ..+++++.+|+.+....     + +|+|||+|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g-~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a   71 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQG-HEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVHLRPEILVYCV   71 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCC-CEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence            57999999 5999999999999999 9999999965331         25789999999987654     3 99999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +..     ..++...+++|+.++.+++++|++.++ ||||+||..+||.....+++|+     ++..|.+.|+.+|.++|
T Consensus        72 ~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E  141 (286)
T 3gpi_A           72 AAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDED-----TPPIAKDFSGKRMLEAE  141 (286)
T ss_dssp             HHH-----HHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCC-----CCCCCCChhhHHHHHHH
Confidence            753     245667778899999999999999887 8999999999998777777887     67778899999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC---
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE---  261 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~---  261 (346)
                      .+ +.+     ++++++||+++|||+..        .++..+.. ...  .+.++..++++|++|+|++++.+++++   
T Consensus       142 ~~-~~~-----~~~~ilR~~~v~G~~~~--------~~~~~~~~-~~~--~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~  204 (286)
T 3gpi_A          142 AL-LAA-----YSSTILRFSGIYGPGRL--------RMIRQAQT-PEQ--WPARNAWTNRIHRDDGAAFIAYLIQQRSHA  204 (286)
T ss_dssp             HH-GGG-----SSEEEEEECEEEBTTBC--------HHHHHTTC-GGG--SCSSBCEECEEEHHHHHHHHHHHHHHHTTS
T ss_pred             HH-Hhc-----CCeEEEecccccCCCch--------hHHHHHHh-ccc--CCCcCceeEEEEHHHHHHHHHHHHhhhccC
Confidence            98 543     89999999999999732        23333333 222  256778899999999999999999873   


Q ss_pred             C-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccc-cHHhHHHHHHHHHHHh
Q 019060          262 N-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKI-KLRDGLPLMEDDFRLR  339 (346)
Q Consensus       262 ~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~~~~~~~~  339 (346)
                      . +++||+++++++|+.|+++.+.+.+|.+.++...+   .......+|++|++ .|||+|++ +++|+|+++++|+...
T Consensus       205 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---~~~~~~~~d~~k~~-~lG~~p~~~~l~e~l~~~~~~~~~~  280 (286)
T 3gpi_A          205 VPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP---PVQGNKKLSNARLL-ASGYQLIYPDYVSGYGALLAAMREG  280 (286)
T ss_dssp             CCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC---CBCSSCEECCHHHH-HTTCCCSSCSHHHHHHHHHHHHTC-
T ss_pred             CCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc---ccCCCeEeeHHHHH-HcCCCCcCCcHHHHHHHHHHHHhcc
Confidence            3 78999999999999999999999999877665433   34456778999997 89999999 6999999999998654


Q ss_pred             h
Q 019060          340 L  340 (346)
Q Consensus       340 ~  340 (346)
                      .
T Consensus       281 ~  281 (286)
T 3gpi_A          281 H  281 (286)
T ss_dssp             -
T ss_pred             c
Confidence            3

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=5.1e-41  Score=300.34  Aligned_cols=282  Identities=22%  Similarity=0.328  Sum_probs=224.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----C--CCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----E--VDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~--~d~vi~  103 (346)
                      .+|+|||||||||||++|+++|+++| ++|++++|......+.+..   ..++.++.+|+.+.+..     +  +|+|||
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih   95 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDLQPDAVVH   95 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence            36899999999999999999999999 9999999965332222211   14788999999987533     3  999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccC----CCCCCCCCCCCcCCCCCCCCC-CchH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYG----DPLVHPQDESYWGNVNPIGVR-SCYD  177 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~----~~~~~~~~e~~~~~~~~~~~~-~~Y~  177 (346)
                      +|+..... ...++.  +++|+.++.+++++|.+.++ +|||+||..+|+    .... +++|+     +  .|. ..|+
T Consensus        96 ~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~-----~--~p~~~~Y~  164 (333)
T 2q1w_A           96 TAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHP-----R--NPANSSYA  164 (333)
T ss_dssp             CCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSC-----C--CCTTCHHH
T ss_pred             CceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCC-----C--CCCCCchH
Confidence            99876532 223333  89999999999999999887 999999999998    4444 66666     2  455 7899


Q ss_pred             HhHHHHHHHHHH-HHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          178 EGKRVAETLMFD-YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       178 ~sK~~~E~~~~~-~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      .+|.++|.+++. ++     +++++||+++|||+.   ...+++.++..+..+.  .+++ ++..+++++++|+|++++.
T Consensus       165 ~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~---~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~  233 (333)
T 2q1w_A          165 ISKSANEDYLEYSGL-----DFVTFRLANVVGPRN---VSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVR  233 (333)
T ss_dssp             HHHHHHHHHHHHHTC-----CEEEEEESEEESTTC---CSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhC-----CeEEEeeceEECcCC---cCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHH
Confidence            999999999876 53     799999999999972   2457777777777766  3334 5677899999999999999


Q ss_pred             HHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          257 LMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      +++.+.+++||+++++.+|+.|+++.+.+.+|.+ .+...+...    .......+|++|+++. ||+|+++++++|+++
T Consensus       234 ~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~  311 (333)
T 2q1w_A          234 AVDGVGHGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTIQDF-GKIEFTPLKETVAAA  311 (333)
T ss_dssp             HHTTCCCEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHHHHH-CCCCCCCHHHHHHHH
T ss_pred             HHhcCCCCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHHHhc-CCCcCCCHHHHHHHH
Confidence            9987666799999999999999999999999987 443322211    1114567899999988 999988999999999


Q ss_pred             HHHHHHhh
Q 019060          333 EDDFRLRL  340 (346)
Q Consensus       333 ~~~~~~~~  340 (346)
                      ++||+++.
T Consensus       312 ~~~~~~~~  319 (333)
T 2q1w_A          312 VAYFREYG  319 (333)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHC
Confidence            99998763

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=4.2e-41  Score=298.59  Aligned_cols=281  Identities=19%  Similarity=0.235  Sum_probs=201.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |+|+|||||||||||++|+++|+++| ++|++++|+...           ++  ++.+|+.+....       ++|+|||
T Consensus         1 m~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih   66 (315)
T 2ydy_A            1 MNRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVH   66 (315)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-------------------------------CHHHHHHHCCSEEEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            46899999999999999999999999 999999985322           12  677888886543       4899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      +|+.........++...+++|+.++.+++++|.+.+++|||+||..+|+. ...+++|+     ++..|.+.|+.+|..+
T Consensus        67 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~-~~~~~~E~-----~~~~~~~~Y~~sK~~~  140 (315)
T 2ydy_A           67 CAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDG-TNPPYREE-----DIPAPLNLYGKTKLDG  140 (315)
T ss_dssp             CC-------------------CHHHHHHHHHHHHHTCEEEEEEEGGGSCS-SSCSBCTT-----SCCCCCSHHHHHHHHH
T ss_pred             CCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCC-CCCCCCCC-----CCCCCcCHHHHHHHHH
Confidence            99976544445677888999999999999999998889999999999987 55667777     5666778999999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHH-cCCCeEEecCCcceeecccHHHHHHHHHHHHhCC-
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE-  261 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~-  261 (346)
                      |.+++.+    +++++++||+.+|||..... ..++..++.... .+..+...  ++..++++|++|+|++++.+++++ 
T Consensus       141 e~~~~~~----~~~~~~lR~~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~  213 (315)
T 2ydy_A          141 EKAVLEN----NLGAAVLRIPILYGEVEKLE-ESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRM  213 (315)
T ss_dssp             HHHHHHH----CTTCEEEEECSEECSCSSGG-GSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHh----CCCeEEEeeeeeeCCCCccc-ccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhc
Confidence            9998765    57789999999999975421 134445556566 67766654  356789999999999999988753 


Q ss_pred             ----CCCcEEecCCCCCCHHHHHHHHHHHcCCCcc-eEEccC----CCCCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          262 ----NTGPINIGNPGEFTMLELAENVKELINPNVE-ITMVEN----TPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       262 ----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~-~~~~~~----~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                          .+++||+++++++|+.|+++.+.+.+|.+.. +...+.    ....+....+|++|++++ ||+|.++++++++++
T Consensus       214 ~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p~~~~~~~l~~~  292 (315)
T 2ydy_A          214 LDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL-GIGQRTPFRIGIKES  292 (315)
T ss_dssp             TCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT-TCCCCCCHHHHHHHH
T ss_pred             cccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc-CCCCCCCHHHHHHHH
Confidence                3789999999999999999999999998754 333332    122334567899999987 999999999999999


Q ss_pred             HHHHHHh
Q 019060          333 EDDFRLR  339 (346)
Q Consensus       333 ~~~~~~~  339 (346)
                      ++||+++
T Consensus       293 ~~~~~~~  299 (315)
T 2ydy_A          293 LWPFLID  299 (315)
T ss_dssp             HGGGCC-
T ss_pred             HHHHccc
Confidence            9998765

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=6.5e-41  Score=293.36  Aligned_cols=268  Identities=18%  Similarity=0.152  Sum_probs=214.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      +|+|+|||||| ||||++|+++|+++| ++|++++|+....    .. +...+++++.+|+.+....++|+|||+|+...
T Consensus         3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g-~~V~~~~r~~~~~----~~-~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~   75 (286)
T 3ius_A            3 AMTGTLLSFGH-GYTARVLSRALAPQG-WRIIGTSRNPDQM----EA-IRASGAEPLLWPGEEPSLDGVTHLLISTAPDS   75 (286)
T ss_dssp             --CCEEEEETC-CHHHHHHHHHHGGGT-CEEEEEESCGGGH----HH-HHHTTEEEEESSSSCCCCTTCCEEEECCCCBT
T ss_pred             CCcCcEEEECC-cHHHHHHHHHHHHCC-CEEEEEEcChhhh----hh-HhhCCCeEEEecccccccCCCCEEEECCCccc
Confidence            35789999998 999999999999999 9999999964221    11 11257899999999877668999999998654


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ..    ++         .+.++++++++  .++ ||||+||.++|+.....+++|+     ++..|.+.|+.+|.++|++
T Consensus        76 ~~----~~---------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~-----~~~~p~~~Y~~sK~~~E~~  137 (286)
T 3ius_A           76 GG----DP---------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDET-----TPLTPTAARGRWRVMAEQQ  137 (286)
T ss_dssp             TB----CH---------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTT-----SCCCCCSHHHHHHHHHHHH
T ss_pred             cc----cH---------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCC-----CCCCCCCHHHHHHHHHHHH
Confidence            21    11         24678888888  565 8999999999998777778888     6777888999999999999


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CCc
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGP  265 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~~  265 (346)
                      ++.+   .+++++++||+.+|||+...         +..+..+..+.+.++ ...++|+|++|+|++++.+++++. +++
T Consensus       138 ~~~~---~~~~~~ilRp~~v~G~~~~~---------~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~g~~  204 (286)
T 3ius_A          138 WQAV---PNLPLHVFRLAGIYGPGRGP---------FSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDPGAV  204 (286)
T ss_dssp             HHHS---TTCCEEEEEECEEEBTTBSS---------STTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCTTCE
T ss_pred             HHhh---cCCCEEEEeccceECCCchH---------HHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCCCCE
Confidence            9876   58999999999999997432         223455666666554 577899999999999999999877 569


Q ss_pred             EEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC--CCC------CCcccCChHHHHhhcCCcccc-cHHhHHHHHHHH
Q 019060          266 INIGNPGEFTMLELAENVKELINPNVEITMVENT--PDD------PRQRKPDITKATELLGWEPKI-KLRDGLPLMEDD  335 (346)
Q Consensus       266 ~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~--~~~------~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~~~~  335 (346)
                      ||+++++++|+.|+++.+.+.+|.+.........  ...      .....+|++|+++.|||+|++ +++|+++++++.
T Consensus       205 ~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~~  283 (286)
T 3ius_A          205 YNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQAD  283 (286)
T ss_dssp             EEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHHT
T ss_pred             EEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHHh
Confidence            9999999999999999999999987654332211  111      145567999999999999999 799999999874

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=2.6e-40  Score=293.77  Aligned_cols=290  Identities=25%  Similarity=0.299  Sum_probs=229.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEc
Q 019060           34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHL  104 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~  104 (346)
                      +|||||||||||++|+++|++.  | ++|++++|.....          .++.++.+|+.+.+..       ++|+|||+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~   69 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGK-KNVIASDIVQRDT----------GGIKFITLDVSNRDEIDRAVEKYSIDAIFHL   69 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCG-GGEEEEESSCCCC----------TTCCEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCC-CEEEEecCCCccc----------cCceEEEecCCCHHHHHHHHhhcCCcEEEEC
Confidence            5899999999999999999998  7 9999998864321          1467889999986432       79999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |+.... ....++...+++|+.++.+++++|++.++ +|||+||..+|+... ..+.+|+     .+..|.+.|+.+|.+
T Consensus        70 a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~-----~~~~p~~~Y~~sK~~  143 (317)
T 3ajr_A           70 AGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSI-----TITRPRTMFGVTKIA  143 (317)
T ss_dssp             CCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSS-----SCCCCCSHHHHHHHH
T ss_pred             CcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCcccc-----ccCCCCchHHHHHHH
Confidence            986542 23457788999999999999999999887 999999999998643 2344555     566778899999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      +|.+++.+++..+++++++||+.+||+...+..  ..++...+.....++.+..+++++..++++|++|+|++++.++++
T Consensus       144 ~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~  223 (317)
T 3ajr_A          144 AELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEA  223 (317)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhC
Confidence            999999988888999999999999997643221  223334444455566666667778889999999999999999986


Q ss_pred             CC-----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC---CCCCcccCChHHHHhhcCCcccccHHhHHHHH
Q 019060          261 EN-----TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP---DDPRQRKPDITKATELLGWEPKIKLRDGLPLM  332 (346)
Q Consensus       261 ~~-----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~---~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~  332 (346)
                      +.     +++||+++ +.+|+.|+++.+.+.+|. ..+.+.+...   .......+|++|+++.|||+|+++++++++++
T Consensus       224 ~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~  301 (317)
T 3ajr_A          224 DRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDM  301 (317)
T ss_dssp             CGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCCCCCCHHHHHHHH
T ss_pred             CccccccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCCCCCCHHHHHHHH
Confidence            53     37899986 689999999999999973 3344332100   01123467999999999999999999999999


Q ss_pred             HHHHHHhhcC
Q 019060          333 EDDFRLRLAV  342 (346)
Q Consensus       333 ~~~~~~~~~~  342 (346)
                      ++||+++...
T Consensus       302 ~~~~~~~~~~  311 (317)
T 3ajr_A          302 IDHISEKLGI  311 (317)
T ss_dssp             HHHHHHHTTS
T ss_pred             HHHHHhhhcc
Confidence            9999887654

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=1.9e-40  Score=321.74  Aligned_cols=306  Identities=28%  Similarity=0.470  Sum_probs=245.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-C-----CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-I-----EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~-----~~d~vi~  103 (346)
                      ++|+|||||||||||++|+++|++. | ++|++++|+....    .......++.++.+|+.+... .     ++|+|||
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g-~~V~~~~r~~~~~----~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih  388 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIGSDAI----SRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLP  388 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSS-EEEEEEESCCTTT----GGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCC-CEEEEEEcCchhh----hhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence            4689999999999999999999998 7 9999999965332    222234578999999998642 2     6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCC-CC-CCCCCchHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV-NP-IGVRSCYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~-~~-~~~~~~Y~~sK~  181 (346)
                      +||.........++...++.|+.++.+++++|++.+.||||+||..+|+.....+++|+.+... .+ ..|.+.|+.+|.
T Consensus       389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~  468 (660)
T 1z7e_A          389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ  468 (660)
T ss_dssp             CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHH
T ss_pred             CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHH
Confidence            9997664444567888999999999999999998888999999999999776667777743110 11 145568999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCC------CCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNI------DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      ++|.+++.+++..+++++++||+++|||+...      ....++..++..+..+.++.+.++++..++|+|++|+|++++
T Consensus       469 ~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~  548 (660)
T 1z7e_A          469 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY  548 (660)
T ss_dssp             HHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHH
Confidence            99999999988889999999999999997532      124567788888888988888887888899999999999999


Q ss_pred             HHHhCCC----CCcEEecCCC-CCCHHHHHHHHHHHcCCCcceEEccC---------------CCCCCCcccCChHHHHh
Q 019060          256 RLMEGEN----TGPINIGNPG-EFTMLELAENVKELINPNVEITMVEN---------------TPDDPRQRKPDITKATE  315 (346)
Q Consensus       256 ~~~~~~~----~~~~~~~~~~-~~s~~ei~~~i~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~k~~~  315 (346)
                      .+++.+.    +++||+++++ ++|+.|+++.+.+.+|.+......+.               .........+|++|+++
T Consensus       549 ~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~  628 (660)
T 1z7e_A          549 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHR  628 (660)
T ss_dssp             HHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHH
T ss_pred             HHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcccCHHHHHH
Confidence            9998653    5689999986 89999999999999985432111111               01123456779999999


Q ss_pred             hcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          316 LLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       316 ~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +|||+|+++++++++++++||+++..
T Consensus       629 ~LG~~p~~~l~egl~~~i~~~~~~~~  654 (660)
T 1z7e_A          629 CLDWEPKIDMQETIDETLDFFLRTVD  654 (660)
T ss_dssp             HHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred             hcCCCccCcHHHHHHHHHHHHHhhcc
Confidence            99999988999999999999987764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=3.6e-40  Score=322.22  Aligned_cols=305  Identities=22%  Similarity=0.324  Sum_probs=233.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccC-------CCCE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLI-------EVDQ  100 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~-------~~d~  100 (346)
                      .++|+||||||+||||++|+++|+++| ++|++++|............  ....++.++.+|+.+.+..       ++|+
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence            346899999999999999999999999 99999998654332222111  1234688999999986432       6999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC----CCCCCCCCcCCCCCCCCCCc
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL----VHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~----~~~~~e~~~~~~~~~~~~~~  175 (346)
                      |||+|+..........+...+++|+.++.+++++|++.++ +||++||.++|+...    ..+.+|+     ++..|.+.
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~-----~~~~p~~~  162 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNP  162 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSH
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCcccc-----CCCCCCCh
Confidence            9999997654434456778899999999999999999887 899999999998532    2455665     46667789


Q ss_pred             hHHhHHHHHHHHHHHHHH--hCCceEEEEeccccCCCCCCC--------CccHHHHHHHHHHc-CCCeEEec------CC
Q 019060          176 YDEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAIR-GEPLTVQA------PG  238 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~--~~~~~~ivR~~~i~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~------~~  238 (346)
                      |+.+|.++|.+++.++..  .+++++++||+++|||.....        ...++..+...... +.++.+++      ++
T Consensus       163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  242 (699)
T 1z45_A          163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  242 (699)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCC
Confidence            999999999999998776  689999999999999863210        12455544443332 24555555      56


Q ss_pred             cceeecccHHHHHHHHHHHHhCC------C--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCCh
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGE------N--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDI  310 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~------~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  310 (346)
                      +..++|+|++|+|++++.+++..      .  .++||+++++.+|+.|+++.+.+.+|.+.++...+..........+|+
T Consensus       243 ~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~  322 (699)
T 1z45_A          243 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKP  322 (699)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCC
T ss_pred             CeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCCH
Confidence            78899999999999999988631      2  468999999999999999999999998876655444434445678899


Q ss_pred             HHHHhhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          311 TKATELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       311 ~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +|++++|||+|+++++|+|+++++||+++.
T Consensus       323 ~ka~~~LG~~p~~~l~egl~~~~~w~~~~~  352 (699)
T 1z45_A          323 DRAKRELKWQTELQVEDSCKDLWKWTTENP  352 (699)
T ss_dssp             HHHHHHTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHhcCCCCCCCHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999997753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-39  Score=292.87  Aligned_cols=294  Identities=19%  Similarity=0.207  Sum_probs=234.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC------CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~   98 (346)
                      ++|+||||||+||||++|+++|+++|.      ++|++++|.......     ....++.++.+|+.+...      .++
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~~   87 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEAEKLVEARP   87 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHHHHHHHTCC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHHHHHHhcCC
Confidence            468999999999999999999999983      589999986432211     123468889999998753      279


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-----C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-----A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+|||+|+... .....++...+++|+.++.+++++|++.+     + +||++||..+|+.....+.+|+     ++..|
T Consensus        88 d~vih~A~~~~-~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~-----~~~~~  161 (342)
T 2hrz_A           88 DVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE-----FHTTP  161 (342)
T ss_dssp             SEEEECCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT-----CCCCC
T ss_pred             CEEEECCccCc-ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC-----CCCCC
Confidence            99999998654 22346788899999999999999998875     5 9999999999987656677777     56677


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccC-CCCCCC-CccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG-PRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      .+.|+.+|.++|.+++.++...+++++++|++.+|| |+.... ...++..++.....+..+.++..++...+++|++|+
T Consensus       162 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv  241 (342)
T 2hrz_A          162 LTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSA  241 (342)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHH
Confidence            789999999999999999887789999999999998 654221 135677788888888877766666677889999999


Q ss_pred             HHHHHHHHhCC-----CCCcEEecCCCCCCHHHHHHHHHHHcCCCc--ceEEccCCC----CCCCcccCChHHHHhhcCC
Q 019060          251 VDGLIRLMEGE-----NTGPINIGNPGEFTMLELAENVKELINPNV--EITMVENTP----DDPRQRKPDITKATELLGW  319 (346)
Q Consensus       251 a~~i~~~~~~~-----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~--~~~~~~~~~----~~~~~~~~~~~k~~~~lg~  319 (346)
                      |++++.+++.+     ..++||++ ++.+|+.|+++.+.+.+|.+.  .+...+...    .......+|++|+++ |||
T Consensus       242 a~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~  319 (342)
T 2hrz_A          242 VGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARE-LGF  319 (342)
T ss_dssp             HHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHH-TTC
T ss_pred             HHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHHHHH-cCC
Confidence            99999999865     35789996 578999999999999998764  233322110    011123579999998 999


Q ss_pred             cccccHHhHHHHHHHHHH
Q 019060          320 EPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       320 ~p~~~~~e~i~~~~~~~~  337 (346)
                      +|+++++|+|+++++||+
T Consensus       320 ~p~~~l~e~l~~~~~~~~  337 (342)
T 2hrz_A          320 TAESSFEEIIQVHIEDEL  337 (342)
T ss_dssp             CCCSSHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHhc
Confidence            998899999999999986

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=1.7e-39  Score=291.46  Aligned_cols=300  Identities=19%  Similarity=0.171  Sum_probs=226.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEE-ecccCCcccC-----CCCE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELI-RHDVTEPLLI-----EVDQ  100 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~-~~d~~~~~~~-----~~d~  100 (346)
                      .++|+||||||+||||++|+++|+++| ++|++++|+.... ..+...+   ...++.++ .+|+.+....     ++|+
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTARSASKL-ANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHH-HHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCcccH-HHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            457899999999999999999999999 9999999853211 1111111   11468888 8999987543     6999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHH-cCC-eEEEEecccccCCCCC----CCCCCCCcCC--------
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR-VGA-RILLTSTSEVYGDPLV----HPQDESYWGN--------  166 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~-r~i~~SS~~v~~~~~~----~~~~e~~~~~--------  166 (346)
                      |||+|+....   ..++...+++|+.++.+++++|.+ .++ ||||+||..+|+....    .+++|+.+.+        
T Consensus        87 vih~A~~~~~---~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           87 VAHIASVVSF---SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             EEECCCCCSC---CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             EEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            9999987643   246788999999999999999984 555 9999999999864322    4567775321        


Q ss_pred             ---CCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCc-cHHHHHHHHHHcCCCeEEecCCcc
Q 019060          167 ---VNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDG-RVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       167 ---~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                         ..+..|.+.|+.+|.++|.+++.++++.  +++++++||+++|||....... ..+..++..+..++.+.+.+.+ .
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-P  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-C
T ss_pred             ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-C
Confidence               0123456789999999999999998775  6789999999999997654322 3778888888888877655554 5


Q ss_pred             eeecccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGW  319 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  319 (346)
                      .++++|++|+|++++.+++.+. .|.+++.+++.+|+.|+++.+.+.+|.. .+.. +..........+|++|+++.|||
T Consensus       243 ~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~-~~~~-~~~~~~~~~~~~d~~k~~~~lg~  320 (342)
T 1y1p_A          243 PQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK-TFPA-DFPDQGQDLSKFDTAPSLEILKS  320 (342)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS-CCCC-CCCCCCCCCCEECCHHHHHHHHH
T ss_pred             cCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc-cCCC-CCCccccccccCChHHHHHHHhh
Confidence            6799999999999999998754 5555556678899999999999999875 2211 11111223356799999998887


Q ss_pred             ---cccccHHhHHHHHHHHHH
Q 019060          320 ---EPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       320 ---~p~~~~~e~i~~~~~~~~  337 (346)
                         .+.++++++|+++++||+
T Consensus       321 ~~~~~~~~l~~~l~~~~~~~~  341 (342)
T 1y1p_A          321 LGRPGWRSIEESIKDLVGSET  341 (342)
T ss_dssp             TTCCSCCCHHHHHHHHHCCSC
T ss_pred             cccCCcCCHHHHHHHHHHHhh
Confidence               455699999999999874

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=1.9e-39  Score=290.73  Aligned_cols=301  Identities=20%  Similarity=0.229  Sum_probs=209.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc--chhhhhcCCCCeeEEecccCCcccC-----CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~  103 (346)
                      |+|+||||||+||||++|+++|+++| ++|+++.|+.....  ..+.......++.++.+|+.+....     ++|+|||
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih   86 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKG-YAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH   86 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTT-CEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence            47899999999999999999999999 99999888643211  1111111124688999999987543     6999999


Q ss_pred             cccCCCccccccCh-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeccc-ccCCC-C--CCCCCCCCcCCCCCCCC----
Q 019060          104 LACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSE-VYGDP-L--VHPQDESYWGNVNPIGV----  172 (346)
Q Consensus       104 ~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~-v~~~~-~--~~~~~e~~~~~~~~~~~----  172 (346)
                      +|+....  ...++ ...+++|+.++.+++++|++.+ + ||||+||.. +|+.+ .  ..+.+|+.+...+...|    
T Consensus        87 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  164 (338)
T 2rh8_A           87 VATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPP  164 (338)
T ss_dssp             ESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CC
T ss_pred             eCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCc
Confidence            9986532  22333 3478999999999999999985 6 899999987 44321 1  13677775543222112    


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC------Ccceeeccc
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP------GTQTRSFCY  246 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~  246 (346)
                      ...|+.+|.++|.+++.+++..+++++++||+++|||+........+..+. ....+.... ++.      +...++|+|
T Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~i~  242 (338)
T 2rh8_A          165 TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAM-SLITGNEFL-INGMKGMQMLSGSVSIAH  242 (338)
T ss_dssp             CCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHH-HHHHTCHHH-HHHHHHHHHHHSSEEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-cccccccccccCcccEEE
Confidence            125999999999999998877799999999999999976433222222222 223343221 111      112348999


Q ss_pred             HHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC-CcceEEccCCCCCCCcccCChHHHHhhcCCccccc
Q 019060          247 VSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP-NVEITMVENTPDDPRQRKPDITKATELLGWEPKIK  324 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~  324 (346)
                      ++|+|++++.+++.+. .+.|++++ +.+|+.|+++.+.+.++. +.+....+ .+ ......+|++|+ +.|||+|+++
T Consensus       243 v~Dva~a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~d~~k~-~~lG~~p~~~  318 (338)
T 2rh8_A          243 VEDVCRAHIFVAEKESASGRYICCA-ANTSVPELAKFLSKRYPQYKVPTDFGD-FP-PKSKLIISSEKL-VKEGFSFKYG  318 (338)
T ss_dssp             HHHHHHHHHHHHHCTTCCEEEEECS-EEECHHHHHHHHHHHCTTSCCCCCCTT-SC-SSCSCCCCCHHH-HHHTCCCSCC
T ss_pred             HHHHHHHHHHHHcCCCcCCcEEEec-CCCCHHHHHHHHHHhCCCCCCCCCCCC-CC-cCcceeechHHH-HHhCCCCCCC
Confidence            9999999999998755 67787765 568999999999998762 22211111 11 112367899999 6699999999


Q ss_pred             HHhHHHHHHHHHHHhh
Q 019060          325 LRDGLPLMEDDFRLRL  340 (346)
Q Consensus       325 ~~e~i~~~~~~~~~~~  340 (346)
                      ++|+++++++||++..
T Consensus       319 l~~gl~~~~~~~~~~~  334 (338)
T 2rh8_A          319 IEEIYDESVEYFKAKG  334 (338)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHcC
Confidence            9999999999997653

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=3.9e-38  Score=280.35  Aligned_cols=298  Identities=20%  Similarity=0.243  Sum_probs=205.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC-CCCC--CcchhhhhcC-CCCeeEEecccCCcccC-----CCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTG--SKDNLRKWIG-HPRFELIRHDVTEPLLI-----EVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r-~~~~--~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----~~d~vi  102 (346)
                      +|+|||||||||||++|+++|+++| ++|+++.| +...  ....+..+.. ..++.++.+|+.+....     ++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENG-YSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCC-CEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            4789999999999999999999999 99999988 4311  1111111100 12577889999987543     699999


Q ss_pred             EcccCCCccccccCh-HHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeccccc-CCCC-CCCCCCCCcCCCC---CCCCCC
Q 019060          103 HLACPASPIFYKYNP-VKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEVY-GDPL-VHPQDESYWGNVN---PIGVRS  174 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v~-~~~~-~~~~~e~~~~~~~---~~~~~~  174 (346)
                      |+|+...  ....++ ...+++|+.++.+++++|.+. ++ ||||+||..++ +.+. ..+.+|+.+.+..   +..|..
T Consensus        80 h~A~~~~--~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~  157 (322)
T 2p4h_X           80 HTASPID--FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFG  157 (322)
T ss_dssp             ECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred             EcCCccc--CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccc
Confidence            9997532  222232 458899999999999999987 66 89999998754 3222 2345565332110   012222


Q ss_pred             -chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          175 -CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       175 -~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                       .|+.+|.++|.++.++++.++++++++||+++|||.........+..+ .....+....+ +.  ..++++|++|+|++
T Consensus       158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~-~~~~~g~~~~~-~~--~~~~~i~v~Dva~a  233 (322)
T 2p4h_X          158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKA-LVLVLGKKEQI-GV--TRFHMVHVDDVARA  233 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHH-THHHHSCGGGC-CE--EEEEEEEHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHH-HHHHhCCCccC-cC--CCcCEEEHHHHHHH
Confidence             599999999999999887779999999999999997543222222222 12234443322 11  33489999999999


Q ss_pred             HHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc-CC-CCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          254 LIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVE-NT-PDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       254 i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~-~~-~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      ++.+++.+. .|.|| ++++.+|+.|+++.+.+.++. ..+.... .. ........+|++|+ +.|||+|+++++++++
T Consensus       234 ~~~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~~~~~~l~  310 (322)
T 2p4h_X          234 HIYLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPE-YQILTVDELKEIKGARLPDLNTKKL-VDAGFDFKYTIEDMFD  310 (322)
T ss_dssp             HHHHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTT-SCCCCTTTTTTCCCEECCEECCHHH-HHTTCCCCCCHHHHHH
T ss_pred             HHHHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCC-CCCCCCccccCCCCCcceecccHHH-HHhCCccCCCHHHHHH
Confidence            999998654 56788 566889999999999988742 1211110 00 01113466799999 6699999999999999


Q ss_pred             HHHHHHHHh
Q 019060          331 LMEDDFRLR  339 (346)
Q Consensus       331 ~~~~~~~~~  339 (346)
                      ++++||+++
T Consensus       311 ~~~~~~~~~  319 (322)
T 2p4h_X          311 DAIQCCKEK  319 (322)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999765

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.4e-37  Score=281.43  Aligned_cols=288  Identities=15%  Similarity=0.100  Sum_probs=220.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC----CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----C---CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK----NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----E---VD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~---~d   99 (346)
                      +|+|||||||||||++|+++|+++|.    ++|++++|......      ....+++++.+|+.+.+..     +   +|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d   74 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPLTDVT   74 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence            47999999999999999999999884    79999999654322      1235788999999986432     4   99


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc--CC-eEE-------EEecccccCCC--CCCCCCCCCcCCC
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV--GA-RIL-------LTSTSEVYGDP--LVHPQDESYWGNV  167 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~-r~i-------~~SS~~v~~~~--~~~~~~e~~~~~~  167 (346)
                      +|||+|+...     .++...++.|+.++.+++++|++.  ++ +||       |+||..+||..  ...+++|+.    
T Consensus        75 ~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~----  145 (364)
T 2v6g_A           75 HVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL----  145 (364)
T ss_dssp             EEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS----
T ss_pred             EEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccc----
Confidence            9999998653     467788999999999999999997  66 787       89999999864  245667763    


Q ss_pred             CCCCC-CCchHHhHHHHHHHHHHHHHHhC-CceEEEEeccccCCCCCCCCccHHHHH-HHHH--HcCCCeEEecCCc---
Q 019060          168 NPIGV-RSCYDEGKRVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNIDDGRVVSNF-IAQA--IRGEPLTVQAPGT---  239 (346)
Q Consensus       168 ~~~~~-~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ivR~~~i~G~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~---  239 (346)
                       +..| .+.|    +.+|++++.+++..+ ++++++||+.+|||+.......+++.+ +..+  ..+.++.++++++   
T Consensus       146 -~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~  220 (364)
T 2v6g_A          146 -PRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWD  220 (364)
T ss_dssp             -CCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHH
T ss_pred             -cCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccc
Confidence             3333 4567    458999888876666 999999999999998653223344443 3333  3677776666663   


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceE--EccCC----------------
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLELAENVKELINPNVEIT--MVENT----------------  299 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~--~~~~~----------------  299 (346)
                      ..+++++++|+|++++.+++++.  +++||+++++++|+.|+++.+.+.+|.+....  ..+..                
T Consensus       221 ~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  300 (364)
T 2v6g_A          221 GYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIV  300 (364)
T ss_dssp             SCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHH
T ss_pred             ccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHH
Confidence            44788899999999999998764  55999999999999999999999999765432  22211                


Q ss_pred             ------CC---CC-----------Cc-ccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          300 ------PD---DP-----------RQ-RKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       300 ------~~---~~-----------~~-~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                            +.   ..           .. ..+|++|+++ |||+|.++++|+++++++||++..
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g  361 (364)
T 2v6g_A          301 RENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAYK  361 (364)
T ss_dssp             HHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHcC
Confidence                  11   00           22 4789999987 999998899999999999997653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=6.7e-37  Score=274.10  Aligned_cols=300  Identities=21%  Similarity=0.273  Sum_probs=209.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cC--CCCeeEEecccCCcccC-----CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IG--HPRFELIRHDVTEPLLI-----EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~--~~~~~~~~~d~~~~~~~-----~~d~v  101 (346)
                      ++|+||||||+||||++|+++|+++| ++|+++.|+.... ......  +.  ..++.++.+|+.+....     ++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERG-YTVRATVRDPTNV-KKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCTTCH-HHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCC-CEEEEEECCcchh-HHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            35899999999999999999999999 9999998864321 111111  11  12578899999987643     69999


Q ss_pred             EEcccCCCccccccChH-HHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccc-cCCCC-CCCCCCCCcCCCCC----CCC
Q 019060          102 YHLACPASPIFYKYNPV-KTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEV-YGDPL-VHPQDESYWGNVNP----IGV  172 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v-~~~~~-~~~~~e~~~~~~~~----~~~  172 (346)
                      ||+|+...  ....++. ..+++|+.++.+++++|++.+ + ||||+||..+ |+... ..+.+|+.+...+.    ..+
T Consensus        82 ih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           82 FHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            99998652  2223343 578999999999999999877 5 8999999874 44322 23456654321100    013


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      ...|+.+|.++|.++..+++.++++++++||+++|||+........+...+ ....+.... ... .....|+|++|+|+
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~-~~~~g~~~~-~~~-~~~~~~i~v~Dva~  236 (337)
T 2c29_D          160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITAL-SPITGNEAH-YSI-IRQGQFVHLDDLCN  236 (337)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHT-HHHHTCGGG-HHH-HTEEEEEEHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCCcc-ccc-cCCCCEEEHHHHHH
Confidence            447999999999999988877799999999999999975432222221111 113333221 111 12345999999999


Q ss_pred             HHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC-CcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHH
Q 019060          253 GLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP-NVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLP  330 (346)
Q Consensus       253 ~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~  330 (346)
                      +++.+++++. .+.|++.+ ..+|+.|+++.+.+.++. ..+....+ .........+|++|+ +.|||+|+++++|+++
T Consensus       237 a~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~d~~k~-~~lG~~p~~~l~e~l~  313 (337)
T 2c29_D          237 AHIYLFENPKAEGRYICSS-HDCIILDLAKMLREKYPEYNIPTEFKG-VDENLKSVCFSSKKL-TDLGFEFKYSLEDMFT  313 (337)
T ss_dssp             HHHHHHHCTTCCEEEEECC-EEEEHHHHHHHHHHHCTTSCCCSCCTT-CCTTCCCCEECCHHH-HHHTCCCCCCHHHHHH
T ss_pred             HHHHHhcCcccCceEEEeC-CCCCHHHHHHHHHHHCCCccCCCCCCc-ccCCCccccccHHHH-HHcCCCcCCCHHHHHH
Confidence            9999998755 56776654 668999999999998742 22211111 112234466799999 7899999999999999


Q ss_pred             HHHHHHHHhh
Q 019060          331 LMEDDFRLRL  340 (346)
Q Consensus       331 ~~~~~~~~~~  340 (346)
                      ++++||++..
T Consensus       314 ~~~~~~~~~~  323 (337)
T 2c29_D          314 GAVDTCRAKG  323 (337)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            9999998763

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=3.7e-37  Score=267.58  Aligned_cols=260  Identities=21%  Similarity=0.194  Sum_probs=211.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      |+|||||||||||++++++|+ +| ++|++++|+....          .+   +.+|+.+.+..       ++|+|||+|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a   65 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ER-HEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAA   65 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TT-SCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cC-CeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECC
Confidence            689999999999999999999 48 9999999965211          12   78999886432       499999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      |.........++...+++|+.++.+++++|++.+++||++||..+|+.... +++|+     ++..|.+.|+.+|.++|.
T Consensus        66 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~-~~~e~-----~~~~~~~~Y~~sK~~~e~  139 (273)
T 2ggs_A           66 AMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKG-NYKEE-----DIPNPINYYGLSKLLGET  139 (273)
T ss_dssp             CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSC-SBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             cccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCC-CcCCC-----CCCCCCCHHHHHHHHHHH
Confidence            976544445688899999999999999999998889999999999975433 66776     466677899999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCc
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      +++.      ++++++||+.+||+      ..+...++.....+..+.+.++   .+++++++|+|++++.+++++..|+
T Consensus       140 ~~~~------~~~~~iR~~~v~G~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~~g~  204 (273)
T 2ggs_A          140 FALQ------DDSLIIRTSGIFRN------KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRKTGI  204 (273)
T ss_dssp             HHCC------TTCEEEEECCCBSS------SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTCCEE
T ss_pred             HHhC------CCeEEEeccccccc------cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCcCCe
Confidence            9865      67899999999983      3455666666677777776543   7899999999999999998777789


Q ss_pred             EEecCCCCCCHHHHHHHHHHHcCCCcceEEcc----CCCCCCCcccCChHHHHhhcCCcc-cccHHhHH
Q 019060          266 INIGNPGEFTMLELAENVKELINPNVEITMVE----NTPDDPRQRKPDITKATELLGWEP-KIKLRDGL  329 (346)
Q Consensus       266 ~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~----~~~~~~~~~~~~~~k~~~~lg~~p-~~~~~e~i  329 (346)
                      ||+++ +.+|+.|+++.+.+.+|.+.++....    .....+....+|++|+++.|||+| .+++++++
T Consensus       205 ~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~  272 (273)
T 2ggs_A          205 IHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV  272 (273)
T ss_dssp             EECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred             EEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence            99999 99999999999999999886654322    122234457789999999999999 57898875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=273.77  Aligned_cols=274  Identities=18%  Similarity=0.171  Sum_probs=208.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc-
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI-  111 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~-  111 (346)
                      |||||||||||||++|+++|+++| |+|++++|+....           .+.+  -++......++|+|||+|+..... 
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G-~~V~~l~R~~~~~-----------~~~~--~~~~~~~l~~~d~vihla~~~i~~~   66 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARG-HEVTLVSRKPGPG-----------RITW--DELAASGLPSCDAAVNLAGENILNP   66 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCTT-----------EEEH--HHHHHHCCCSCSEEEECCCCCSSCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCcC-----------eeec--chhhHhhccCCCEEEEeccCcccch
Confidence            899999999999999999999999 9999999954211           1111  111122344799999999743211 


Q ss_pred             ---ccccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          112 ---FYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       112 ---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                         .........++.|+.++.+++++++..+.   +||+.||.++||.....+.+|+     ++..+.+.|+..|...|.
T Consensus        67 ~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~-----~p~~~~~~~~~~~~~~e~  141 (298)
T 4b4o_A           67 LRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDED-----SPGGDFDFFSNLVTKWEA  141 (298)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTT-----CCCSCSSHHHHHHHHHHH
T ss_pred             hhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCccccc-----CCccccchhHHHHHHHHH
Confidence               12233456778999999999999998875   4899999999998888888888     577777788888887776


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CC
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TG  264 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~  264 (346)
                      ..  .....+++++++|++.+|||+     ...+..++.....+.... .+++++.++|||++|+|++++.+++++. .|
T Consensus       142 ~~--~~~~~~~~~~~~r~~~v~g~~-----~~~~~~~~~~~~~~~~~~-~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g  213 (298)
T 4b4o_A          142 AA--RLPGDSTRQVVVRSGVVLGRG-----GGAMGHMLLPFRLGLGGP-IGSGHQFFPWIHIGDLAGILTHALEANHVHG  213 (298)
T ss_dssp             HH--CCSSSSSEEEEEEECEEECTT-----SHHHHHHHHHHHTTCCCC-BTTSCSBCCEEEHHHHHHHHHHHHHCTTCCE
T ss_pred             HH--HhhccCCceeeeeeeeEEcCC-----CCchhHHHHHHhcCCcce-ecccCceeecCcHHHHHHHHHHHHhCCCCCC
Confidence            43  233457899999999999996     345666666555555444 4888999999999999999999998876 88


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCC-----------CCCcccCChHHHHhhcCCcccc-cHHhHHHHH
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEITMVENTPD-----------DPRQRKPDITKATELLGWEPKI-KLRDGLPLM  332 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~  332 (346)
                      +||+++++++|+.|+++.+++.+|++..+. +|.+..           .......+++|++ ++||++++ +++++++++
T Consensus       214 ~yn~~~~~~~t~~e~~~~ia~~lgrp~~~p-vP~~~~~~~~g~~~~~~~l~~~rv~~~kl~-~~Gf~f~yp~l~~al~~l  291 (298)
T 4b4o_A          214 VLNGVAPSSATNAEFAQTFGAALGRRAFIP-LPSAVVQAVFGRQRAIMLLEGQKVIPRRTL-ATGYQYSFPELGAALKEI  291 (298)
T ss_dssp             EEEESCSCCCBHHHHHHHHHHHHTCCCCCC-BCHHHHHHHHCHHHHHHHHCCCCBCCHHHH-HTTCCCSCCSHHHHHHHH
T ss_pred             eEEEECCCccCHHHHHHHHHHHhCcCCccc-CCHHHHHHHhcchhHHHhhCCCEEcHHHHH-HCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999865332 221100           0012335678886 58999998 699999999


Q ss_pred             HHH
Q 019060          333 EDD  335 (346)
Q Consensus       333 ~~~  335 (346)
                      ++.
T Consensus       292 ~~~  294 (298)
T 4b4o_A          292 AEN  294 (298)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            873

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.8e-36  Score=284.39  Aligned_cols=277  Identities=18%  Similarity=0.142  Sum_probs=203.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc---ccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP---LLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~d~vi~~a~~~  108 (346)
                      +|+|||||||||||++|+++|++.| ++|++++|+....             ..+.+|+.+.   ...++|+|||+|+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G-~~V~~l~R~~~~~-------------~~v~~d~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGG-HEVIQLVRKEPKP-------------GKRFWDPLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSSCCT-------------TCEECCTTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCCc-------------cceeecccchhHHhcCCCCEEEECCCCc
Confidence            6899999999999999999999999 9999999965331             1244555433   334799999999875


Q ss_pred             Ccc-ccccChHHHHHHHHHHHHHHHHH-HHHcCC-eEEEEecccccC-CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          109 SPI-FYKYNPVKTIKTNVIGTLNMLGL-AKRVGA-RILLTSTSEVYG-DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       109 ~~~-~~~~~~~~~~~~n~~~~~~l~~~-~~~~~~-r~i~~SS~~v~~-~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      ... .....+...+++|+.++.+++++ ++..++ +|||+||.++|| .....+++|+     .+. +.+.|+.+|...|
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~-----~~~-~~~~y~~~~~~~E  286 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEE-----SES-GDDFLAEVCRDWE  286 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTT-----SCC-CSSHHHHHHHHHH
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCC-----CCC-CcChHHHHHHHHH
Confidence            432 23456778889999999999999 566666 899999999998 4445567776     333 6678999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-C
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-T  263 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~  263 (346)
                      ..+... ...+++++++||+.+|||+     ..++..++..+..+... ..++++..++|+|++|+|++++.+++++. .
T Consensus       287 ~~~~~~-~~~gi~~~ilRp~~v~Gp~-----~~~~~~~~~~~~~g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~  359 (516)
T 3oh8_A          287 HATAPA-SDAGKRVAFIRTGVALSGR-----GGMLPLLKTLFSTGLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS  359 (516)
T ss_dssp             HTTHHH-HHTTCEEEEEEECEEEBTT-----BSHHHHHHHTTC---CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTTCC
T ss_pred             HHHHHH-HhCCCCEEEEEeeEEECCC-----CChHHHHHHHHHhCCCc-ccCCCCceEceEeHHHHHHHHHHHHhCcccC
Confidence            886544 4568999999999999996     34566666554444433 45778889999999999999999998775 7


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCC-------CcccCChHHHHhhcCCccccc-HHhHHHH
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDP-------RQRKPDITKATELLGWEPKIK-LRDGLPL  331 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~-------~~~~~~~~k~~~~lg~~p~~~-~~e~i~~  331 (346)
                      |.||+++++++|+.|+++.+.+.+|.+..+.......    ...       .....+++|++ .|||+|+++ ++++|++
T Consensus       360 g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~-~lG~~~~~~~l~e~l~~  438 (516)
T 3oh8_A          360 GPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALE-NLSHTFRYTDIGAAIAH  438 (516)
T ss_dssp             EEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHH-HTTCCCSCSSHHHHHHH
T ss_pred             CcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHH-HCCCCCCCCCHHHHHHH
Confidence            8999999999999999999999999765332211110    011       12334778887 589999986 9999999


Q ss_pred             HHHHH
Q 019060          332 MEDDF  336 (346)
Q Consensus       332 ~~~~~  336 (346)
                      +++..
T Consensus       439 ~l~~~  443 (516)
T 3oh8_A          439 ELGYE  443 (516)
T ss_dssp             HHTCC
T ss_pred             HhCcc
Confidence            98753

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=1.4e-34  Score=267.23  Aligned_cols=298  Identities=18%  Similarity=0.149  Sum_probs=217.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc--chh----hhh-------cCCCCeeEEecccCCccc---
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK--DNL----RKW-------IGHPRFELIRHDVTEPLL---   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~----~~~-------~~~~~~~~~~~d~~~~~~---   95 (346)
                      +|+|||||||||||++|+++|++.| ++|++++|+.....  ..+    ...       ....++.++.+|+.+...   
T Consensus        69 ~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~  147 (427)
T 4f6c_A           69 LGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL  147 (427)
T ss_dssp             CEEEEEECTTSHHHHHHHHHHTTTE-EEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHcCC-CEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence            5799999999999999999999999 99999999753110  011    000       012578999999998643   


Q ss_pred             -CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC-----CCCCCCCCCCcCCCCC
Q 019060           96 -IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD-----PLVHPQDESYWGNVNP  169 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~-----~~~~~~~e~~~~~~~~  169 (346)
                       .++|+|||+|+...   ...++...+++|+.++.+++++|.+...+|||+||..+ |.     ....+++|+++..  +
T Consensus       148 ~~~~d~Vih~A~~~~---~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~--~  221 (427)
T 4f6c_A          148 PENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK--G  221 (427)
T ss_dssp             SSCCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS--S
T ss_pred             cCCCCEEEECCcccC---CCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCcccccccccc--C
Confidence             36999999998764   23566778899999999999999993349999999998 53     2345566664321  2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-----ccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ..+.+.|+.+|+.+|.+++.+++ .+++++++||++|||+......     ..++..++.....+..+.. +.++..+++
T Consensus       222 ~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  299 (427)
T 4f6c_A          222 QLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDF  299 (427)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECC
T ss_pred             CCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEE
Confidence            44778999999999999998764 5899999999999999764321     2457778888777776664 345788999


Q ss_pred             ccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC------------------CCCCc
Q 019060          245 CYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP------------------DDPRQ  305 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~------------------~~~~~  305 (346)
                      ++++|+|++++.++..+. +++||+++++++++.|+++.+.+ +|  .+....+.+.                  .....
T Consensus       300 v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  376 (427)
T 4f6c_A          300 SFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLTSVDREQQL  376 (427)
T ss_dssp             EEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEE
T ss_pred             eeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhhhccccCCc
Confidence            999999999999998775 78999999999999999999998 66  2222111100                  01112


Q ss_pred             ccCChHHHH---hhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          306 RKPDITKAT---ELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       306 ~~~~~~k~~---~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      ..+|.++..   +.+||.+...-++.++++++++.+..+
T Consensus       377 ~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~  415 (427)
T 4f6c_A          377 AMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN  415 (427)
T ss_dssp             CEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             eeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            445666655   457998874446699999999988764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=4.1e-34  Score=269.51  Aligned_cols=299  Identities=18%  Similarity=0.155  Sum_probs=218.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc--h----hhhh-------cCCCCeeEEecccCCcccC-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD--N----LRKW-------IGHPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~----~~~~-------~~~~~~~~~~~d~~~~~~~-   96 (346)
                      .+|+|||||||||||++|+++|++.| ++|++++|.......  .    +..+       ....++.++.+|+.+...+ 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYS-HRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTE-EEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcC-CEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence            35799999999999999999998888 999999996542100  0    1000       1135899999999995433 


Q ss_pred             ---CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCC-----CCCCCCCCCCcCCCC
Q 019060           97 ---EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD-----PLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~-----~~~~~~~e~~~~~~~  168 (346)
                         ++|+|||+|+...   ...++...+++|+.++.+++++|++.+.+|||+||.++ |.     ....+++|+++..  
T Consensus       228 ~~~~~D~Vih~Aa~~~---~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~--  301 (508)
T 4f6l_B          228 LPENMDTIIHAGARTD---HFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYK--  301 (508)
T ss_dssp             CSSCCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCT-TSEECTTCSCCEECTTCSCS--
T ss_pred             CccCCCEEEECCceec---CCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhh-ccCCccCCcCcccccccccc--
Confidence               6999999998754   23456677789999999999999994459999999999 43     2344566664321  


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC-----CccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-----DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +..+.+.|+.+|+.+|.+++.+++ .+++++|+||+.|||+.....     ....+..++.....++.++. +.++..++
T Consensus       302 ~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~  379 (508)
T 4f6l_B          302 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVD  379 (508)
T ss_dssp             SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEE
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEE
Confidence            234678899999999999998764 699999999999999976432     12357778877777766654 34578899


Q ss_pred             cccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC------------------CCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENT------------------PDDPR  304 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~------------------~~~~~  304 (346)
                      |++++|+|++++.++..+. +++||+++++++++.|+++.+.+..   .+....+.+                  .....
T Consensus       380 ~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~  456 (508)
T 4f6l_B          380 FSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTSVDREQQ  456 (508)
T ss_dssp             CEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSE
T ss_pred             EEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcccccccCc
Confidence            9999999999999998775 7899999999999999999999754   222111100                  00111


Q ss_pred             cccCChHHHH---hhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          305 QRKPDITKAT---ELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       305 ~~~~~~~k~~---~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      ...+|+++..   +.+||.+...-++.++++++++.+..+
T Consensus       457 ~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~  496 (508)
T 4f6l_B          457 LAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFN  496 (508)
T ss_dssp             ECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred             ceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            2345665554   456988875558889999999888754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.2e-33  Score=260.30  Aligned_cols=257  Identities=18%  Similarity=0.155  Sum_probs=194.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc---CCCeEEEEeCCCCCCc--chhhhhcC--------------CCCeeEEecccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYFTGSK--DNLRKWIG--------------HPRFELIRHDVT   91 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~---g~~~V~~~~r~~~~~~--~~~~~~~~--------------~~~~~~~~~d~~   91 (346)
                      .+|+|||||||||||++|+++|++.   | ++|++++|+.....  ..+...+.              ..++.++.+|+.
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g-~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVD-GRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTT-CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCC-CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            4789999999999999999999999   8 99999999653211  11111111              257999999998


Q ss_pred             Cccc-----------CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCC
Q 019060           92 EPLL-----------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        92 ~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~  159 (346)
                      ++.+           .++|+|||+|+....    ..+...+++|+.++.+++++|++.++ +|||+||.++|+.....++
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~  226 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF  226 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTC
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCc
Confidence            6542           159999999997653    45556779999999999999999887 8999999999998777777


Q ss_pred             CCCCcCCCC------CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCC---CCccHHHHHHHHHHcCC
Q 019060          160 DESYWGNVN------PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI---DDGRVVSNFIAQAIRGE  230 (346)
Q Consensus       160 ~e~~~~~~~------~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~  230 (346)
                      +|+......      .....+.|+.+|+.+|.+++.+++..+++++++||++|||+....   ....++..++......+
T Consensus       227 ~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g  306 (478)
T 4dqv_A          227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATG  306 (478)
T ss_dssp             CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHC
T ss_pred             CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcC
Confidence            777321000      001124599999999999999988789999999999999985421   12456666666555433


Q ss_pred             CeEEe--cC------CcceeecccHHHHHHHHHHHHhC----CC--CCcEEecCCCC--CCHHHHHHHHHHHcCCCcce
Q 019060          231 PLTVQ--AP------GTQTRSFCYVSDMVDGLIRLMEG----EN--TGPINIGNPGE--FTMLELAENVKELINPNVEI  293 (346)
Q Consensus       231 ~~~~~--~~------~~~~~~~v~v~Dva~~i~~~~~~----~~--~~~~~~~~~~~--~s~~ei~~~i~~~~g~~~~~  293 (346)
                      ..+..  ..      ++..++++|++|+|++++.++.+    +.  +++||+++++.  +|+.|+++.+.+. |.+...
T Consensus       307 ~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~  384 (478)
T 4dqv_A          307 IAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRR  384 (478)
T ss_dssp             EEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEE
T ss_pred             cccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCccc
Confidence            22211  11      15678999999999999999875    22  67999999988  9999999999995 766543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=3.6e-33  Score=244.20  Aligned_cols=252  Identities=15%  Similarity=0.157  Sum_probs=193.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      |+|||||||||||++++++|+++  | ++|++++|+..... .+.    ..++.++.+|+.|.+.     .++|+|||+|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~-~l~----~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   74 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVRNVEKAS-TLA----DQGVEVRHGDYNQPESLQKAFAGVSKLLFIS   74 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTTH-HHH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEcCHHHHh-HHh----hcCCeEEEeccCCHHHHHHHHhcCCEEEEcC
Confidence            68999999999999999999998  8 99999999643221 111    2468899999998643     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +...     .   .  +.|+.++.+++++|++.++ ||||+||..++..               +    ..|+.+|..+|
T Consensus        75 ~~~~-----~---~--~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~---------------~----~~y~~~K~~~E  125 (287)
T 2jl1_A           75 GPHY-----D---N--TLLIVQHANVVKAARDAGVKHIAYTGYAFAEES---------------I----IPLAHVHLATE  125 (287)
T ss_dssp             CCCS-----C---H--HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC---------------C----STHHHHHHHHH
T ss_pred             CCCc-----C---c--hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC---------------C----CchHHHHHHHH
Confidence            7521     1   1  5789999999999999998 9999999988621               1    25999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--  262 (346)
                      .+++.    .+++++++||+.++|+..    ..++...   ...+. .. ...++..++++|++|+|++++.+++++.  
T Consensus       126 ~~~~~----~~~~~~ilrp~~~~~~~~----~~~~~~~---~~~~~-~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~  192 (287)
T 2jl1_A          126 YAIRT----TNIPYTFLRNALYTDFFV----NEGLRAS---TESGA-IV-TNAGSGIVNSVTRNELALAAATVLTEEGHE  192 (287)
T ss_dssp             HHHHH----TTCCEEEEEECCBHHHHS----SGGGHHH---HHHTE-EE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSCT
T ss_pred             HHHHH----cCCCeEEEECCEeccccc----hhhHHHH---hhCCc-ee-ccCCCCccCccCHHHHHHHHHHHhcCCCCC
Confidence            98853    589999999999887641    1122222   12233 33 3456778899999999999999998754  


Q ss_pred             CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC--------CCC----------------CcccCChHHHHhhcC
Q 019060          263 TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP--------DDP----------------RQRKPDITKATELLG  318 (346)
Q Consensus       263 ~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~--------~~~----------------~~~~~~~~k~~~~lg  318 (346)
                      ++.||+++++.+|+.|+++.+.+.+|.+.++...+...        ..+                .....|++++++.||
T Consensus       193 g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG  272 (287)
T 2jl1_A          193 NKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG  272 (287)
T ss_dssp             TEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS
T ss_pred             CcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC
Confidence            56899999999999999999999999887766544210        001                124567889999999


Q ss_pred             CcccccHHhHHHHHHH
Q 019060          319 WEPKIKLRDGLPLMED  334 (346)
Q Consensus       319 ~~p~~~~~e~i~~~~~  334 (346)
                        |.++++|+++++++
T Consensus       273 --~~~~l~e~l~~~~~  286 (287)
T 2jl1_A          273 --SLTPLKETVKQALK  286 (287)
T ss_dssp             --SCCCHHHHHHHHHT
T ss_pred             --CCCCHHHHHHHHhc
Confidence              66699999999875

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=2.1e-32  Score=245.13  Aligned_cols=229  Identities=21%  Similarity=0.289  Sum_probs=186.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      .+|+||||||||+||++|+++|++. | + +|++++|+... ...+...+...++.++.+|+.|.+.     .++|+|||
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g-~~~V~~~~r~~~~-~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih   97 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTN-AKKIIVYSRDELK-QSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH   97 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCC-CSEEEEEESCHHH-HHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCC-CCEEEEEECChhh-HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence            4689999999999999999999999 9 6 99999985321 1122222334579999999998743     37999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      +||.........++...+++|+.++.+++++|.+.++ +||++||..++                   .|.+.|+.+|.+
T Consensus        98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~-------------------~p~~~Y~~sK~~  158 (344)
T 2gn4_A           98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA-------------------NPINLYGATKLC  158 (344)
T ss_dssp             CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS-------------------SCCSHHHHHHHH
T ss_pred             CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC-------------------CCccHHHHHHHH
Confidence            9997654445567889999999999999999999998 89999997654                   234679999999


Q ss_pred             HHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCC-CeEEecCCcceeecccHHHHHHHHHHHH
Q 019060          183 AETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       183 ~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      +|.+++.++..   .+++++++||+++||+.     .++++.++..+..|+ ++.+. ++...++|+|++|+|++++.++
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~-----~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSR-----GSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCT-----TSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCC-----CCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHH
Confidence            99999887653   47999999999999986     457778888888887 77764 6677889999999999999999


Q ss_pred             hCCC-CCcEEecCCCCCCHHHHHHHHHHHc
Q 019060          259 EGEN-TGPINIGNPGEFTMLELAENVKELI  287 (346)
Q Consensus       259 ~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~  287 (346)
                      ++.. +++|++.++ .+++.|+++.+.+.+
T Consensus       233 ~~~~~g~~~~~~~~-~~s~~el~~~i~~~~  261 (344)
T 2gn4_A          233 KRMHGGEIFVPKIP-SMKMTDLAKALAPNT  261 (344)
T ss_dssp             HHCCSSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred             hhccCCCEEecCCC-cEEHHHHHHHHHHhC
Confidence            8766 458888765 699999999998654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=100.00  E-value=6e-33  Score=242.64  Aligned_cols=251  Identities=15%  Similarity=0.166  Sum_probs=188.1

Q ss_pred             EEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~  106 (346)
                      +|||||||||||++++++|+++  | ++|++++|+..... .+.    ..++.++.+|+.+.+.     .++|+|||+|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r~~~~~~-~~~----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPA-SQIVAIVRNPAKAQ-ALA----AQGITVRQADYGDEAALTSALQGVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCG-GGEEEEESCTTTCH-HHH----HTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCC-ceEEEEEcChHhhh-hhh----cCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            5899999999999999999998  8 99999999653221 111    2468899999998643     37999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      ...            ..|+.++.+++++|++.++ |||++||..+|.               .+    ..|+.+|..+|.
T Consensus        75 ~~~------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~---------------~~----~~y~~sK~~~e~  123 (286)
T 2zcu_A           75 SEV------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT---------------SP----LGLADEHIETEK  123 (286)
T ss_dssp             -------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT---------------CC----STTHHHHHHHHH
T ss_pred             CCc------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC---------------Cc----chhHHHHHHHHH
Confidence            421            2478899999999999887 899999998762               11    359999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      +++.    .+++++++||+.++++.     .    .++.....++.+. .+.++..++++|++|+|++++.++.++.  +
T Consensus       124 ~~~~----~~~~~~ilrp~~~~~~~-----~----~~~~~~~~~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g  189 (286)
T 2zcu_A          124 MLAD----SGIVYTLLRNGWYSENY-----L----ASAPAALEHGVFI-GAAGDGKIASATRADYAAAAARVISEAGHEG  189 (286)
T ss_dssp             HHHH----HCSEEEEEEECCBHHHH-----H----TTHHHHHHHTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSCTT
T ss_pred             HHHH----cCCCeEEEeChHHhhhh-----H----HHhHHhhcCCcee-ccCCCCccccccHHHHHHHHHHHhcCCCCCC
Confidence            8854    58999999998776642     1    1122233333344 4556788999999999999999998754  6


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC--------CCC----------------CcccCChHHHHhhcCC
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVENTP--------DDP----------------RQRKPDITKATELLGW  319 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~--------~~~----------------~~~~~~~~k~~~~lg~  319 (346)
                      +.||+++++.+|+.|+++.+.+.+|.+.++...+...        ..+                .....+++++++.|||
T Consensus       190 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~  269 (286)
T 2zcu_A          190 KVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGH  269 (286)
T ss_dssp             CEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTS
T ss_pred             ceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCc
Confidence            6899999999999999999999999887765544210        011                1245678899999997


Q ss_pred             cccccHHhHHHHHHHHH
Q 019060          320 EPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       320 ~p~~~~~e~i~~~~~~~  336 (346)
                      .| ++++|+++++++||
T Consensus       270 ~~-~~~~e~l~~~~~~~  285 (286)
T 2zcu_A          270 PT-TTLAESVSHLFNVN  285 (286)
T ss_dssp             CC-CCHHHHHHGGGC--
T ss_pred             CC-CCHHHHHHHHHhhc
Confidence            54 59999999999887

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=1.3e-32  Score=238.16  Aligned_cols=228  Identities=23%  Similarity=0.246  Sum_probs=184.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~  106 (346)
                      +|+|||||||||||++|+++|++.| ++|++++|+.....        ..++.++.+|+.+.+.     .++|+|||+|+
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   72 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLA-HEVRLSDIVDLGAA--------EAHEEIVACDLADAQAVHDLVKDCDGIIHLGG   72 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTE-EEEEECCSSCCCCC--------CTTEEECCCCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCC-CEEEEEeCCCcccc--------CCCccEEEccCCCHHHHHHHHcCCCEEEECCc
Confidence            4689999999999999999999999 99999999653211        1367889999998643     36999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCC-CCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      ..    ........+++|+.++.++++++++.++ ||||+||..+|+.. ...+++|+     ++..|...|+.+|..+|
T Consensus        73 ~~----~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~-----~~~~~~~~Y~~sK~~~e  143 (267)
T 3ay3_A           73 VS----VERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTE-----VPRRPDSLYGLSKCFGE  143 (267)
T ss_dssp             CC----SCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             CC----CCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            65    2355678889999999999999999887 99999999999863 34567777     56677789999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--  262 (346)
                      .+++.+....+++++++||+.+|+..     .                    .+...+++++++|+|++++.+++.+.  
T Consensus       144 ~~~~~~~~~~gi~~~~lrp~~v~~~~-----~--------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  198 (267)
T 3ay3_A          144 DLASLYYHKFDIETLNIRIGSCFPKP-----K--------------------DARMMATWLSVDDFMRLMKRAFVAPKLG  198 (267)
T ss_dssp             HHHHHHHHTTCCCEEEEEECBCSSSC-----C--------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCC
T ss_pred             HHHHHHHHHcCCCEEEEeceeecCCC-----C--------------------CCCeeeccccHHHHHHHHHHHHhCCCCC
Confidence            99998887789999999999999421     0                    11234689999999999999998765  


Q ss_pred             CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHH
Q 019060          263 TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMED  334 (346)
Q Consensus       263 ~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~  334 (346)
                      .++|++.++.                               .....+..++ +.|||+|+++++++++++.+
T Consensus       199 ~~~~~~~~~~-------------------------------~~~~~d~~~~-~~lg~~p~~~~~~~~~~~~~  238 (267)
T 3ay3_A          199 CTVVYGASAN-------------------------------TESWWDNDKS-AFLGWVPQDSSEIWREEIEQ  238 (267)
T ss_dssp             EEEEEECCSC-------------------------------SSCCBCCGGG-GGGCCCCCCCGGGGHHHHHH
T ss_pred             ceeEecCCCc-------------------------------cccccCHHHH-HHcCCCCCCCHHHHHHHHHh
Confidence            3567765432                               1234577777 78999999999999998865

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1.7e-33  Score=255.08  Aligned_cols=248  Identities=23%  Similarity=0.305  Sum_probs=197.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      |+|||||||||||++|+++|+++| + +|++++|..  ..+.+.+.                 ..++|+|||+|+...+ 
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g-~~~v~~~d~~~--d~~~l~~~-----------------~~~~d~Vih~a~~~~~-   59 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTT-DHHIFEVHRQT--KEEELESA-----------------LLKADFIVHLAGVNRP-   59 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHC-CCEEEECCTTC--CHHHHHHH-----------------HHHCSEEEECCCSBCT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CCEEEEECCCC--CHHHHHHH-----------------hccCCEEEECCcCCCC-
Confidence            799999999999999999999999 7 999998831  11122111                 1148999999987653 


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHH
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (346)
                         .++...++.|+.++.+++++|++.++  +|||+||..+|+                    .+.|+.+|.++|++++.
T Consensus        60 ---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------------~~~Y~~sK~~~E~~~~~  116 (369)
T 3st7_A           60 ---EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------------DNPYGESKLQGEQLLRE  116 (369)
T ss_dssp             ---TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------------CSHHHHHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------------CCCchHHHHHHHHHHHH
Confidence               34455667899999999999999885  799999999985                    26799999999999999


Q ss_pred             HHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CCcE
Q 019060          190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPI  266 (346)
Q Consensus       190 ~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~  266 (346)
                      ++++.+++++++||+++|||+..+..++++..++..+..+..+.+ .+++..++++|++|+|++++.+++.+.   ++.|
T Consensus       117 ~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~  195 (369)
T 3st7_A          117 YAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVP  195 (369)
T ss_dssp             HHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEE
T ss_pred             HHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceE
Confidence            998889999999999999998776667789999998888888776 467888999999999999999998876   4789


Q ss_pred             EecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHH
Q 019060          267 NIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPL  331 (346)
Q Consensus       267 ~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~  331 (346)
                      |+++++.+|+.|+++.+.+.+|.+..+...+.    .  ...........++|.|..+++++++.
T Consensus       196 ~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~----~--~~~~~~l~~~~l~~~p~~~~~~~l~~  254 (369)
T 3st7_A          196 TVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKL----D--NLFEKDLYSTYLSYLPSTDFSYPLLM  254 (369)
T ss_dssp             CCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCT----T--SHHHHHHHHHHHHTSCTTCSCCCCCE
T ss_pred             EeCCCCceeHHHHHHHHHHHhCCCcccccCCC----C--CHHHHHHHHHHhcccCCcceeechhh
Confidence            99999999999999999999987644332111    0  11122334456889888777665543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.1e-32  Score=232.91  Aligned_cols=216  Identities=15%  Similarity=0.091  Sum_probs=165.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~  106 (346)
                      +|+|||||||||||++|+++|+++| ++|++++|+......    .  ..+++++.+|+.+.+.     .++|+|||+|+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~----~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~   76 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKI----E--NEHLKVKKADVSSLDEVCEVCKGADAVISAFN   76 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCC----C--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchh----c--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCc
Confidence            5899999999999999999999999 999999996432211    1  1578999999998753     37999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      ....     + ...++.|+.++.+++++|++.++ ||||+||..+++...... .|+     .+..|.+.|+.+|..+|.
T Consensus        77 ~~~~-----~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-~~~-----~~~~p~~~Y~~sK~~~e~  144 (227)
T 3dhn_A           77 PGWN-----N-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLR-LMD-----SGEVPENILPGVKALGEF  144 (227)
T ss_dssp             C------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEE-GGG-----TTCSCGGGHHHHHHHHHH
T ss_pred             CCCC-----C-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCc-ccc-----CCcchHHHHHHHHHHHHH
Confidence            5421     1 12567899999999999999997 999999998765433222 222     466677889999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      +++.+++..+++++++||+.+|||+......          ..+....+. .++. ++++|++|+|++++.+++++.  +
T Consensus       145 ~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~----------~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g  212 (227)
T 3dhn_A          145 YLNFLMKEKEIDWVFFSPAADMRPGVRTGRY----------RLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQ  212 (227)
T ss_dssp             HHHTGGGCCSSEEEEEECCSEEESCCCCCCC----------EEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCS
T ss_pred             HHHHHhhccCccEEEEeCCcccCCCccccce----------eecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccC
Confidence            9988887779999999999999997543211          122222222 2222 799999999999999999887  6


Q ss_pred             CcEEecCCCCCCHHH
Q 019060          264 GPINIGNPGEFTMLE  278 (346)
Q Consensus       264 ~~~~~~~~~~~s~~e  278 (346)
                      +.|+++++++.++.+
T Consensus       213 ~~~~~~~~~~~~~~~  227 (227)
T 3dhn_A          213 ERFTIGYLEHHHHHH  227 (227)
T ss_dssp             EEEEEECCSCCC---
T ss_pred             cEEEEEeehhcccCC
Confidence            799999999988753

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.2e-31  Score=240.74  Aligned_cols=274  Identities=13%  Similarity=0.124  Sum_probs=194.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhh--hhcCCCCeeEEecccCCccc-----C--CCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTEPLL-----I--EVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~-----~--~~d~vi  102 (346)
                      +|+|||||||||||++|+++|++.| ++|++++|+.........  ..+...++.++.+|+.|.+.     .  ++|+||
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi   88 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV   88 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence            5799999999999999999999999 999999997533332222  11223589999999998643     2  799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      |+++..               |+.++.+++++|++.+ + +||+ |   +||.    +.+|.     ++..|...|+.+|
T Consensus        89 ~~a~~~---------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~-----~~~~p~~~y~~sK  140 (346)
T 3i6i_A           89 STVGGE---------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRA-----DPVEPGLNMYREK  140 (346)
T ss_dssp             ECCCGG---------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTC-----CCCTTHHHHHHHH
T ss_pred             ECCchh---------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCcc-----CcCCCcchHHHHH
Confidence            999752               7788999999999999 7 6664 4   3542    23333     4556778899999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ..+|++++.    .+++++++||+.++|.....    +.. .......++.+.++++++..++|++++|+|++++.++..
T Consensus       141 ~~~e~~l~~----~g~~~tivrpg~~~g~~~~~----~~~-~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~  211 (346)
T 3i6i_A          141 RRVRQLVEE----SGIPFTYICCNSIASWPYYN----NIH-PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD  211 (346)
T ss_dssp             HHHHHHHHH----TTCCBEEEECCEESSCCCSC----C------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHH----cCCCEEEEEecccccccCcc----ccc-cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhC
Confidence            999998865    58999999999999975321    111 111122566788888999999999999999999999987


Q ss_pred             CC--CCcEEecC-CCCCCHHHHHHHHHHHcCCCcceEEccCC--------CCCCCc---------------ccCC-----
Q 019060          261 EN--TGPINIGN-PGEFTMLELAENVKELINPNVEITMVENT--------PDDPRQ---------------RKPD-----  309 (346)
Q Consensus       261 ~~--~~~~~~~~-~~~~s~~ei~~~i~~~~g~~~~~~~~~~~--------~~~~~~---------------~~~~-----  309 (346)
                      +.  ++.|++.+ ++.+|+.|+++.+.+.+|.+.++...+..        ...+..               ..++     
T Consensus       212 ~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~  291 (346)
T 3i6i_A          212 VRTLNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPE  291 (346)
T ss_dssp             GGGTTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTT
T ss_pred             ccccCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCC
Confidence            65  67899985 48999999999999999998877654421        000000               0011     


Q ss_pred             hHHHHhhc-CCcccccHHhHHHHHHHHHHHhhcCCC
Q 019060          310 ITKATELL-GWEPKIKLRDGLPLMEDDFRLRLAVPR  344 (346)
Q Consensus       310 ~~k~~~~l-g~~p~~~~~e~i~~~~~~~~~~~~~~~  344 (346)
                      ..++++.+ ++++. +++|+++++++|+.++...++
T Consensus       292 ~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~~~~~  326 (346)
T 3i6i_A          292 DVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQPTAD  326 (346)
T ss_dssp             EEEHHHHSTTCCCC-CHHHHHHHHHCC---------
T ss_pred             cccHHHhCCCCCcC-cHHHHHHHHHHHhhccccccc
Confidence            12233333 56665 999999999999987765443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.97  E-value=2.9e-30  Score=223.32  Aligned_cols=205  Identities=20%  Similarity=0.219  Sum_probs=169.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~~a~  106 (346)
                      +|+||||||+|+||++++++|+++| ++|++++|+.....        ..++.++.+|+.+.+..     ++|+|||+||
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G-~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag   73 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMA-EILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG   73 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGE-EEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence            4689999999999999999999999 99999999653322        35789999999987533     7999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCC-CCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      ..    ....+...+++|+.++.++++++++.++ |||++||..+|+. ....+.+|+     .+..+...|+.+|...|
T Consensus        74 ~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~-----~~~~~~~~Y~~sK~~~e  144 (267)
T 3rft_A           74 IS----VEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPD-----VPARPDGLYGVSKCFGE  144 (267)
T ss_dssp             CC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             Cc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCC-----CCCCCCChHHHHHHHHH
Confidence            73    3456788999999999999999999887 9999999999974 334556666     57777889999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--  262 (346)
                      .+++.++.+.+++++++||+.+||+.                         .++....+|++++|+++++..+++.+.  
T Consensus       145 ~~~~~~a~~~g~~~~~vr~~~v~~~~-------------------------~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  199 (267)
T 3rft_A          145 NLARMYFDKFGQETALVRIGSCTPEP-------------------------NNYRMLSTWFSHDDFVSLIEAVFRAPVLG  199 (267)
T ss_dssp             HHHHHHHHHHCCCEEEEEECBCSSSC-------------------------CSTTHHHHBCCHHHHHHHHHHHHHCSCCC
T ss_pred             HHHHHHHHHhCCeEEEEEeecccCCC-------------------------CCCCceeeEEcHHHHHHHHHHHHhCCCCC
Confidence            99999998889999999999999863                         123345678999999999999998876  


Q ss_pred             CCcEEecCCCCCCHHHH
Q 019060          263 TGPINIGNPGEFTMLEL  279 (346)
Q Consensus       263 ~~~~~~~~~~~~s~~ei  279 (346)
                      ..++++.++++.++.++
T Consensus       200 ~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          200 CPVVWGASANDAGWWDN  216 (267)
T ss_dssp             SCEEEECCCCTTCCBCC
T ss_pred             ceEEEEeCCCCCCcccC
Confidence            34788888776655444

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.97  E-value=2.4e-30  Score=219.83  Aligned_cols=211  Identities=16%  Similarity=0.211  Sum_probs=163.4

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCe-eEEecccCCc---ccCCCCEEEEc
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRF-ELIRHDVTEP---LLIEVDQIYHL  104 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~d~~~~---~~~~~d~vi~~  104 (346)
                      ..++|+||||||||+||++++++|+++| ++|++++|+...    ..... ..++ .++.+|+++.   ...++|+|||+
T Consensus        18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~----~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~   91 (236)
T 3e8x_A           18 YFQGMRVLVVGANGKVARYLLSELKNKG-HEPVAMVRNEEQ----GPELR-ERGASDIVVANLEEDFSHAFASIDAVVFA   91 (236)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSGGG----HHHHH-HTTCSEEEECCTTSCCGGGGTTCSEEEEC
T ss_pred             CcCCCeEEEECCCChHHHHHHHHHHhCC-CeEEEEECChHH----HHHHH-hCCCceEEEcccHHHHHHHHcCCCEEEEC
Confidence            3457999999999999999999999999 999999996432    22211 2367 8999999821   23379999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      ||...    ..++...+++|+.++.+++++|++.++ |||++||...+..       +.     .+ .+...|+.+|.++
T Consensus        92 ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~-----~~-~~~~~Y~~sK~~~  154 (236)
T 3e8x_A           92 AGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQ-----GP-MNMRHYLVAKRLA  154 (236)
T ss_dssp             CCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GG-----SC-GGGHHHHHHHHHH
T ss_pred             CCCCC----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CC-----Ch-hhhhhHHHHHHHH
Confidence            98654    356788999999999999999999887 8999999554321       11     11 4457899999999


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-  262 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-  262 (346)
                      |.+++    ..+++++++||+.+||+...                 ..+.........+++++++|+|++++.+++++. 
T Consensus       155 e~~~~----~~gi~~~~lrpg~v~~~~~~-----------------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~  213 (236)
T 3e8x_A          155 DDELK----RSSLDYTIVRPGPLSNEEST-----------------GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHT  213 (236)
T ss_dssp             HHHHH----HSSSEEEEEEECSEECSCCC-----------------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGG
T ss_pred             HHHHH----HCCCCEEEEeCCcccCCCCC-----------------CeEEeccCCCcccCcEeHHHHHHHHHHHhcCccc
Confidence            99875    56899999999999998531                 112233344556899999999999999998874 


Q ss_pred             -CCcEEecCCCCCCHHHHHHHHH
Q 019060          263 -TGPINIGNPGEFTMLELAENVK  284 (346)
Q Consensus       263 -~~~~~~~~~~~~s~~ei~~~i~  284 (346)
                       ++.|++.++ .+++.|+++.++
T Consensus       214 ~g~~~~v~~~-~~~~~e~~~~i~  235 (236)
T 3e8x_A          214 IGKTFEVLNG-DTPIAKVVEQLG  235 (236)
T ss_dssp             TTEEEEEEEC-SEEHHHHHHTC-
T ss_pred             cCCeEEEeCC-CcCHHHHHHHhc
Confidence             668999887 599999998765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.97  E-value=6.6e-30  Score=223.74  Aligned_cols=251  Identities=15%  Similarity=0.184  Sum_probs=180.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~  106 (346)
                      |+||||||||+||++++++|++. | ++|++++|+.....    . +...+++++.+|+.|.+.     .++|+|||+|+
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g-~~V~~~~R~~~~~~----~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~   74 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHI-DHFHIGVRNVEKVP----D-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS   74 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTC-TTEEEEESSGGGSC----G-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCC-CcEEEEECCHHHHH----H-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            68999999999999999999998 7 99999999653221    1 123579999999998743     37999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      .....          ..|+.++.+++++|++.++ ||||+||....         +        ..+ ..+...+..+|.
T Consensus        75 ~~~~~----------~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~---------~--------~~~-~~~~~~~~~~e~  126 (289)
T 3e48_A           75 IIHPS----------FKRIPEVENLVYAAKQSGVAHIIFIGYYADQ---------H--------NNP-FHMSPYFGYASR  126 (289)
T ss_dssp             CCCSH----------HHHHHHHHHHHHHHHHTTCCEEEEEEESCCS---------T--------TCC-STTHHHHHHHHH
T ss_pred             CCccc----------hhhHHHHHHHHHHHHHcCCCEEEEEcccCCC---------C--------CCC-CccchhHHHHHH
Confidence            65321          3478899999999999997 89999994321         0        011 112233334555


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      .+    +..+++++++||+.+||+.         ..++.....+... ....++..+++++++|+|++++.++..+.  +
T Consensus       127 ~~----~~~g~~~~ilrp~~~~~~~---------~~~~~~~~~~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g  192 (289)
T 3e48_A          127 LL----STSGIDYTYVRMAMYMDPL---------KPYLPELMNMHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDTWG  192 (289)
T ss_dssp             HH----HHHCCEEEEEEECEESTTH---------HHHHHHHHHHTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGGTT
T ss_pred             HH----HHcCCCEEEEecccccccc---------HHHHHHHHHCCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCcCC
Confidence            44    3568999999999999973         1223333333322 33556788999999999999999998776  6


Q ss_pred             CcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC--------CCCC-------------CcccCChHHHHhhcCCccc
Q 019060          264 GPINIGNPGEFTMLELAENVKELINPNVEITMVENT--------PDDP-------------RQRKPDITKATELLGWEPK  322 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~--------~~~~-------------~~~~~~~~k~~~~lg~~p~  322 (346)
                      ++|+++ ++.+|+.|+++.+.+.+|++..+..++..        +...             .......+.+++.+|++|+
T Consensus       193 ~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~  271 (289)
T 3e48_A          193 KRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ  271 (289)
T ss_dssp             CEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC
T ss_pred             ceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC
Confidence            699999 99999999999999999988665543310        0110             0122355667888999888


Q ss_pred             ccHHhHHHHHH
Q 019060          323 IKLRDGLPLME  333 (346)
Q Consensus       323 ~~~~e~i~~~~  333 (346)
                       +++|.+++..
T Consensus       272 -~~~~~~~~~~  281 (289)
T 3e48_A          272 -TLQSFLQENI  281 (289)
T ss_dssp             -CHHHHHHC--
T ss_pred             -CHHHHHHHHH
Confidence             8887766543

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.96  E-value=6.6e-29  Score=208.66  Aligned_cols=212  Identities=14%  Similarity=0.177  Sum_probs=139.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc---cCCCCEEEEcccCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL---LIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~d~vi~~a~~~~  109 (346)
                      |+||||||||+||++|+++|+++| ++|++++|+..    ....+.  +++.++.+|+.+.+   ..++|+|||+||...
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~----~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~   73 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRG-HEVTAIVRNAG----KITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGISP   73 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCSH----HHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCSST
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCC-CEEEEEEcCch----hhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcCCc
Confidence            789999999999999999999999 99999999542    222222  57899999999874   347999999998743


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCC-CCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGD-PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLM  187 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~-~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~  187 (346)
                      .         ....|+.++.+++++|++.++ |+|++||..++.. +...+..|+     .+..|...|+.+|...|.+ 
T Consensus        74 ~---------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~-----~~~~~~~~y~~~k~~~e~~-  138 (221)
T 3ew7_A           74 D---------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLES-----KGLREAPYYPTARAQAKQL-  138 (221)
T ss_dssp             T---------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC------------------------CCCSCCHHHHHHHH-
T ss_pred             c---------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCcccccc-----CCCCCHHHHHHHHHHHHHH-
Confidence            1         124589999999999999876 9999999876543 333334444     4556667899999999986 


Q ss_pred             HHHHH-HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--CC
Q 019060          188 FDYHR-QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (346)
Q Consensus       188 ~~~~~-~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~  264 (346)
                      ..+.+ ..+++++++||+.+||++...  ..    +   ...+..+...+++   .++++++|+|++++.+++++.  ++
T Consensus       139 ~~~~~~~~gi~~~ivrp~~v~g~~~~~--~~----~---~~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~~g~  206 (221)
T 3ew7_A          139 EHLKSHQAEFSWTYISPSAMFEPGERT--GD----Y---QIGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNHLNE  206 (221)
T ss_dssp             HHHHTTTTTSCEEEEECSSCCCCC---------------------------------CCCHHHHHHHHHHHHHSCSCTTS
T ss_pred             HHHHhhccCccEEEEeCcceecCCCcc--Cc----e---EeccccceecCCC---CceEeHHHHHHHHHHHHhCccccCC
Confidence            33333 568999999999999984211  11    1   1122333333322   369999999999999999876  67


Q ss_pred             cEEecCCCCCCHHH
Q 019060          265 PINIGNPGEFTMLE  278 (346)
Q Consensus       265 ~~~~~~~~~~s~~e  278 (346)
                      .|+++++...+..|
T Consensus       207 ~~~~~~~~~~~~~~  220 (221)
T 3ew7_A          207 HFTVAGKLEHHHHH  220 (221)
T ss_dssp             EEECCC--------
T ss_pred             EEEECCCCcccccc
Confidence            99999988777654

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.96  E-value=1.9e-29  Score=211.73  Aligned_cols=201  Identities=15%  Similarity=0.204  Sum_probs=158.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-cc-----cCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PL-----LIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~-----~~~~d~vi~~a~  106 (346)
                      |+||||||||+||++++++|+++| ++|++++|+......       ..++.++.+|+.+ .+     ..++|+|||+||
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag   72 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKVEQVPQ-------YNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG   72 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSGGGSCC-------CTTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCccchhh-------cCCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence            699999999999999999999999 999999996432211       1579999999999 53     337999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      .....        .+++|+.++.+++++|++.++ +||++||.++++..   +..|      ++..|...|+.+|.++|.
T Consensus        73 ~~~~~--------~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e------~~~~~~~~Y~~sK~~~e~  135 (219)
T 3dqp_A           73 SGGKS--------LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG------AGFDALKDYYIAKHFADL  135 (219)
T ss_dssp             CTTSS--------CCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS------HHHHHTHHHHHHHHHHHH
T ss_pred             CCCCC--------cEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc------cccccccHHHHHHHHHHH
Confidence            75421        346688899999999999987 89999998776521   2222      133456789999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--T  263 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~  263 (346)
                      +++   +..+++++++||+.+||+....                 .+..   ++..+++++++|+|++++.+++++.  +
T Consensus       136 ~~~---~~~~i~~~ilrp~~v~g~~~~~-----------------~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~g  192 (219)
T 3dqp_A          136 YLT---KETNLDYTIIQPGALTEEEATG-----------------LIDI---NDEVSASNTIGDVADTIKELVMTDHSIG  192 (219)
T ss_dssp             HHH---HSCCCEEEEEEECSEECSCCCS-----------------EEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGTT
T ss_pred             HHH---hccCCcEEEEeCceEecCCCCC-----------------cccc---CCCcCCcccHHHHHHHHHHHHhCccccC
Confidence            986   4568999999999999985321                 1111   2566899999999999999998765  5


Q ss_pred             CcEEecCCCCCCHHHHHHH
Q 019060          264 GPINIGNPGEFTMLELAEN  282 (346)
Q Consensus       264 ~~~~~~~~~~~s~~ei~~~  282 (346)
                      ++|++.++. .++.|+.+.
T Consensus       193 ~~~~i~~g~-~~~~e~~~~  210 (219)
T 3dqp_A          193 KVISMHNGK-TAIKEALES  210 (219)
T ss_dssp             EEEEEEECS-EEHHHHHHT
T ss_pred             cEEEeCCCC-ccHHHHHHH
Confidence            689998764 899988764

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.96  E-value=6.9e-29  Score=218.31  Aligned_cols=264  Identities=17%  Similarity=0.149  Sum_probs=185.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      ++|+||||||||+||++++++|+++|.++|++++|+......   ..+...+++++.+|+.|.+.     .++|+|||++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~---~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   80 (299)
T 2wm3_A            4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA---KELRLQGAEVVQGDQDDQVIMELALNGAYATFIVT   80 (299)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH---HHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH---HHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence            358999999999999999999999875899999996532211   11112478899999998754     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +....    .    ..+.|+.++.+++++|++.++ +||++||..+++..      +.        .+...|+.+|..+|
T Consensus        81 ~~~~~----~----~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~------~~--------~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           81 NYWES----C----SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLT------AG--------RLAAAHFDGKGEVE  138 (299)
T ss_dssp             CHHHH----T----CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHT------TT--------SCCCHHHHHHHHHH
T ss_pred             CCCcc----c----cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccC------CC--------cccCchhhHHHHHH
Confidence            64211    0    125678899999999999988 89998887777521      11        12356999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHH-HHcCCCeEE-ecCCcceeecccHHHHHHHHHHHHhCC-
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ-AIRGEPLTV-QAPGTQTRSFCYVSDMVDGLIRLMEGE-  261 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~~~~~-  261 (346)
                      .+++.    .+++++++||+.+||+...        .++.. ...++...+ ...++..+++++++|+|++++.++..+ 
T Consensus       139 ~~~~~----~gi~~~ilrp~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (299)
T 2wm3_A          139 EYFRD----IGVPMTSVRLPCYFENLLS--------HFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE  206 (299)
T ss_dssp             HHHHH----HTCCEEEEECCEEGGGGGT--------TTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH
T ss_pred             HHHHH----CCCCEEEEeecHHhhhchh--------hcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh
Confidence            98864    4899999999999997421        01110 112322121 223667889999999999999999864 


Q ss_pred             --CCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC----CCCC------------cccCChHHHHhhcCCcccc
Q 019060          262 --NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP----DDPR------------QRKPDITKATELLGWEPKI  323 (346)
Q Consensus       262 --~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~----~~~~------------~~~~~~~k~~~~lg~~p~~  323 (346)
                        .++.|++++ +.+|+.|+++.+.+.+|++..+...+...    ..+.            .-........+.+|..|+ 
T Consensus       207 ~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-  284 (299)
T 2wm3_A          207 KYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKAL-  284 (299)
T ss_dssp             HHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCC-
T ss_pred             hhCCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCC-
Confidence              256899886 68999999999999999886654433210    0000            000112234566787766 


Q ss_pred             cHHhHHHHHH
Q 019060          324 KLRDGLPLME  333 (346)
Q Consensus       324 ~~~e~i~~~~  333 (346)
                      +++|.+++..
T Consensus       285 ~~~~~~~~~~  294 (299)
T 2wm3_A          285 TLDQWLEQHK  294 (299)
T ss_dssp             CHHHHHHHHG
T ss_pred             CHHHHHHhCh
Confidence            8888877653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.96  E-value=4.6e-29  Score=208.75  Aligned_cols=202  Identities=20%  Similarity=0.195  Sum_probs=157.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCC---CCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE---VDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~d~vi~~a  105 (346)
                      |+|+||||||||+||++++++|+++| +  +|++++|+...         ..+++.++.+|+.+.+...   +|+|||+|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g-~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a   73 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEP-TLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGSIDTAFCCL   73 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCT-TCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSCCSEEEECC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCC-CCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhhhcEEEECe
Confidence            56899999999999999999999999 6  99999986533         1246888899988764332   89999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +...  ....++...+++|+.++.++++++++.++ +||++||..+|+.                  +...|+.+|..+|
T Consensus        74 ~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~------------------~~~~y~~sK~~~e  133 (215)
T 2a35_A           74 GTTI--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELE  133 (215)
T ss_dssp             CCCH--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHH
T ss_pred             eecc--ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC------------------CccHHHHHHHHHH
Confidence            8653  23457788899999999999999999887 8999999988752                  2357999999999


Q ss_pred             HHHHHHHHHhCCc-eEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCC
Q 019060          185 TLMFDYHRQHGIE-IRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT  263 (346)
Q Consensus       185 ~~~~~~~~~~~~~-~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~  263 (346)
                      .+++.    .+++ ++++||+.+|||...   ..++..+    . +....+ .+  ..+++++++|+|++++.+++++..
T Consensus       134 ~~~~~----~~~~~~~~vrp~~v~g~~~~---~~~~~~~----~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~~  198 (215)
T 2a35_A          134 QALQE----QGWPQLTIARPSLLFGPREE---FRLAEIL----A-APIARI-LP--GKYHGIEACDLARALWRLALEEGK  198 (215)
T ss_dssp             HHHTT----SCCSEEEEEECCSEESTTSC---EEGGGGT----T-CCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred             HHHHH----cCCCeEEEEeCceeeCCCCc---chHHHHH----H-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCCC
Confidence            98865    4898 999999999999743   1222111    1 222222 22  257999999999999999998888


Q ss_pred             CcEEecCCCCCCHH
Q 019060          264 GPINIGNPGEFTML  277 (346)
Q Consensus       264 ~~~~~~~~~~~s~~  277 (346)
                      +.||+++++.+++.
T Consensus       199 ~~~~i~~~~~~~~~  212 (215)
T 2a35_A          199 GVRFVESDELRKLG  212 (215)
T ss_dssp             EEEEEEHHHHHHHH
T ss_pred             CceEEcHHHHHHhh
Confidence            89999987765543

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.96  E-value=4.7e-28  Score=203.92  Aligned_cols=213  Identities=14%  Similarity=0.050  Sum_probs=153.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc---cCCCCEEEEcccCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL---LIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~d~vi~~a~~~~  109 (346)
                      |+||||||||+||++|+++|+++| ++|++++|+.    ...... ...+++++.+|+.+.+   ..++|+|||+||...
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~----~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~   74 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRG-HEVLAVVRDP----QKAADR-LGATVATLVKEPLVLTEADLDSVDAVVDALSVPW   74 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHH-TCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCT
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCC-CEEEEEEecc----cccccc-cCCCceEEecccccccHhhcccCCEEEECCccCC
Confidence            789999999999999999999999 9999999953    222222 2357899999999874   347999999998752


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCC-C--CCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLV-H--PQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~-~--~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ..   .    ....|+.++.+++++|++.+.|||++||..++..... .  +.+|.     ..+.|...|+.+|..+|.+
T Consensus        75 ~~---~----~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~-----~~~~~~~~y~~sK~~~e~~  142 (224)
T 3h2s_A           75 GS---G----RGYLHLDFATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFP-----ESAASQPWYDGALYQYYEY  142 (224)
T ss_dssp             TS---S----CTHHHHHHHHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCC-----GGGGGSTTHHHHHHHHHHH
T ss_pred             Cc---c----hhhHHHHHHHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCC-----CCCccchhhHHHHHHHHHH
Confidence            11   1    1367999999999999998889999999865543222 1  22222     2333467899999999954


Q ss_pred             HHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--CC
Q 019060          187 MFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--TG  264 (346)
Q Consensus       187 ~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~  264 (346)
                       ..+.+..+++++++||+.+||++....   +.       .....+..   +....++++++|+|++++.+++++.  ++
T Consensus       143 -~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-------~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g~  208 (224)
T 3h2s_A          143 -QFLQMNANVNWIGISPSEAFPSGPATS---YV-------AGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIRD  208 (224)
T ss_dssp             -HHHTTCTTSCEEEEEECSBCCCCCCCC---EE-------EESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTTS
T ss_pred             -HHHHhcCCCcEEEEcCccccCCCcccC---ce-------eccccccc---CCCCCceEeHHHHHHHHHHHhcCccccCC
Confidence             455556789999999999999853211   00       11111211   2344689999999999999999876  67


Q ss_pred             cEEecCCCCCCHH
Q 019060          265 PINIGNPGEFTML  277 (346)
Q Consensus       265 ~~~~~~~~~~s~~  277 (346)
                      .|++.+.+..++.
T Consensus       209 ~~~~~~~~~~~~~  221 (224)
T 3h2s_A          209 RIVVRDADLEHHH  221 (224)
T ss_dssp             EEEEEECC-----
T ss_pred             EEEEecCcchhcc
Confidence            8999987665543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.95  E-value=4.2e-28  Score=207.93  Aligned_cols=222  Identities=16%  Similarity=0.133  Sum_probs=163.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      ++|+||||||+|+||++++++|+++  | ++|++++|+.    ......  ..++.++.+|+.+.+.     .++|+|||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g-~~V~~~~r~~----~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDK-FVAKGLVRSA----QGKEKI--GGEADVFIGDITDADSINPAFQGIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTT-CEEEEEESCH----HHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCC-cEEEEEEcCC----Cchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence            4689999999999999999999999  7 9999999853    222222  2467889999998643     36999999


Q ss_pred             cccCCCccc-------------cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060          104 LACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus       104 ~a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|+......             ........+++|+.++.++++++++.++ +||++||..++..        .     .+
T Consensus        76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~-----~~  142 (253)
T 1xq6_A           76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------D-----HP  142 (253)
T ss_dssp             CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------T-----CG
T ss_pred             eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------C-----Cc
Confidence            998654211             1122235678999999999999999887 8999999887521        1     11


Q ss_pred             CC--CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          170 IG--VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       170 ~~--~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      ..  ....|+.+|..+|.+++.    .+++++++||+.+||+.....  .+        ..+....+..   ...+++++
T Consensus       143 ~~~~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~--~~--------~~~~~~~~~~---~~~~~~~~  205 (253)
T 1xq6_A          143 LNKLGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVR--EL--------LVGKDDELLQ---TDTKTVPR  205 (253)
T ss_dssp             GGGGGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSS--CE--------EEESTTGGGG---SSCCEEEH
T ss_pred             cccccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchh--hh--------hccCCcCCcC---CCCcEEcH
Confidence            11  113588899999998753    589999999999999863211  00        0011111111   12468999


Q ss_pred             HHHHHHHHHHHhCCC--CCcEEecCCC---CCCHHHHHHHHHHHcCC
Q 019060          248 SDMVDGLIRLMEGEN--TGPINIGNPG---EFTMLELAENVKELINP  289 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~--~~~~~~~~~~---~~s~~ei~~~i~~~~g~  289 (346)
                      +|+|++++.+++++.  +++||+.+++   ++|+.|+++.+.+.+|+
T Consensus       206 ~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          206 ADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             HHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            999999999998764  5689999864   69999999999998875

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.95  E-value=3.2e-27  Score=211.98  Aligned_cols=227  Identities=14%  Similarity=0.133  Sum_probs=168.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecc-cCCccc-----CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD-VTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~-----~~~d~vi~~a  105 (346)
                      .|+|||||||||||++|+++|+++| ++|++++|+.....  ...+....++.++.+| +++.+.     .++|+|||++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~--~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a   81 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLI--AEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   81 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHH--HHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCChhh--HHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcC
Confidence            5899999999999999999999999 99999999653321  1122223478899999 988653     3799999998


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeccc--ccCCCCCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSE--VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~--v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      +...     .      ..|..+ .+++++|++.+ + ||||+||..  .|+.                 .+...|+.+|.
T Consensus        82 ~~~~-----~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------------~~~~~y~~sK~  132 (352)
T 1xgk_A           82 TSQA-----G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------------WPAVPMWAPKF  132 (352)
T ss_dssp             CSTT-----S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------------CCCCTTTHHHH
T ss_pred             CCCC-----c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------------CCCccHHHHHH
Confidence            6431     1      235665 99999999998 7 999999986  3321                 12256999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHH-HcCCCe--EEecCCcceeecccH-HHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IRGEPL--TVQAPGTQTRSFCYV-SDMVDGLIRL  257 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~v~v-~Dva~~i~~~  257 (346)
                      .+|.+++.    .+++++++||+ +||+........    ++... ...+.+  .++++++..++++|+ +|+|++++.+
T Consensus       133 ~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~  203 (352)
T 1xgk_A          133 TVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYP----LFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  203 (352)
T ss_dssp             HHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCS----SCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHH----cCCCEEEEecc-eecCCchhcccc----cccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHH
Confidence            99999865    38999999976 688754311110    11000 122222  335567788999999 8999999999


Q ss_pred             HhCC----CCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCC
Q 019060          258 MEGE----NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTP  300 (346)
Q Consensus       258 ~~~~----~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~  300 (346)
                      ++++    .++.||+++ +.+|+.|+++.+.+.+|.+..+..++...
T Consensus       204 l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp~~~  249 (352)
T 1xgk_A          204 FKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPKVE  249 (352)
T ss_dssp             HHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSSCC
T ss_pred             HhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECCHHH
Confidence            9875    367999995 77999999999999999988777666443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=4e-27  Score=208.86  Aligned_cols=224  Identities=17%  Similarity=0.195  Sum_probs=166.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      |+++||||||||+||++++++|+++| ++|++++|+.......+.. +...+++++.+|+.|.+.     .++|+|||++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a   87 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLG-HPTYVFTRPNSSKTTLLDE-FQSLGAIIVKGELDEHEKLVELMKKVDVVISAL   87 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECTTCSCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCC-CcEEEEECCCCchhhHHHH-hhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            45689999999999999999999999 9999999975422222211 122578999999998754     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHHhHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGKRV  182 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK~~  182 (346)
                      +...               +.++.+++++|++.+ + |||+ |   +||...    +|.     .+..| ...| .+|..
T Consensus        88 ~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~sK~~  138 (318)
T 2r6j_A           88 AFPQ---------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRI-----NALPPFEALI-ERKRM  138 (318)
T ss_dssp             CGGG---------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTC-----CCCHHHHHHH-HHHHH
T ss_pred             chhh---------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccc-----cCCCCcchhH-HHHHH
Confidence            7431               446789999999998 7 6763 3   344221    121     22223 2458 99999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      +|.+++.    .+++++++||+.+++.        +++.++.....++.+.++++++..+++++++|+|++++.++..+.
T Consensus       139 ~e~~~~~----~~~~~~~lr~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (318)
T 2r6j_A          139 IRRAIEE----ANIPYTYVSANCFASY--------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR  206 (318)
T ss_dssp             HHHHHHH----TTCCBEEEECCEEHHH--------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHh----cCCCeEEEEcceehhh--------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc
Confidence            9998753    5899999999887753        333333332345566777778889999999999999999998764


Q ss_pred             --CCcEEecC-CCCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          263 --TGPINIGN-PGEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       263 --~~~~~~~~-~~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                        ++.+++.+ ++.+|+.|+++.+.+.+|.+..+..++
T Consensus       207 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  244 (318)
T 2r6j_A          207 ALNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP  244 (318)
T ss_dssp             GTTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred             ccCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence              56788875 478999999999999999987766543

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.94  E-value=1.6e-27  Score=210.97  Aligned_cols=233  Identities=15%  Similarity=0.151  Sum_probs=167.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhh--hcCCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRK--WIGHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      +|+||||||||+||++++++|+++| ++|++++|+.... .+....  .+...+++++.+|+.+.+.     .++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~   82 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   82 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence            5789999999999999999999999 9999999975332 111111  1223578999999998754     37999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHHhH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEGK  180 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~sK  180 (346)
                      +++.....           .|+.++.+++++|++.+ + |||+ |   +||......   +     .+..| ...| .+|
T Consensus        83 ~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~-----~~~~p~~~~y-~sK  138 (313)
T 1qyd_A           83 ALAGGVLS-----------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---E-----HALQPGSITF-IDK  138 (313)
T ss_dssp             CCCCSSSS-----------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---C-----CCCSSTTHHH-HHH
T ss_pred             CCccccch-----------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---c-----cCCCCCcchH-HHH
Confidence            99865321           25778899999999998 7 7774 3   454322111   1     22233 3468 999


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ..+|++++    ..+++++++||+.++|+........ ..   .....++.+.++++++..+++++++|+|++++.++.+
T Consensus       139 ~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  210 (313)
T 1qyd_A          139 RKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQL-DG---HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD  210 (313)
T ss_dssp             HHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCT-TC---CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHH----hcCCCeEEEEeceeccccccccccc-cc---cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence            99999875    3589999999999887532100000 00   0012334455667778889999999999999999987


Q ss_pred             CC--CCcEEecCC-CCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          261 EN--TGPINIGNP-GEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       261 ~~--~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                      +.  ++.|++.++ +.+|+.|+++.+.+.+|++..+..++
T Consensus       211 ~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  250 (313)
T 1qyd_A          211 PQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  250 (313)
T ss_dssp             GGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             cccCCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence            64  567888865 78999999999999999887665443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=1.3e-26  Score=205.83  Aligned_cols=225  Identities=14%  Similarity=0.170  Sum_probs=165.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC-CCC-cchhhh--hcCCCCeeEEecccCCcccC-----CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGS-KDNLRK--WIGHPRFELIRHDVTEPLLI-----EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~-~~~~~~--~~~~~~~~~~~~d~~~~~~~-----~~d~v  101 (346)
                      ++|+||||||||+||++++++|+++| ++|++++|+. ... ......  .+...+++++.+|+.|.+.+     ++|+|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v   81 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV   81 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence            35789999999999999999999999 9999999974 211 111111  11235789999999987543     79999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDE  178 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~  178 (346)
                      ||+++...               +.++.+++++|++.+ + ||| .|   +||...    +|.     .+..| ...| .
T Consensus        82 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v-~S---~~g~~~----~~~-----~~~~p~~~~y-~  132 (321)
T 3c1o_A           82 ISALPFPM---------------ISSQIHIINAIKAAGNIKRFL-PS---DFGCEE----DRI-----KPLPPFESVL-E  132 (321)
T ss_dssp             EECCCGGG---------------SGGGHHHHHHHHHHCCCCEEE-CS---CCSSCG----GGC-----CCCHHHHHHH-H
T ss_pred             EECCCccc---------------hhhHHHHHHHHHHhCCccEEe-cc---ccccCc----ccc-----ccCCCcchHH-H
Confidence            99997431               456789999999998 7 776 23   344211    121     22223 3568 9


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHH---HHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIA---QAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      +|..+|.+++.    .+++++++||+.++++.        +..+..   ....++.+.++++++..+++++++|+|++++
T Consensus       133 sK~~~e~~~~~----~~~~~~~lrp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          133 KKRIIRRAIEA----AALPYTYVSANCFGAYF--------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HHHHHHHHHHH----HTCCBEEEECCEEHHHH--------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHH
T ss_pred             HHHHHHHHHHH----cCCCeEEEEeceecccc--------ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHH
Confidence            99999998853    48999999999888642        222221   1123456677778888899999999999999


Q ss_pred             HHHhCCC--CCcEEecC-CCCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          256 RLMEGEN--TGPINIGN-PGEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       256 ~~~~~~~--~~~~~~~~-~~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                      .++..+.  ++.|++.+ ++.+|+.|+++.+.+.+|.+..+..++
T Consensus       201 ~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~  245 (321)
T 3c1o_A          201 KVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP  245 (321)
T ss_dssp             HHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred             HHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence            9998765  45788876 489999999999999999987766544

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.93  E-value=4.2e-26  Score=201.21  Aligned_cols=227  Identities=17%  Similarity=0.198  Sum_probs=163.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC-CCCc--chhh--hhcCCCCeeEEecccCCccc-----CCCCEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSK--DNLR--KWIGHPRFELIRHDVTEPLL-----IEVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~--~~~~--~~~~~~~~~~~~~d~~~~~~-----~~~d~v  101 (346)
                      +|+||||||||+||++++++|+++| ++|++++|+. ....  +...  ..+...+++++.+|+.+.+.     .++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v   80 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV   80 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence            5789999999999999999999999 9999999975 1111  1111  11123578999999998753     379999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDE  178 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~  178 (346)
                      ||+++...               +.++.+++++|++.+ + |||+ |   +||...    +|.     .+..| ...| .
T Consensus        81 i~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~-----~~~~p~~~~y-~  131 (307)
T 2gas_A           81 ICAAGRLL---------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRH-----DAVEPVRQVF-E  131 (307)
T ss_dssp             EECSSSSC---------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSC-----CCCTTHHHHH-H
T ss_pred             EECCcccc---------------cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccc-----cCCCcchhHH-H
Confidence            99997542               446788999999998 7 7763 3   344221    121     22233 3568 9


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      +|..+|.+++.    .+++++++||+.++++....    +. ........++.+.++++++..+++++++|+|++++.++
T Consensus       132 sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l  202 (307)
T 2gas_A          132 EKASIRRVIEA----EGVPYTYLCCHAFTGYFLRN----LA-QLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAA  202 (307)
T ss_dssp             HHHHHHHHHHH----HTCCBEEEECCEETTTTGGG----TT-CTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----cCCCeEEEEcceeecccccc----cc-ccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHH
Confidence            99999998753    48999999999998864211    00 00000113445666677788899999999999999999


Q ss_pred             hCCC--CCcEEecCC-CCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          259 EGEN--TGPINIGNP-GEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       259 ~~~~--~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                      ..+.  ++.+++.++ +.+|+.|+++.+.+.+|.+.++...+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~  244 (307)
T 2gas_A          203 NDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS  244 (307)
T ss_dssp             TCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred             cCccccCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence            8765  557888764 68999999999999999987766543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.93  E-value=1.3e-26  Score=204.67  Aligned_cols=227  Identities=16%  Similarity=0.231  Sum_probs=165.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--cchhh--hhcCCCCeeEEecccCCcccC-----CCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--KDNLR--KWIGHPRFELIRHDVTEPLLI-----EVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--~~~~~--~~~~~~~~~~~~~d~~~~~~~-----~~d~vi  102 (346)
                      +|+||||||||+||++++++|+++| ++|++++|+....  .+...  ..+...+++++.+|+.|.+.+     ++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence            5789999999999999999999999 9999999975332  11111  112245789999999987543     799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC-CCchHHh
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV-RSCYDEG  179 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~-~~~Y~~s  179 (346)
                      |+++...               +.++.+++++|++.+ + |||+ |+   ||...    +|.     .+..| ...| .+
T Consensus        83 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~----~~~-----~~~~p~~~~y-~s  133 (308)
T 1qyc_A           83 STVGSLQ---------------IESQVNIIKAIKEVGTVKRFFP-SE---FGNDV----DNV-----HAVEPAKSVF-EV  133 (308)
T ss_dssp             ECCCGGG---------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSCT----TSC-----CCCTTHHHHH-HH
T ss_pred             ECCcchh---------------hhhHHHHHHHHHhcCCCceEee-cc---cccCc----ccc-----ccCCcchhHH-HH
Confidence            9997431               446788999999998 7 6763 43   44211    121     23333 3468 99


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      |..+|.+++.    .+++++++||+.++|+.......     .......++.+.++++++..+++++++|+|++++.++.
T Consensus       134 K~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (308)
T 1qyc_A          134 KAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQ-----AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD  204 (308)
T ss_dssp             HHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTC-----TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHh----cCCCeEEEEeceecccccccccc-----ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence            9999998754    48999999999988753211000     00001234456677788889999999999999999998


Q ss_pred             CCC--CCcEEecCC-CCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          260 GEN--TGPINIGNP-GEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       260 ~~~--~~~~~~~~~-~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                      .+.  ++.|++.++ +.+|+.|+++.+.+.+|.+.++...+
T Consensus       205 ~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~  245 (308)
T 1qyc_A          205 DPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP  245 (308)
T ss_dssp             CGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             CccccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCC
Confidence            764  567888764 78999999999999999987766544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=1.2e-24  Score=180.40  Aligned_cols=194  Identities=12%  Similarity=0.080  Sum_probs=144.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a~  106 (346)
                      .|+||||||||+||++++++|+++| ++|++++|+.....    . ....++.++.+|+.+.+.     .++|+|||+++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~   76 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLP----S-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG   76 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSC----S-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcc----c-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence            3899999999999999999999999 99999999643221    1 113578899999998753     36999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      .....    ++   .+.|+.++.++++++++.++ +||++||..+|+.....            ..+...|+.+|..+|.
T Consensus        77 ~~~~~----~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------------~~~~~~y~~~K~~~e~  137 (206)
T 1hdo_A           77 TRNDL----SP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------PPRLQAVTDDHIRMHK  137 (206)
T ss_dssp             CTTCC----SC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------CGGGHHHHHHHHHHHH
T ss_pred             CCCCC----Cc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc------------cccchhHHHHHHHHHH
Confidence            65431    11   14789999999999999887 89999999998743211            1145679999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce-eecccHHHHHHHHHHHHhCCC--
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT-RSFCYVSDMVDGLIRLMEGEN--  262 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~Dva~~i~~~~~~~~--  262 (346)
                      +++    ..+++++++||+.++ +....  ..+             ......  .. .++++++|+|++++.+++++.  
T Consensus       138 ~~~----~~~i~~~~lrp~~~~-~~~~~--~~~-------------~~~~~~--~~~~~~i~~~Dva~~~~~~~~~~~~~  195 (206)
T 1hdo_A          138 VLR----ESGLKYVAVMPPHIG-DQPLT--GAY-------------TVTLDG--RGPSRVISKHDLGHFMLRCLTTDEYD  195 (206)
T ss_dssp             HHH----HTCSEEEEECCSEEE-CCCCC--SCC-------------EEESSS--CSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHH----hCCCCEEEEeCCccc-CCCCC--cce-------------EecccC--CCCCCccCHHHHHHHHHHHhcCcccc
Confidence            884    358999999999983 32110  110             000011  11 489999999999999998765  


Q ss_pred             CCcEEecCCC
Q 019060          263 TGPINIGNPG  272 (346)
Q Consensus       263 ~~~~~~~~~~  272 (346)
                      ++.|++.+++
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            5689998864

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.93  E-value=3.1e-26  Score=199.50  Aligned_cols=236  Identities=16%  Similarity=0.100  Sum_probs=164.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++|+||||||+|+||++++++|+++| ++|++++|+.....+.... . ..++.++.+|+++.+..            ++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAG-DTVIGTARRTEALDDLVAA-Y-PDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHH-C-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh-c-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999 9999999965332222111 1 24789999999997432            69


Q ss_pred             CEEEEcccCCCcc----ccccChHHHHHHHHHH----HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPI----FYKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||.....    ...+++...+++|+.+    +..++..+++.+. ++|++||...+.                +
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~  144 (281)
T 3m1a_A           81 DVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL----------------S  144 (281)
T ss_dssp             SEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------C
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccC----------------C
Confidence            9999999975432    2234567788999999    5555555566665 999999987653                3


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc---cHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG---RVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      ..+...|+.+|...|.+.+.++.+   .++++++++||.++++.......   .....+.........+.   .......
T Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  221 (281)
T 3m1a_A          145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QGSDGSQ  221 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC-----
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hhccCCC
Confidence            344567999999999999998887   68999999999998875332110   00011111111000010   0112236


Q ss_pred             cccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcC
Q 019060          244 FCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELIN  288 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g  288 (346)
                      +.+++|+|++++.+++.+. ++.|+++++......+....+.+.++
T Consensus       222 ~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~  267 (281)
T 3m1a_A          222 PGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT  267 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence            7889999999999998877 66788888776677777777766553

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.93  E-value=6.1e-25  Score=187.08  Aligned_cols=201  Identities=13%  Similarity=0.030  Sum_probs=149.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~  103 (346)
                      ++|+||||||+|+||++++++|+++| +  +|++++|+........     ..++.++.+|+.+.+..     ++|+|||
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G-~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQG-LFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHT-CCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCC-CCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence            46899999999999999999999999 8  9999999654322111     13678899999987543     6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      +||....   ...+...+++|+.++.++++++++.++ +||++||..+|+.                  +...|+.+|..
T Consensus        91 ~ag~~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~------------------~~~~Y~~sK~~  149 (242)
T 2bka_A           91 CLGTTRG---KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYLQVKGE  149 (242)
T ss_dssp             CCCCCHH---HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHH
T ss_pred             CCCcccc---cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC------------------CcchHHHHHHH
Confidence            9986432   123567889999999999999999887 8999999988752                  12569999999


Q ss_pred             HHHHHHHHHHHhCC-ceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          183 AETLMFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       183 ~E~~~~~~~~~~~~-~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      .|.+++.    .++ +++++||+.+||+....   .....+........+. .    .....+++++|+|++++.++.++
T Consensus       150 ~e~~~~~----~~~~~~~~vrpg~v~~~~~~~---~~~~~~~~~~~~~~~~-~----~~~~~~~~~~dva~~~~~~~~~~  217 (242)
T 2bka_A          150 VEAKVEE----LKFDRYSVFRPGVLLCDRQES---RPGEWLVRKFFGSLPD-S----WASGHSVPVVTVVRAMLNNVVRP  217 (242)
T ss_dssp             HHHHHHT----TCCSEEEEEECCEEECTTGGG---SHHHHHHHHHHCSCCT-T----GGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHh----cCCCCeEEEcCceecCCCCCC---cHHHHHHHHhhcccCc-c----ccCCcccCHHHHHHHHHHHHhCc
Confidence            9998864    367 59999999999996421   2223333333322111 1    11235899999999999999887


Q ss_pred             C-CCcEEecC
Q 019060          262 N-TGPINIGN  270 (346)
Q Consensus       262 ~-~~~~~~~~  270 (346)
                      . .+.+++.+
T Consensus       218 ~~~~~~~~~~  227 (242)
T 2bka_A          218 RDKQMELLEN  227 (242)
T ss_dssp             CCSSEEEEEH
T ss_pred             cccCeeEeeH
Confidence            6 46666544

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.93  E-value=8.7e-25  Score=190.05  Aligned_cols=233  Identities=17%  Similarity=0.155  Sum_probs=168.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+...............++.++.+|+++.+..            ++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYG-AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999885422111111121122688999999987532            69


Q ss_pred             CEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |+|||+||.....      ...+++...+++|+.++.++++++...    +. ++|++||...+...             
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  160 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------------  160 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------------
T ss_pred             CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-------------
Confidence            9999999965321      122456778899999999999887653    44 89999999887521             


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...|.+++.++.+   .+++++++|||.++++........ .............       .....+
T Consensus       161 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~  230 (278)
T 2bgk_A          161 --EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV-DSSRVEELAHQAA-------NLKGTL  230 (278)
T ss_dssp             --TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC-CHHHHHHHHHHTC-------SSCSCC
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc-chhHHHHhhhccc-------cccccc
Confidence              113357999999999999988776   489999999999999864322110 0122222221111       112358


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHc
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELI  287 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~  287 (346)
                      ++++|+|++++.++..+.    ++.+++.++..+++.|+++.+.+.+
T Consensus       231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          231 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             CCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            899999999999986532    5579999999999999999876543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.92  E-value=2.2e-24  Score=185.05  Aligned_cols=218  Identities=14%  Similarity=0.111  Sum_probs=158.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ..+|+||||||+|+||++++++|+++| ++|++++|+..........+. ...++.++.+|+.+.+..            
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            346899999999999999999999999 999999986422111111111 124688899999986432            


Q ss_pred             CCCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+||......   ..+++...+++|+.++.++++++.    +.+. +||++||...+.                
T Consensus        88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~----------------  151 (255)
T 1fmc_A           88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------  151 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcC----------------
Confidence            6999999999764322   234567788999999999888774    4454 899999988764                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...|.+++.++.+.   +++++++||+.++++.....   ..+.+......+.++         ..+.
T Consensus       152 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~---------~~~~  219 (255)
T 1fmc_A          152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV---ITPEIEQKMLQHTPI---------RRLG  219 (255)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---CCHHHHHHHHHTCSS---------CSCB
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc---cChHHHHHHHhcCCc---------ccCC
Confidence            22334679999999999999887764   78999999999998742211   112333333333222         2477


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      +++|+|++++.++..+.    ++.|++.++..+|+
T Consensus       220 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred             CHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence            99999999999987532    45899999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.92  E-value=4.2e-24  Score=182.14  Aligned_cols=212  Identities=19%  Similarity=0.148  Sum_probs=152.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+..... ...+.  ..+++++.+|+.+.+..        ++|+||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASG-AKVVAVTRTNSDLV-SLAKE--CPGIEPVCVDLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHh--ccCCCcEEecCCCHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999 99999998542211 11111  23577889999986432        489999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+||......    ..+++...+++|+.++.++++++...    +  .+||++||...+..                ..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~  145 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT----------------FPN  145 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------------CTT
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCC----------------CCC
Confidence            9999654322    22456678899999999988877543    4  38999999987742                223


Q ss_pred             CCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      ...|+.+|...|.+++.++.+   .+++++++||+.++++.......  .+.++..+..+.+         ..++++++|
T Consensus       146 ~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~d  214 (244)
T 1cyd_A          146 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--DPEFARKLKERHP---------LRKFAEVED  214 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--CHHHHHHHHHHST---------TSSCBCHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc--CHHHHHHHHhcCC---------ccCCCCHHH
Confidence            457999999999999998876   47899999999999874210000  1222233322221         247899999


Q ss_pred             HHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          250 MVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       250 va~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +|++++.++..+.    ++.+++.++..
T Consensus       215 va~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          215 VVNSILFLLSDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             HHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             HHHHHHHHhCchhhcccCCEEEECCCcc
Confidence            9999999997642    44677777643

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.92  E-value=4.1e-25  Score=189.55  Aligned_cols=220  Identities=13%  Similarity=0.036  Sum_probs=150.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc---------CCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~d~vi~  103 (346)
                      |+||||||+|+||++++++|+++| ++|++++|+......            .+.+|+.+.+.         .++|+|||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAG-HTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEEE
Confidence            589999999999999999999999 999999996432111            14567666432         26999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCC-C-------CCCCcC--CCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHP-Q-------DESYWG--NVN  168 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~~~~-~-------~e~~~~--~~~  168 (346)
                      +||....   ...+...+++|+.++.++++++...    + .++|++||..+|+.....+ .       +|+...  ...
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (255)
T 2dkn_A           69 CAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ  145 (255)
T ss_dssp             CCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred             CCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccc
Confidence            9986542   3557889999999999999977654    4 4899999999886431110 0       000000  000


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ...+...|+.+|.+.|.+++.++.+   .+++++++||+.++|+..        ..++.....+....... + ...+++
T Consensus       146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~--------~~~~~~~~~~~~~~~~~-~-~~~~~~  215 (255)
T 2dkn_A          146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL--------QASKADPRYGESTRRFV-A-PLGRGS  215 (255)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH--------HHHHHCTTTHHHHHSCC-C-TTSSCB
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh--------hhcccchhhHHHHHHHH-H-HhcCCC
Confidence            0124467999999999999988766   589999999999998741        11111000000000000 1 234789


Q ss_pred             cHHHHHHHHHHHHhCC---C-CCcEEecCCCCCCHHH
Q 019060          246 YVSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLE  278 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~---~-~~~~~~~~~~~~s~~e  278 (346)
                      +++|+|++++.++..+   . ++.|++.++..+++.|
T Consensus       216 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e  252 (255)
T 2dkn_A          216 EPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred             CHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence            9999999999999765   2 5589999887665543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.91  E-value=9.8e-24  Score=182.00  Aligned_cols=219  Identities=17%  Similarity=0.076  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--------CCCeeEEecccCCcccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--------HPRFELIRHDVTEPLLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~------   96 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.............        ..++.++.+|+++.+..      
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEG-ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            46899999999999999999999999 9999999864222111111110        13578899999987532      


Q ss_pred             ------CC-CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCC
Q 019060           97 ------EV-DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        97 ------~~-d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~i~~SS~~v~~~~~~~~~  159 (346)
                            ++ |+|||+||......    ..+++...+++|+.++.++++++...    +  .+||++||...+.       
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------  157 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------  157 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH-------
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc-------
Confidence                  34 99999999765322    23456788899999999999887653    3  3899999986542       


Q ss_pred             CCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEec
Q 019060          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
                               +..+...|+.+|.+.|.+.+.++.+   .+++++++||+.++++....    ....+......+.      
T Consensus       158 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~------  218 (264)
T 2pd6_A          158 ---------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK----VPQKVVDKITEMI------  218 (264)
T ss_dssp             ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGGC------
T ss_pred             ---------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh----cCHHHHHHHHHhC------
Confidence                     1223467999999999999988776   58999999999999986321    1111111111111      


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHH
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLEL  279 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei  279 (346)
                         ....+.+++|+|++++.++..+.    +..+++.++..++...+
T Consensus       219 ---~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~  262 (264)
T 2pd6_A          219 ---PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY  262 (264)
T ss_dssp             ---TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred             ---CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence               11257899999999999987532    55788888877665543

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.91  E-value=8.6e-24  Score=181.74  Aligned_cols=221  Identities=18%  Similarity=0.130  Sum_probs=156.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+.... + ...+.++.+|+++.+..            ++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREG-ATVAIADIDIERARQAAAE-I-GPAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 9999999854322222222 2 24678999999987432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc------CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......    ..+++...+++|+.++.++++++...      +.++|++||...+.                
T Consensus        84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  147 (259)
T 4e6p_A           84 DILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR----------------  147 (259)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc----------------
Confidence            99999999765432    23456778889999999998876432      23899999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC---CCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG---EPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  242 (346)
                      +..+...|+.+|...|.+.+.++.+.   ++++.+++||.++++...     ....++......   .......+.....
T Consensus       148 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~  222 (259)
T 4e6p_A          148 GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWD-----GVDALFARYENRPRGEKKRLVGEAVPFG  222 (259)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHH-----HHHHHHHHHHTCCTTHHHHHHHHHSTTS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhh-----hhhhhhhhhccCChHHHHHHHhccCCCC
Confidence            22334679999999999999988765   799999999999998521     111112111111   0011111112234


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .+.+++|+|++++.++....    ++.+++.+|..+|
T Consensus       223 r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          223 RMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             SCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence            68899999999999886432    5689999887654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.90  E-value=1.6e-23  Score=182.18  Aligned_cols=234  Identities=15%  Similarity=0.092  Sum_probs=168.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccC---------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~---------   96 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+.....+....+...    ..+.++.+|+++.+..         
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAG-ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999 99999998643222222222111    2678899999997532         


Q ss_pred             ---CCCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                         ++|++||+||.... .    ...+++...+++|+.++.++++++..    .+. ++|++||...+.           
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------  156 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN-----------  156 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-----------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-----------
Confidence               58999999996322 1    12345677889999999999887643    233 899999998763           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +..+...|+.+|...+.+.+.++.+.   ++++.+++||.++++.......  ............++        
T Consensus       157 -----~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~--------  221 (281)
T 3svt_A          157 -----THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE--SAELSSDYAMCTPL--------  221 (281)
T ss_dssp             -----CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHHHHHHHHCSS--------
T ss_pred             -----CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc--CHHHHHHHHhcCCC--------
Confidence                 22334679999999999999988765   5899999999999874211000  01122222222221        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC-HHHHHHHHHHHcCCCc
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT-MLELAENVKELINPNV  291 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s-~~ei~~~i~~~~g~~~  291 (346)
                       ..+.+++|+|++++.++....    ++.+++.+|..++ ..++.+.+.+.+|.+.
T Consensus       222 -~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~  276 (281)
T 3svt_A          222 -PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA  276 (281)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred             -CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence             246689999999999987543    5689998888776 7788888888887653

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.90  E-value=7.5e-24  Score=186.36  Aligned_cols=231  Identities=11%  Similarity=0.032  Sum_probs=163.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+..........+..  ..++.++.+|+++.+..            
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLG-AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999999864222111111110  24688999999987432            


Q ss_pred             CCCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH-----cCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR-----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||+||.....    ....++...+++|+.++.++++++..     .+. ++|++||...+.              
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------  169 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------  169 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--------------
Confidence            589999999965432    22345678889999999999877643     233 899999987753              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        +..+...|+.+|.+.|.+.+.++.+   .+++++++|||.++++...... ....  .......+.++         .
T Consensus       170 --~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~p~---------~  236 (302)
T 1w6u_A          170 --GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT--FEKEMIGRIPC---------G  236 (302)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH--HHHHHHTTCTT---------S
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh--hHHHHHhcCCc---------C
Confidence              2233467999999999999998877   6899999999999987321110 1000  11122222211         2


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHcCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELINP  289 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~g~  289 (346)
                      .+.+++|+|++++.++....    +..+++.++..+++.++++.+.+..|.
T Consensus       237 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~  287 (302)
T 1w6u_A          237 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE  287 (302)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred             CCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence            47789999999999886532    457999998888888888777766543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.90  E-value=5.1e-23  Score=177.36  Aligned_cols=216  Identities=11%  Similarity=0.066  Sum_probs=153.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..........+..  ..++.++.+|+++.+..            
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEG-AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999999854221111111111  24688899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+..              
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  150 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQP--------------  150 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCC--------------
Confidence            6999999999754322    234567788999999998888764    3454 8999999987742              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH-----------HHHHHHHHcCCCeE
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPLT  233 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~  233 (346)
                        ..+...|+.+|...+.+.+.++.+   .+++++++|||.+++|...    ...           ...........   
T Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---  221 (263)
T 3ai3_A          151 --LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWI----KTAKELTKDNGGDWKGYLQSVADEH---  221 (263)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHH----HHHHHHTTTTTCCHHHHHHHHHHHH---
T ss_pred             --CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchh----hhhHhhhcccCCcHHHHHHHHHhcC---
Confidence              223357999999999999988876   5899999999999987421    111           11111111110   


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                           .....+.+++|+|++++.++..+.    +..+++.+|..++
T Consensus       222 -----~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          222 -----APIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             -----CTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             -----CCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence                 011357899999999999987543    4578888877654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.90  E-value=6.2e-23  Score=178.34  Aligned_cols=231  Identities=12%  Similarity=0.036  Sum_probs=150.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---c-CCCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~d~~~~~~~----------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+.....   . ...++.++.+|+++.+..          
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            36799999999999999999999999 99999998642211111111   1 123578899999987432          


Q ss_pred             --CCCEEEEcccCCCccc--------cccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccc-cCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEV-YGDPLVHPQDE  161 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v-~~~~~~~~~~e  161 (346)
                        ++|+|||+||......        ..+++...+++|+.++.++++++...    +.++|++||... +.         
T Consensus        84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~---------  154 (278)
T 1spx_A           84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------  154 (278)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------
T ss_pred             cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc---------
Confidence              6999999999654321        33456778899999999998877543    569999999876 43         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC---ccH--HHHHHHHHHcCCCeE
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD---GRV--VSNFIAQAIRGEPLT  233 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~---~~~--~~~~~~~~~~~~~~~  233 (346)
                             +..+...|+.+|...+.+.+.++.+   .++++++++||.++++......   ...  +...........+  
T Consensus       155 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p--  225 (278)
T 1spx_A          155 -------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--  225 (278)
T ss_dssp             -------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT--
T ss_pred             -------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC--
Confidence                   2223357999999999999988765   4899999999999988532110   000  0000111111111  


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCCCCCHHHHHHHHHHHc
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPGEFTMLELAENVKELI  287 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~~~s~~ei~~~i~~~~  287 (346)
                             ...+.+++|+|++++.++..+    . +..+++.+|..+++.++++.+.+.+
T Consensus       226 -------~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          226 -------AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             -------TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             -------CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence                   124789999999999988642    2 5578899999999999999988764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=1.8e-22  Score=169.40  Aligned_cols=194  Identities=16%  Similarity=0.253  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHH-hcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      |+++||||||||+||++++++|+ +.| ++|++++|+...   ....+. ...++.++.+|+++.+.     .++|+|||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g-~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~   79 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTD-MHITLYGRQLKT---RIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV   79 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCC-CEEEEEESSHHH---HSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCC-ceEEEEecCccc---cchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence            34569999999999999999999 899 999999995320   222221 34578999999998753     37999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC-chHHhHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKR  181 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~  181 (346)
                      +||..               |+. +.++++++++.++ |||++||..+|+..... ..+.      ...... .|+.+|.
T Consensus        80 ~ag~~---------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~-~~~~------~~~~~~~~y~~~K~  136 (221)
T 3r6d_A           80 GAMES---------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVA-LEKW------TFDNLPISYVQGER  136 (221)
T ss_dssp             SCCCC---------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHH-HHHH------HHHTSCHHHHHHHH
T ss_pred             cCCCC---------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcc-cccc------cccccccHHHHHHH
Confidence            99743               333 8899999999887 89999999988632110 0000      000112 6999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc-ceeecccHHHHHHHHHHHH--
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT-QTRSFCYVSDMVDGLIRLM--  258 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~~i~~~~--  258 (346)
                      .+|.+++    ..+++++++||+.++++...                +. ........ ....+++.+|+|++++.++  
T Consensus       137 ~~e~~~~----~~~i~~~~vrpg~v~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~  195 (221)
T 3r6d_A          137 QARNVLR----ESNLNYTILRLTWLYNDPEX----------------TD-YELIPEGAQFNDAQVSREAVVKAIFDILHA  195 (221)
T ss_dssp             HHHHHHH----HSCSEEEEEEECEEECCTTC----------------CC-CEEECTTSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHH----hCCCCEEEEechhhcCCCCC----------------cc-eeeccCCccCCCceeeHHHHHHHHHHHHHh
Confidence            9999875    35899999999999987311                11 11111111 1124899999999999999  


Q ss_pred             hCCC---CCcEEecCCC
Q 019060          259 EGEN---TGPINIGNPG  272 (346)
Q Consensus       259 ~~~~---~~~~~~~~~~  272 (346)
                      ..+.   .+.+.+.++.
T Consensus       196 ~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          196 ADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             SCCGGGTTEEEEEECTT
T ss_pred             cChhhhhcceeeecCCC
Confidence            7654   4567776543

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.90  E-value=1.2e-22  Score=174.79  Aligned_cols=215  Identities=17%  Similarity=0.110  Sum_probs=153.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+............ ...++.++.+|+++.+..            +
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAG-ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999986422211111111 124688999999987432            6


Q ss_pred             CCEEEEcccCCC-ccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPAS-PIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||... ...    ..+++...+++|+.++.++++++..    .+. ++|++||...+..              
T Consensus        91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  156 (260)
T 3awd_A           91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV--------------  156 (260)
T ss_dssp             CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhccc--------------
Confidence            999999999654 211    2234577889999999999887754    344 8999999876532              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccH-HHHHHHHHHcCCCeEEecCCcceee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV-VSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      .+..+...|+.+|.+.|.+++.++.+   .+++++++||+.++++....   .. .+.+......+.++         ..
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~---~~~~~~~~~~~~~~~~~---------~~  224 (260)
T 3awd_A          157 NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF---GMEKPELYDAWIAGTPM---------GR  224 (260)
T ss_dssp             CSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHH---HHTCHHHHHHHHHTCTT---------SS
T ss_pred             CCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhc---ccCChHHHHHHHhcCCc---------CC
Confidence            12223367999999999999998877   68999999999999986320   11 12233333332221         24


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++++|+|++++.++....    +..+++.++.
T Consensus       225 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            7899999999999986532    4478888764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.90  E-value=2.8e-22  Score=172.24  Aligned_cols=205  Identities=14%  Similarity=0.100  Sum_probs=154.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.....        ...+.++.+|+++.+..            ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRN-YRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999 99999998643221        23688999999997532            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+..              .+
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------------~~  163 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQP--------------MV  163 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSC--------------BT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccC--------------CC
Confidence            99999999765332    23456778899999999999877    45554 8999999876532              12


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++++++||.++++....   .    .........         ....+.+
T Consensus       164 ~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~---~----~~~~~~~~~---------p~~r~~~  227 (260)
T 3un1_A          164 GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA---E----THSTLAGLH---------PVGRMGE  227 (260)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG---G----GHHHHHTTS---------TTSSCBC
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH---H----HHHHHhccC---------CCCCCcC
Confidence            2344679999999999999998886   7999999999999986421   1    111112111         1235778


Q ss_pred             HHHHHHHHHHHHhCCC--CCcEEecCCCCC
Q 019060          247 VSDMVDGLIRLMEGEN--TGPINIGNPGEF  274 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~--~~~~~~~~~~~~  274 (346)
                      ++|+|++++.+.+...  +..+++.+|..+
T Consensus       228 ~~dva~av~~L~~~~~itG~~i~vdGG~~~  257 (260)
T 3un1_A          228 IRDVVDAVLYLEHAGFITGEILHVDGGQNA  257 (260)
T ss_dssp             HHHHHHHHHHHHHCTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhcccCCCCCcEEEECCCeec
Confidence            9999999999855443  557888887654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.90  E-value=7.4e-23  Score=174.52  Aligned_cols=212  Identities=17%  Similarity=0.087  Sum_probs=155.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++|++|||||+|+||++++++|+++| ++|++++|......+...+.+  ...++.++.+|+++.+..            
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEG-YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999988874322222222211  124678899999997432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  146 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV---------------  146 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC---------------
Confidence            6999999999764322    33456778999999999999987    44454 899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+   .++++.+++||.+.++....    +..........+.++         ..+
T Consensus       147 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~---------~r~  212 (246)
T 3osu_A          147 -GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA----LSDELKEQMLTQIPL---------ARF  212 (246)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC----SCHHHHHHHHTTCTT---------CSC
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc----cCHHHHHHHHhcCCC---------CCC
Confidence             2223467999999999999988874   47999999999999886432    223333443433322         246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+++|+|++++.++..+.    +..+++.+|.
T Consensus       213 ~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          213 GQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            788999999999887543    4578888764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.90  E-value=6.5e-23  Score=174.72  Aligned_cols=212  Identities=17%  Similarity=0.126  Sum_probs=150.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+..... .+...  ..+++++.+|+.+.+..        ++|+||
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATG-ARVVAVSRTQADLD-SLVRE--CPGIEPVCVDLGDWEATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHH--STTCEEEECCTTCHHHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHH--cCCCCEEEEeCCCHHHHHHHHHHcCCCCEEE
Confidence            46899999999999999999999999 99999998532111 11111  13567889999986432        589999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+||......    ..+++...+++|+.++.++++++...    + . ++|++||...+.                +..+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~  145 (244)
T 3d3w_A           82 NNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AVTN  145 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCTT
T ss_pred             ECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc----------------CCCC
Confidence            9999754322    22446778899999998888877543    4 3 899999988763                2233


Q ss_pred             CCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      ...|+.+|...|.+++.++.+   .+++++++||+.++++........  .........+.+         ...+++++|
T Consensus       146 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~d  214 (244)
T 3d3w_A          146 HSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRIP---------LGKFAEVEH  214 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS--TTHHHHHHHTCT---------TCSCBCHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC--hHHHHHHHhhCC---------CCCCcCHHH
Confidence            467999999999999998776   478999999999998752100000  011122222211         136889999


Q ss_pred             HHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          250 MVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       250 va~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +|++++.++....    ++.|++.++..
T Consensus       215 va~~~~~l~~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          215 VVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHcCccccCCCCCEEEECCCcc
Confidence            9999999997542    44788887654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.90  E-value=4.1e-22  Score=172.35  Aligned_cols=210  Identities=17%  Similarity=0.108  Sum_probs=155.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+.....  ..++.++.+|+++.+..            ++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAG-ARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGRL   86 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999999754433322222  34688899999987432            69


Q ss_pred             CEEEEcccCCCc------cccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASP------IFYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |++||+||....      ....+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~---------------  151 (271)
T 3tzq_B           87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHA---------------  151 (271)
T ss_dssp             CEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------------
T ss_pred             CEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcC---------------
Confidence            999999997632      1133456788999999999999988    55555 899999988763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+   .++++.+++||.++++.....   .............+.         ..+
T Consensus       152 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~---------~r~  218 (271)
T 3tzq_B          152 -AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG---LPQPIVDIFATHHLA---------GRI  218 (271)
T ss_dssp             -BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------CHHHHHHHHTTSTT---------SSC
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc---CCHHHHHHHHhcCCC---------CCC
Confidence             2233467999999999999998887   589999999999999864311   112222222222211         246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..++|+|++++.++....    +..+++.+|
T Consensus       219 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          219 GEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            789999999999987543    457888777

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.90  E-value=8.8e-23  Score=176.02  Aligned_cols=218  Identities=16%  Similarity=0.127  Sum_probs=153.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++++|||||+|+||++++++|+++| +.|++++|......+...+...  ..++.++.+|+++.+..           
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKG-YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            346799999999999999999999999 9999998754333333332222  23688999999997532           


Q ss_pred             -CCCEEEEcccCC--Cccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPA--SPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~--~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|+|||+||..  ....    ..+++...+++|+.++..+++++    ++.+. ++|++||...++.           
T Consensus        84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----------  152 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA-----------  152 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC-----------
T ss_pred             CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc-----------
Confidence             699999999942  2111    23456778999999999999987    55554 8999999855421           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                         .+..+...|+.+|.+.+.+.+.++.+   .++++++++||.++++....    ............         ...
T Consensus       153 ---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~---------~p~  216 (264)
T 3i4f_A          153 ---PGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA----TIQEARQLKEHN---------TPI  216 (264)
T ss_dssp             ---CCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC----CHHHHHHC----------------
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh----ccHHHHHHHhhc---------CCC
Confidence               12233467999999999999988877   57999999999999875321    222222111111         112


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      ..+.+++|+|++++.++....    +..+++.+|-...
T Consensus       217 ~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          217 GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             -CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence            357789999999999997543    5578888876543

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.89  E-value=4.1e-22  Score=171.07  Aligned_cols=214  Identities=17%  Similarity=0.144  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+...+.  ...+.++.+|+++.+..            ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEG-ATVLGLDLKPPAGEEPAAEL--GAAVRFRNADVTNEADATAALAFAKQEFGHV   82 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHh--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999999764433322222  23678899999987432            69


Q ss_pred             CEEEEcccCCCccc--------cccChHHHHHHHHHHHHHHHHHHHHc----------CC-eEEEEecccccCCCCCCCC
Q 019060           99 DQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        99 d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~i~~SS~~v~~~~~~~~~  159 (346)
                      |++||+||......        ..+++...+++|+.++..+++++...          +. ++|++||...+.       
T Consensus        83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~-------  155 (257)
T 3tpc_A           83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD-------  155 (257)
T ss_dssp             CEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-------
T ss_pred             CEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-------
Confidence            99999999764322        23556788999999999999887643          23 899999988763       


Q ss_pred             CCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEec
Q 019060          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
                               +..+...|+.+|...+.+.+.++.+   .++++.+++||.+.++....    .............++    
T Consensus       156 ---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~----  218 (257)
T 3tpc_A          156 ---------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG----MPQDVQDALAASVPF----  218 (257)
T ss_dssp             ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSSS----
T ss_pred             ---------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhcc----CCHHHHHHHHhcCCC----
Confidence                     2223467999999999999988877   58999999999999875321    111111111111111    


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s  275 (346)
                          ...+..++|+|++++.+++...  +..+++.+|..++
T Consensus       219 ----~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          219 ----PPRLGRAEEYAALVKHICENTMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             ----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred             ----CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCCccCC
Confidence                0357899999999999998644  5578888876554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.89  E-value=3.7e-22  Score=170.65  Aligned_cols=214  Identities=14%  Similarity=0.071  Sum_probs=150.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      |+|++|||||+|+||++++++|+++| ++|++++|+.............  ..++.++.+|+++.+..            
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARG-DRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            36799999999999999999999999 9999999864222111111101  23588899999987432            


Q ss_pred             CCCEEEEcccCCCccc-------cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 EVDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      ++|+|||+||......       ..+++...+++|+.++..+++++    ++.+. ++|++||...+..           
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  148 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVA-----------  148 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC-----------
Confidence            6999999999754322       23456778899999987766655    34455 8999999887632           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                           ..+...|+.+|...|.+.+.++.+.   +++++++||+.++++.....  .....+........++         
T Consensus       149 -----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~---------  212 (250)
T 2cfc_A          149 -----FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWR--LDQPELRDQVLARIPQ---------  212 (250)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHH--HTSHHHHHHHHTTCTT---------
T ss_pred             -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccc--cCCHHHHHHHHhcCCC---------
Confidence                 2234679999999999999988765   89999999999999863210  0001222222222211         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..+.+++|+|++++.++..+.    +..+++.+|.
T Consensus       213 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          213 KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            247799999999999997643    4467777653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.89  E-value=1.2e-23  Score=174.79  Aligned_cols=185  Identities=14%  Similarity=0.179  Sum_probs=139.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi~~  104 (346)
                      |+||||||+|+||++++++|+++   +|++++|+.... +.......  . .++.+|+.+.+..        ++|+|||+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGAL-AELAREVG--A-RALPADLADELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHH-HHHHHHHT--C-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHH-HHHHHhcc--C-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence            68999999999999999999987   899998853221 11111111  2 7889999987532        69999999


Q ss_pred             ccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHh
Q 019060          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      ||......    ..+++...+++|+.++.++++++++.+. +||++||..++.                +..+...|+.+
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y~~s  137 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYV----------------QVPGFAAYAAA  137 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHH----------------SSTTBHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhcc----------------CCCCcchHHHH
Confidence            99764322    3456778899999999999999976665 899999998873                23344679999


Q ss_pred             HHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          180 KRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       180 K~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      |...|.+++.++.+   .+++++++||+.++++...                       +.+.....+++++|+|++++.
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------------------~~~~~~~~~~~~~dva~~~~~  194 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA-----------------------PLGGPPKGALSPEEAARKVLE  194 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------------------GGTSCCTTCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc-----------------------ccCCCCCCCCCHHHHHHHHHH
Confidence            99999999988776   5899999999999987410                       011223579999999999999


Q ss_pred             HHhCCCC
Q 019060          257 LMEGENT  263 (346)
Q Consensus       257 ~~~~~~~  263 (346)
                      +++++..
T Consensus       195 ~~~~~~~  201 (207)
T 2yut_A          195 GLFREPV  201 (207)
T ss_dssp             HHC--CC
T ss_pred             HHhCCCC
Confidence            9987663

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.89  E-value=1.9e-22  Score=176.08  Aligned_cols=215  Identities=18%  Similarity=0.104  Sum_probs=155.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC--CCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH--PRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++|+.........++...  .++.++.+|+++.+..            
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAG-ANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 99999999754333322222221  3688999999997432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.               
T Consensus       119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~---------------  183 (293)
T 3rih_A          119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV---------------  183 (293)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc---------------
Confidence            6899999999765432    33456788999999999999887    34444 999999986431               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      .+..+...|+.+|...+.+.+.++.+   .++++++++||.++++...    ..............++         ..+
T Consensus       184 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~p~---------~r~  250 (293)
T 3rih_A          184 TGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLV----DMGEEYISGMARSIPM---------GML  250 (293)
T ss_dssp             BBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHH----HTCHHHHHHHHTTSTT---------SSC
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchh----hccHHHHHHHHhcCCC---------CCC
Confidence            01123357999999999999988876   4899999999999987421    1112233333333222         235


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..++|+|++++.++....    +..+++.+|..+
T Consensus       251 ~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          251 GSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            678999999999886542    557888877654

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.89  E-value=2.2e-23  Score=172.40  Aligned_cols=181  Identities=18%  Similarity=0.138  Sum_probs=138.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi~  103 (346)
                      +|+||||||+|+||++++++|+ +| ++|++++|+..                .+.+|+.+.+..        ++|+|||
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g-~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~   64 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KK-AEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVS   64 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TT-SEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEE
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CC-CeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEE
Confidence            3689999999999999999999 99 99999998532                467888876432        4899999


Q ss_pred             cccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060          104 LACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus       104 ~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      +||.......    .++....+++|+.++.++++++.+.   +.++|++||...+.                +..+...|
T Consensus        65 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~----------------~~~~~~~Y  128 (202)
T 3d7l_A           65 ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED----------------PIVQGASA  128 (202)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----------------CCTTCHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----------------CCCccHHH
Confidence            9996543222    2344567789999999999999876   45899999987653                22334679


Q ss_pred             HHhHHHHHHHHHHHHHH--hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHH
Q 019060          177 DEGKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL  254 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~--~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i  254 (346)
                      +.+|...|.+++.++.+  .+++++++||+.++++..         .    ..         +.....++++++|+|+++
T Consensus       129 ~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~---------~----~~---------~~~~~~~~~~~~dva~~~  186 (202)
T 3d7l_A          129 AMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD---------K----LE---------PFFEGFLPVPAAKVARAF  186 (202)
T ss_dssp             HHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH---------H----HG---------GGSTTCCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh---------h----hh---------hhccccCCCCHHHHHHHH
Confidence            99999999999988765  389999999999998731         0    00         111235789999999999


Q ss_pred             HHHHhCCCC-CcEEe
Q 019060          255 IRLMEGENT-GPINI  268 (346)
Q Consensus       255 ~~~~~~~~~-~~~~~  268 (346)
                      +.++..... +.|++
T Consensus       187 ~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          187 EKSVFGAQTGESYQV  201 (202)
T ss_dssp             HHHHHSCCCSCEEEE
T ss_pred             HHhhhccccCceEec
Confidence            988865544 46765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.89  E-value=6.7e-23  Score=177.69  Aligned_cols=215  Identities=14%  Similarity=0.089  Sum_probs=151.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|......+.....+  ...++.++.+|+.+.+..            
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G-~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999999983222211111111  124678899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEeccccc-CCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVY-GDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~-~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++...   +.+||++||...+ ..               
T Consensus        99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  163 (274)
T 1ja9_A           99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG---------------  163 (274)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS---------------
T ss_pred             CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC---------------
Confidence            6999999999754321    23445778899999999999888664   3589999998876 31               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc--------cHH-HHHHHHHHcCCCeEEec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--------RVV-SNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~  236 (346)
                       ..+...|+.+|.+.|.+++.++.+.   +++++++|||.++++.......        ... .........+.      
T Consensus       164 -~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  236 (274)
T 1ja9_A          164 -IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN------  236 (274)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS------
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC------
Confidence             1223569999999999999888764   8999999999998763210000        000 11111111111      


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                         ....+++++|+|++++.++..+.    ++.|++.+|
T Consensus       237 ---~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          237 ---PLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence               22368899999999999997532    457888775

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.89  E-value=4.2e-22  Score=170.76  Aligned_cols=213  Identities=14%  Similarity=0.034  Sum_probs=148.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCe-eEEecccCCccc-----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRF-ELIRHDVTEPLL-----------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~-----------~~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+...... ..+.+. .++ .++.+|+++.+.           .++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASG-ARLILIDREAAALDR-AAQELG-AAVAARIVADVTDAEAMTAAAAEAEAVAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHHG-GGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhc-ccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence            46799999999999999999999999 999999986422111 111111 245 789999998643           268


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||.......    .++....+++|+.++..+++++    ++.+. +||++||...+..              .+
T Consensus        87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------~~  152 (254)
T 2wsb_A           87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIV--------------NR  152 (254)
T ss_dssp             CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------CS
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccC--------------CC
Confidence            999999997653322    2345678889999977776654    44455 8999999887642              12


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|.+.|.+.+.++.+.   +++++++||+.++++.......  .+..........+         ...+++
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~  221 (254)
T 2wsb_A          153 PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE--RPELFETWLDMTP---------MGRCGE  221 (254)
T ss_dssp             SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT--CHHHHHHHHHTST---------TSSCBC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc--ChHHHHHHHhcCC---------CCCCCC
Confidence            2334679999999999999888775   8999999999999874210000  0122222222221         135789


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ++|+|++++.++..+.    +..+++.++
T Consensus       222 ~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          222 PSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            9999999999986532    446777765

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.89  E-value=1.3e-22  Score=173.34  Aligned_cols=211  Identities=13%  Similarity=0.043  Sum_probs=147.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+............  ...++.++.+|+.+.+..            
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAG-STVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999 999999985422111111111  124688899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ...++...+++|+.++.++++++    ++.+. +||++||...+..              
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  150 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTG--------------  150 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCC--------------
Confidence            6999999999764322    23456778899999997766654    44555 8999999865421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...|.+.+.++.+.   +++++++||+.++++....    +............+         ...+
T Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~~  215 (248)
T 2pnf_A          151 --NVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV----LSEEIKQKYKEQIP---------LGRF  215 (248)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SCHHHHHHHHHTCT---------TSSC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh----ccHHHHHHHHhcCC---------CCCc
Confidence              1123569999999999999887653   7899999999999875321    11112222221111         1257


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ++++|+|++++.++....    ++.|++.++
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          216 GSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            899999999999987532    457888775

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.89  E-value=3.3e-22  Score=170.05  Aligned_cols=205  Identities=17%  Similarity=0.125  Sum_probs=151.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------EVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~d   99 (346)
                      |+|+||||||+|+||++++++|+++| ++|++++|+..  .         ..+.++.+|+++.+..           ++|
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G-~~V~~~~r~~~--~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d   68 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARG-YRVVVLDLRRE--G---------EDLIYVEGDVTREEDVRRAVARAQEEAPLF   68 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSCC--S---------SSSEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEccCcc--c---------cceEEEeCCCCCHHHHHHHHHHHHhhCCce
Confidence            36899999999999999999999999 99999998643  1         2457899999986432           689


Q ss_pred             EEEEcccCCCccccc----c----ChHHHHHHHHHHHHHHHHHHHHc----C-------CeEEEEecccccCCCCCCCCC
Q 019060          100 QIYHLACPASPIFYK----Y----NPVKTIKTNVIGTLNMLGLAKRV----G-------ARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~----~----~~~~~~~~n~~~~~~l~~~~~~~----~-------~r~i~~SS~~v~~~~~~~~~~  160 (346)
                      +|||+||........    .    ++...+++|+.++.++++++...    +       .+||++||...+..       
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------  141 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG-------  141 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC-------
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccC-------
Confidence            999999975432211    1    56788899999999999887643    1       18999999987742       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                               ..+...|+.+|...|.+.+.++.+.   +++++++|||.++++....    ....+........++     
T Consensus       142 ---------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~-----  203 (242)
T 1uay_A          142 ---------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG----LPEKAKASLAAQVPF-----  203 (242)
T ss_dssp             ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT----SCHHHHHHHHTTCCS-----
T ss_pred             ---------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc----cchhHHHHHHhhCCC-----
Confidence                     2234679999999999998887764   8999999999999874221    112222222222221     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s  275 (346)
                         ...+++++|+|++++.++....  ++.+++.++..++
T Consensus       204 ---~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          204 ---PPRLGRPEEYAALVLHILENPMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             ---SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred             ---cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCCeecC
Confidence               0247899999999999998643  5578888876553

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.89  E-value=3.3e-22  Score=169.43  Aligned_cols=195  Identities=13%  Similarity=0.112  Sum_probs=130.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      ++|+||||||+|+||++++++|+++|.++|++++|+.....    . +...++.++.+|++|.+.     .++|+|||++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~----~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a   96 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH----K-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL   96 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC----S-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc----c-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence            45789999999999999999999998569999998643221    1 123478999999998753     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      +...              ....+.++++++++.++ |||++||..+|+...........   .....    +...+..+|
T Consensus        97 ~~~~--------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~  155 (236)
T 3qvo_A           97 TGED--------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNN---AVIGE----PLKPFRRAA  155 (236)
T ss_dssp             CSTT--------------HHHHHHHHHHHHHHTTCCEEEEECCCCC-------------------CG----GGHHHHHHH
T ss_pred             CCCc--------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchh---hcccc----hHHHHHHHH
Confidence            7522              11346689999999887 89999999998754322211110   01122    333444555


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc-ceeecccHHHHHHHHHHHHhCCC-
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT-QTRSFCYVSDMVDGLIRLMEGEN-  262 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~~i~~~~~~~~-  262 (346)
                      +.+    +..+++++++||+.++++....                  ......+. ....+++++|+|++++.++..+. 
T Consensus       156 ~~l----~~~gi~~~~vrPg~i~~~~~~~------------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~  213 (236)
T 3qvo_A          156 DAI----EASGLEYTILRPAWLTDEDIID------------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEK  213 (236)
T ss_dssp             HHH----HTSCSEEEEEEECEEECCSCCC------------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTT
T ss_pred             HHH----HHCCCCEEEEeCCcccCCCCcc------------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCccc
Confidence            554    3468999999999999874211                  01111111 12368999999999999998765 


Q ss_pred             --CCcEEecCCCC
Q 019060          263 --TGPINIGNPGE  273 (346)
Q Consensus       263 --~~~~~~~~~~~  273 (346)
                        ++.|++.+++.
T Consensus       214 ~~g~~~~i~~~~~  226 (236)
T 3qvo_A          214 HIGENIGINQPGT  226 (236)
T ss_dssp             TTTEEEEEECSSC
T ss_pred             ccCeeEEecCCCC
Confidence              56899988754

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.89  E-value=1.7e-22  Score=174.35  Aligned_cols=214  Identities=16%  Similarity=0.075  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCccc-------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~-------------~   96 (346)
                      .+|+||||||+|+||++++++|+++| +.|++++|+..........+. ...++.++.+|+.+.+.             .
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 999999985422211111111 12367889999998632             3


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+..              
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------  157 (266)
T 1xq1_A           92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS--------------  157 (266)
T ss_dssp             CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC--------------
Confidence            6899999999654322    23456778899999999999888    44454 9999999877531              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...|.+.+.++.+.   +++++++||+.++++.....   ....+.......         .....+
T Consensus       158 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~---------~~~~~~  223 (266)
T 1xq1_A          158 --ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDDEFKKVVISR---------KPLGRF  223 (266)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------------
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh---cCHHHHHHHHhc---------CCCCCC
Confidence              2233679999999999999888764   89999999999999853211   001111111111         111247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++++|+|++++.++..+.    +..+++.+|..
T Consensus       224 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          224 GEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             cCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            899999999999886532    45788887654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.89  E-value=4.3e-22  Score=173.04  Aligned_cols=221  Identities=14%  Similarity=0.075  Sum_probs=150.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      +++++|||||+|+||++++++|+++| +.|++++|......+.....+   ....+.++.+|+++.+..           
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAG-ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            46799999999999999999999999 999999984322222222211   134688899999997432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.              
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~--------------  168 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV--------------  168 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCccccc--------------
Confidence             6999999999765433    33456778999999999999886    44444 899999987653              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHH--HHcCCC-eEEecCCcc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ--AIRGEP-LTVQAPGTQ  240 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~  240 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.+++||.+.++.....    .......  ...... .........
T Consensus       169 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p  242 (281)
T 3v2h_A          169 --ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ----IPDQARTRGITEEQVINEVMLKGQP  242 (281)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------CCT
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh----cchhhhhcCCCHHHHHHHHHHhcCC
Confidence              22233579999999999999888764   79999999999998753211    1110000  000000 001122233


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ...+++++|+|++++.++....    +..+++.+|.
T Consensus       243 ~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          243 TKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             TCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             CCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            4578999999999999987643    4578887763

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.89  E-value=6.1e-22  Score=170.61  Aligned_cols=211  Identities=15%  Similarity=0.045  Sum_probs=150.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..... .....+. .++.++.+|+++.+..            ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i   87 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAG-ATVAIADLDVMAAQ-AVVAGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGGF   87 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999998542211 1111111 2678899999986432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......    ..+++...+++|+.++.++++++..    .+  .++|++||...+..               
T Consensus        88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  152 (263)
T 3ak4_A           88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVG---------------  152 (263)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------------
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccC---------------
Confidence            99999999754322    2245677889999999998887654    23  49999999876531               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH-----------HHHHHHHHcCCCeEE
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPLTV  234 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~  234 (346)
                       ..+...|+.+|...|.+.+.++.+.   +++++++|||.++++...    ...           ...........    
T Consensus       153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~----  223 (263)
T 3ak4_A          153 -APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE----REIIWEAELRGMTPEAVRAEYVSLT----  223 (263)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHH----HHHHHHHHHHTSCHHHHHHHHHHTC----
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhh----hhccccccccccCcHHHHHHHHhcC----
Confidence             1233579999999999999887764   899999999999987411    111           11111111111    


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                           ....+++++|+|++++.++..+.    +..+++.+|..
T Consensus       224 -----p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          224 -----PLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             -----TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             -----CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCEe
Confidence                 11358899999999999987542    45788887754

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.89  E-value=1.2e-22  Score=175.20  Aligned_cols=220  Identities=16%  Similarity=0.102  Sum_probs=154.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+.........+...  ..++.++.+|+.+.+..            
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999 9999999965433222222111  24688999999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++...    +  .+||++||...+......    .    
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~----  163 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----L----  163 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----T----
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----c----
Confidence            4999999999764322    23456678899999999998887542    2  489999998765321100    0    


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       .+..+...|+.+|...|.+++.++.+.   +++++++|||.++++.....    ............++         ..
T Consensus       164 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~---------~~  229 (265)
T 1h5q_A          164 -NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPL---------NR  229 (265)
T ss_dssp             -TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----CHHHHHHHHHTCTT---------SS
T ss_pred             -cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc----chhHHHHHHhcCcc---------cC
Confidence             122345679999999999999888764   79999999999998753211    12222222221111         24


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++++|+|++++.++..+.    ++.+++.+|..
T Consensus       230 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          230 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CCCHHHHHHHHHhhccCchhcCcCcEEEecCCEe
Confidence            7899999999999987542    55788887653

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.89  E-value=1.1e-21  Score=170.64  Aligned_cols=214  Identities=14%  Similarity=0.094  Sum_probs=150.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..+++||||||+|+||++++++|+++| ++|++++|+..... .......  ..++.++.+|+.+.+..           
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAG-ADVAIWYNSHPADE-KAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHT-CEEEEEESSSCCHH-HHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            346899999999999999999999999 99999998653322 2221111  24688899999987432           


Q ss_pred             -CCCEEEEcccCCCc------cccccChHHHHHHHHHH----HHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASP------IFYKYNPVKTIKTNVIG----TLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~------~~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|+|||+||....      ....++....+++|+.+    +..++..+++.+. +||++||...+..           
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  178 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIV-----------  178 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC-----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccC-----------
Confidence             49999999997643      12234456788999999    5566677776665 9999999876421           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                         .+..+...|+.+|...|.+++.++.+.   + ++++++||.+.++......    ...........+         .
T Consensus       179 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~p---------~  241 (279)
T 3ctm_A          179 ---NIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS----KDMKAKWWQLTP---------L  241 (279)
T ss_dssp             ------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC----HHHHHHHHHHST---------T
T ss_pred             ---CCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC----hHHHHHHHHhCC---------c
Confidence               012334679999999999999988774   5 8999999999887532111    111111111111         1


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+++++|+|++++.++..+.    +..+++.+|..
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            247899999999999987532    45788877653

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.89  E-value=2.4e-22  Score=175.51  Aligned_cols=215  Identities=12%  Similarity=0.117  Sum_probs=154.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+.......  ..++.++.+|+++.+..            
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEG-ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 9999999864322222222221  24688899999997432            


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||......     ..+++...+++|+.++.++++++...   +.++|++||...+..               
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------  189 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEG---------------  189 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHC---------------
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCC---------------
Confidence            5999999999754321     33567789999999999999998764   238999999887632               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ......|+.+|...+.+.+.++.+.   ++++.+++||.++++....   ..-........         .......+.
T Consensus       190 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~---------~~~p~~r~~  256 (291)
T 3ijr_A          190 -NETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS---SFDEKKVSQFG---------SNVPMQRPG  256 (291)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH---HSCHHHHHHTT---------TTSTTSSCB
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc---cCCHHHHHHHH---------ccCCCCCCc
Confidence             2233579999999999999988775   7999999999999873110   00011111111         111223577


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      +++|+|++++.++....    +..+++.+|..+
T Consensus       257 ~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          257 QPYELAPAYVYLASSDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             CGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCC
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCCccc
Confidence            89999999999986542    457888776543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.89  E-value=4.5e-22  Score=169.83  Aligned_cols=210  Identities=13%  Similarity=0.082  Sum_probs=140.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhc--CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|+++ .|+. ...+...+.+  ...++.++.+|+.+.+..           
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G-~~V~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMG-ANIVLNGSPAS-TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECTTC-SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCcCH-HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999 999998 4433 2222221111  124688999999987532           


Q ss_pred             -CCCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccc-cCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEV-YGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||.....    ...+++...+++|+.++.++++++..    .+. +||++||... ++.            
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  149 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN------------  149 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------------
Confidence             699999999975432    23456778999999998888777643    454 8999999754 431            


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                           .+...|+.+|...|.+.+.++.+.   ++++++++|+.+.++....    +..........+.+         ..
T Consensus       150 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~  211 (247)
T 2hq1_A          150 -----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV----LPDKVKEMYLNNIP---------LK  211 (247)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHTTST---------TS
T ss_pred             -----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh----cchHHHHHHHhhCC---------CC
Confidence                 123579999999999999887764   7899999999988753110    01112222222211         13


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+++++|+|++++.++..+.    ++.|++.++.
T Consensus       212 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          212 RFGTPEEVANVVGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCcEEEeCCCc
Confidence            57899999999999886532    4578988764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.88  E-value=1.1e-21  Score=168.76  Aligned_cols=213  Identities=14%  Similarity=0.038  Sum_probs=150.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|..........+.+  ...++.++.+|+.+.+..            
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEK-AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999 999999983221111111111  123578899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++..    .+  .++|++||...+.              
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~--------------  150 (261)
T 1gee_A           85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------  150 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC--------------
Confidence            6999999999764321    2345667889999999888776543    33  4999999987652              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCcce
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                        +..+...|+.+|.+.|.+.+.++.+.   +++++++|||.++++...    ...  +..........+         .
T Consensus       151 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~---------~  215 (261)
T 1gee_A          151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINA----EKFADPEQRADVESMIP---------M  215 (261)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGH----HHHHSHHHHHHHHTTCT---------T
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhh----hcccChhHHHHHHhcCC---------C
Confidence              23344679999999999998887764   799999999999987521    111  122222221111         1


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+++++|+|++++.++....    +..+++.++..
T Consensus       216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcc
Confidence            257899999999999986532    44677877654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.88  E-value=4e-22  Score=171.53  Aligned_cols=215  Identities=17%  Similarity=0.089  Sum_probs=154.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.........++..  ..++.++.+|+++.+..            
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAG-ANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 9999999864332222222221  24688999999997532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++...    +. ++|++||.....               
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  152 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI---------------  152 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc---------------
Confidence            6999999999764322    23456778899999999988876553    44 999999976431               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      .+..+...|+.+|...+.+.+.++.+   .++++.+++||.++++.....    ............+.         ..+
T Consensus       153 ~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~---------~r~  219 (262)
T 3pk0_A          153 TGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN----GEEYIASMARSIPA---------GAL  219 (262)
T ss_dssp             BCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT----CHHHHHHHHTTSTT---------SSC
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc----CHHHHHHHHhcCCC---------CCC
Confidence            01223357999999999999998887   589999999999998742211    12223333322221         246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..++|+|++++.++....    +..+++.+|..+
T Consensus       220 ~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          220 GTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             cCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            789999999999987543    557888887654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.88  E-value=4.4e-22  Score=172.35  Aligned_cols=215  Identities=16%  Similarity=0.092  Sum_probs=144.0

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC----------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~----------   96 (346)
                      +..+++||||||+|+||++++++|+++| +.|+++.+......+.....+  ...++.++.+|+++.+..          
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  101 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQG-WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ  101 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3446799999999999999999999999 999877442222222222111  124688999999987433          


Q ss_pred             --CCCEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHHHHc--------CCeEEEEecccccCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAKRV--------GARILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 --~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~r~i~~SS~~v~~~~~~~~~~e  161 (346)
                        ++|+|||+||.... ..    ..+++...+++|+.++..+++++...        +.+||++||...+..        
T Consensus       102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  173 (272)
T 4e3z_A          102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILG--------  173 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHC--------
T ss_pred             CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccC--------
Confidence              69999999997643 11    33456788999999999998877543        238999999876531        


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                             .......|+.+|.+.|.+.+.++.+.   ++++++++||.+.++....   .............         
T Consensus       174 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~~~~~~~~~---------  234 (272)
T 4e3z_A          174 -------SATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS---GGLPDRAREMAPS---------  234 (272)
T ss_dssp             -------CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------C---------
T ss_pred             -------CCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc---cCChHHHHHHhhc---------
Confidence                   11123469999999999999888765   7999999999999875321   1111111111111         


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .....+.+++|+|++++.++....    ++.+++.+|
T Consensus       235 ~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          235 VPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            122346789999999999986542    457888775

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.88  E-value=8.1e-22  Score=168.45  Aligned_cols=211  Identities=13%  Similarity=0.033  Sum_probs=145.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi  102 (346)
                      .+++||||||+|+||++++++|+++| +.|++++|+..... .+.+.+ ...+.++.+|+.+.+.        .++|+||
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLK-SLGNAL-KDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHH-CSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHH-HHHHHh-ccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            47899999999999999999999999 99999998542211 111222 2468889999998643        2699999


Q ss_pred             EcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060          103 HLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      |+||.....    ...+++...+++|+.++.++++++.    +.+. ++|++||...+.                +..+.
T Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~  153 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA----------------GNPGQ  153 (249)
T ss_dssp             ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------------------CCSCS
T ss_pred             ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc----------------CCCCC
Confidence            999976532    2446778999999999999888763    3344 899999987763                22334


Q ss_pred             CchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      ..|+.+|.+.+.+.+.++.+   .++++.+++||.+.++.....    ..........+.         ....+.+++|+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~---------~~~~~~~~~dv  220 (249)
T 3f9i_A          154 ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL----NEKQREAIVQKI---------PLGTYGIPEDV  220 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C----CHHHHHHHHHHC---------TTCSCBCHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc----CHHHHHHHHhcC---------CCCCCcCHHHH
Confidence            67999999999999988776   478999999999988753221    122222222111         12357789999


Q ss_pred             HHHHHHHHhCCC----CCcEEecCCCC
Q 019060          251 VDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       251 a~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      |++++.++....    ++.+++.+|..
T Consensus       221 a~~~~~l~s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          221 AYAVAFLASNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHcCCccCCccCcEEEECCCEe
Confidence            999999997543    55788887654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.88  E-value=1.1e-21  Score=168.37  Aligned_cols=209  Identities=14%  Similarity=0.070  Sum_probs=148.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+.+.    ..++.++.+|+.+.+..            ++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHG-HRVIISYRTEHASVTELR----QAGAVALYGDFSCETGIMAFIDLLKTQTSSL  100 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESSCCHHHHHHH----HHTCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHH----hcCCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 999999996533222221    12478899999997432            69


Q ss_pred             CEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+|||+||......   ..++....+++|+.++..+++++..    .+ .++|++||...+.                +.
T Consensus       101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~  164 (260)
T 3gem_A          101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRK----------------GS  164 (260)
T ss_dssp             SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGT----------------CC
T ss_pred             CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC----------------CC
Confidence            99999999754332   2234567889999999999887743    34 3899999988763                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      .+...|+.+|...+.+.+.++.+.  ++++.+++||.+..+...      ............+         ...+..++
T Consensus       165 ~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~------~~~~~~~~~~~~p---------~~r~~~~e  229 (260)
T 3gem_A          165 SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD------DAAYRANALAKSA---------LGIEPGAE  229 (260)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC---------------------CC---------SCCCCCTH
T ss_pred             CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC------CHHHHHHHHhcCC---------CCCCCCHH
Confidence            334679999999999999988775  489999999999876421      0111111111111         12355789


Q ss_pred             HHHHHHHHHHhCCC--CCcEEecCCCCCC
Q 019060          249 DMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (346)
Q Consensus       249 Dva~~i~~~~~~~~--~~~~~~~~~~~~s  275 (346)
                      |+|++++.+++...  +..+++.+|..++
T Consensus       230 dva~~v~~L~~~~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          230 VIYQSLRYLLDSTYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             HHHHHHHHHHHCSSCCSCEEEESTTTTTC
T ss_pred             HHHHHHHHHhhCCCCCCCEEEECCCcccC
Confidence            99999999986544  5578998887664

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.88  E-value=3.6e-22  Score=171.81  Aligned_cols=217  Identities=13%  Similarity=0.039  Sum_probs=155.2

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|++|||||+  |+||++++++|+++| ++|++++|+.. ..+...+... ...+.++.+|+++.+..           
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAG-AEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHT-CEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46899999999  999999999999999 99999998642 1112222211 12478899999987432           


Q ss_pred             -CCCEEEEcccCCCc--------cccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|+|||+||....        ....+++...+++|+.++.++++++...   +.++|++||...+.            
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  152 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK------------  152 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC------------
Confidence             58999999997542        1233456788999999999999998765   34899999987652            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++.....  ..............++         
T Consensus       153 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~p~---------  217 (261)
T 2wyu_A          153 ----VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI--PGFTKMYDRVAQTAPL---------  217 (261)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC--TTHHHHHHHHHHHSTT---------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc--cccHHHHHHHHhcCCC---------
Confidence                12233569999999999999888765   89999999999998753211  1112222222222111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      ..+.+++|+|++++.++....    +..+++.++..++.
T Consensus       218 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  256 (261)
T 2wyu_A          218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIMG  256 (261)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCccccC
Confidence            236789999999999986432    45788888765543

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.88  E-value=2.2e-21  Score=167.37  Aligned_cols=213  Identities=15%  Similarity=0.151  Sum_probs=151.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+.....+.... + ..++.++.+|+.+.+..            ++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   87 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQG-ASAVLLDLPNSGGEAQAKK-L-GNNCVFAPADVTSEKDVQTALALAKGKFGRV   87 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSSHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCcHhHHHHHHH-h-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999 9999999975433222222 2 24688999999987432            69


Q ss_pred             CEEEEcccCCCcc----------ccccChHHHHHHHHHHHHHHHHHHHHc----------CC-eEEEEecccccCCCCCC
Q 019060           99 DQIYHLACPASPI----------FYKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLVH  157 (346)
Q Consensus        99 d~vi~~a~~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~i~~SS~~v~~~~~~~  157 (346)
                      |+|||+||.....          ...+++...+++|+.++.++++++...          +. ++|++||...+.     
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~-----  162 (265)
T 2o23_A           88 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-----  162 (265)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             CEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC-----
Confidence            9999999975432          123456778899999999999887654          44 899999988763     


Q ss_pred             CCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEE
Q 019060          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (346)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
                                 +..+...|+.+|...+.+.+.++.+   .++++++++||.+.++....    .............+.  
T Consensus       163 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~--  225 (265)
T 2o23_A          163 -----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS----LPEKVCNFLASQVPF--  225 (265)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSS--
T ss_pred             -----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc----cCHHHHHHHHHcCCC--
Confidence                       2223457999999999999888776   37899999999998874221    001111111111111  


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEF  274 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~  274 (346)
                            ...+++++|+|++++.+++...  +..+++.++..+
T Consensus       226 ------~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG~~~  261 (265)
T 2o23_A          226 ------PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRM  261 (265)
T ss_dssp             ------SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred             ------cCCCCCHHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence                  0247799999999999987654  457888776543

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.88  E-value=3.2e-22  Score=171.55  Aligned_cols=217  Identities=14%  Similarity=0.111  Sum_probs=156.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+............ ...++.++.+|+++.+..            +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999986432222111111 124688899999997432            6


Q ss_pred             CCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++||+||......   ..+++...+++|+.++..+++++.    +.+. ++|++||...+.                +
T Consensus        90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  153 (256)
T 3gaf_A           90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN----------------T  153 (256)
T ss_dssp             CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTC----------------C
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcC----------------C
Confidence            999999999765422   334567789999999999998863    3444 899999988753                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+....   ...+..........+         ...+.+
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~p---------~~r~~~  221 (256)
T 3gaf_A          154 NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT---VLTPEIERAMLKHTP---------LGRLGE  221 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH---HCCHHHHHHHHTTCT---------TSSCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh---ccCHHHHHHHHhcCC---------CCCCCC
Confidence            2334679999999999999888774   7899999999998763110   000122222222221         135778


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      ++|+|++++.++....    +..+++.+|...++
T Consensus       222 ~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~  255 (256)
T 3gaf_A          222 AQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL  255 (256)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred             HHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence            9999999999987532    56889988877654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.88  E-value=3.9e-22  Score=171.31  Aligned_cols=213  Identities=11%  Similarity=0.044  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+.....+.....+  ...++.++.+|+.+.+..            
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAG-AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999999997222222221111  124688999999987532            


Q ss_pred             CCCEEEEcccC-CCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC------CeEEEEecccccCCCCCCCCCC
Q 019060           97 EVDQIYHLACP-ASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG------ARILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 ~~d~vi~~a~~-~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~------~r~i~~SS~~v~~~~~~~~~~e  161 (346)
                      ++|+|||+||. .....    ..++....+++|+.++..+++++..    .+      .++|++||...+..        
T Consensus        85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------  156 (258)
T 3afn_B           85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG--------  156 (258)
T ss_dssp             SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC--------
T ss_pred             CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC--------
Confidence            69999999986 32211    2234567889999999988876532    22      48999999876531        


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                             +..+...|+.+|...|.+.+.++.+.   +++++++||+.++++.....    ...+......+.+       
T Consensus       157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~-------  218 (258)
T 3afn_B          157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK----TQDVRDRISNGIP-------  218 (258)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC----CHHHHHHHHTTCT-------
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc----CHHHHHHHhccCC-------
Confidence                   12234579999999999999887764   79999999999999853321    1233333333322       


Q ss_pred             cceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPG  272 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~  272 (346)
                        ...+++++|+|++++.++..+    . ++.|++.++.
T Consensus       219 --~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          219 --MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             --TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             --CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence              135889999999999988653    1 4478887764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.88  E-value=1.3e-21  Score=167.80  Aligned_cols=216  Identities=16%  Similarity=0.123  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+...  ....+.+.  . .++.+|+++.+..            ++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~--~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREG-ALVALCDLRPEG--KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTH--HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChhH--HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 999999997543  22222222  3 7889999986432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++.++++++..    .+. ++|++||...+.                +
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  142 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------A  142 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------B
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC----------------C
Confidence            99999999764322    2234577889999999999887643    344 899999987652                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHH-cCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI-RGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v  245 (346)
                      ..+...|+.+|...|.+.+.++.+.   ++++++++||.+.++.        ....+.... ................++
T Consensus       143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (256)
T 2d1y_A          143 EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA--------VLEAIALSPDPERTRRDWEDLHALRRLG  214 (256)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------HHHHHC--------CHHHHTTSTTSSCB
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch--------hhhccccccCCHHHHHHHHhcCCCCCCc
Confidence            1233579999999999999887764   7899999999987652        111100000 000000011111224688


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      +++|+|++++.++..+.    +..+++.+|..+++
T Consensus       215 ~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~  249 (256)
T 2d1y_A          215 KPEEVAEAVLFLASEKASFITGAILPVDGGMTASF  249 (256)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CHHHHHHHHHHHhCchhcCCCCCEEEECCCccccc
Confidence            99999999999987642    44788888765543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.88  E-value=2e-22  Score=173.35  Aligned_cols=218  Identities=13%  Similarity=0.022  Sum_probs=151.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc-------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-------------~   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.........++.. ..++.++.+|+++.+.             .
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 9999999864222211111111 2367889999998632             3


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+.               
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  151 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------------  151 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc---------------
Confidence            6999999999754321    234567788999999999988873    4454 899999987653               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC-CccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       +..+...|+.+|...|.+.+.++.+.   ++++++++||.+.++..... ........+.......         ....
T Consensus       152 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  221 (260)
T 2ae2_A          152 -AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC---------ALRR  221 (260)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS---------TTCS
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC---------CCCC
Confidence             12233579999999999999988764   78999999999987631100 0000001111111111         1135


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      +.+++|+|++++.++..+.    +..+++.+|..+
T Consensus       222 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          222 MGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            7899999999999886532    456888776543

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.88  E-value=1.1e-21  Score=168.64  Aligned_cols=206  Identities=16%  Similarity=0.087  Sum_probs=148.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+...... ....+. ..+.++.+|+++.+..            ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEG-AKVVFGDILDEEGKA-MAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986422111 111111 2478899999986432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++..+.++    +++.+. ++|++||...+..                
T Consensus        83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  146 (260)
T 1nff_A           83 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG----------------  146 (260)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCC----------------
Confidence            99999999764322    2345677889999999666554    445555 8999999987632                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...|.+.+.++.+   .+++++++|||.++++....  .            ...+.    ......+.+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~------------~~~~~----~~~~~~~~~  208 (260)
T 1nff_A          147 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--V------------PEDIF----QTALGRAAE  208 (260)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--S------------CTTCS----CCSSSSCBC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--c------------hhhHH----hCccCCCCC
Confidence            123357999999999999988776   48999999999999875220  0            00010    011135789


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++|+|++++.++..+.    +..+++.++..
T Consensus       209 ~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          209 PVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            9999999999986532    45788887754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.88  E-value=5.4e-21  Score=163.38  Aligned_cols=213  Identities=16%  Similarity=0.084  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+...     .    ..++..+.+|+++.+..            ++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~-----~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAG-AKVTGFDQAFTQ-----E----QYPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCCCS-----S----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCchhh-----h----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986431     1    11378889999986432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++.++++++    ++.+ .++|++||...+.                +
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  139 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT----------------P  139 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----------------C
Confidence            99999999754322    23456788999999999998877    4444 4999999988763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHH-HHHcCCCeEEecCCcceeecc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIA-QAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ..+...|+.+|...|.+.+.++.+.   ++++++++||.++++.......  ...... ....-  ............+.
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~p~~~~~  215 (250)
T 2fwm_X          140 RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SDDAEEQRIRGF--GEQFKLGIPLGKIA  215 (250)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--ChhHHHHHHhhh--hhcccccCCCCCCc
Confidence            2334679999999999999887764   8999999999999875321000  000000 00000  00000001112478


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++|+|++++.++..+.    +..+++.+|..
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          216 RPQEIANTILFLASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            99999999999987542    45677777654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.88  E-value=3.6e-22  Score=173.02  Aligned_cols=218  Identities=17%  Similarity=0.050  Sum_probs=152.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ..++++|||||+|+||++++++|+++| ++|++++|+.....+...+ + ..++.++.+|+++.+..            +
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEG-CHVLCADIDGDAADAAATK-I-GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-H-CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-c-CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            346899999999999999999999999 9999999864322222222 2 34688999999997532            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+.                
T Consensus       104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------------  167 (277)
T 3gvc_A          104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV----------------  167 (277)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc----------------
Confidence            999999999765422    3345678899999999998887643    343 899999987653                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC---Cccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP---GTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  242 (346)
                      +..+...|+.+|...+.+.+.++.+   .++++.+++||.++++..        ...... ..+........   .....
T Consensus       168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ--------QTAMAM-FDGALGAGGARSMIARLQG  238 (277)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH--------HHHHTC-C------CCHHHHHHHHHS
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH--------HHhhhc-chhhHHHHhhhhhhhcccc
Confidence            2233467999999999999988776   479999999999987631        111000 00000000000   01113


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .+.+++|+|++++.++....    +..+++.+|...+
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            57889999999999986542    5578888775543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.88  E-value=1.4e-21  Score=168.18  Aligned_cols=218  Identities=12%  Similarity=0.068  Sum_probs=145.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+ +...+ ...+.++.+|+++.+..            ++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   84 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGG-AKVVIVDRDKAGAER-VAGEI-GDAALAVAADISKEADVDAAVEAALSKFGKV   84 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCHHHHHH-HHHHh-CCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 999999986432222 11212 24688999999987532            69


Q ss_pred             CEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHHHHc---------CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           99 DQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAKRV---------GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        99 d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      |++||+||.... ..    ..++....+++|+.++.++++++...         +.++|++||...+.            
T Consensus        85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------------  152 (261)
T 3n74_A           85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR------------  152 (261)
T ss_dssp             CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS------------
T ss_pred             CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC------------
Confidence            999999997542 11    23456778899999988888776332         22699999987652            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|.+.+.+.+.++.+   .++++.+++||.+..+................         .......
T Consensus       153 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~  219 (261)
T 3n74_A          153 ----PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKK---------FRDSIPM  219 (261)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------------CTT
T ss_pred             ----CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHH---------HhhcCCc
Confidence                2233456999999999999998877   47899999999998875321100000011111         1111122


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      ..+++++|+|++++.++....    +..+++.+|..++-
T Consensus       220 ~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~  258 (261)
T 3n74_A          220 GRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG  258 (261)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence            368899999999999886432    55788888877654

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.88  E-value=2.8e-21  Score=166.80  Aligned_cols=212  Identities=15%  Similarity=0.070  Sum_probs=153.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|......+.....+  ...++.++.+|+++.+..            
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAG-AKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999998884322222222211  124688899999997542            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++    ++.+ .++|++||...+.               
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  170 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM---------------  170 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcC---------------
Confidence            6999999999765332    23456788999999999998876    3334 3999999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +......|+.+|...+.+.+.++.+   .++++.+++||.+..+...    ....   .......+         ...+
T Consensus       171 -~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~----~~~~---~~~~~~~p---------~~r~  233 (269)
T 4dmm_A          171 -GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS----ELAA---EKLLEVIP---------LGRY  233 (269)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC----HHHH---HHHGGGCT---------TSSC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc----cccH---HHHHhcCC---------CCCC
Confidence             1223357999999999999988876   4799999999999987522    1111   22222111         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC-----CCcEEecCCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN-----TGPINIGNPGEFT  275 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~-----~~~~~~~~~~~~s  275 (346)
                      ..++|+|++++.++..+.     +..+++.+|..++
T Consensus       234 ~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          234 GEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             BCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred             CCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeecC
Confidence            789999999999998632     5578888876543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.88  E-value=1.9e-21  Score=165.92  Aligned_cols=214  Identities=11%  Similarity=-0.011  Sum_probs=153.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+............ ...++.++.+|+++.+..            +
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999986432221111111 124688999999987432            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..+++...+++|+.++.++++++..    .+. ++|++||...+.                
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  146 (247)
T 3lyl_A           83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSA----------------  146 (247)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcc----------------
Confidence            899999999765422    3345678899999999998887643    343 899999987653                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+   .++++.+++||.+..+.....    ............         ....+.
T Consensus       147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~---------~~~~~~  213 (247)
T 3lyl_A          147 GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL----TDEQKSFIATKI---------PSGQIG  213 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS----CHHHHHHHHTTS---------TTCCCB
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc----cHHHHHHHhhcC---------CCCCCc
Confidence            2223467999999999999988876   378999999999998754321    122222222111         123578


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      +++|+|++++.++....    ++.+++.+|..+
T Consensus       214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          214 EPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            99999999999986542    557888877654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.88  E-value=4.1e-22  Score=169.85  Aligned_cols=211  Identities=10%  Similarity=0.030  Sum_probs=144.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhc-CCCCeeE-EecccCCccc------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWI-GHPRFEL-IRHDVTEPLL------------I   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~-~~~d~~~~~~------------~   96 (346)
                      +|+||||||+|+||++++++|+++| ++|+++ +|+............ ...++.. +.+|+.+.+.            .
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G-~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDG-FALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 999988 674322111111111 1234556 8999998643            2


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHH----HHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNML----GLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.+++    ..+++.+. +||++||...+..              
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  145 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILG--------------  145 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccC--------------
Confidence            6999999999764321    23456778899999955554    45555665 9999999865421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...|.+.+.++.+.   +++++++||+.++++....    .............+         ...+
T Consensus       146 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~~  210 (245)
T 2ph3_A          146 --NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER----LPQEVKEAYLKQIP---------AGRF  210 (245)
T ss_dssp             --CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHHTCT---------TCSC
T ss_pred             --CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh----cCHHHHHHHHhcCC---------CCCC
Confidence              1123579999999999999887765   7999999999999874221    11122222222211         1357


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++++|+|++++.++..+.    ++.|++.++.
T Consensus       211 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          211 GRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            899999999999987542    4567777653

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.88  E-value=1.1e-21  Score=168.74  Aligned_cols=215  Identities=14%  Similarity=0.027  Sum_probs=152.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.........++. ...++.++.+|+.+.+..            +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDG-AHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999 999999986422211111111 123578899999986432            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||.... .    ...+++...+++|+.++.++++++.    +.+. ++|++||...+.               
T Consensus        92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  156 (260)
T 2zat_A           92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH---------------  156 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcC---------------
Confidence            9999999996431 1    1234467788999999988888764    4454 899999998774               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +..+...|+.+|...+.+.+.++.+.   ++++++++||.+.++...    ...  ..........         ....
T Consensus       157 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~---------~~~~  222 (260)
T 2zat_A          157 -PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ----VLWMDKARKEYMKES---------LRIR  222 (260)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTH----HHHSSHHHHHHHHHH---------HTCS
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccch----hcccChHHHHHHHhc---------CCCC
Confidence             22334679999999999999887764   789999999999887421    000  0000111100         1123


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .+.+++|+|++++.++..+.    +..+++.+|...+
T Consensus       223 ~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          223 RLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             SCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            57899999999999887542    4579999887765

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.88  E-value=1.2e-21  Score=170.77  Aligned_cols=212  Identities=13%  Similarity=0.018  Sum_probs=147.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------IE   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------~~   97 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+............. ..++.++.+|+++.+.            .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSV-SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcC-CEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999 9999988753221111111111 2367889999998643            25


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..+++...+++|+.++.++++++.    +.+. +||++||...+..               
T Consensus       122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  186 (285)
T 2c07_A          122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG---------------  186 (285)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC---------------
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccC---------------
Confidence            999999999764321    234567788999999877777664    4454 8999999876531               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ..+...|+.+|...|.+.+.++.+.   ++++++++||.+.++....    .............+         ...++
T Consensus       187 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~~~  252 (285)
T 2c07_A          187 -NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK----ISEQIKKNIISNIP---------AGRMG  252 (285)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------CCHHHHHHHHTTCT---------TSSCB
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh----cCHHHHHHHHhhCC---------CCCCC
Confidence             1223579999999999999887764   7999999999999875321    11222222222111         12478


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++|+|++++.++..+.    +..+++.+|.
T Consensus       253 ~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          253 TPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            99999999999987532    4467777764

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.87  E-value=2e-21  Score=166.67  Aligned_cols=215  Identities=15%  Similarity=0.088  Sum_probs=152.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|+++ .|+.....+....... ..++.++.+|+++.+..            
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G-~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENG-YNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 998886 6643221111111111 24688999999997542            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.               
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---------------  146 (258)
T 3oid_A           82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR---------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCC---------------
Confidence            5899999999654322    23456678899999999998877    33444 899999987653               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+.......  ............++         ..+
T Consensus       147 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------~r~  214 (258)
T 3oid_A          147 -YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN--REDLLEDARQNTPA---------GRM  214 (258)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT--HHHHHHHHHHHCTT---------SSC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc--CHHHHHHHHhcCCC---------CCC
Confidence             23334679999999999999988774   7899999999998875322111  11222222222211         247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .+++|+|++++.++....    +..+++.+|..
T Consensus       215 ~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             BCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCcccCCccCCEEEECCCcc
Confidence            789999999999987643    55788887754

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.87  E-value=1.7e-21  Score=168.51  Aligned_cols=215  Identities=13%  Similarity=0.026  Sum_probs=153.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------~~   98 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|.. ...+...++.. ...+.++.+|+++.+..           ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAG-AHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 9999998742 11111222211 24678899999987532           69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                +
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------------~  171 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ----------------G  171 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcC----------------C
Confidence            99999999765433    23456788999999999998876    34454 899999988763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+   .++++.+++||.++++.......  ............+.         ..+..
T Consensus       172 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------~r~~~  240 (273)
T 3uf0_A          172 GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA--DDERAAEITARIPA---------GRWAT  240 (273)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--SHHHHHHHHHHSTT---------SSCBC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc--CHHHHHHHHhcCCC---------CCCCC
Confidence            233467999999999999998877   57999999999999874210000  01122222222111         24678


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ++|+|++++.++....    +..+++.+|..+
T Consensus       241 pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             GGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            9999999999987532    557888877544

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.87  E-value=4.5e-22  Score=173.14  Aligned_cols=225  Identities=17%  Similarity=0.123  Sum_probs=155.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--------cchhhhh---c--CCCCeeEEecccCCcccC-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRKW---I--GHPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--------~~~~~~~---~--~~~~~~~~~~d~~~~~~~-   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+....        .+.+.+.   .  ...++.++.+|+++.+.. 
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAG-ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            36899999999999999999999999 9999999863211        1111111   1  124688999999997432 


Q ss_pred             -----------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCC
Q 019060           97 -----------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLV  156 (346)
Q Consensus        97 -----------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~  156 (346)
                                 ++|++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.    
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  163 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS----  163 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC----
Confidence                       6999999999765322    33456788899999999999885    33444 899999988763    


Q ss_pred             CCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe-
Q 019060          157 HPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL-  232 (346)
Q Consensus       157 ~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-  232 (346)
                                  +..+...|+.+|...+.+.+.++.+   .++++.+++||.++++....   ......+......... 
T Consensus       164 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~  228 (281)
T 3s55_A          164 ------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN---DFVFGTMRPDLEKPTLK  228 (281)
T ss_dssp             ------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS---HHHHHC-------CCHH
T ss_pred             ------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc---hhhhccccccccccchh
Confidence                        2233467999999999999998886   47999999999999986431   0000000000000000 


Q ss_pred             ----EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          233 ----TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       233 ----~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                          ...........+.+++|+|++++.++....    +..+++.+|..++
T Consensus       229 ~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          229 DVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             HHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence                000001112468899999999999997643    5578888876543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.87  E-value=1.5e-21  Score=167.17  Aligned_cols=220  Identities=15%  Similarity=0.133  Sum_probs=158.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+ +.+.+ ..++.++.+|+++.+..            ++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGG-AEVLLTGRNESNIAR-IREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999 999999985422211 11112 24688999999997532            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++||+||......    ..+++...+++|+.++..+++++...   +.++|++||...+.                +..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  147 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG----------------GHP  147 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS----------------BCT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC----------------CCC
Confidence            99999999765433    33456788999999999999998764   23899999988763                223


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-c-cHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-G-RVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      +...|+.+|...+.+.+.++.+.   ++++.+++||.+..+...... . .....+........++         ..+.+
T Consensus       148 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~  218 (255)
T 4eso_A          148 GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM---------KRNGT  218 (255)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT---------SSCBC
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC---------CCCcC
Confidence            34679999999999999988774   799999999999988543211 1 1111222222211111         24668


Q ss_pred             HHHHHHHHHHHHhCCC---CCcEEecCCCCCCHHH
Q 019060          247 VSDMVDGLIRLMEGEN---TGPINIGNPGEFTMLE  278 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~~~~~~~~~~~s~~e  278 (346)
                      ++|+|++++.++....   +..+++.+|...++.+
T Consensus       219 pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~  253 (255)
T 4eso_A          219 ADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST  253 (255)
T ss_dssp             HHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred             HHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence            9999999999887532   5578888887766544

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.87  E-value=2.4e-21  Score=165.91  Aligned_cols=211  Identities=16%  Similarity=0.124  Sum_probs=146.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+ ..+.+ ..++.++.+|+++.+..            ++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAA-TAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999985422111 11111 13578899999987432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHH----HHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNM----LGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++..+    +..+++.+. ++|++||...+..                
T Consensus        81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  144 (254)
T 1hdc_A           81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG----------------  144 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC----------------
Confidence            99999999754322    2345677889999988754    445555555 9999999887632                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc-
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC-  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-  245 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++++++||.++++.        ...    .. ...............+. 
T Consensus       145 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~--------~~~----~~-~~~~~~~~~~~p~~~~~~  211 (254)
T 1hdc_A          145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM--------TAE----TG-IRQGEGNYPNTPMGRVGN  211 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------HHH----HT-CCCSTTSCTTSTTSSCB-
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc--------ccc----cc-hhHHHHHHhcCCCCCCCC
Confidence            2233579999999999999887763   7899999999998763        111    10 00000000111112467 


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++|+|++++.++..+.    +..+++.++..
T Consensus       212 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence            99999999999987542    44677777643

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.87  E-value=2.4e-21  Score=164.96  Aligned_cols=204  Identities=14%  Similarity=0.070  Sum_probs=147.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-------eEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-------EVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-------~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-------   96 (346)
                      +|+||||||+|+||++++++|+++| +       .|++++|+............. ..++.++.+|+.+.+..       
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G-~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAA-RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHT-TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhc-CcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            5789999999999999999999999 7       899999853221111111111 24688899999987432       


Q ss_pred             -----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCC
Q 019060           97 -----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                           ++|+|||+||......    ..++....+++|+.++.++++++.    +.+. ++|++||...+.          
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  150 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK----------  150 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcC----------
Confidence                 5999999999764322    234567788999999999988774    3344 999999998764          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +..+...|+.+|...|.+.+.++.+   .+++++++|||.++++.......             .       . 
T Consensus       151 ------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~-------~-  203 (244)
T 2bd0_A          151 ------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------------E-------M-  203 (244)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------------T-------T-
T ss_pred             ------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------------c-------c-
Confidence                  2233467999999999999887664   47899999999999985321100             0       0 


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                       ...+++++|+|++++.++..+.    ++.+...+++.+
T Consensus       204 -~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          204 -QALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             -GGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             -cccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence             1258899999999999998665    334455554443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.87  E-value=1.8e-21  Score=169.05  Aligned_cols=226  Identities=15%  Similarity=0.086  Sum_probs=157.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--------Ccchhhhh---c--CCCCeeEEecccCCcccC-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDNLRKW---I--GHPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~~~~~~~---~--~~~~~~~~~~d~~~~~~~-   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+...        ..+.+...   +  ...++.++.+|+++.+.. 
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADG-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            46899999999999999999999999 999999986311        11111111   1  124788999999997532 


Q ss_pred             -----------CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCC
Q 019060           97 -----------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQ  159 (346)
Q Consensus        97 -----------~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~  159 (346)
                                 ++|++||+||........+++...+++|+.++..+++++..    .+  .++|++||...+....    
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  166 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG----  166 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC----
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc----
Confidence                       69999999997765445567788999999999999987633    33  3899999987653210    


Q ss_pred             CCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHH-HcCCCeEEe
Q 019060          160 DESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IRGEPLTVQ  235 (346)
Q Consensus       160 ~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~  235 (346)
                              .+..+...|+.+|...+.+.+.++.+.   ++++.+++||.+.++...   .......+... .........
T Consensus       167 --------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~  235 (278)
T 3sx2_A          167 --------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN---NEFTREWLAKMAAATDTPGAM  235 (278)
T ss_dssp             --------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS---SHHHHHHHHHHHHHCC--CTT
T ss_pred             --------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch---hhhHHHHHhhccchhhhhhhh
Confidence                    111233569999999999999888764   689999999999998642   11222222211 112111111


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..... ..+++++|+|++++.++....    +..+++.+|..
T Consensus       236 ~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          236 GNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             hhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            22222 578899999999999986542    45788877643

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.87  E-value=1.3e-21  Score=166.70  Aligned_cols=210  Identities=13%  Similarity=0.028  Sum_probs=146.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|+||||||+|+||++++++|+++| ++|+++ .|+.... +...+.+.  ..++.++.+|+++.+..            
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G-~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAG-CKVLVNYARSAKAA-EEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHH-HHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHH-HHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999 999885 6643211 11111111  23678899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++..    .+. +||++||...+..              
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------  144 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG--------------  144 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCC--------------
Confidence            5999999999765322    2345677889999999998887754    344 9999999865421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...+.+.+.++.+   .+++++++|||.++++....    +............+         ...+
T Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~---------~~~~  209 (244)
T 1edo_A          145 --NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK----LGEDMEKKILGTIP---------LGRT  209 (244)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT----TCHHHHHHHHTSCT---------TCSC
T ss_pred             --CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh----cChHHHHHHhhcCC---------CCCC
Confidence              122357999999999999888776   37899999999999864211    11122222222111         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC-----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN-----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~-----~~~~~~~~~~  272 (346)
                      ++++|+|++++.++..+.     +..+++.++.
T Consensus       210 ~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          210 GQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             BCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             CCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence            899999999999884332     4568887764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.87  E-value=2.5e-21  Score=166.16  Aligned_cols=218  Identities=9%  Similarity=0.000  Sum_probs=152.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+....... ..++.++.+|+++.+..            +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 9999999864322222222211 23688899999997432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH-----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA-----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~-----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||......    ..+++...+++|+.++..+.+++     ++.+ .++|++||...+.               
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  148 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWD---------------  148 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGS---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhcc---------------
Confidence            999999999654322    23456788999999999998887     3332 4899999987763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       +......|+.+|...+.+.+.++.+    .++++++++||.+.++...... .....+........         ....
T Consensus       149 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~---------p~~r  217 (257)
T 3imf_A          149 -AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WISEEMAKRTIQSV---------PLGR  217 (257)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTS---------TTCS
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc-ccCHHHHHHHHhcC---------CCCC
Confidence             2223457999999999998887643    4899999999999987532110 00011111111111         1135


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +..++|+|++++.++....    +..+++.+|..++
T Consensus       218 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          218 LGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred             CcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence            7799999999999987543    5578888876654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.87  E-value=3e-21  Score=166.61  Aligned_cols=213  Identities=14%  Similarity=0.073  Sum_probs=149.1

Q ss_pred             CCCEEEEEcCch-hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG-FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG-~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+| .||++++++|+++| +.|++++|+..........+..  ..++.++.+|+++.+..           
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEG-ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            468999999998 59999999999999 9999999864332222222211  24789999999997542           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----GA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||......    ..++....+++|+.++.++++++...     +. ++|++||...+.             
T Consensus       100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------  166 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR-------------  166 (266)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-------------
T ss_pred             CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-------------
Confidence             5899999999765432    23456778899999999998877543     33 899999987652             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                         +..+...|+.+|.+.+.+.+.++.+   .++++.+++||.+..+.....   .........         .......
T Consensus       167 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~---------~~~~~~~  231 (266)
T 3o38_A          167 ---AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT---SSSELLDRL---------ASDEAFG  231 (266)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------------CCTTS
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc---CcHHHHHHH---------HhcCCcC
Confidence               2334467999999999999988876   578999999999987642210   001111111         1112234


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+.+++|+|++++.++....    ++.+++.+|.
T Consensus       232 r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          232 RAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             CCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            57899999999999987532    4567777653

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=3.4e-21  Score=164.54  Aligned_cols=204  Identities=12%  Similarity=0.015  Sum_probs=142.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------------   96 (346)
                      +|+||||||+|+||++++++|+++|. +.|++++|+.... +.+... ...++.++.+|+++.+..              
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~-~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-TELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-HHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHH-HHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999985 7899999864332 222222 234788999999986432              


Q ss_pred             CCCEEEEcccCCC-cc----ccccChHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEecccccCCCC
Q 019060           97 EVDQIYHLACPAS-PI----FYKYNPVKTIKTNVIGTLNMLGLAKRV----------------GARILLTSTSEVYGDPL  155 (346)
Q Consensus        97 ~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~r~i~~SS~~v~~~~~  155 (346)
                      ++|+|||+||... ..    ...++....+++|+.++.++++++...                ..+||++||...+....
T Consensus        81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            6999999999765 21    123456778899999999988876432                34999999987654321


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
                      .    +.     ++..+...|+.+|...|.+++.++.+.   ++++++++||.+.++...    .               
T Consensus       161 ~----~~-----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~---------------  212 (250)
T 1yo6_A          161 T----SG-----SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----K---------------  212 (250)
T ss_dssp             C----ST-----TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred             c----cc-----cccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCC----C---------------
Confidence            0    11     122445679999999999999988775   799999999998776311    0               


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC---CCcEEecCCCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEF  274 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~  274 (346)
                               ..+++.+|+|+.++.++....   .|.|...++..+
T Consensus       213 ---------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          213 ---------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             ---------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             ---------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCC
Confidence                     135788999999999998764   566665554433

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=4.4e-21  Score=163.55  Aligned_cols=209  Identities=16%  Similarity=0.091  Sum_probs=148.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi  102 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..    .........++.++.+|+++.+.        .++|+||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREG-AKVIATDINES----KLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHH----HHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHH----HHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            36899999999999999999999999 99999998532    22221122368889999998743        2699999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      |+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+..               ...+.
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~~~~~  144 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVK---------------GVVNR  144 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB---------------CCTTB
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcC---------------CCCCC
Confidence            9999765332    224566788999999999888764    3344 9999999876531               11134


Q ss_pred             CchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH------HHHHHHHHcCCCeEEecCCcceeec
Q 019060          174 SCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV------SNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ..|+.+|...|.+.+.++.+.   +++++++|||.++++...    ..+      ...........+         ...+
T Consensus       145 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~---------~~~~  211 (246)
T 2ag5_A          145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ----ERIQARGNPEEARNDFLKRQK---------TGRF  211 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHH----HHHHHSSSHHHHHHHHHHTCT---------TSSC
T ss_pred             ccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchh----hhhhcccCcHHHHHHHHhcCC---------CCCC
Confidence            579999999999999888764   899999999999987411    001      111122221111         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+++|+|++++.++..+.    +..+++.+|.
T Consensus       212 ~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          212 ATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             EEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            789999999999986532    4467777653

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.87  E-value=1e-20  Score=162.99  Aligned_cols=200  Identities=12%  Similarity=0.098  Sum_probs=145.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++++|||||+|+||++++++|+++| ++|++++|+.    +.+... ....+.++.+|+++.+..            +
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~----~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEG-HPLLLLARRV----ERLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCH----HHHHTT-CCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCH----HHHHHh-hcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            356899999999999999999999999 9999999853    222222 234788999999997432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.                
T Consensus        88 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~----------------  151 (266)
T 3p19_A           88 ADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKK----------------  151 (266)
T ss_dssp             EEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCC----------------
Confidence            999999999764332    23455678899999999977765    34444 999999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...+.+.+.++.+   .++++++++||.+..+..................    .       ....++
T Consensus       152 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----~-------~~~r~~  220 (266)
T 3p19_A          152 TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWR----V-------DMGGVL  220 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHH----H-------HTTCCB
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhc----c-------cccCCC
Confidence            2233457999999999999988876   4799999999999987533221111111111100    0       112478


Q ss_pred             cHHHHHHHHHHHHhCCC
Q 019060          246 YVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~  262 (346)
                      +++|+|++++.++..+.
T Consensus       221 ~pedvA~av~~l~~~~~  237 (266)
T 3p19_A          221 AADDVARAVLFAYQQPQ  237 (266)
T ss_dssp             CHHHHHHHHHHHHHSCT
T ss_pred             CHHHHHHHHHHHHcCCC
Confidence            89999999999998876

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.87  E-value=1.6e-21  Score=167.63  Aligned_cols=216  Identities=9%  Similarity=0.006  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.............   ..++.++.+|+++.+..           
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNG-ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 9999999854221111111110   12688899999987432           


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+..              
T Consensus        85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  150 (260)
T 2z1n_A           85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRP--------------  150 (260)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCC--------------
Confidence            4999999999654322    23456778899999997766654    44554 8999999987632              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc------cHHHHH-HHHHHcCCCeEEecC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG------RVVSNF-IAQAIRGEPLTVQAP  237 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~  237 (346)
                        ..+...|+.+|...+.+.+.++.+.   ++++++++||.++++.......      ...... ...      +   ..
T Consensus       151 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~---~~  219 (260)
T 2z1n_A          151 --WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKS------M---AS  219 (260)
T ss_dssp             --CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------------
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHH------H---Hh
Confidence              2234579999999999999887764   7999999999999885321000      000000 000      0   00


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ......+.+++|+|++++.++..+.    +..+++.+|.
T Consensus       220 ~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          220 RIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            0111247799999999999987532    4467777653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.87  E-value=5.2e-21  Score=165.99  Aligned_cols=210  Identities=15%  Similarity=0.085  Sum_probs=149.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC-CCCCCcchhhhhcC---CCCeeEEecccCCc----ccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN-YFTGSKDNLRKWIG---HPRFELIRHDVTEP----LLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r-~~~~~~~~~~~~~~---~~~~~~~~~d~~~~----~~~------   96 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++| +.... +.....+.   ..++.++.+|+++.    +..      
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQG-FRVVVHYRHSEGAA-QRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCChHHH-HHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            36799999999999999999999999 99999998 43211 11111110   24688999999998    432      


Q ss_pred             ------CCCEEEEcccCCCccc----cc-----------cChHHHHHHHHHHHHHHHHHHHHc---C-------CeEEEE
Q 019060           97 ------EVDQIYHLACPASPIF----YK-----------YNPVKTIKTNVIGTLNMLGLAKRV---G-------ARILLT  145 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~---~-------~r~i~~  145 (346)
                            ++|+|||+||......    ..           ++....+++|+.++.++++++...   +       .++|++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~i  167 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL  167 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEE
Confidence                  5999999999754322    11           445678999999999999988763   2       489999


Q ss_pred             ecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHH
Q 019060          146 STSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNF  222 (346)
Q Consensus       146 SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~  222 (346)
                      ||...+.                +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++ ..  ..   ...
T Consensus       168 sS~~~~~----------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~--~~---~~~  225 (276)
T 1mxh_A          168 CDAMTDL----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA--MP---QET  225 (276)
T ss_dssp             CCGGGGS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS--SC---HHH
T ss_pred             CchhhcC----------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc--CC---HHH
Confidence            9988763                22234579999999999999888764   799999999999998 21  11   222


Q ss_pred             HHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          223 IAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ........++        .+++.+++|+|++++.++....    +..+++.+|.
T Consensus       226 ~~~~~~~~p~--------~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          226 QEEYRRKVPL--------GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             HHHHHTTCTT--------TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhcCCC--------CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            2222222111        1127899999999999987532    4467777764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.87  E-value=4.3e-21  Score=165.53  Aligned_cols=213  Identities=17%  Similarity=0.086  Sum_probs=148.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..++++|||||+|+||++++++|+++| ++|++++|+..........+  .....+.++.+|+++.+..           
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999 99999998642221111111  0123578899999987432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccc-cCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEV-YGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||......    ..++....+++|+.++.++++++.    +.+. ++|++||..+ +.             
T Consensus        98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------------  164 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-------------  164 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-------------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-------------
Confidence             6999999999764322    223456788999999999888763    3443 8999999873 21             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCcc
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  240 (346)
                         +..+...|+.+|...+.+.+.++.+   .++++++++||.+..+...    ...  ...........+.        
T Consensus       165 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~p~--------  229 (267)
T 1vl8_A          165 ---TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE----AVFSDPEKLDYMLKRIPL--------  229 (267)
T ss_dssp             ---CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----HHHTCHHHHHHHHHTCTT--------
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccc----ccccChHHHHHHHhhCCC--------
Confidence               2223457999999999999988776   4899999999999877421    111  1122222222111        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                       ..+.+++|+|++++.++....    +..+.+.+|.
T Consensus       230 -~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          230 -GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             -SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence             247789999999999986532    4467776653

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.87  E-value=7.3e-22  Score=168.91  Aligned_cols=214  Identities=14%  Similarity=0.056  Sum_probs=147.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+...............++.++.+|+.+.+..            ++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEG-AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 999999986422211111221124688999999987432            49


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |+|||+||......    ..+++...+++|+.++..+.++    +++.+  .+||++||...+..               
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  148 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG---------------  148 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC---------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccC---------------
Confidence            99999999754322    2234577889999977766554    44545  38999999887642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       ..+...|+.+|...|.+.+.++.+     .+++++++|||.++++..... .   ...... .....       .....
T Consensus       149 -~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~---~~~~~~-~~~~~-------~~~~~  215 (251)
T 1zk4_A          149 -DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-P---GAEEAM-SQRTK-------TPMGH  215 (251)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-T---THHHHH-TSTTT-------CTTSS
T ss_pred             -CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-C---chhhhH-HHhhc-------CCCCC
Confidence             223357999999999999887653     478999999999998742210 0   001111 00111       11135


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++++|+|++++.++..+.    +..+++.+|..
T Consensus       216 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHcCcccccccCcEEEECCCcc
Confidence            8899999999999987542    44688877643

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.87  E-value=1.7e-21  Score=169.01  Aligned_cols=221  Identities=13%  Similarity=0.034  Sum_probs=156.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+....+.. ..++.++.+|+++.+..            +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREG-AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999 9999999864322222222211 24688899999997432            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||.... .    ...+++...+++|+.++..+++++..    .+. ++|++||...+..              
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  151 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA--------------  151 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB--------------
T ss_pred             CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC--------------
Confidence            9999999996532 1    23345678899999999999887643    333 8999999876521              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+.   ++++.+++||.+.++..........+..........+         ...+
T Consensus       152 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p---------~~r~  221 (280)
T 3tox_A          152 -GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA---------LKRI  221 (280)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST---------TSSC
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc---------cCCC
Confidence             22234679999999999999988774   7999999999999885321100001122222222211         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      ..++|+|++++.++....    +..+++.+|..++.
T Consensus       222 ~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          222 ARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             cCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            789999999999997643    55788888766553

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.87  E-value=4.6e-21  Score=169.65  Aligned_cols=230  Identities=17%  Similarity=0.105  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhc-----CCCCeeEEecccCCcccC--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWI-----GHPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~-----~~~~~~~~~~d~~~~~~~--------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|+++.|+.... .+.+....     ...++.++.+|+++.+..        
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G-~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAG-HRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            35789999999999999999999999 9999998863222 22222111     124688999999997432        


Q ss_pred             ----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           97 ----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                          ++|+||||||......    ..++....+++|+.++.++++++    ++.+. ++|++||...+..          
T Consensus        83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~----------  152 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG----------  152 (324)
T ss_dssp             HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------
T ss_pred             HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC----------
Confidence                6999999999654322    23456778899999999999988    55555 8999999887632          


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCc---cHHHHHHHHHHcCCCeEEecC
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDG---RVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  237 (346)
                           .......|+.+|.+.|.+.+.++.+   .++++++++||.+.++.......   ..... ...............
T Consensus       153 -----~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  226 (324)
T 3u9l_A          153 -----TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHAR-QAEYEAGPNAGLGEE  226 (324)
T ss_dssp             -----CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHH-HHHHHHTTTTTHHHH
T ss_pred             -----CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHH-HHhhccccccCCHHH
Confidence                 1122356999999999999998877   48999999999998653211100   00111 111111110000000


Q ss_pred             Ccc-----eeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCCHH
Q 019060          238 GTQ-----TRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTML  277 (346)
Q Consensus       238 ~~~-----~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~~  277 (346)
                      -..     ..+..+++|+|++++.+++.+.  .....+.++....+.
T Consensus       227 ~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~  273 (324)
T 3u9l_A          227 IKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGAD  273 (324)
T ss_dssp             HHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHH
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHH
Confidence            000     0112578999999999998774  334555555555533

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.87  E-value=4.2e-21  Score=166.38  Aligned_cols=219  Identities=16%  Similarity=0.120  Sum_probs=153.3

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------   96 (346)
                      ...++++|||||+|+||++++++|+++| +.|++++|+.....+...+ . ..++.++.+|+++.+..            
T Consensus        24 ~l~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           24 DLNQRVCIVTGGGSGIGRATAELFAKNG-AYVVVADVNEDAAVRVANE-I-GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3456899999999999999999999999 9999999854222211111 2 24688899999997432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++.    +.+. ++|++||...+.               
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  165 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATS---------------  165 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCc---------------
Confidence            6999999999765332    234566788899999998888763    3344 899999988763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +..+...|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+.....  ...............         ....
T Consensus       166 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~---------~~~~  235 (277)
T 4dqx_A          166 -AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR---------AVMD  235 (277)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT---------STTC
T ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc---------Cccc
Confidence             23344679999999999999888764   78999999999987520000  000001111111111         1123


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .+.+++|+|++++.++....    +..+++.+|..++
T Consensus       236 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          236 RMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence            57789999999999987543    5578888876554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.87  E-value=4.3e-21  Score=164.52  Aligned_cols=212  Identities=12%  Similarity=0.003  Sum_probs=149.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..  ......... ..++.++.+|+++.+..            +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAG-ANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            36899999999999999999999999 99999998653  221222211 23578899999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..+++...+++|+.++..+.++    +++.+. ++|++||...+..               
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  144 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG---------------  144 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccC---------------
Confidence            999999999754322    2345677889999977666554    455555 8999999887632               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH---HHH---H----HHHHcCCCeEEe
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV---SNF---I----AQAIRGEPLTVQ  235 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~---~~~---~----~~~~~~~~~~~~  235 (346)
                       ..+...|+.+|...+.+.+.++.+.   ++++++++||.++++...    ...   ...   .    .... .      
T Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~-~------  212 (255)
T 2q2v_A          145 -STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ----KQIDDRAANGGDPLQAQHDLL-A------  212 (255)
T ss_dssp             -CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH----HHHHHHHHHTCCHHHHHHHHH-T------
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh----hhcccccccccchHHHHHHHH-h------
Confidence             1223579999999999999988774   689999999999987411    111   000   0    1110 1      


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                       .......+++++|+|++++.++..+.    +..+++.++..
T Consensus       213 -~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          213 -EKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             -TTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             -ccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCcc
Confidence             11122358899999999999886532    45788877643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.87  E-value=5e-21  Score=165.79  Aligned_cols=214  Identities=19%  Similarity=0.070  Sum_probs=152.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      ..+|++|||||+|+||++++++|+++| +.|++++|+.........++.. ..++.++.+|+++.+..            
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAG-AQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999 9999999965333222222211 23688899999997532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ..++.+..+++|+.++..+++++..    .+  .++|++||...+..             
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~-------------  175 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII-------------  175 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc-------------
Confidence            6999999999765433    2345567788999999998887643    22  48999999876531             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                       ....+...|+.+|...+.+.+.++.+   .++++.+++||.+..+....     ............+         ...
T Consensus       176 -~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~-----~~~~~~~~~~~~p---------~~r  240 (276)
T 3r1i_A          176 -NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEP-----LADYHALWEPKIP---------LGR  240 (276)
T ss_dssp             -CCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGG-----GGGGHHHHGGGST---------TSS
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-----chHHHHHHHhcCC---------CCC
Confidence             11223457999999999999998877   47999999999999875321     1112222221111         124


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +..++|+|++++.++....    +..+++.+|.
T Consensus       241 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          241 MGRPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             CBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence            6788999999999987543    4567777764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.87  E-value=1.1e-20  Score=160.31  Aligned_cols=206  Identities=12%  Similarity=0.047  Sum_probs=147.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      |+|++|||||+|+||++++++|+++| ++|++++|+...    ..+.+   ++..+.+|+.+ +..            ++
T Consensus         1 ~~k~vlVTGas~giG~~~a~~l~~~G-~~V~~~~r~~~~----~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            1 MERKALVTGGSRGIGRAIAEALVARG-YRVAIASRNPEE----AAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHH----HHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHH----HHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            35799999999999999999999999 999999986422    22222   27788999988 432            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+...              .
T Consensus        72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------~  137 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAG--------------G  137 (239)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------T
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCC--------------C
Confidence            99999999754322    23456788899999999888876    34454 99999999876421              1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ..+...|+.+|...+.+.+.++.+.   +++++++|||.+.++...    ...  +..........+         ...+
T Consensus       138 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~p---------~~~~  204 (239)
T 2ekp_A          138 PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL----PLRQNPELYEPITARIP---------MGRW  204 (239)
T ss_dssp             TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHTCHHHHHHHHTTCT---------TSSC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhh----ccccCHHHHHHHHhcCC---------CCCC
Confidence            1234579999999999999888764   799999999999887421    110  112222221111         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..++|+|++++.++..+.    +..+++.+|.
T Consensus       205 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          205 ARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            799999999999886532    4456666653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.87  E-value=7.8e-21  Score=163.61  Aligned_cols=202  Identities=14%  Similarity=0.089  Sum_probs=147.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+...          ..++.++.+|+++.+..            ++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEG-SKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986432          13678899999987532            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++..+++++..    .+ .++|++||...+.                +
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  139 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASI----------------I  139 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhcc----------------C
Confidence            99999999754322    3345678899999998888887753    33 3999999988763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHH-------H----HHHHHHHcCCCeEEec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVV-------S----NFIAQAIRGEPLTVQA  236 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~-------~----~~~~~~~~~~~~~~~~  236 (346)
                      ..+...|+.+|...|.+.+.++.+..  +++++++||.+.++...    ...       .    ..........      
T Consensus       140 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~------  209 (264)
T 2dtx_A          140 TKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVR----KAAELEVGSDPMRIEKKISEWGHEH------  209 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHH----HHHHHHHCSCHHHHHHHHHHHHHHS------
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchh----hhhhcccccCchhhHHHHHHHHhcC------
Confidence            22346799999999999999887754  88999999998765310    000       0    1111111110      


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                         ....+++++|+|++++.++..+.    +..+++.++.
T Consensus       210 ---p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          210 ---PMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence               11357899999999999987542    4467777754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.87  E-value=2.3e-21  Score=166.70  Aligned_cols=221  Identities=11%  Similarity=0.045  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-C--CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-G--HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+.....+ .  ..++.++.+|+++.+..           
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            36899999999999999999999999 999999986432011111111 1  24678899999987532           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++||+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+..             
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  148 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-------------  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcC-------------
Confidence             5999999999754322    234567888999999998888764    3444 9999999887632             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHH-Hc-CCCeEEe-cCCcc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IR-GEPLTVQ-APGTQ  240 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-~~~~~  240 (346)
                         ..+...|+.+|...+.+.+.++.+.   ++++++++||.+.++....    ......... .. ....... .....
T Consensus       149 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p  221 (260)
T 1x1t_A          149 ---SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK----QISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHHCT
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHH----hhhhhccccCCchHHHHHHHhhccCC
Confidence               2233579999999999999888764   7899999999999875321    111000000 00 0000000 00001


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ...+.+++|+|++++.++....    +..+++.+|.
T Consensus       222 ~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            2357899999999999987532    4467777653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.87  E-value=3e-21  Score=166.45  Aligned_cols=214  Identities=14%  Similarity=0.048  Sum_probs=153.5

Q ss_pred             CCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      ++++|||||+  |+||++++++|+++| ++|++++|+. ...+...+... .....++.+|+++.+..            
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCC-CEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5789999999  999999999999999 9999999865 22222222211 12347889999986432            


Q ss_pred             CCCEEEEcccCCCc----c-----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 EVDQIYHLACPASP----I-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ~~d~vi~~a~~~~~----~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      ++|+|||+||....    .     ...+++...+++|+.++.++++++...   +.++|++||...+.            
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  154 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------  154 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc------------
Confidence            58999999997542    1     233456788999999999999998764   23899999987653            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++.....  .....+......+.++         
T Consensus       155 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~p~---------  219 (265)
T 1qsg_A          155 ----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPI---------  219 (265)
T ss_dssp             ----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS--TTHHHHHHHHHHHSTT---------
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc--cccHHHHHHHHhcCCC---------
Confidence                12233579999999999999988775   78999999999998853211  1122233322222211         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..+.+++|+|++++.++....    +..+++.++..+
T Consensus       220 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          220 RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCC
Confidence            246789999999999886532    446888877544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.87  E-value=3.6e-21  Score=164.94  Aligned_cols=207  Identities=14%  Similarity=0.112  Sum_probs=146.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCCCC-CcchhhhhcCCCCeeEEecccCCc-ccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTG-SKDNLRKWIGHPRFELIRHDVTEP-LLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~d~~~~-~~~-----------   96 (346)
                      .+|+++||||+|+||++++++|+++| +. |++++|+... ..+.+.......++.++.+|+++. +..           
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G-~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRN-LKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTC-CSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCC-CcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 86 8888886421 111122222224688899999987 421           


Q ss_pred             -CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHH----c----CCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----V----GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|+|||+||...    .+++...+++|+.++.++++++..    .    +.++|++||...+.               
T Consensus        83 g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  143 (254)
T 1sby_A           83 KTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN---------------  143 (254)
T ss_dssp             SCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred             CCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc---------------
Confidence             6999999998643    467888999999999999988753    2    23799999998763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +......|+.+|...|.+.+.++.+   .++++++++||.+.++....... +.  ..........            .
T Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~------------~  209 (254)
T 1sby_A          144 -AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNS-WLDVEPRVAELLLS------------H  209 (254)
T ss_dssp             -CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC-GGGSCTTHHHHHTT------------S
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccch-hhhhhHHHHHHHhc------------C
Confidence             2223357999999999999988765   58999999999998763211000 00  0000111111            1


Q ss_pred             ecccHHHHHHHHHHHHhCCC-CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN-TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~  271 (346)
                      .+.+++|+|++++.+++... +..|++.+|
T Consensus       210 ~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             CCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence            23489999999999887555 446777776

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.87  E-value=4.8e-21  Score=166.51  Aligned_cols=220  Identities=16%  Similarity=0.133  Sum_probs=152.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC---------Ccchhhh---hc--CCCCeeEEecccCCcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG---------SKDNLRK---WI--GHPRFELIRHDVTEPLLI   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~---------~~~~~~~---~~--~~~~~~~~~~d~~~~~~~   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.+.         ..+.+.+   .+  ...++.++.+|+++.+..
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEG-ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46899999999999999999999999 999999884211         1111111   11  124678899999987532


Q ss_pred             ------------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCC
Q 019060           97 ------------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDP  154 (346)
Q Consensus        97 ------------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~  154 (346)
                                  ++|++||+||......    ..+++...+++|+.++.++++++.    +.+  .++|++||...+.  
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--  170 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--  170 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc--
Confidence                        6999999999765433    234567788999999999988763    333  3899999988753  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHH-HcCC
Q 019060          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA-IRGE  230 (346)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~-~~~~  230 (346)
                                    +......|+.+|...+.+.+.++.+   .++++.+++||.++++...   .......+... ....
T Consensus       171 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~  233 (280)
T 3pgx_A          171 --------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIE---PEAMMEIFARHPSFVH  233 (280)
T ss_dssp             --------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC---HHHHHHHHHHCGGGGG
T ss_pred             --------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccc---hhhhhhhhhcCchhhh
Confidence                          2233467999999999999998876   5799999999999998632   11111111110 0011


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+.. .. .....+.+++|+|++++.++....    +..+++.+|.
T Consensus       234 ~~~~-~~-~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  277 (280)
T 3pgx_A          234 SFPP-MP-VQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA  277 (280)
T ss_dssp             GSCC-BT-TBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred             hhhh-cc-cCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            1111 11 111248899999999999986543    4567777653

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.87  E-value=5.6e-21  Score=164.58  Aligned_cols=213  Identities=11%  Similarity=0.134  Sum_probs=152.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+....+. ...++.++.+|+++.+..            +
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999985432222111111 124688999999997532            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||.... .    ...+++...+++|+.++.++++++.    +.+.++|++||...+.                
T Consensus        89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  152 (264)
T 3ucx_A           89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH----------------  152 (264)
T ss_dssp             CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC----------------
T ss_pred             CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc----------------
Confidence            9999999986422 1    1234567789999999999988753    3345999999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH-----------HHHHHHHHcCCCeEE
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV-----------SNFIAQAIRGEPLTV  234 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~-----------~~~~~~~~~~~~~~~  234 (346)
                      +......|+.+|...+.+.+.++.+   .++++.+++||.++++..    ...+           ..+......+.    
T Consensus       153 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~----  224 (264)
T 3ucx_A          153 SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL----KSYFEHQAGKYGTSVEDIYNAAAAGS----  224 (264)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHH----HHHHHHHHHHTTCCHHHHHHHHHTTS----
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccH----HHHHHhhhhhcCCCHHHHHHHHhccC----
Confidence            2233457999999999999988876   579999999999988641    1111           11122222111    


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                           ....+.+++|+|++++.++....    +..+++.+|..
T Consensus       225 -----p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          225 -----DLKRLPTEDEVASAILFMASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             -----SSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             -----CcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence                 22357899999999999886532    55788887764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.87  E-value=1.2e-21  Score=167.82  Aligned_cols=213  Identities=16%  Similarity=0.134  Sum_probs=126.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.........+.. ....+.++.+|+++.+..            +
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999985432222222211 124678899999997432            6


Q ss_pred             CCEEEEcccCCCcc-------ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           98 VDQIYHLACPASPI-------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      +|+|||+||.....       ...+++...+++|+.++..+.+++    ++.+. ++|++||...+.             
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  153 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL-------------  153 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC-------------
Confidence            99999999974311       123456778899999966666554    44444 899999988762             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                            +...|+.+|.+.+.+.+.++.+.   ++++++++||.++++.....   ....+......+.         ...
T Consensus       154 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~---------~~~  215 (253)
T 3qiv_A          154 ------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT---TPKEMVDDIVKGL---------PLS  215 (253)
T ss_dssp             ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------------
T ss_pred             ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc---CcHHHHHHHhccC---------CCC
Confidence                  12459999999999999998875   68999999999998753211   1111222222111         123


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .+..++|+|++++.++....    ++.|++.+|..++
T Consensus       216 ~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          216 RMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             ----CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             CCCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            45678999999999986543    5678888876543

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.87  E-value=5.7e-21  Score=165.39  Aligned_cols=217  Identities=13%  Similarity=0.027  Sum_probs=148.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCccc-------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLL-------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~-------------~   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..........+. ...++.++.+|+.+.+.             .
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999986422111111111 12467889999998642             3


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++.++++++.    +.+. ++|++||...+..              
T Consensus        99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------  164 (273)
T 1ae1_A           99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA--------------  164 (273)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC--------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCC--------------
Confidence            6999999999754322    234567788899999999988773    3444 9999999987642              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccH--HHHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRV--VSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        ..+...|+.+|...+.+.+.++.+.   ++++++++||.++++.........  ............+         ..
T Consensus       165 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------~~  233 (273)
T 1ae1_A          165 --LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------MG  233 (273)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST---------TC
T ss_pred             --CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC---------CC
Confidence              2233579999999999999887764   899999999999988532110000  0111111111111         12


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .+.+++|+|++++.++....    +..+++.+|..
T Consensus       234 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          234 RAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            47789999999999886532    45677777643

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.87  E-value=7.4e-21  Score=164.77  Aligned_cols=212  Identities=16%  Similarity=0.109  Sum_probs=148.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+...++....++.++.+|+++.+..            ++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAG-ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 999999986422221112221222678899999986432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-----CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-----ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-----~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |+|||+||......    ..+++...+++|+.++..+++++.    +.+     .++|++||...+..            
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~------------  174 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISA------------  174 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCC------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCC------------
Confidence            99999999754322    234567889999999988877653    333     48999999887632            


Q ss_pred             CCCCCCCCC-chHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHc--CCCeEEecCCc
Q 019060          166 NVNPIGVRS-CYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR--GEPLTVQAPGT  239 (346)
Q Consensus       166 ~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  239 (346)
                          ..... .|+.+|...|.+.+.++.+.   ++++++++||.+..+..    .............  ..+        
T Consensus       175 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~p--------  238 (276)
T 2b4q_A          175 ----MGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMT----RHIANDPQALEADSASIP--------  238 (276)
T ss_dssp             ----CCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTT----HHHHHCHHHHHHHHHTST--------
T ss_pred             ----CCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcch----hhcchhHHHHHHhhcCCC--------
Confidence                11123 69999999999999888763   79999999999988742    1111111111111  111        


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                       ...+.+++|+|++++.++..+.    +..+++.+|.
T Consensus       239 -~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          239 -MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             -TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             -CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence             1247899999999999987542    4467777664

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.87  E-value=5.7e-21  Score=164.56  Aligned_cols=209  Identities=19%  Similarity=0.126  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....          ....+.+|+.+....            ++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   95 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAG-ARVAVADRAVAGIA----------ADLHLPGDLREAAYADGLPGAVAAGLGRL   95 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEECSSCCTTSC----------CSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH----------hhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 99999998543221          123347888886432            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                +
T Consensus        96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  159 (266)
T 3uxy_A           96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLR----------------P  159 (266)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTB----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----------------C
Confidence            99999999765433    23456778889999999999887    45444 999999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC---CccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID---DGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++++++||.+.++.....   ...............         .....
T Consensus       160 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------~p~~r  230 (266)
T 3uxy_A          160 GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------VPLGR  230 (266)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT---------STTSS
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc---------CCCCC
Confidence            2344679999999999999888775   79999999999987631000   000001111111111         12235


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +.+++|+|++++.++....    +..+++.+|..++
T Consensus       231 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          231 IAEPEDIADVVLFLASDAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCEEEECcCEeCC
Confidence            7899999999999987643    5578888876553

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.87  E-value=1.7e-21  Score=167.91  Aligned_cols=210  Identities=11%  Similarity=0.005  Sum_probs=145.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++|+.....+.. +.. ..++.++.+|+++.+..            ++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQG-AIVGLHGTREDKLKEIA-ADL-GKDVFVFSANLSDRKSIKQLAEVAEREMEGI  102 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHH-HHH-CSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHH-HHh-CCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999998542222211 112 24688999999997532            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+.                +
T Consensus       103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~----------------~  166 (266)
T 3grp_A          103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV----------------G  166 (266)
T ss_dssp             CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC---------------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcC----------------C
Confidence            99999999765322    23556788899999977666654    44454 999999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++.+++||.+.++....    .............++         ..+..
T Consensus       167 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----~~~~~~~~~~~~~p~---------~r~~~  233 (266)
T 3grp_A          167 NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK----LNEKQKEAIMAMIPM---------KRMGI  233 (266)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT----CCHHHHHHHHTTCTT---------CSCBC
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc----cCHHHHHHHHhcCCC---------CCCcC
Confidence            2234679999999999999888764   7899999999998763211    112222222322222         34678


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++|+|++++.++....    +..+++.+|.
T Consensus       234 ~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          234 GEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            9999999999887543    4578887764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=1.4e-21  Score=171.87  Aligned_cols=217  Identities=14%  Similarity=0.121  Sum_probs=150.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc------CCCCeeEEecccCCcccC--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~--------   96 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.........++.      ...++.++.+|+++.+..        
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELG-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999 999999986422211111111      134688999999987432        


Q ss_pred             ----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH-----cCCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 ----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VGARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                          ++|+|||+||......    ...++...+++|+.++.++++++..     .+.++|++||...++           
T Consensus        96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  164 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----------  164 (303)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----------
T ss_pred             HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC-----------
Confidence                5999999999643221    2244577889999999999998754     234899999987321           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                            ......|+.+|...+.+.+.++.+.   +++++++|||.++++.....................         .
T Consensus       165 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------p  229 (303)
T 1yxm_A          165 ------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI---------P  229 (303)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS---------T
T ss_pred             ------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcC---------c
Confidence                  1223569999999999999888774   799999999999998421111100011111111100         1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ...+++++|+|++++.++....    +..+++.+|..+
T Consensus       230 ~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          230 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeec
Confidence            1247899999999999986532    457888877654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.87  E-value=7.1e-21  Score=162.53  Aligned_cols=212  Identities=16%  Similarity=0.138  Sum_probs=144.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC-CCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+. ....+.+.. . ..++.++.+|+++.+..            +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEG-ADIAIADLVPAPEAEAAIRN-L-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHH-T-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCchhHHHHHHHh-c-CCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 9999999864 211111111 1 24688899999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..+++...+++|+.++.+++++    +++.+. ++|++||...+..               
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  147 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK---------------  147 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC---------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC---------------
Confidence            999999999754322    2345677889999998887776    455554 9999999987642               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                       ..+...|+.+|...+.+.+.++.+.   ++++++++||.+.++....   ...... ....... .      .....+.
T Consensus       148 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~~~~~~-~~~~~~~-~------~~~~~~~  215 (249)
T 2ew8_A          148 -IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEA---SALSAM-FDVLPNM-L------QAIPRLQ  215 (249)
T ss_dssp             -CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT-T------SSSCSCC
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchh---ccccch-hhHHHHh-h------CccCCCC
Confidence             2234579999999999999888764   7999999999998874210   000000 0000000 0      0112478


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++|+|++++.++..+.    +..+++.+|.
T Consensus       216 ~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          216 VPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            99999999999986532    4467777654

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.87  E-value=1.6e-21  Score=168.50  Aligned_cols=216  Identities=13%  Similarity=0.057  Sum_probs=152.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|.............  ...++.++.+|+++.+..            
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAG-MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999 999998854322211111111  134688999999997532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..++....+++|+.++.++++++..    .+. ++|++||...+.               
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  167 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSR---------------  167 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhcc---------------
Confidence            6999999999765432    3345677889999999998887643    444 899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+....    .....    .....    ........+
T Consensus       168 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~----~~~~~----~~~~~~~~~  234 (269)
T 3gk3_A          168 -GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEA----VPQDV----LEAKI----LPQIPVGRL  234 (269)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------------CCS----GGGCTTSSC
T ss_pred             -CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhh----hchhH----HHHHh----hhcCCcCCc
Confidence             22334679999999999999887764   7899999999998875321    11111    10000    011122356


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      ..++|+|++++.++....    +..+++.+|..+|
T Consensus       235 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          235 GRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             cCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            789999999999987653    5578888876654

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.87  E-value=5.9e-21  Score=164.76  Aligned_cols=211  Identities=14%  Similarity=0.023  Sum_probs=150.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh-hhhc-CCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++||||||+|+||++++++|+++| +.|+++.+......... .... ...++.++.+|+++.+..           
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G-~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADG-FNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH  102 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            356899999999999999999999999 99877654322211111 1111 134789999999997532           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH-----HcCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK-----RVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||......    ..+++...+++|+.++.++++++.     +.+. ++|++||...+.             
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  169 (267)
T 4iiu_A          103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVM-------------  169 (267)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHH-------------
T ss_pred             CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhcc-------------
Confidence             6999999999765432    334667888999999999988763     3333 899999987652             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                         +..+...|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+.....     ...........+.         .
T Consensus       170 ---~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~---------~  232 (267)
T 4iiu_A          170 ---GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPM---------K  232 (267)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTT---------C
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCC---------C
Confidence               22234679999999999988887764   78999999999998864321     2333333333222         2


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+..++|+|++++.++....    ++.+++.+|
T Consensus       233 ~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          233 RMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            46789999999999987542    456777765

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.87  E-value=8.2e-22  Score=171.01  Aligned_cols=212  Identities=15%  Similarity=0.080  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+..........+.. ..++.++.+|+++.+..            +
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEG-LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            35799999999999999999999999 9999999864222111111111 23678899999986432            5


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc------CC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV------GA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      +|+|||+||......    ..+++...+++|+.++.++++++...      +. ++|++||...+.              
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~--------------  165 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ--------------  165 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTS--------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccccc--------------
Confidence            999999999754322    22345778899999999999886554      43 899999987652              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHH-----------HHHHHHHcCCCe
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVS-----------NFIAQAIRGEPL  232 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~-----------~~~~~~~~~~~~  232 (346)
                        +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++..    .....           ..........  
T Consensus       166 --~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--  237 (277)
T 2rhc_B          166 --GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA----ASVREHYSDIWEVSTEEAFDRITARV--  237 (277)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHH----HHHHHHHHHHHTCCHHHHHHHHHHHS--
T ss_pred             --CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchh----hhhhhhcccccccchHHHHHHHHhcC--
Confidence              12233579999999999999887764   68999999999987631    11110           1111111111  


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                             ....+++++|+|++++.++..+.    +..+++.+|.
T Consensus       238 -------p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          238 -------PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             -------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -------CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence                   11358899999999999987542    4467877763

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.87  E-value=3.2e-21  Score=166.44  Aligned_cols=218  Identities=15%  Similarity=0.144  Sum_probs=148.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+............   ...++.++.+|+++.+..           
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 999999986422211111111   134688899999997532           


Q ss_pred             -CCCEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       ++|+|||+||.... ..    ..+++...+++|+.++..+.++    +++.+. ++|++||...+.             
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  157 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------  157 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-------------
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcc-------------
Confidence             58999999997543 11    2345677889999888766554    444454 999999987653             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCC----CccHHHHHHHHHHcCCCeEEecCC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID----DGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                         +..+...|+.+|...+.+.+.++.+   .++++++++||.++++.....    ................        
T Consensus       158 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------  226 (267)
T 1iy8_A          158 ---GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN--------  226 (267)
T ss_dssp             ---BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC--------
T ss_pred             ---CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC--------
Confidence               1223457999999999999988766   379999999999987631100    0000000000111111        


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                       ....+.+++|+|++++.++..+.    +..+++.+|..+
T Consensus       227 -p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          227 -PSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             -TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             -CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence             11247899999999999887542    456778777544

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.87  E-value=1.2e-21  Score=169.19  Aligned_cols=215  Identities=11%  Similarity=0.002  Sum_probs=152.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+...... ....+..+.+|+++.+..            +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRG-AMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999985422221111111 123678899999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++.++++++.    +.+ .++|++||...+.                
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------  169 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSA----------------  169 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC----------------
Confidence            999999999765432    334567889999999999988764    233 3899999987652                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +..+...|+.+|...+.+.+.++.+   .++++.+++||.+..+....    +............         ....+.
T Consensus       170 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~---------p~~r~~  236 (270)
T 3ftp_A          170 GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG----LPQEQQTALKTQI---------PLGRLG  236 (270)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH----SCHHHHHHHHTTC---------TTCSCB
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh----cCHHHHHHHHhcC---------CCCCCC
Confidence            2223467999999999999988876   47899999999998763110    0111122222221         123577


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +++|+|++++.++....    +..+++.+|..+|
T Consensus       237 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          237 SPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSCC
T ss_pred             CHHHHHHHHHHHhCCCcCCccCcEEEECCCcccC
Confidence            99999999999886432    5578888876543

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.87  E-value=9.2e-21  Score=165.89  Aligned_cols=215  Identities=11%  Similarity=-0.002  Sum_probs=154.4

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|  +||++++++|+++| +.|++++|+.. ..+...... ....+.++.+|+++.+..           
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQG-AEVALTYLSET-FKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCC-CEEEEEeCChH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999997  99999999999999 99999998642 122222211 113467899999997542           


Q ss_pred             -CCCEEEEcccCCCc--------cccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||....        ....+++...+++|+.++..+++++...   +.++|++||...+.            
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~------------  174 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK------------  174 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc------------
Confidence             69999999997643        1233467788999999999999998754   23899999987653            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.....  ..............++         
T Consensus       175 ----~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~p~---------  239 (296)
T 3k31_A          175 ----VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI--SDFHYILTWNKYNSPL---------  239 (296)
T ss_dssp             ----CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC--HHHHHHHHHHHHHSTT---------
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc--cchHHHHHHHHhcCCC---------
Confidence                22334679999999999999888764   78999999999998753211  1112222222222221         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..+..++|+|++++.++....    +..+++.+|..+
T Consensus       240 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          240 RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccc
Confidence            235678999999999997532    557888877554

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.87  E-value=3e-21  Score=165.22  Aligned_cols=215  Identities=17%  Similarity=0.144  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..... .....+ ..++.++.+|+++.+..            ++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEG-AKVAFSDINEAAGQ-QLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHH-HHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999998542211 111112 24688899999987532            48


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |+|||+||......    ..+++...+++|+.++..+.++    +++.+.++|++||...+.                +.
T Consensus        82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  145 (253)
T 1hxh_A           82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------PI  145 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------CC
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC----------------CC
Confidence            99999999764322    2345677889998877766654    444445899999988763                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHH---h--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQ---H--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~---~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      .+...|+.+|...|.+.+.++.+   .  +++++++|||.++++.......   ............     .......+.
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~~-----~~~p~~~~~  217 (253)
T 1hxh_A          146 EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP---KGVSKEMVLHDP-----KLNRAGRAY  217 (253)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC---TTCCHHHHBCBT-----TTBTTCCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc---hhhhHHHHhhhh-----ccCccCCCC
Confidence            23457999999999999888766   3  8999999999999863110000   000000011100     001113478


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++|+|++++.++..+.    +..+++.+|.
T Consensus       218 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          218 MPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             CHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999999999987542    4467777654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.87  E-value=1.2e-20  Score=164.19  Aligned_cols=218  Identities=15%  Similarity=0.061  Sum_probs=150.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..+|++|||||+|+||++++++|+++| ++|++++|+.....+...+.+  ...++.++.+|+++.+..           
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999 999999986422111111111  123688899999986432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc--C-CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV--G-ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                       ++|+|||+||......    ..+++...+++|+.++.++++++...  + .++|++||...+..               
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~---------------  170 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAK---------------  170 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCS---------------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccC---------------
Confidence             5999999999764322    23456788999999999999998765  3 49999999876421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCC-------CccHHHHHHHHHHc--CCCeEEec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIR--GEPLTVQA  236 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~  236 (346)
                      ...+...|+.+|...+.+.+.++.+   .++++++++||.+.++.....       ....-.........  ..+     
T Consensus       171 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-----  245 (283)
T 1g0o_A          171 AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP-----  245 (283)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT-----
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC-----
Confidence            1112457999999999999988765   379999999999987631100       00000111111111  111     


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                          ...+.+++|+|++++.++....    +..+++.+|.
T Consensus       246 ----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          246 ----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence                1246789999999999997542    4467777654

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.87  E-value=2e-20  Score=161.44  Aligned_cols=202  Identities=13%  Similarity=0.036  Sum_probs=148.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|+||||||+|+||++++++|+++|.  +.|++++|+..... .+.+... ..++.++.+|+++.+..           
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            467999999999999999999999985  78999999754332 2222211 24788999999987532           


Q ss_pred             ---CCCEEEEcccCCC-cc----ccccChHHHHHHHHHHHHHHHHHHHHc----------------CCeEEEEecccccC
Q 019060           97 ---EVDQIYHLACPAS-PI----FYKYNPVKTIKTNVIGTLNMLGLAKRV----------------GARILLTSTSEVYG  152 (346)
Q Consensus        97 ---~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------------~~r~i~~SS~~v~~  152 (346)
                         ++|+|||+||... ..    ...++....+++|+.++..+++++...                +.+||++||...+.
T Consensus        99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  178 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  178 (267)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccc
Confidence               5999999999765 11    123456778899999999998877543                34899999988764


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC
Q 019060          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG  229 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~  229 (346)
                      ...             +..+...|+.+|.+.|.+.+.++.+   .+++++++|||.+..+....                
T Consensus       179 ~~~-------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------  229 (267)
T 1sny_A          179 QGN-------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------------  229 (267)
T ss_dssp             TTC-------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT----------------
T ss_pred             cCC-------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC----------------
Confidence            211             1123457999999999999988776   58999999999988764210                


Q ss_pred             CCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CCcEEecCCCCC
Q 019060          230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEF  274 (346)
Q Consensus       230 ~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~  274 (346)
                                  ..++..+|+|+.++.++....   .|.|...++..+
T Consensus       230 ------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                        024678999999999987653   566655554444

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.86  E-value=3e-21  Score=168.82  Aligned_cols=216  Identities=16%  Similarity=0.115  Sum_probs=153.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC-CCcchhhhhc--CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWI--GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|... ...+......  ...++.++.+|+++.+..           
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREG-ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 99999888532 1111121111  124688899999997432           


Q ss_pred             -CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|++||+||.....     ...+++...+++|+.++.++++++...-   .++|++||...+.               
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~---------------  191 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ---------------  191 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS---------------
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc---------------
Confidence             699999999975421     1334567889999999999999987642   3899999998764               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +......|+.+|...+.+.+.++.+.   ++++.+++||.++++........  ......         .........+
T Consensus       192 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~--~~~~~~---------~~~~~p~~r~  259 (294)
T 3r3s_A          192 -PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT--QDKIPQ---------FGQQTPMKRA  259 (294)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC--GGGSTT---------TTTTSTTSSC
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC--HHHHHH---------HHhcCCCCCC
Confidence             22334579999999999999988775   89999999999987631000000  000000         0111122357


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..++|+|++++.++....    +.++++.+|..+
T Consensus       260 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          260 GQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            789999999999886543    567888887654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.86  E-value=3.7e-21  Score=167.04  Aligned_cols=214  Identities=14%  Similarity=0.019  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|......+.....+  ...++.++.+|+++.+..            
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASG-FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999 999999864322222221111  124688999999997543            


Q ss_pred             CCCEEEEcccCCC--ccc----cccChHHHHHHHHHHHHHHHHHHHHc----C----CeEEEEecccccCCCCCCCCCCC
Q 019060           97 EVDQIYHLACPAS--PIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G----ARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ~~d~vi~~a~~~~--~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~----~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                      ++|++||+||...  ...    ..+++...+++|+.++..+++++...    +    .++|++||...+.          
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------  176 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM----------  176 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----------
Confidence            6999999999732  111    33456778889999999888776432    2    3899999987652          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+   .++++.+++||.+..+....    ........... .       ..
T Consensus       177 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~-~-------~~  238 (280)
T 4da9_A          177 ------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAA----VSGKYDGLIES-G-------LV  238 (280)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------------
T ss_pred             ------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhh----cchhHHHHHhh-c-------CC
Confidence                  2223356999999999999998877   47899999999998875221    11111111110 0       11


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ....+..++|+|++++.++....    +..+++.+|..
T Consensus       239 p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          239 PMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             ---CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            12357789999999999997654    55788887654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.86  E-value=4.4e-22  Score=171.92  Aligned_cols=223  Identities=16%  Similarity=0.121  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC---CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG---HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.............   ..++.++.+|+++.+..           
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            36799999999999999999999999 9999999864221111111111   23578899999987432           


Q ss_pred             -CCCEEEEcccCCCccccccChHHHHHHHHHHHHH----HHHHHHHcC----CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLN----MLGLAKRVG----ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~----~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|+|||+||...    ..++...+++|+.++..    ++..+++.+    .++|++||...+..              
T Consensus        85 g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  146 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP--------------  146 (267)
T ss_dssp             SCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC--------------
T ss_pred             CCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCC--------------
Confidence             5899999998653    45678888999886554    455555542    38999999987642              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHH--H---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYH--R---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~--~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        ..+...|+.+|...+.+.+.++  .   ..++++++++||.+.++.......   ........  .............
T Consensus       147 --~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~  219 (267)
T 2gdz_A          147 --VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK---EENMGQYI--EYKDHIKDMIKYY  219 (267)
T ss_dssp             --CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC---HHHHGGGG--GGHHHHHHHHHHH
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc---ccccchhh--hHHHHHHHHhccc
Confidence              1223569999999999988742  2   247899999999998763110000   00000000  0000000001123


Q ss_pred             ecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCCHHHH
Q 019060          243 SFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTMLEL  279 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~~ei  279 (346)
                      .+++++|+|++++.++..+.  +..+++.+++.+++.|+
T Consensus       220 ~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          220 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred             cCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence            57899999999999998654  56889988887766543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.86  E-value=2.2e-21  Score=167.90  Aligned_cols=222  Identities=13%  Similarity=0.012  Sum_probs=156.8

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|+||||||+  |+||++++++|+++| +.|++++|+. ...+...+.. ....+.++.+|+++.+..           
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G-~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREG-AELAFTYVGD-RFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSG-GGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcC-CCEEEEecch-hhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            47899999999  999999999999999 9999999863 2222222221 123578999999997432           


Q ss_pred             -CCCEEEEcccCCCcc---------ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                       ++|++||+||.....         ...++....+++|+.++..+++++...   +.++|++||...+.           
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------  159 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----------  159 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc-----------
Confidence             589999999976531         233456788999999999999998764   33899999987653           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|.+.+.+.+.++.+.   ++++++++||.+..+.....  ..............++        
T Consensus       160 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~--------  224 (271)
T 3ek2_A          160 -----AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI--KSFGKILDFVESNSPL--------  224 (271)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC--HHHHHHHHHHHHHSTT--------
T ss_pred             -----CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc--cchHHHHHHHHhcCCc--------
Confidence                 22334679999999999999887764   79999999999988753211  1122333332222222        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHH
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAE  281 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~  281 (346)
                       ..+..++|+|++++.++....    +..+++.+|..+++.++.+
T Consensus       225 -~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~  268 (271)
T 3ek2_A          225 -KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG  268 (271)
T ss_dssp             -SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred             -CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence             246688999999999987532    5578888887776655543

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.86  E-value=8.2e-21  Score=164.82  Aligned_cols=217  Identities=12%  Similarity=-0.008  Sum_probs=151.2

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+..........+.. ...+.++.+|+++.+..            
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999 9999999864322222222211 24688999999997532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH------cCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR------VGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      ++|+|||+||......    ..++....+++|+.++..+++++..      .+. ++|++||...+.             
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~-------------  167 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ-------------  167 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS-------------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc-------------
Confidence            5999999999765332    2244667888999999999987654      344 899999988753             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCC-------CccHHHHHHHHHHcCCCeEEe
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  235 (346)
                         +......|+.+|...+.+.+.++.+   .++++.+++||.+.++.....       ................     
T Consensus       168 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  239 (279)
T 3sju_A          168 ---GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI-----  239 (279)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC-----
T ss_pred             ---CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC-----
Confidence               2233467999999999999988877   478999999999987531000       0000111222222211     


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                          ....+..++|+|++++.++....    +..+++.+|.
T Consensus       240 ----p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          240 ----PLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             ----TTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             ----CCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence                12356789999999999887543    5578887764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.86  E-value=7.3e-21  Score=162.18  Aligned_cols=212  Identities=16%  Similarity=0.081  Sum_probs=147.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|......+...+.+  ...++.++.+|+++.+..            
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQG-ANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36899999999999999999999999 999999883222111111111  124678899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+..              
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  147 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTG--------------  147 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCC--------------
Confidence            6999999999764322    23456778899999977766654    44454 9999999876421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ..+...|+.+|...+.+.+.++.+   .++++++++||.+..+..........    .......+         ...+
T Consensus       148 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----~~~~~~~p---------~~~~  212 (246)
T 2uvd_A          148 --NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIK----AEMLKLIP---------AAQF  212 (246)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHH----HHHHHTCT---------TCSC
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHH----HHHHhcCC---------CCCC
Confidence              122357999999999998887765   37999999999998875322111111    11111111         1247


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++++|+|++++.++..+.    +..+++.+|.
T Consensus       213 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          213 GEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            899999999999986532    4467777664

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.86  E-value=6.7e-21  Score=162.50  Aligned_cols=210  Identities=15%  Similarity=0.106  Sum_probs=151.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+ ..+.+. .....+.+|+++.+..            ++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERG-AKVIGTATSESGAQA-ISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHH-HHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 999999986432221 112222 2577899999997532            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+.                +
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  148 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM----------------G  148 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcC----------------C
Confidence            99999999765432    3345678899999999999887643    444 899999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+......    ...........+         ...+.+
T Consensus       149 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~p---------~~r~~~  215 (248)
T 3op4_A          149 NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN----DEQRTATLAQVP---------AGRLGD  215 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC----HHHHHHHHHTCT---------TCSCBC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC----HHHHHHHHhcCC---------CCCCcC
Confidence            2334679999999999999888764   799999999999887533211    122222222211         125778


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++|+|++++.++....    +..+++.+|.
T Consensus       216 p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          216 PREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            9999999999886543    4567777764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.86  E-value=1.5e-21  Score=171.23  Aligned_cols=207  Identities=15%  Similarity=0.058  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++||||||+|+||++++++|+++| +.|++++|+.....+....+. ...++.++.+|+++.+..            +
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRG-ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999 999999986432222222211 124688999999997543            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||......    ..++....+++|+.++.++++++.    +.+  .++|++||...+.               
T Consensus       109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  173 (301)
T 3tjr_A          109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV---------------  173 (301)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC---------------
Confidence            999999999765322    234567789999999999988763    333  3899999988763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHH-----HHcCCCeEEecCCc
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ-----AIRGEPLTVQAPGT  239 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  239 (346)
                       +......|+.+|...+.+.+.++.+.   ++++++++||.+..+.        .......     .....+...++...
T Consensus       174 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (301)
T 3tjr_A          174 -PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL--------VSNSERIRGADYGMSATPEGAFGPLP  244 (301)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH--------HHHHHHHC------------------
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc--------ccccccccchhhccccChhhhccccc
Confidence             22334679999999999999887764   7899999999988653        1111100     00111111112222


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      ....+++++|+|++++.+++++.
T Consensus       245 ~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          245 TQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             ----CCCHHHHHHHHHHHHHHTC
T ss_pred             cccCCCCHHHHHHHHHHHHhcCC
Confidence            33468999999999999998654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.86  E-value=2.7e-21  Score=165.92  Aligned_cols=214  Identities=14%  Similarity=0.093  Sum_probs=151.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh-hhhc-CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL-RKWI-GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||++++++|+++| +.|+++++......... .... ...++.++.+|+++.+..            
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDG-FRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTT-EEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999 99998884332322222 2211 124688899999986432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+.               
T Consensus        91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  155 (256)
T 3ezl_A           91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK---------------  155 (256)
T ss_dssp             CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGG---------------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcc---------------
Confidence            6899999999765322    23456778999999988877665    44554 899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|.+.+.+.+.++.+   .++++.+++||.+..+....    ..+..........++         ..+
T Consensus       156 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~~~---------~~~  221 (256)
T 3ezl_A          156 -GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA----IRPDVLEKIVATIPV---------RRL  221 (256)
T ss_dssp             -SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----SCHHHHHHHHHHSTT---------SSC
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc----cCHHHHHHHHhcCCC---------CCC
Confidence             2233467999999999999988876   47899999999998764211    112233332222211         246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      .+++|+|++++.++....    +..+++.+|..+
T Consensus       222 ~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          222 GSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             cCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            789999999999886532    457888876543

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.86  E-value=1.2e-20  Score=162.05  Aligned_cols=213  Identities=14%  Similarity=0.074  Sum_probs=149.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--CcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|++|||||+|+||++++++|+++| +.|++++|+...  ..+....+.. ..++.++.+|+++.+..            
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADG-FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHT-CEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999 999999986432  1111111111 24688899999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ..+++...+++|+.++.++++++..    .+  .++|++||...+.              
T Consensus        81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  146 (258)
T 3a28_C           81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQ--------------  146 (258)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhcc--------------
Confidence            6999999999764322    2345677899999999998887754    23  5899999987653              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHH-----------HHHHHHHcCCCe
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVS-----------NFIAQAIRGEPL  232 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~-----------~~~~~~~~~~~~  232 (346)
                        +..+...|+.+|...+.+.+.++.+.   ++++++++||.+..+...    ....           ..........  
T Consensus       147 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--  218 (258)
T 3a28_C          147 --GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWE----QIDAELSKINGKPIGENFKEYSSSI--  218 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHH----HHHHHHHHHHCCCTTHHHHHHHTTC--
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhh----hhhhhhccccCCchHHHHHHHHhcC--
Confidence              12233579999999999999887764   799999999998765310    0010           0011111110  


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                             ....+.+++|+|++++.++..+.    +..+++.+|..+
T Consensus       219 -------p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          219 -------ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             -------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             -------CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence                   11247899999999999987542    446777776543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.86  E-value=5.3e-21  Score=161.80  Aligned_cols=188  Identities=14%  Similarity=-0.023  Sum_probs=131.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++||||||+|+||++++++|+++| ++|++++|+.... +.+....  .++.++.+|+.+.+..            ++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~-~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKG-YRVGLMARDEKRL-QALAAEL--EGALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHS--TTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHHHh--hhceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999 9999999853211 1111111  2678899999986432            68


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..++....+++|+.++..+++.    +++.+. +||++||...+.                +
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------------~  143 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKN----------------P  143 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTS----------------C
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcC----------------C
Confidence            99999999654322    2345677889999998765554    455555 899999987763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...|.+.+.++.+   .+++++++|||.+..+...        .. .     ..          +.+++
T Consensus       144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--------~~-~-----~~----------~~~~~  199 (234)
T 2ehd_A          144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG--------NT-P-----GQ----------AWKLK  199 (234)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------------CC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc--------cc-c-----cc----------cCCCC
Confidence            233467999999999998887765   4789999999988765311        00 0     00          11578


Q ss_pred             HHHHHHHHHHHHhCCC
Q 019060          247 VSDMVDGLIRLMEGEN  262 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~  262 (346)
                      ++|+|++++.++..+.
T Consensus       200 ~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          200 PEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.86  E-value=5.2e-21  Score=164.11  Aligned_cols=213  Identities=16%  Similarity=0.040  Sum_probs=146.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |++++|||||+|+||++++++|+++| ++|++++|+............ ...++.++.+|+++.+..            +
T Consensus         1 m~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            1 MKKVALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36799999999999999999999999 999999985422111111111 123578899999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-A-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||......    ..+++...+++|+.++..+++++..    .+ . ++|++||...+.               
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------  144 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV---------------  144 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS---------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC---------------
Confidence            999999999754322    2245567889999998887776543    34 3 899999987642               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHH-----------HHHHHHHcCCCeE
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS-----------NFIAQAIRGEPLT  233 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~  233 (346)
                       +......|+.+|...+.+.+.++.+   .++++++++||.+.++...    ....           .........    
T Consensus       145 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~~----  215 (256)
T 1geg_A          145 -GNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA----EIDRQVSEAAGKPLGYGTAEFAKR----  215 (256)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH----HHHHHHHHHHTCCTTHHHHHHHTT----
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh----hhhhhccccccCChHHHHHHHHhc----
Confidence             1122357999999999999988776   4799999999999876310    0100           000111111    


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                           .....+.+++|+|++++.++..+.    +..+.+.+|..
T Consensus       216 -----~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          216 -----ITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             -----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             -----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence                 011247899999999999987542    44677777643

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.86  E-value=8.1e-21  Score=163.74  Aligned_cols=216  Identities=15%  Similarity=0.081  Sum_probs=152.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+...++.  ...++.++.+|+++.+..            
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAG-ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999999985432222211111  134688999999997543            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++..    .+  .++|++||...+.              
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  163 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--------------  163 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--------------
Confidence            6999999999765432    2345677889999999998887643    23  3899999988763              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.......  ............+         ...
T Consensus       164 --~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p---------~~r  230 (266)
T 4egf_A          164 --PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG--DEAKSAPMIARIP---------LGR  230 (266)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC--SHHHHHHHHTTCT---------TSS
T ss_pred             --CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc--ChHHHHHHHhcCC---------CCC
Confidence              22334679999999999999888774   7999999999998763110000  0111222222211         124


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      +..++|+|++++.++....    +..+++.+|..+
T Consensus       231 ~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          231 FAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            6789999999999987532    557888876543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.86  E-value=2.8e-20  Score=158.73  Aligned_cols=204  Identities=16%  Similarity=0.121  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc------ccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~d~vi~~  104 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+.    +.....   ..+.++ +|+.+.      ...++|+|||+
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~----~~~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEG-AEVTICARNE----ELLKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCH----HHHHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEEEC
Confidence            47899999999999999999999999 9999999853    222222   245666 888321      11279999999


Q ss_pred             ccCCCccc----cccChHHHHHHHHHHHHHHHH----HHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLG----LAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      ||......    ..++....+++|+.++..+.+    .+++.+. ++|++||...+..                ..+...
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~~~~  152 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP----------------IENLYT  152 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------CTTBHH
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCC----------------CCCCch
Confidence            99754322    234567788899988776654    4555565 9999999988742                223467


Q ss_pred             hHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHH-HHHcCCCeEEecCCcceeecccHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIA-QAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      |+.+|...+.+.+.++.+   .++++++++||.++++...    ........ ......+         ...+.+++|+|
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~p---------~~~~~~~~dvA  219 (249)
T 1o5i_A          153 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK----ELLSEEKKKQVESQIP---------MRRMAKPEEIA  219 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH----HHSCHHHHHHHHTTST---------TSSCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCccc----ccchhhHHHHHHhcCC---------CCCCcCHHHHH
Confidence            999999999999988776   4799999999999987521    01011111 1111111         13578999999


Q ss_pred             HHHHHHHhCCC----CCcEEecCCC
Q 019060          252 DGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       252 ~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++++.++..+.    +..+++.++.
T Consensus       220 ~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          220 SVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHcCccccCCCCCEEEECCCc
Confidence            99999887532    4467777764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.86  E-value=7.2e-21  Score=159.77  Aligned_cols=199  Identities=14%  Similarity=0.065  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi  102 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+..                   +|+++.+.        .++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEH-TIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTT-EEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence            35789999999999999999999999 99999988531                   56666532        2599999


Q ss_pred             EcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060          103 HLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus       103 ~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      |+||.....     ...+++...+++|+.++..+++++...   +.++|++||...+.                +..+..
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~~~  128 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK----------------VVANTY  128 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS----------------CCTTCH
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc----------------CCCCch
Confidence            999976321     223456778999999999999998764   23899999988763                223346


Q ss_pred             chHHhHHHHHHHHHHHHHHhC-CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQHG-IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~-~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      .|+.+|...+.+.+.++.+.. +++..++||.+..+............+........+.         ..+.+++|+|++
T Consensus       129 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~dvA~~  199 (223)
T 3uce_A          129 VKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV---------GKVGEASDIAMA  199 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT---------CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC---------CCccCHHHHHHH
Confidence            799999999999999988865 8999999999998754322122222222222222221         246789999999


Q ss_pred             HHHHHhCCC--CCcEEecCCCCC
Q 019060          254 LIRLMEGEN--TGPINIGNPGEF  274 (346)
Q Consensus       254 i~~~~~~~~--~~~~~~~~~~~~  274 (346)
                      ++.+++...  +..+++.+|..+
T Consensus       200 ~~~l~~~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          200 YLFAIQNSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHCTTCCSCEEEESTTGGG
T ss_pred             HHHHccCCCCCCcEEEecCCeec
Confidence            999998654  557888877554

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.86  E-value=3e-21  Score=166.57  Aligned_cols=221  Identities=13%  Similarity=0.131  Sum_probs=151.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC--------CC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI--------EV   98 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~--------~~   98 (346)
                      ..++++|||||+|+||++++++|+++| ++|++++|+.....+...++   .....+..+.+|+.+.+..        ++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i   86 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEG-ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV   86 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence            346899999999999999999999999 99999998643222222221   1124577899999986432        69


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||.......    .++....+++|+.++..+.+++    ++.+. ++|++||...+.                +
T Consensus        87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  150 (267)
T 3t4x_A           87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIM----------------P  150 (267)
T ss_dssp             SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTS----------------C
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhcc----------------C
Confidence            999999997654332    2345667899999977776655    33444 899999988763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEE----------ec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV----------QA  236 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~  236 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++..++||.+..+.        ...++...........          ..
T Consensus       151 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (267)
T 3t4x_A          151 SQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG--------VETMLNSLYPNEQLTIEEAEKRFMKENR  222 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH--------HHHHHHHSSTTSCCCHHHHHHHHHHHHC
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc--------HHHHHhhcCcccCCCHHHHHHHHhhccC
Confidence            3344679999999999999998775   5789999999887652        1111111000000000          00


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      .......+.+++|+|++++.++....    +..+++.+|...+
T Consensus       223 ~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          223 PTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             TTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             CcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            00012357899999999999887532    5578888876654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.86  E-value=2.3e-20  Score=162.56  Aligned_cols=213  Identities=12%  Similarity=0.007  Sum_probs=150.8

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+  |+||++++++|+++| ++|++++|+.. ..+...+... ...+.++.+|+++.+..           
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREG-AQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcC-CEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35799999999  999999999999999 99999998642 1122222211 12467899999986432           


Q ss_pred             -CCCEEEEcccCCCc--------cccccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                       ++|+|||+||....        ....+++...+++|+.++.++++++...    +.++|++||...+.           
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~-----------  166 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK-----------  166 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS-----------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc-----------
Confidence             68999999997643        1223456788999999999999988654    24899999987653           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++..... . .............++        
T Consensus       167 -----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~-~~~~~~~~~~~~~p~--------  231 (285)
T 2p91_A          167 -----VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-T-GFHLLMEHTTKVNPF--------  231 (285)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-T-THHHHHHHHHHHSTT--------
T ss_pred             -----CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-c-chHHHHHHHHhcCCC--------
Confidence                 12233579999999999999887764   79999999999999863211 1 112222222221111        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                       ..+.+++|+|++++.++....    +..+++.++.
T Consensus       232 -~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          232 -GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             -SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             -CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence             136789999999999886432    4467777764

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.86  E-value=3e-21  Score=164.98  Aligned_cols=198  Identities=14%  Similarity=0.093  Sum_probs=145.2

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ...|+|+||||||+|+||++++++|+++| ++|++++|+.....           ...+.+|+.+.+..           
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKS-WNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            34567899999999999999999999999 99999999653221           13466777775322           


Q ss_pred             -CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       ++|+|||+||.....     ...+++...+++|+.++.++++++...-   .++|++||...+.               
T Consensus        86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------  150 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN---------------  150 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS---------------
T ss_pred             CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc---------------
Confidence             589999999965432     2335567888999999999999887642   3899999988763               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +..+...|+.+|.+.+.+.+.++.+     .++++.+++||.+..+.            .......         ....
T Consensus       151 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~------------~~~~~~~---------~~~~  208 (251)
T 3orf_A          151 -RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT------------NRKYMSD---------ANFD  208 (251)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH------------HHHHCTT---------SCGG
T ss_pred             -CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc------------hhhhccc---------cccc
Confidence             2334467999999999999998877     47899999999887642            1111111         1223


Q ss_pred             ecccHHHHHHHHHHHHhC-C--C--CCcEEecCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEG-E--N--TGPINIGNPGEF  274 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~-~--~--~~~~~~~~~~~~  274 (346)
                      .+++++|+|++++.++.. .  .  +..+++.+++..
T Consensus       209 ~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          209 DWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             GSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             ccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            578999999999999987 2  2  456777765543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.86  E-value=5e-21  Score=165.56  Aligned_cols=212  Identities=9%  Similarity=0.021  Sum_probs=149.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|......+.+...+.  ..++.++.+|+++....            
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMG-LKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999 9999999854333222222221  24688999999987432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|+|||+||......    ..++....+++|+.++..+++++.    +.+. ++|++||...+.               
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  171 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGER---------------  171 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------------
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcC---------------
Confidence            6999999999765432    234567888999999988877663    3344 899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|.+.+.+.+.++.+   .++++.+++||.+..+....    ........         .........+
T Consensus       172 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~---------~~~~~~~~~~  237 (271)
T 4iin_A          172 -GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN----LKDELKAD---------YVKNIPLNRL  237 (271)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------------CGGGCTTCSC
T ss_pred             -CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh----hcHHHHHH---------HHhcCCcCCC
Confidence             2233467999999999999988876   47899999999998764211    11111110         0111122357


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+++|+|++++.++..+.    +..+++.+|.
T Consensus       238 ~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          238 GSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            899999999999987543    5577777764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.86  E-value=2.7e-20  Score=162.62  Aligned_cols=220  Identities=10%  Similarity=0.035  Sum_probs=150.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.......... + ..++.++.+|+++.+..        ++|+||
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRG-ATVIMAVRDTRKGEAAART-M-AGQVEVRELDLQDLSSVRRFADGVSGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHTT-S-SSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-h-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            46899999999999999999999999 9999999864322221111 1 24688999999987532        589999


Q ss_pred             EcccCCCcc--ccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCC-CCCCCCCCcCCCCCCCCCCchHH
Q 019060          103 HLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPL-VHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       103 ~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~-~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      |+||...+.  ...++++..+++|+.++..+++++..... |+|++||...+.... .....++    ..+..+...|+.
T Consensus        92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~----~~~~~~~~~Y~~  167 (291)
T 3rd5_A           92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWR----SRRYSPWLAYSQ  167 (291)
T ss_dssp             ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCS----SSCCCHHHHHHH
T ss_pred             ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccccccc----ccCCCCcchHHH
Confidence            999976532  24567788999999999999999987765 899999988764321 1111111    123445567999


Q ss_pred             hHHHHHHHHHHHHHHh---C--CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQH---G--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~---~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      +|.+.+.+.+.++.+.   +  +++++++||.+..+.....    ...+... ....        ...+-..+++|+|+.
T Consensus       168 sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~----~~~~~~~-~~~~--------~~~~~~~~~~~~A~~  234 (291)
T 3rd5_A          168 SKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS----GRKLGDA-LMSA--------ATRVVATDADFGARQ  234 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------------CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc----chHHHHH-HHHH--------HHHHHhCCHHHHHHH
Confidence            9999999999887764   4  8999999999987753211    0111111 1000        011223468999999


Q ss_pred             HHHHHhCCC-CCc-EEecC
Q 019060          254 LIRLMEGEN-TGP-INIGN  270 (346)
Q Consensus       254 i~~~~~~~~-~~~-~~~~~  270 (346)
                      ++.++..+. .|. +.+.+
T Consensus       235 ~~~l~~~~~~~G~~~~vdg  253 (291)
T 3rd5_A          235 TLYAASQDLPGDSFVGPRF  253 (291)
T ss_dssp             HHHHHHSCCCTTCEEEETT
T ss_pred             HHHHHcCCCCCCceeCCcc
Confidence            999988754 454 44443

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.86  E-value=7.2e-21  Score=162.12  Aligned_cols=200  Identities=17%  Similarity=0.220  Sum_probs=130.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----------CCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~d   99 (346)
                      .++++|||||+|+||++++++|++ | +.|++++|+.    +.........++.++.+|+.+...           .++|
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g-~~v~~~~r~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-D-HIVYALGRNP----EHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-T-SEEEEEESCH----HHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-C-CeEEEEeCCH----HHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999999987 8 8999999853    223333334578889999887521           1599


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +|||+||......    ..++....+++|+.++..+++++    ++.+.++|++||...+.                +..
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~  141 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG----------------PHP  141 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-------------------------
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc----------------CCC
Confidence            9999999765432    23456678899999988777765    34456899999988764                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      +...|+.+|.+.+.+.+.++.+   .++++++++||.+.++...        .+....  +.       ......+++++
T Consensus       142 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~~~~~~--~~-------~~~~~~~~~p~  204 (245)
T 3e9n_A          142 GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ--------GLMDSQ--GT-------NFRPEIYIEPK  204 (245)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------CCGGGSCHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh--------hhhhhh--hc-------ccccccCCCHH
Confidence            3467999999999999988876   4799999999999886421        111100  00       01123578999


Q ss_pred             HHHHHHHHHHhCCC-CCcEEec
Q 019060          249 DMVDGLIRLMEGEN-TGPINIG  269 (346)
Q Consensus       249 Dva~~i~~~~~~~~-~~~~~~~  269 (346)
                      |+|++++.+++.+. .+++++.
T Consensus       205 dvA~~i~~l~~~~~~~~~~~i~  226 (245)
T 3e9n_A          205 EIANAIRFVIDAGETTQITNVD  226 (245)
T ss_dssp             HHHHHHHHHHTSCTTEEEEEEE
T ss_pred             HHHHHHHHHHcCCCccceeeeE
Confidence            99999999998776 4456654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.86  E-value=4.9e-21  Score=166.10  Aligned_cols=217  Identities=12%  Similarity=0.086  Sum_probs=152.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+...++.  ...++.++.+|+++.+..            
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHG-CHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999999986432222222221  124688999999997432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++.++++++..    .+ .++|++||...+.               
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  169 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR---------------  169 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHH---------------
T ss_pred             CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCC---------------
Confidence            6999999999654322    3345678899999999999988732    23 3899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +......|+.+|...+.+.+.++.+.   ++++.+++||.+.++........ ............++         ..+
T Consensus       170 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~p~---------~r~  238 (277)
T 4fc7_A          170 -GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG-PQASLSTKVTASPL---------QRL  238 (277)
T ss_dssp             -TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC-CHHHHHHHHHTSTT---------SSC
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC-CHHHHHHHhccCCC---------CCC
Confidence             22233579999999999999888774   78999999999998631000000 01122222222221         246


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..++|+|++++.++....    +..+++.+|..+
T Consensus       239 ~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          239 GNKTEIAHSVLYLASPLASYVTGAVLVADGGAWL  272 (277)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             cCHHHHHHHHHHHcCCccCCcCCCEEEECCCccc
Confidence            789999999999997532    557888776543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=2.9e-21  Score=169.06  Aligned_cols=232  Identities=13%  Similarity=0.065  Sum_probs=159.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CC---CeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~d~~~~~~~----------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..........+.. ..   ++.++.+|+++.+..          
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEG-AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999 9999999864222211111111 12   678899999987432          


Q ss_pred             --CCCEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 --EVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                        ++|+|||+||......      ..+++...+++|+.++.++++++..    .+.++|++||...+...          
T Consensus       104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~----------  173 (297)
T 1xhl_A          104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA----------  173 (297)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC----------
T ss_pred             cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCC----------
Confidence              6999999999654322      2345677899999999998887654    23589999998776321          


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-ccH----HHHHHHHHHcCCCeEEec
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRV----VSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~  236 (346)
                           ..+...|+.+|...+.+.+.++.+   .++++++++||.+.++...... ...    .........  ..+    
T Consensus       174 -----~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~----  242 (297)
T 1xhl_A          174 -----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRK--ECI----  242 (297)
T ss_dssp             -----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT--TTC----
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHH--hcC----
Confidence                 022357999999999999988765   4899999999999887421000 000    001111111  111    


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCCCCCHHHHHHHHHHHc
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPGEFTMLELAENVKELI  287 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~~~s~~ei~~~i~~~~  287 (346)
                         ....+..++|+|++++.++..+    . +..+++.+|..+.+.+.+..+.+.+
T Consensus       243 ---p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~  295 (297)
T 1xhl_A          243 ---PVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL  295 (297)
T ss_dssp             ---TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred             ---CCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence               1124789999999999988654    2 5578888887777666555555443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.86  E-value=4.9e-20  Score=156.91  Aligned_cols=208  Identities=16%  Similarity=0.120  Sum_probs=147.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+..    .........++.++.+|+++.+..            ++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G-~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEG-ARLVACDIEEG----PLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHH----HHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 99999998532    222211111378899999987432            49


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||......    ..++....+++|+.++..+++++..    .+. ++|++||...++.                
T Consensus        79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------  142 (245)
T 1uls_A           79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN----------------  142 (245)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC----------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC----------------
Confidence            99999999754322    2245667889999999999887754    244 8999999884331                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                       .....|+.+|...+.+.+.++.+.   ++++++++||.+..+..... .   ...........+.         ..+.+
T Consensus       143 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~p~---------~~~~~  208 (245)
T 1uls_A          143 -LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P---EKVREKAIAATPL---------GRAGK  208 (245)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C---HHHHHHHHHTCTT---------CSCBC
T ss_pred             -CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc-C---HHHHHHHHhhCCC---------CCCcC
Confidence             123569999999999998887663   79999999999988753211 1   1122222211111         13778


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++|+|++++.++..+.    +..+.+.+|..
T Consensus       209 ~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          209 PLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            9999999999987532    44677777643

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.86  E-value=3e-20  Score=160.31  Aligned_cols=208  Identities=16%  Similarity=0.095  Sum_probs=149.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+....         ......+.+|+++.+..            ++
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYG-AKVVSVSLDEKSD---------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCC--C---------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCchhc---------cCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 9999999864322         12567889999997532            69


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||.......    .++....+++|+.++..+++++..    .+. ++|++||...+.                +
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  146 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYA----------------A  146 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------B
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhcc----------------C
Confidence            999999997654322    234567788999999998887543    444 899999998764                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCC-------CCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNI-------DDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                      ......|+.+|...+.+.+.++.+.  ++++.+++||.+.++....       .................         .
T Consensus       147 ~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------p  217 (269)
T 3vtz_A          147 TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH---------P  217 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS---------T
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC---------C
Confidence            2334679999999999999998876  7899999999998763100       00000111222211111         1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ...+.+++|+|++++.++....    +..+++.+|..
T Consensus       218 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          218 MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcc
Confidence            1356789999999999987543    55788887643

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.86  E-value=7.9e-21  Score=166.61  Aligned_cols=239  Identities=15%  Similarity=0.079  Sum_probs=153.7

Q ss_pred             CCCCCCCCCCCCCChhhhhhccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--------Ccchhhhh--
Q 019060            8 GNHNSASKPPPTPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDNLRKW--   77 (346)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~~~~~~~--   77 (346)
                      ++|-+.+.+++.|..   +.....++++|||||+|+||++++++|++.| +.|++++|+...        ..+.+.+.  
T Consensus         7 ~~~~~~~~~~~~p~~---m~~~l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (299)
T 3t7c_A            7 HHMGTLEAQTQGPGS---MAGKVEGKVAFITGAARGQGRSHAITLAREG-ADIIAIDVCKQLDGVKLPMSTPDDLAETVR   82 (299)
T ss_dssp             ------------------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCCSCCCCHHHHHHHHH
T ss_pred             ccccceeccCCCCcc---cccccCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEecccccccccccccCHHHHHHHHH
Confidence            445555544444432   1222346899999999999999999999999 999999986321        11221111  


Q ss_pred             -c--CCCCeeEEecccCCcccC------------CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHH
Q 019060           78 -I--GHPRFELIRHDVTEPLLI------------EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR  137 (346)
Q Consensus        78 -~--~~~~~~~~~~d~~~~~~~------------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~  137 (346)
                       +  ...++.++.+|+++.+..            ++|++|||||......     ..+++...+++|+.++..+++++..
T Consensus        83 ~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  162 (299)
T 3t7c_A           83 QVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP  162 (299)
T ss_dssp             HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence             1  124688999999997532            6999999999765332     3355678999999999999887643


Q ss_pred             c----C--CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccC
Q 019060          138 V----G--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYG  208 (346)
Q Consensus       138 ~----~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G  208 (346)
                      .    +  .++|++||...+.                +......|+.+|...+.+.+.++.+.   ++++.+++||.+..
T Consensus       163 ~~~~~~~~g~Iv~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T  226 (299)
T 3t7c_A          163 HIMAGKRGGSIVFTSSIGGLR----------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVAT  226 (299)
T ss_dssp             HHHHTTSCEEEEEECCGGGTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSS
T ss_pred             HHHhcCCCcEEEEECChhhcc----------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccC
Confidence            2    2  3899999988753                22334579999999999999988775   79999999999998


Q ss_pred             CCCCCCC----------ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          209 PRMNIDD----------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       209 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      +......          ................+       . ..+..++|+|++++.++....    +..+++.+|..+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          227 PMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL-------P-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             TTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS-------S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccccccchhhhhhhhhccchhhHHHHHhhhhccc-------C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            8532100          00000000000000000       1 347789999999999997543    557888776543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.86  E-value=3e-21  Score=168.45  Aligned_cols=235  Identities=15%  Similarity=0.123  Sum_probs=157.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC--------cchhhhh-----cCCCCeeEEecccCCcccC-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS--------KDNLRKW-----IGHPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~--------~~~~~~~-----~~~~~~~~~~~d~~~~~~~-   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+....        ...+.+.     ....++.++.+|+.+.+.. 
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            36899999999999999999999999 9999999863211        1111110     1134688999999997543 


Q ss_pred             -----------CCCEEEEcccCCCcc--ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCC
Q 019060           97 -----------EVDQIYHLACPASPI--FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 -----------~~d~vi~~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~  160 (346)
                                 ++|++||+||.....  ...+++...+++|+.++.++++++...   +.++|++||...+......+..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  167 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA  167 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence                       699999999976543  234567789999999999999998764   2389999998765432222222


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe-----
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL-----  232 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~-----  232 (346)
                      +.     .+..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+....   ......+.........     
T Consensus       168 ~~-----~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~~  239 (287)
T 3pxx_A          168 GG-----PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS---APMYRQFRPDLEAPSRADALL  239 (287)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS---HHHHHHHCTTSSSCCHHHHHH
T ss_pred             cc-----cCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc---cchhhhhccccccchhHHHHh
Confidence            22     122334579999999999999988775   8999999999999886321   0000000000000000     


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ...........+.+++|+|++++.++....    +..+++.+|..+
T Consensus       240 ~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          240 AFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             HGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            000000111468899999999999986542    557888887554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.86  E-value=1.8e-20  Score=162.42  Aligned_cols=213  Identities=12%  Similarity=0.007  Sum_probs=151.7

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+  |+||++++++|+++| ++|++++|+.. ..+...+... ...+.++.+|+++.+..           
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G-~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCC-CEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            36899999999  999999999999999 99999999753 2222222211 12478899999986432           


Q ss_pred             -CCCEEEEcccCCCc--------cccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||....        ....+++...+++|+.++..+++++...   +.++|++||...+.            
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  150 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------  150 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC------------
Confidence             58999999997643        1223456788999999999999998765   34899999977642            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|...+.+.+.++.+.   ++++++++||.+.++..... . .............++         
T Consensus       151 ----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~~p~---------  215 (275)
T 2pd4_A          151 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-A-DFRMILKWNEINAPL---------  215 (275)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-T-THHHHHHHHHHHSTT---------
T ss_pred             ----CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-c-ccHHHHHHHHhcCCc---------
Confidence                12233569999999999999887775   79999999999998753211 1 112222222221111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ..+.+++|+|++++.++....   .| .+++.++.
T Consensus       216 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          216 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            135688999999999986432   34 56776654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.85  E-value=4.6e-21  Score=165.59  Aligned_cols=215  Identities=14%  Similarity=0.070  Sum_probs=153.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      ..++++|||||+|+||++++++|+++| ++|++++|+.....+...++.. ..++.++.+|+++.+..            
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAG-ARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            346899999999999999999999999 9999998854322222222211 24688899999997432            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+.               
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~---------------  167 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSEL---------------  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS---------------
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCC---------------
Confidence            6999999999764332    3345677899999999999776543    344 899999987642               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +..+...|+.+|...+.+.+.++.+   .++++.+++||.+..+...    ...  +.+........++         .
T Consensus       168 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~p~---------~  233 (271)
T 4ibo_A          168 -ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ----ALIDNPEFDAWVKARTPA---------K  233 (271)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHHCHHHHHHHHHHSTT---------C
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchh----hcccCHHHHHHHHhcCCC---------C
Confidence             2233467999999999999998876   4799999999999887421    111  1122222222221         2


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      .+..++|+|++++.++....    +..+++.+|...
T Consensus       234 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          234 RWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeec
Confidence            46788999999999887543    557888877544

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.85  E-value=4e-20  Score=158.05  Aligned_cols=203  Identities=14%  Similarity=0.126  Sum_probs=145.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++++||||||+|+||++++++|+++| ++|++++|+....          ..+.++.+|+.+.+..            ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~----------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i   88 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAG-DKVAITYRSGEPP----------EGFLAVKCDITDTEQVEQAYKEIEETHGPV   88 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSCCC----------TTSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHhh----------ccceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 9999999854221          1367899999987432            48


Q ss_pred             CEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |+|||+||.....    ...+++...+++|+.++.++++++..    .+. ++|++||...+.                +
T Consensus        89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~  152 (253)
T 2nm0_A           89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL----------------G  152 (253)
T ss_dssp             SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCC----------------C
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCC----------------C
Confidence            9999999975432    23467888999999999998886643    344 899999986542                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+.   ++++++++||.+..+....    +............         ....+++
T Consensus       153 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~---------p~~~~~~  219 (253)
T 2nm0_A          153 SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV----LTDEQRANIVSQV---------PLGRYAR  219 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTC---------TTCSCBC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh----cCHHHHHHHHhcC---------CCCCCcC
Confidence            1123569999999999999888764   6899999999987764211    0011111111111         1124789


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .+|+|++++.++..+.    +..+.+.+|..
T Consensus       220 p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          220 PEEIAATVRFLASDDASYITGAVIPVDGGLG  250 (253)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhCccccCCcCcEEEECCccc
Confidence            9999999999987542    44677777654

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.85  E-value=3.7e-21  Score=170.46  Aligned_cols=226  Identities=15%  Similarity=0.055  Sum_probs=160.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC---------CCCcchhhhhc--CCCCeeEEecccCCcccC---
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF---------TGSKDNLRKWI--GHPRFELIRHDVTEPLLI---   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~---------~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~---   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.         ....+.....+  ...++.++.+|+++.+..   
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEG-ARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            36799999999999999999999999 9999998851         11111111111  124678899999997542   


Q ss_pred             ---------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEecccccC
Q 019060           97 ---------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----------GARILLTSTSEVYG  152 (346)
Q Consensus        97 ---------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~r~i~~SS~~v~~  152 (346)
                               ++|++||+||......    ..+++...+++|+.++..+++++...           +.++|++||...+.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~  184 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ  184 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence                     6999999999765432    23456788999999999998876432           13899999987652


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC
Q 019060          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG  229 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~  229 (346)
                                      +......|+.+|.+.+.+.+.++.+   .++++.+++|| +..+..........          
T Consensus       185 ----------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~----------  237 (322)
T 3qlj_A          185 ----------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM----------  237 (322)
T ss_dssp             ----------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------
T ss_pred             ----------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh----------
Confidence                            2223357999999999999998877   47899999999 65543221111100          


Q ss_pred             CCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC-----------------CCHHHHHHHHHHHcC
Q 019060          230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE-----------------FTMLELAENVKELIN  288 (346)
Q Consensus       230 ~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~-----------------~s~~ei~~~i~~~~g  288 (346)
                            ......+.++.++|+|++++.++....    +..+++.+|..                 ++..|+++.+.+.+|
T Consensus       238 ------~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~  311 (322)
T 3qlj_A          238 ------ATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG  311 (322)
T ss_dssp             ------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred             ------hccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence                  011122356789999999999886543    45677777653                 378999999999987


Q ss_pred             CC
Q 019060          289 PN  290 (346)
Q Consensus       289 ~~  290 (346)
                      .+
T Consensus       312 ~~  313 (322)
T 3qlj_A          312 KA  313 (322)
T ss_dssp             HS
T ss_pred             cc
Confidence            54

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.85  E-value=9.6e-21  Score=164.71  Aligned_cols=214  Identities=19%  Similarity=0.167  Sum_probs=151.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------EVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~d   99 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+.... + ..++.++.+|+++.+..           ++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G-~~Vi~~~r~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADG-LGVVIADLAAEKGKALADE-L-GNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-H-CTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHH-h-CCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            46789999999999999999999999 9999999864322221122 2 24689999999986432           589


Q ss_pred             EEEEc-ccCCCcc---------ccccChHHHHHHHHHHHHHHHHHHHH----------cC-CeEEEEecccccCCCCCCC
Q 019060          100 QIYHL-ACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKR----------VG-ARILLTSTSEVYGDPLVHP  158 (346)
Q Consensus       100 ~vi~~-a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----------~~-~r~i~~SS~~v~~~~~~~~  158 (346)
                      ++||+ |+.....         ...+++...+++|+.++.++++++..          .+ .++|++||...+.      
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  179 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE------  179 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS------
T ss_pred             eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC------
Confidence            99999 4433221         11233578889999999999887642          12 3899999988763      


Q ss_pred             CCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe
Q 019060          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
                                +......|+.+|.+.+.+.+.++.+.   ++++++++||.+..+....    .............+..  
T Consensus       180 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~~--  243 (281)
T 3ppi_A          180 ----------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES----VGEEALAKFAANIPFP--  243 (281)
T ss_dssp             ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT----TCHHHHHHHHHTCCSS--
T ss_pred             ----------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc----ccHHHHHHHHhcCCCC--
Confidence                      22334679999999999999887764   7899999999997653211    1122222222222211  


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s  275 (346)
                            ..+.+++|+|++++.++....  +..+++.+|..++
T Consensus       244 ------~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          244 ------KRLGTPDEFADAAAFLLTNGYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             ------SSCBCHHHHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred             ------CCCCCHHHHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence                  357899999999999998654  5578888877654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.85  E-value=1.1e-20  Score=162.24  Aligned_cols=211  Identities=17%  Similarity=0.164  Sum_probs=149.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------EVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------~~d   99 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|..    +...... ...+.++.+|+++.+..           ++|
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~----~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAG-AQVVVLDIRG----EDVVADL-GDRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSC----HHHHHHT-CTTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCch----HHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999 9999999832    2222222 34688999999987432           699


Q ss_pred             EEEEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc------------CC-eEEEEecccccCCCCCCC
Q 019060          100 QIYHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV------------GA-RILLTSTSEVYGDPLVHP  158 (346)
Q Consensus       100 ~vi~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~------------~~-r~i~~SS~~v~~~~~~~~  158 (346)
                      ++||+||.....        ...+++...+++|+.++..+++++...            +. ++|++||...+.      
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  155 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD------  155 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C------
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC------
Confidence            999999965422        233557788999999999998887542            22 899999987652      


Q ss_pred             CCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEe
Q 019060          159 QDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQ  235 (346)
Q Consensus       159 ~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (346)
                                +..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+....    .............+.   
T Consensus       156 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~---  218 (257)
T 3tl3_A          156 ----------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS----LPEEARASLGKQVPH---  218 (257)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-------CHHHHHHHHHTSSS---
T ss_pred             ----------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh----ccHHHHHHHHhcCCC---
Confidence                      22233579999999999999887763   7899999999998875321    112222222222111   


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFT  275 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s  275 (346)
                           ...+.+++|+|++++.+++.+.  +..+++.+|..++
T Consensus       219 -----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          219 -----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             -----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred             -----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence                 0247789999999999998754  5578888776544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.85  E-value=8.5e-21  Score=162.52  Aligned_cols=216  Identities=16%  Similarity=0.103  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |++++|||||+|+||++++++|+++|. +.|++++|+..... .+.+.. ..++.++.+|+++.+..            +
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLK-KLKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHH-HHHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHH-HHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999862 78888888532211 121212 23688999999997532            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||...+ .    ...+++...+++|+.++..+++++    ++.+.++|++||...+.                
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~----------------  142 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNM----------------  142 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCC----------------
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhcc----------------
Confidence            9999999997543 1    133456778999999999998887    55556999999987653                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh-CCceEEEEeccccCCCCCCCCcc-----HHHHHHHHHHcCCCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGR-----VVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                      +..+...|+.+|...+.+.+.++.+. ++++..++||.+..+........     .-...........+         ..
T Consensus       143 ~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~  213 (254)
T 3kzv_A          143 YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------NN  213 (254)
T ss_dssp             SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT---------TC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh---------cC
Confidence            22334679999999999999988774 79999999999988754321110     01122222211111         12


Q ss_pred             ecccHHHHHHHHHHHHhCC-C----CCcEEecCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGE-N----TGPINIGNPGE  273 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~-~----~~~~~~~~~~~  273 (346)
                      .+.+++|+|++++.++... .    +..+++.+++.
T Consensus       214 r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~~  249 (254)
T 3kzv_A          214 QLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPAL  249 (254)
T ss_dssp             ----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGGG
T ss_pred             CcCCcccHHHHHHHHHhhcccCCCCccEEEecCccc
Confidence            4678899999999988765 2    44566666543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.85  E-value=3.8e-20  Score=159.82  Aligned_cols=212  Identities=18%  Similarity=0.109  Sum_probs=151.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|......+.....+  ...++.++.+|+++.+..            
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEG-AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999998765322222222211  124688899999997532            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++...   +.++|++||.....               .+
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~---------------~~  173 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL---------------VP  173 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC---------------CC
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc---------------CC
Confidence            6999999999764332    33456788999999999999988754   34899999865431               12


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+..... .....    ......+.         ..+..
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~----~~~~~~~~---------~r~~~  239 (271)
T 3v2g_A          174 WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-GDHAE----AQRERIAT---------GSYGE  239 (271)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS-CSSHH----HHHHTCTT---------SSCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc-chhHH----HHHhcCCC---------CCCCC
Confidence            2334679999999999999888774   79999999999998764321 11111    11111111         23668


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++|+|++++.++....    +..+++.+|.
T Consensus       240 pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          240 PQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            8999999999886432    4567777654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.85  E-value=3.6e-20  Score=161.02  Aligned_cols=220  Identities=15%  Similarity=0.089  Sum_probs=150.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+...++.. ...+.++.+|+++.+..            +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADG-VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999 9999999864322222222211 24678899999997432            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||.... .    ...+++...+++|+.++..+++++    ++.+. ++|++||...+..              
T Consensus       106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~--------------  171 (283)
T 3v8b_A          106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRT--------------  171 (283)
T ss_dssp             CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTB--------------
T ss_pred             CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccC--------------
Confidence            9999999997532 1    123456788999999999999887    45554 9999999875421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce--e
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT--R  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  242 (346)
                      .+..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+.........  .    ................  .
T Consensus       172 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--~----~~~~~~~~~~~~~~p~~~~  245 (283)
T 3v8b_A          172 FTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRH--E----EETAIPVEWPKGQVPITDG  245 (283)
T ss_dssp             CCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCC--H----HHHSCCCBCTTCSCGGGTT
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccccccc--c----hhhhhhhhhhhhcCccccC
Confidence            122234679999999999999998773   689999999999887533211100  0    0000001100010111  3


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+..++|+|++++.++....    +..+++.+|
T Consensus       246 r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          246 QPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            46789999999999887543    446777665

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.85  E-value=4.8e-20  Score=158.99  Aligned_cols=214  Identities=11%  Similarity=0.001  Sum_probs=153.4

Q ss_pred             CCCEEEEEcCchh--HHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~---------   96 (346)
                      .++++|||||+|+  ||++++++|+++| ++|++++|+.. ..+...+.   ....++.++.+|+++.+..         
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAG-ARLIFTYAGER-LEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEecCchH-HHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            4689999999988  9999999999999 99999988632 22222222   2223689999999997543         


Q ss_pred             ---CCCEEEEcccCCCc----c----ccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASP----I----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~----~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                         ++|++||+||....    .    ...++....+++|+.++..+++++...-   .++|++||...+.          
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------  153 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL----------  153 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------
T ss_pred             HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc----------
Confidence               59999999997642    1    1234556788999999999999987652   3899999987653          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+.......  ............++       
T Consensus       154 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~-------  218 (266)
T 3oig_A          154 ------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISD--FNSILKDIEERAPL-------  218 (266)
T ss_dssp             ------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTT--HHHHHHHHHHHSTT-------
T ss_pred             ------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccc--hHHHHHHHHhcCCC-------
Confidence                  22234579999999999999888764   7899999999998864322111  12222222222211       


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                        ..+.+++|+|++++.++....    +..+++.+|-.
T Consensus       219 --~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          219 --RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             --SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence              246788999999999997532    45677777643

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.85  E-value=2.2e-20  Score=159.24  Aligned_cols=203  Identities=15%  Similarity=0.118  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.....          .+..+.+|+++.+..            ++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   82 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADG-HKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDRAFTAVEEHQGPV   82 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSSCCCT----------TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHH----------HhcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999998643211          122478999986432            58


Q ss_pred             CEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||.....    ...+++...+++|+.++.++++++..    .+. ++|++||...+..                
T Consensus        83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------  146 (247)
T 1uzm_A           83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG----------------  146 (247)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------------
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC----------------
Confidence            9999999975432    12345678889999999999887643    454 8999999865421                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ..+...|+.+|...+.+.+.++.+   .++++++++||.+.++...    .+............         ....+.+
T Consensus       147 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~----~~~~~~~~~~~~~~---------p~~~~~~  213 (247)
T 1uzm_A          147 IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFI---------PAKRVGT  213 (247)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGC---------TTCSCBC
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh----hcCHHHHHHHHhcC---------CCCCCcC
Confidence            122357999999999999988776   4789999999999765311    00011111111111         1124789


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++|+|++++.++..+.    +..+++.+|..
T Consensus       214 ~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          214 PAEVAGVVSFLASEDASYISGAVIPVDGGMG  244 (247)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHcCccccCCcCCEEEECCCcc
Confidence            9999999999987532    45688877654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.85  E-value=1.3e-20  Score=163.99  Aligned_cols=213  Identities=12%  Similarity=0.089  Sum_probs=149.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~--------   96 (346)
                      .++++|||||+|+||++++++|+++| +   .|++++|+.....+.....   ....++.++.+|+++.+..        
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G-~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEAS-NGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcC-CCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999998 6   8999988543222111111   1134688899999997543        


Q ss_pred             ----CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCC
Q 019060           97 ----EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                          ++|++||+||.....     ...+++...+++|+.++..+++++    ++.+ .++|++||...+.          
T Consensus       111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------  180 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRD----------  180 (287)
T ss_dssp             GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------
T ss_pred             HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcC----------
Confidence                599999999965421     133556788999999999999887    3344 4999999987652          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+   .++++++++||.+..+......... ..........          
T Consensus       181 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~----------  243 (287)
T 3rku_A          181 ------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGN-EEQAKNVYKD----------  243 (287)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTC-HHHHHHHHTT----------
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCc-HHHHHHhhcc----------
Confidence                  2233467999999999999999887   4799999999999876310000000 0111111111          


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                        ..++.++|+|++++.++..+.    ++.+.+.+++.
T Consensus       244 --~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          244 --TTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             --SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred             --cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence              123378999999999998765    45677776654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.85  E-value=6.5e-20  Score=158.28  Aligned_cols=217  Identities=9%  Similarity=-0.018  Sum_probs=153.9

Q ss_pred             cCCCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhhhcC--CCCeeEEecccCCcccC-------
Q 019060           29 FQSNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRKWIG--HPRFELIRHDVTEPLLI-------   96 (346)
Q Consensus        29 ~~~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~d~~~~~~~-------   96 (346)
                      ...++++|||||+  |+||++++++|+++| +.|++++|+.... .+...+...  ..++.++.+|+.+.+..       
T Consensus        17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           17 SLKGKVVVVTGASGPKGMGIEAARGCAEMG-AAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             CCTTCEEEETTCCSSSSHHHHHHHHHHHTS-CEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCCCChHHHHHHHHHHCC-CeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            3457899999999  999999999999999 9999998865443 222222211  34788999999997532       


Q ss_pred             -----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCC
Q 019060           97 -----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 -----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                           ++|+|||+||......    ..+++...+++|+.++.++++++    ++.+. ++|++||...+..         
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------  166 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA---------  166 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC---------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccccc---------
Confidence                 5899999999765432    33456778999999999998877    44443 9999999876432         


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           ....+...|+.+|...+.+.+.++.+..  +++..+.||.+..+....    .............         .
T Consensus       167 -----~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~----~~~~~~~~~~~~~---------~  228 (267)
T 3gdg_A          167 -----NFPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF----VPKETQQLWHSMI---------P  228 (267)
T ss_dssp             -----CSSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG----SCHHHHHHHHTTS---------T
T ss_pred             -----CCCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh----CCHHHHHHHHhcC---------C
Confidence                 1112346799999999999999988754  688999999988764221    1122222222221         1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ...+.+++|+|++++.++....    +..+++.+|..
T Consensus       229 ~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          229 MGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             TSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            1346788999999999987543    45678777643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.85  E-value=2e-20  Score=161.22  Aligned_cols=215  Identities=17%  Similarity=0.113  Sum_probs=145.6

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC---------
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~---------   96 (346)
                      ++..++++|||||+|+||++++++|+++| +.|+++++......+.+...+  ...++.++.+|+++.+..         
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  101 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDG-FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEE  101 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHT-CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34456899999999999999999999999 999888654332222222221  124688899999997532         


Q ss_pred             ---CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 ---EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                         ++|++||+||.......    .++.+..+++|+.++.++++++...   +.++|++||...+.              
T Consensus       102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  167 (267)
T 3u5t_A          102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL--------------  167 (267)
T ss_dssp             HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH--------------
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc--------------
Confidence               69999999997653332    2345677889999999999887653   23899999987653              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.....   .............         ....
T Consensus       168 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~---------p~~r  233 (267)
T 3u5t_A          168 --LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG---KSDEVRDRFAKLA---------PLER  233 (267)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTSS---------TTCS
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc---CCHHHHHHHHhcC---------CCCC
Confidence              22233579999999999999998875   78999999999987642110   0011111112111         1235


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +..++|+|++++.++....    +..+++.+|
T Consensus       234 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          234 LGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             CBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            7789999999999987543    345666654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.85  E-value=2.6e-20  Score=161.59  Aligned_cols=222  Identities=18%  Similarity=0.128  Sum_probs=151.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC---------CCcchhhhh---c--CCCCeeEEecccCCcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT---------GSKDNLRKW---I--GHPRFELIRHDVTEPLLI   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~---------~~~~~~~~~---~--~~~~~~~~~~d~~~~~~~   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|...         ...+.+.+.   .  ....+.++.+|+.+.+..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEG-ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            46899999999999999999999999 99999988421         011222111   1  134688899999997532


Q ss_pred             ------------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCC
Q 019060           97 ------------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDP  154 (346)
Q Consensus        97 ------------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~  154 (346)
                                  ++|++||+||......    ..+++...+++|+.++..+++++.    +.+  .++|++||...+.  
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--  166 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--  166 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC--
Confidence                        5999999999765432    334567889999999999888753    333  3899999988753  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCC
Q 019060          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP  231 (346)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~  231 (346)
                                    +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+...   ................
T Consensus       167 --------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~  229 (277)
T 3tsc_A          167 --------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGS---GDMVTAVGQAMETNPQ  229 (277)
T ss_dssp             --------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGS---HHHHHHHHHHHHTCGG
T ss_pred             --------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCccc---chhhhhhhhcccccHH
Confidence                          22233579999999999999888774   789999999999887421   1111111111111110


Q ss_pred             eEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       232 ~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ............+.+++|+|++++.++....    +..+++.+|.
T Consensus       230 ~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          230 LSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             GTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            0000001111247899999999999987543    4567777754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.85  E-value=4.3e-20  Score=157.82  Aligned_cols=202  Identities=9%  Similarity=-0.006  Sum_probs=135.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------~   97 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+.....+....+.. ..++.++.+|+++.+..           +
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEG-FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            346899999999999999999999999 9999999965433322222211 24688999999997432           6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..++....+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  147 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLR----------------  147 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTC----------------
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcC----------------
Confidence            899999999765422    23456778899999999888776    44444 899999987652                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCce-EEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEI-RIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      +......|+.+|...+.+.+.++.+.   ++++ .+++||.+..+....    ........      .   ....... +
T Consensus       148 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~----~~~~~~~~------~---~~~~~~~-~  213 (252)
T 3h7a_A          148 GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE----RREQMFGK------D---ALANPDL-L  213 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc----cchhhhhh------h---hhcCCcc-C
Confidence            22234679999999999999888764   6888 789999887664211    11111100      0   0111122 8


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~  262 (346)
                      ..++|+|++++.++..+.
T Consensus       214 ~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          214 MPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             CCHHHHHHHHHHHHHCCG
T ss_pred             CCHHHHHHHHHHHHhCch
Confidence            899999999999998665

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.85  E-value=1.4e-20  Score=160.36  Aligned_cols=211  Identities=17%  Similarity=0.147  Sum_probs=149.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+.... + ..++.++.+|+++.+..            ++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADG-ATVIVSDINAEGAKAAAAS-I-GKKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHH-H-CTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHH-h-CCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            46899999999999999999999999 9999999864322222222 2 34688999999997532            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHH----HHHcC-C-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGL----AKRVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~----~~~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||......    ..+++...+++|+.++.++.++    +++.+ . ++|++||...+.                
T Consensus        82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  145 (247)
T 3rwb_A           82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA----------------  145 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH----------------
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc----------------
Confidence            99999999764322    2345678899999999998887    55544 3 899999987653                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+   .++++.+++||.+..+............+....   .+         ...+.
T Consensus       146 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~---------~~r~~  213 (247)
T 3rwb_A          146 GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA---------MKGKG  213 (247)
T ss_dssp             TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS---------SCSCB
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc---------cCCCc
Confidence            2223467999999999999988877   479999999999987532111111111111110   11         12356


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .++|+|++++.++....    +..+++.+|.
T Consensus       214 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          214 QPEHIADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            78999999999987543    4567777653

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.85  E-value=1.5e-20  Score=163.35  Aligned_cols=218  Identities=15%  Similarity=0.035  Sum_probs=150.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CC---CeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HP---RFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~---~~~~~~~d~~~~~~~----------   96 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+....... ..   ++.++.+|+++.+..          
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEG-ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999 9999999864222211111111 11   688899999987432          


Q ss_pred             --CCCEEEEcccCCCccc--------cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                        ++|+|||+||......        ..+++...+++|+.++.++++++..    .+.++|++||...+...        
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  155 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--------  155 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC--------
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC--------
Confidence              5999999999754322        2245677889999999999887754    23599999998876321        


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-ccH----HHHHHHHHHcCCCeEE
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRV----VSNFIAQAIRGEPLTV  234 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~~~----~~~~~~~~~~~~~~~~  234 (346)
                             ..+...|+.+|...+.+.+.++.+   .++++++++||.++++...... ...    ...........  .  
T Consensus       156 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  224 (280)
T 1xkq_A          156 -------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC--I--  224 (280)
T ss_dssp             -------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--C--
T ss_pred             -------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--C--
Confidence                   023357999999999999988765   4799999999999987421100 000    01111111111  1  


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPGE  273 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~~  273 (346)
                           ....+.+++|+|++++.++..+    . +..+++.+|..
T Consensus       225 -----p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          225 -----PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             -----TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             -----CCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence                 1125789999999999988654    2 45677777654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.85  E-value=7.5e-20  Score=158.91  Aligned_cols=213  Identities=11%  Similarity=0.017  Sum_probs=153.6

Q ss_pred             CCCEEEEEcCchh--HHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++||||||+|+  ||++++++|+++| +.|++++|+.  ..+...+.. ....+.++.+|+++.+..           
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G-~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREG-AELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTT-CEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcC-CEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            3589999999977  9999999999999 9999999865  222332221 123588999999997432           


Q ss_pred             -CCCEEEEcccCCCcc---------ccccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPI---------FYKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                       ++|+|||+||.....         ...++....+++|+.++..+++++...    +.++|++||...+.          
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------  171 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK----------  171 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS----------
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc----------
Confidence             589999999976531         233456778899999999999887543    34899999988753          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|.+.+.+.+.++.+   .++++.+++||.+..+......  .............+.       
T Consensus       172 ------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-------  236 (280)
T 3nrc_A          172 ------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS--NFKKMLDYNAMVSPL-------  236 (280)
T ss_dssp             ------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT--THHHHHHHHHHHSTT-------
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc--chHHHHHHHHhcCCC-------
Confidence                  2233467999999999999988776   4799999999999987533211  112233222222211       


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                        ..+..++|+|++++.++....    +..+++.+|..
T Consensus       237 --~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          237 --KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             --CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence              236788999999999887532    55788877654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.85  E-value=2.4e-20  Score=162.94  Aligned_cols=215  Identities=13%  Similarity=0.006  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCchh--HHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGF--IGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~--iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+  ||++++++|+++| +.|++++|+.. ..+...+.. ...++.++.+|+++.+..           
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G-~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAG-AELAFTYQGDA-LKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTT-CEEEEEECSHH-HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCC-CEEEEEcCCHH-HHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            4689999999988  9999999999999 99999988631 111121111 113578899999997432           


Q ss_pred             -CCCEEEEcccCCCc--------cccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASP--------IFYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|++||+||....        ....+++...+++|+.++..+++++...   +.++|++||...+.            
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------------  175 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK------------  175 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc------------
Confidence             69999999997642        1233456788999999999999988653   23899999988753            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.......  ............++         
T Consensus       176 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~---------  240 (293)
T 3grk_A          176 ----VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGD--FRYILKWNEYNAPL---------  240 (293)
T ss_dssp             ----BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CC--HHHHHHHHHHHSTT---------
T ss_pred             ----CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccc--hHHHHHHHHhcCCC---------
Confidence                22234679999999999999888764   7899999999999875321111  12222222222111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ..+..++|+|++++.++....    +..+++.+|..+
T Consensus       241 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHHcCccccCCcceEEEECCCccc
Confidence            246688999999999987532    456788776543

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.85  E-value=3.1e-20  Score=159.81  Aligned_cols=194  Identities=15%  Similarity=0.056  Sum_probs=137.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+............ ....+.++.+|+++.+..            +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999 999999986432222111111 124688899999987542            5


Q ss_pred             CCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||.....     ...++....+++|+.++..+++++..    .+ .+||++||...+.               
T Consensus       107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---------------  171 (262)
T 3rkr_A          107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN---------------  171 (262)
T ss_dssp             CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC---------------
T ss_pred             CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC---------------
Confidence            99999999973211     12345677889999999999887643    34 3899999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                       +..+...|+.+|...+.+.+.++.+   .++++++++||.+..+...        .+.    .         ......+
T Consensus       172 -~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~~~----~---------~~~~~~~  229 (262)
T 3rkr_A          172 -PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV--------GLS----A---------KKSALGA  229 (262)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------C
T ss_pred             -CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc--------ccc----c---------ccccccC
Confidence             2334467999999999999988776   4799999999988765311        000    0         0112346


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~  262 (346)
                      +.++|+|++++.++....
T Consensus       230 ~~p~dvA~~v~~l~s~~~  247 (262)
T 3rkr_A          230 IEPDDIADVVALLATQAD  247 (262)
T ss_dssp             CCHHHHHHHHHHHHTCCT
T ss_pred             CCHHHHHHHHHHHhcCcc
Confidence            789999999999998654

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.85  E-value=5e-20  Score=155.93  Aligned_cols=193  Identities=12%  Similarity=0.044  Sum_probs=140.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccC------------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++++|||||+|+||++++++|+++| +.|++++|+.........+.  ....++.++.+|+++.+..            +
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDG-YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999 99999998643222211111  1134788999999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++||+||......    ..+++...+++|+.++.++++++..    .+.++|++||...+.                +
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~----------------~  144 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSAR----------------L  144 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS----------------C
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcc----------------c
Confidence            999999999765433    3456678899999999999888753    345778887766542                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH-hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ......|+.+|.+.+.+.+.+... .++++++++||.+..+......                     .......++.++
T Consensus       145 ~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~---------------------~~~~~~~~~~p~  203 (235)
T 3l77_A          145 IPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP---------------------GKPKEKGYLKPD  203 (235)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS---------------------CCCGGGTCBCHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC---------------------CcccccCCCCHH
Confidence            122356999999999999987444 3799999999998776421100                     001112578899


Q ss_pred             HHHHHHHHHHhCCC
Q 019060          249 DMVDGLIRLMEGEN  262 (346)
Q Consensus       249 Dva~~i~~~~~~~~  262 (346)
                      |+|++++.++..+.
T Consensus       204 dva~~v~~l~~~~~  217 (235)
T 3l77_A          204 EIAEAVRCLLKLPK  217 (235)
T ss_dssp             HHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999998765

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.85  E-value=1.4e-20  Score=161.89  Aligned_cols=211  Identities=18%  Similarity=0.152  Sum_probs=151.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||+|+||++++++|+++| ++|++++|+.....+ ..+.+. .++.++.+|+++.+..            ++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAE-AVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999 999999985422111 111111 4688899999987532            58


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++||+||......    ..++....+++|+.++.++++++...   +.++|++||...++.                 .
T Consensus        82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------------~  144 (263)
T 2a4k_A           82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-----------------F  144 (263)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-----------------H
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-----------------C
Confidence            99999999754322    22345678899999999999988654   349999999877621                 1


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+.   ++++++++||.+.++..... .   ...........++         ..+.+++
T Consensus       145 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~~p~---------~~~~~p~  211 (263)
T 2a4k_A          145 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P---PWAWEQEVGASPL---------GRAGRPE  211 (263)
T ss_dssp             HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C---HHHHHHHHHTSTT---------CSCBCHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C---HHHHHHHHhcCCC---------CCCcCHH
Confidence            12569999999999998887664   79999999999998753211 1   1222222222111         2477899


Q ss_pred             HHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          249 DMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       249 Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      |+|++++.++..+.    +..+++.++..+
T Consensus       212 dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  241 (263)
T 2a4k_A          212 EVAQAALFLLSEESAYITGQALYVDGGRSI  241 (263)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHhCccccCCcCCEEEECCCccc
Confidence            99999999987542    446777776554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.84  E-value=4.4e-20  Score=158.47  Aligned_cols=218  Identities=13%  Similarity=0.017  Sum_probs=147.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-hcC-CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-WIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|+++.+........... +.. ..++.++.+|+++.+..            
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEG-ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 9999885543222222211 111 24688899999997532            


Q ss_pred             CCCEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||.... ..    ..+++...+++|+.++..+++++...-   .++|++||...+..               
T Consensus        86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------  150 (259)
T 3edm_A           86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG---------------  150 (259)
T ss_dssp             SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC---------------
T ss_pred             CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC---------------
Confidence            59999999986522 11    223457789999999999999987652   38999999887611               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      +......|+.+|...+.+.+.++.+.+  +++..++||.+..+......   .+......         ........+.+
T Consensus       151 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~---~~~~~~~~---------~~~~p~~r~~~  218 (259)
T 3edm_A          151 GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT---KPEVRERV---------AGATSLKREGS  218 (259)
T ss_dssp             CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------------CCBC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc---ChHHHHHH---------HhcCCCCCCcC
Confidence            122335799999999999999887754  88999999999876422100   01111111         11112235778


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCCCCH
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGEFTM  276 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~  276 (346)
                      ++|+|++++.++....    +..+++.++...+.
T Consensus       219 pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~  252 (259)
T 3edm_A          219 SEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE  252 (259)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence            9999999999987543    55788877665443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=9.8e-21  Score=163.82  Aligned_cols=195  Identities=13%  Similarity=0.045  Sum_probs=142.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+++||||||+|+||++++++|+++| ++|++++|+.........+... ..++.++.+|+.+.+..            +
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            46899999999999999999999999 9999999854222111111111 24688999999986432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..++....+++|+.++.++++++    ++.+. +||++||...+..               
T Consensus       109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  173 (272)
T 1yb1_A          109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS---------------  173 (272)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC---------------
T ss_pred             CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC---------------
Confidence            999999999764322    23455678899999988777665    34454 8999999887631               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh------CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH------GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       ..+...|+.+|.+.|.+++.++.+.      +++++++|||.+.++...   ...                    ....
T Consensus       174 -~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~---~~~--------------------~~~~  229 (272)
T 1yb1_A          174 -VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK---NPS--------------------TSLG  229 (272)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---CTH--------------------HHHC
T ss_pred             -CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc---ccc--------------------cccc
Confidence             1223569999999999999887764      789999999999887521   000                    0113


Q ss_pred             ecccHHHHHHHHHHHHhCCCCCc
Q 019060          243 SFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      .+++++|+|++++.++..+...+
T Consensus       230 ~~~~~~dva~~i~~~~~~~~~~~  252 (272)
T 1yb1_A          230 PTLEPEEVVNRLMHGILTEQKMI  252 (272)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHHHHHHHHHcCCCEE
Confidence            57899999999999998765433

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.5e-20  Score=160.98  Aligned_cols=221  Identities=16%  Similarity=0.128  Sum_probs=150.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+..... .+...+  .++.++.+|+++.+..            ++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSG-ARVVICDKDESGGR-ALEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHh--cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999998532211 111111  3478899999987532            69


Q ss_pred             CEEEEcccCCCcc-c----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||..... .    ..+++...+++|+.++.++++++..    .+.++|++||...+..                
T Consensus        84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------------  147 (270)
T 1yde_A           84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------------  147 (270)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------------
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCC----------------
Confidence            9999999975421 1    2234678889999999999888753    3459999999865321                


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCC---CCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNI---DDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      ......|+.+|...+.+.+.++.+   .++++++++||.++++....   ...... ..+.......+         ...
T Consensus       148 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~p---------~~r  217 (270)
T 1yde_A          148 QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR-ASIREGMLAQP---------LGR  217 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH-HHHHHHHHTST---------TSS
T ss_pred             CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH-HHHHHHhhcCC---------CCC
Confidence            112356999999999999988765   47999999999999873110   000000 00111111111         123


Q ss_pred             cccHHHHHHHHHHHHhCCC---CCcEEecCCCCCCHHHHHH
Q 019060          244 FCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFTMLELAE  281 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~s~~ei~~  281 (346)
                      +...+|+|++++.++....   +..+.+.+|..+.+.....
T Consensus       218 ~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~~  258 (270)
T 1yde_A          218 MGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKAS  258 (270)
T ss_dssp             CBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-----
T ss_pred             CcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCcc
Confidence            6789999999998886532   4578888887766544443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.84  E-value=7.9e-20  Score=159.31  Aligned_cols=217  Identities=17%  Similarity=0.118  Sum_probs=152.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------------Ccchhhhh---c--CCCCeeEEecccCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------SKDNLRKW---I--GHPRFELIRHDVTEP   93 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------------~~~~~~~~---~--~~~~~~~~~~d~~~~   93 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.+.            ..+.+.+.   +  ...++.++.+|+++.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEG-ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            46899999999999999999999999 999999986321            11222111   1  124688899999997


Q ss_pred             ccC------------CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccc
Q 019060           94 LLI------------EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEV  150 (346)
Q Consensus        94 ~~~------------~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v  150 (346)
                      +..            ++|++||+||......     ..+++...+++|+.++..+++++..    .+  .++|++||...
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~  168 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG  168 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence            533            6999999999755332     3355678899999999999887643    23  38999999887


Q ss_pred             cCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHH-----
Q 019060          151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNF-----  222 (346)
Q Consensus       151 ~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~-----  222 (346)
                      +.                +......|+.+|...+.+.+.++.+   .++++.+++||.+..+.....  .....+     
T Consensus       169 ~~----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~  230 (286)
T 3uve_A          169 LK----------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE--GTFKMFRPDLE  230 (286)
T ss_dssp             TS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH--HHHHHHCTTSS
T ss_pred             cc----------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc--chhhhcccccc
Confidence            63                2233457999999999999988877   479999999999998753210  000000     


Q ss_pred             ------HHHH-HcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          223 ------IAQA-IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       223 ------~~~~-~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                            .... .....        ....+.+++|+|++++.++....    +..+++.+|..+
T Consensus       231 ~~~~~~~~~~~~~~~~--------~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          231 NPGPDDMAPICQMFHT--------LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             SCCHHHHHHHHHTTCS--------SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ccchhhHHHHHHhhhc--------cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence                  0000 00111        11357899999999999986542    557888877543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.84  E-value=3.1e-20  Score=160.45  Aligned_cols=199  Identities=17%  Similarity=0.155  Sum_probs=136.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+...+ +. .++.++.+|+++.+..            ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAG-YGVALAGRRLDALQETAAE-IG-DDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-HT-SCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-hC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999 9999999854322222222 22 4688999999997432            69


Q ss_pred             CEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           99 DQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG---ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        99 d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      |++||+||...+.     ...+++...+++|+.++..+++++.    +.+   .++|++||...+.              
T Consensus       104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~--------------  169 (272)
T 4dyv_A          104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS--------------  169 (272)
T ss_dssp             CEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS--------------
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC--------------
Confidence            9999999975431     1234567889999999888877653    333   3899999987652              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +..+...|+.+|...+.+.+.++.+   .++++.+++||.+..+....    +.... ....         .......
T Consensus       170 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~-~~~~---------~~~~~~~  233 (272)
T 4dyv_A          170 --PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK----MKAGV-PQAD---------LSIKVEP  233 (272)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------------
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh----hcccc-hhhh---------hcccccC
Confidence              2233467999999999999988876   47899999999998764211    10000 0000         0011234


Q ss_pred             cccHHHHHHHHHHHHhCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~  262 (346)
                      +..++|+|++++.++..+.
T Consensus       234 ~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          234 VMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             --CHHHHHHHHHHHHHSCT
T ss_pred             CCCHHHHHHHHHHHhCCCC
Confidence            7899999999999998765

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.84  E-value=2.7e-20  Score=160.83  Aligned_cols=217  Identities=17%  Similarity=0.094  Sum_probs=151.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|+++++......+.....+  ...++.++.+|+++.+..            
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLG-AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999988774322222222211  124688999999997543            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      ++|++||+||......    ..+++...+++|+.++..+++++...   +.++|++||.....               .+
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~~  160 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---------------FS  160 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---------------CC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---------------CC
Confidence            6999999999765433    33566788999999999999988664   33899999976321               12


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCC-------C-ccHHHHHHHHHHcCCCeEEecCC
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNID-------D-GRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                      ..+...|+.+|...+.+.+.++.+   .++++..++||.+..+.....       . ...............+       
T Consensus       161 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------  233 (270)
T 3is3_A          161 VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP-------  233 (270)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST-------
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC-------
Confidence            233467999999999999998877   479999999999988742100       0 0001111111111111       


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                        ...+.+++|+|++++.++....    +..+++.+|.
T Consensus       234 --~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          234 --LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             --TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             --CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence              1246689999999999986542    4467777653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.84  E-value=3.7e-20  Score=159.11  Aligned_cols=201  Identities=13%  Similarity=0.066  Sum_probs=138.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      +++++|||||+|+||++++++|++.| +.|++++|+..........+.. ...+.++.+|+++.+..            +
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAG-AKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 9999999864322221111111 24678899999997532            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++..+.+++.    +.+. ++|++||...+.                
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~----------------  145 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALS----------------  145 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcc----------------
Confidence            999999999765332    234567788999999998877663    3444 899999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh-CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      +......|+.+|...+.+.+.++.+. ++++.+++||.+..+....        +..    ........  .....++..
T Consensus       146 ~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~--------~~~----~~~~~~~~--~~~~~~~~p  211 (264)
T 3tfo_A          146 VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT--------ITH----EETMAAMD--TYRAIALQP  211 (264)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------------CCCH
T ss_pred             cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc--------ccc----hhHHHHHH--hhhccCCCH
Confidence            22233579999999999999988775 7889999999988764211        000    00000000  011125789


Q ss_pred             HHHHHHHHHHHhCCC
Q 019060          248 SDMVDGLIRLMEGEN  262 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~  262 (346)
                      +|+|++++.++..+.
T Consensus       212 edvA~~v~~l~s~~~  226 (264)
T 3tfo_A          212 ADIARAVRQVIEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhcCCc
Confidence            999999999998776

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.84  E-value=1.9e-20  Score=165.58  Aligned_cols=211  Identities=15%  Similarity=0.072  Sum_probs=137.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++||||||+|+||++++++|+++| +.|++++|+..........+.   ....+.++.+|+++.+..           
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G-~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQG-CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            35799999999999999999999999 999999996432222211111   112688999999997432           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc-----------CCeEEEEecccccCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-----------GARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~r~i~~SS~~v~~~~~~~~~~  160 (346)
                       ++|+|||+||......    ..++....+++|+.++.++++++...           +.++|++||...+..       
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~-------  158 (319)
T 3ioy_A           86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA-------  158 (319)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC-------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC-------
Confidence             5899999999754322    23456778999999999988876432           337999999887632       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHc---CCCeEE
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR---GEPLTV  234 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~---~~~~~~  234 (346)
                               ......|+.+|.+.+.+.+.++.+   .++++++++||.|.++......  .....+.....   ...+..
T Consensus       159 ---------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~~~  227 (319)
T 3ioy_A          159 ---------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD--IRPDALKGEVKPVDKTAVER  227 (319)
T ss_dssp             ---------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------
T ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccc--cCchhhcccccchhHHHHHH
Confidence                     222357999999888777766554   3799999999999887532110  01111110000   000110


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      .  .......++++|+|+.++.+++++.
T Consensus       228 ~--~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          228 L--AGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             ---CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             H--HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence            0  0111123799999999999998754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.84  E-value=2.7e-20  Score=157.46  Aligned_cols=190  Identities=13%  Similarity=0.063  Sum_probs=138.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      ++++|||||+|+||++++++|+++| +.|++++|+.....+ ....+. .++.++.+|+++.+..            ++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERG-HQVSMMGRRYQRLQQ-QELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            5789999999999999999999999 999999996432222 222222 2588999999987532            589


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      ++||+||......    ..+++...+++|+.++..+++++..    .+.++|++||...+.                +..
T Consensus        80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~  143 (235)
T 3l6e_A           80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV----------------GKA  143 (235)
T ss_dssp             EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS----------------SCS
T ss_pred             EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC----------------CCC
Confidence            9999999754322    3356678899999999988887743    233899999987653                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+.   ++++.+++||.+..+....        ...       .       ....++.++
T Consensus       144 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--------~~~-------~-------~~~~~~~pe  201 (235)
T 3l6e_A          144 NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN--------TDH-------V-------DPSGFMTPE  201 (235)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------------CBCHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhc--------cCC-------C-------CCcCCCCHH
Confidence            33579999999999999988764   6899999999997764210        000       0       011578999


Q ss_pred             HHHHHHHHHHhCCC
Q 019060          249 DMVDGLIRLMEGEN  262 (346)
Q Consensus       249 Dva~~i~~~~~~~~  262 (346)
                      |+|++++.++..+.
T Consensus       202 dvA~~v~~l~~~~~  215 (235)
T 3l6e_A          202 DAAAYMLDALEARS  215 (235)
T ss_dssp             HHHHHHHHHTCCCS
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999998655

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.4e-20  Score=162.00  Aligned_cols=204  Identities=15%  Similarity=0.057  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+++||||||+|+||++++++|++.| ++|++++|+............   ....+.++.+|+.+.+..           
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 999999985422111111111   113578899999987542           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHH----HHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIG----TLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~----~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       ++|+|||+||......    ...++...+++|+.+    +..++..+++.+   .++|++||...+..           
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~-----------  178 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV-----------  178 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc-----------
Confidence             6999999999654322    234567788999999    666777777766   48999999987632           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                         .+..+...|+.+|...+.+.+.++.+     .++++++++||.+.++......... .......            .
T Consensus       179 ---~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~------------~  242 (279)
T 1xg5_A          179 ---LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-PEKAAAT------------Y  242 (279)
T ss_dssp             ---CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-HHHHHHH------------H
T ss_pred             ---CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccC-hhHHhhh------------c
Confidence               12233457999999999998887665     3689999999999876310000000 0000000            0


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      ....+++++|+|++++.++..+.
T Consensus       243 ~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          243 EQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             C---CBCHHHHHHHHHHHHHSCT
T ss_pred             ccccCCCHHHHHHHHHHHhcCCc
Confidence            11247899999999999998654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.84  E-value=4.3e-20  Score=157.22  Aligned_cols=203  Identities=17%  Similarity=0.122  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHh-cCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC----------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI----------EVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~----------~~d   99 (346)
                      .+|++|||||+|+||++++++|++ .| +.|++++|.....         ...+.++.+|+++.+..          ++|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g-~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id   72 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKN-HTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFD   72 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTT-EEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCC-cEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCC
Confidence            357899999999999999999999 67 8999988854311         13568899999986432          689


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      ++||+||......    ..+++...+++|+.++..+++++...-   .++|++||...+.                +...
T Consensus        73 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~  136 (244)
T 4e4y_A           73 GIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI----------------AKPN  136 (244)
T ss_dssp             EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC----------------CCTT
T ss_pred             EEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc----------------CCCC
Confidence            9999999764322    234567789999999999999887642   3799999988763                2233


Q ss_pred             CCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHH-----------HHHHHHcCCCeEEecCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSN-----------FIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  238 (346)
                      ...|+.+|...+.+.+.++.+   .++++.+++||.+.++..    ......           ........         
T Consensus       137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~---------  203 (244)
T 4e4y_A          137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLY----RNLIQKYANNVGISFDEAQKQEEKE---------  203 (244)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHH----HHHHHHHHHHHTCCHHHHHHHHHTT---------
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhh----HHHHHhhhhhcCCCHHHHHHHHhhc---------
Confidence            457999999999999988874   479999999999987631    111111           11111111         


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .....+.+++|+|++++.++....    ++.+++.+|.
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            112357889999999999997543    4567777764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.84  E-value=8.6e-20  Score=157.24  Aligned_cols=219  Identities=12%  Similarity=0.021  Sum_probs=150.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+..........+   ....++.++.+|+++.+..           
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAG-AAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999 99999998643222222221   1223588999999997532           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++||+||......    ..+++...+++|+.++..+++++..    .+. ++|++||...+.              
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------  151 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ--------------  151 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTS--------------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCC--------------
Confidence             6999999999764322    2345678899999999999988743    333 899999987652              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc------cHHHHHHHHHHcCCCeEEecC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG------RVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  237 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.......      .....+.........+     
T Consensus       152 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  224 (265)
T 3lf2_A          152 --PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQI-----  224 (265)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTC-----
T ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCC-----
Confidence              22334679999999999999888774   7899999999998753100000      0001111111111101     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                        ....+..++|+|++++.++....    +..+++.+|..
T Consensus       225 --p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          225 --PLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             --TTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             --CcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence              11247789999999999987532    44677777643

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.84  E-value=1.6e-19  Score=153.82  Aligned_cols=203  Identities=12%  Similarity=0.054  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      ++|++|||||+|+||++++++|+++| +.|++++|+.........++. ...++.++.+|+++.+..            +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEG-AAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999 999999985422111111111 123688899999987432            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++||+||......    ..++....+++|+.++.++++++..    .+.++|++||...+.                +
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~  148 (247)
T 2jah_A           85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV----------------N  148 (247)
T ss_dssp             CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTC----------------C
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcC----------------C
Confidence            999999999754322    2245667889999999999887643    235899999987653                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+   .++++++++||.+..+.................    +        .++.++.
T Consensus       149 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~----~--------~~~~~~~  216 (247)
T 2jah_A          149 VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQR----I--------SQIRKLQ  216 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHH----T--------TTSCCBC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhc----c--------cccCCCC
Confidence            223357999999999999888765   379999999999988742211111111111110    0        1112578


Q ss_pred             HHHHHHHHHHHHhCCC
Q 019060          247 VSDMVDGLIRLMEGEN  262 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~  262 (346)
                      .+|+|++++.++..+.
T Consensus       217 pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          217 AQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.84  E-value=1.1e-19  Score=158.45  Aligned_cols=210  Identities=19%  Similarity=0.139  Sum_probs=147.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCC----cccC-------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTE----PLLI-------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~----~~~~-------   96 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++|+.....+.....+   ...++.++.+|+++    .+..       
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTG-YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            46899999999999999999999999 999999986411111111111   12468899999999    4321       


Q ss_pred             -----CCCEEEEcccCCCccc--------------cccChHHHHHHHHHHHHHHHHHHHHc----C------C-eEEEEe
Q 019060           97 -----EVDQIYHLACPASPIF--------------YKYNPVKTIKTNVIGTLNMLGLAKRV----G------A-RILLTS  146 (346)
Q Consensus        97 -----~~d~vi~~a~~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~-r~i~~S  146 (346)
                           ++|+|||+||......              ...+....+++|+.++..+++++...    +      . ++|++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence                 6999999999754321              22345678899999999988877432    2      3 899999


Q ss_pred             cccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHH
Q 019060          147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFI  223 (346)
Q Consensus       147 S~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~  223 (346)
                      |...+.                +..+...|+.+|...+.+.+.++.+.   ++++++++||.++++. ..  .   ....
T Consensus       181 S~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~--~---~~~~  238 (288)
T 2x9g_A          181 DAMVDQ----------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AM--G---EEEK  238 (288)
T ss_dssp             CTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TS--C---HHHH
T ss_pred             cccccC----------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-cc--C---hHHH
Confidence            987653                22334579999999999999887764   7999999999999886 21  1   1122


Q ss_pred             HHHHcCCCeEEecCCcceeec-ccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          224 AQAIRGEPLTVQAPGTQTRSF-CYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~-v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .......++         ..+ ..++|+|++++.++....    +..+++.+|.
T Consensus       239 ~~~~~~~p~---------~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          239 DKWRRKVPL---------GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HHHHHTCTT---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhhCCC---------CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            222222111         124 688999999999987532    4456666654

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.83  E-value=1.8e-19  Score=159.79  Aligned_cols=212  Identities=12%  Similarity=0.026  Sum_probs=149.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe-CCCCCCcchhhhhc--CCCCeeEEecccCCcc-------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWI--GHPRFELIRHDVTEPL-------------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~-------------   94 (346)
                      .++++|||||+|+||++++++|+++| +.|++++ |+..........+.  ...++.++.+|+.+.+             
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G-~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            35799999999999999999999999 9999998 75322111111111  1246889999999877             


Q ss_pred             ----cC------------CCCEEEEcccCCCcccc------------------ccChHHHHHHHHHHHHHHHHHHH----
Q 019060           95 ----LI------------EVDQIYHLACPASPIFY------------------KYNPVKTIKTNVIGTLNMLGLAK----  136 (346)
Q Consensus        95 ----~~------------~~d~vi~~a~~~~~~~~------------------~~~~~~~~~~n~~~~~~l~~~~~----  136 (346)
                          ..            ++|+|||+||.......                  .++....+++|+.++..+++++.    
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                32            59999999997543221                  33456778999999999888765    


Q ss_pred             HcC------C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccc
Q 019060          137 RVG------A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNT  206 (346)
Q Consensus       137 ~~~------~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i  206 (346)
                      +.+      . +||++||...+.                +..+...|+.+|...+.+.+.++.+.   ++++++++||.+
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v  267 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  267 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hcCCcCCCCCcEEEEECchhhcc----------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence            333      3 899999987653                22234579999999999999888764   799999999999


Q ss_pred             cCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+. ..     ++..........++.        ..+..++|+|++++.++....    +..+++.+|..
T Consensus       268 ~T~~-~~-----~~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          268 VLVD-DM-----PPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             SCCC-CS-----CHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCc-cc-----cHHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            9876 21     122233322221110        036689999999999986432    44677777643

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.83  E-value=1.2e-20  Score=161.86  Aligned_cols=214  Identities=12%  Similarity=0.029  Sum_probs=135.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc---------CCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL---------IEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------~~~d~vi~  103 (346)
                      |+||||||+|+||++++++|+++| ++|++++|+......           . +.+|+.+.+.         .++|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAG-HQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence            589999999999999999999999 999999986532211           1 4567666422         35799999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCC------------
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGN------------  166 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~------------  166 (346)
                      +||....   ....+..+++|+.++.++++++.    +.+ .++|++||...+..+...+..+.....            
T Consensus        69 ~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (257)
T 1fjh_A           69 CAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEH  145 (257)
T ss_dssp             CCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred             CCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhc
Confidence            9986541   23478899999999999988875    334 499999999887321111110000000            


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      ..+..+...|+.+|.+.|.+.+.++.+   .++++++++||.+.++.....   ............  +     ......
T Consensus       146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~--~-----~~~~~~  215 (257)
T 1fjh_A          146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG---LQDPRYGESIAK--F-----VPPMGR  215 (257)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--------------------------C-----CCSTTS
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh---ccchhHHHHHHh--c-----ccccCC
Confidence            011123467999999999999887765   479999999999988752210   000000010000  0     001124


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++++|+|++++.++..+.    +..+++.++.
T Consensus       216 ~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            7899999999999987642    3456676654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.83  E-value=5.3e-20  Score=159.26  Aligned_cols=215  Identities=15%  Similarity=0.049  Sum_probs=150.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------~   97 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+.........+.. ...++.++.+|+.+....           +
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAG-AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            456899999999999999999999999 999999997644433332222 134688999999987532           6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++..+++++    ++.+. ++|++||...+.                
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~----------------  173 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR----------------  173 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC----------------
Confidence            999999999754332    23456778899999999998876    33444 999999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCC-CeEEecCCcceeec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGE-PLTVQAPGTQTRSF  244 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  244 (346)
                      +..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+..... ....+.......... ++         ..+
T Consensus       174 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~p~---------~r~  243 (275)
T 4imr_A          174 PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADR-RAQDPEGWDEYVRTLNWM---------GRA  243 (275)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHH-HHHCHHHHHHHHHHHSTT---------CSC
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccc-cccChHHHHHHHhhcCcc---------CCC
Confidence            22333569999999999999888775   78999999999987531000 000011111111110 11         235


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..++|+|++++.++....    +..+++.+|
T Consensus       244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          244 GRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            678999999999987543    446777664

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.83  E-value=2.7e-20  Score=157.68  Aligned_cols=194  Identities=16%  Similarity=0.157  Sum_probs=141.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------------IE   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------------~~   97 (346)
                      +|++|||||+|+||++++++|+++| ++|++++|+.....         ....++.+|+++.+.              .+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNG-YTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999999999999999999999 99999999653321         135677899987632              36


Q ss_pred             CCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|+|||+||......     ..+++...+++|+.++..+++++...   +.++|++||...+.                +
T Consensus        73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------------~  136 (236)
T 1ooe_A           73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------P  136 (236)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------C
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc----------------C
Confidence            999999999654222     23456788899999999999988753   23899999988763                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ..+...|+.+|...+.+.+.++.+.     ++++++++||.+.++.            ........         ....+
T Consensus       137 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~------------~~~~~~~~---------~~~~~  195 (236)
T 1ooe_A          137 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM------------NRKWMPNA---------DHSSW  195 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH------------HHHHSTTC---------CGGGC
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc------------hhhcCCCc---------ccccc
Confidence            2334679999999999999988764     3899999999988752            11111111         11246


Q ss_pred             ccHHHHHHHHHHHHhCCC-----CCcEEecCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN-----TGPINIGNPG  272 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~-----~~~~~~~~~~  272 (346)
                      ++.+|+|++++.++..+.     +..+.+.++.
T Consensus       196 ~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          196 TPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             BCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             CCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            788999999997663221     4456665543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.83  E-value=1.1e-19  Score=160.42  Aligned_cols=220  Identities=13%  Similarity=0.112  Sum_probs=150.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--------Ccchhhhh---c--CCCCeeEEecccCCcccC-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDNLRKW---I--GHPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~~~~~~~---~--~~~~~~~~~~d~~~~~~~-   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+...        ..+.+.+.   .  ...++.++.+|+++.+.. 
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G-~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDG-ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35799999999999999999999999 999999875321        11121111   1  124688899999997532 


Q ss_pred             -----------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEecccccCCCC
Q 019060           97 -----------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG--ARILLTSTSEVYGDPL  155 (346)
Q Consensus        97 -----------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~r~i~~SS~~v~~~~~  155 (346)
                                 ++|++||+||......    ..+++...+++|+.++..+++++..    .+  .++|++||...+.   
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~---  200 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR---  200 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS---
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC---
Confidence                       6999999999765432    3345677889999999998887632    33  3899999988753   


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC--C
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG--E  230 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~--~  230 (346)
                                   +......|+.+|...+.+.+.++.+.   ++++.+++||.++++....      ..........  .
T Consensus       201 -------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~~~~~~~~~~~~~  261 (317)
T 3oec_A          201 -------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN------EKLLKMFLPHLEN  261 (317)
T ss_dssp             -------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHC------HHHHHHHCTTCSS
T ss_pred             -------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccc------hhhhhhhhhhccc
Confidence                         22234679999999999999988774   7999999999998863110      0001110000  0


Q ss_pred             Ce-----EEe-cCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          231 PL-----TVQ-APGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       231 ~~-----~~~-~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..     ... ........+++++|+|++++.++....    +..+++.+|..
T Consensus       262 ~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          262 PTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             CCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            00     000 000111468899999999999886542    55788887654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.83  E-value=2.2e-20  Score=159.75  Aligned_cols=209  Identities=15%  Similarity=0.057  Sum_probs=145.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEeccc--CCccc-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDV--TEPLL-----------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~--~~~~~-----------   95 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+.....+....+.  ....+.++.+|+  .+.+.           
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYG-ATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999 999999986432221111111  123678899999  65432           


Q ss_pred             -CCCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           96 -IEVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       .++|++||+||.....     ...+++...+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------  157 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQ------------  157 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTS------------
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhcc------------
Confidence             2699999999974321     123445778999999999999887    44443 899999987652            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                          +......|+.+|...+.+.+.++.+..  +++..+.||.+..+.            ........         ...
T Consensus       158 ----~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~------------~~~~~~~~---------~~~  212 (252)
T 3f1l_A          158 ----GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM------------RASAFPTE---------DPQ  212 (252)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH------------HHHHCTTC---------CGG
T ss_pred             ----CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch------------hhhhCCcc---------chh
Confidence                223345799999999999999988764  788889998876531            11111111         112


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHH
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTML  277 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~  277 (346)
                      .+..++|+|++++.++....    +..+++.+|...++.
T Consensus       213 ~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~~  251 (252)
T 3f1l_A          213 KLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGIS  251 (252)
T ss_dssp             GSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC------
T ss_pred             ccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence            46788999999999987543    557888888776654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.83  E-value=8.7e-20  Score=153.90  Aligned_cols=190  Identities=12%  Similarity=0.052  Sum_probs=135.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC---------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI---------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~---------~~d~vi~  103 (346)
                      |+||||||+|+||++++++|+++| +.|++++|+...... ....+ ..++.++.+|+.+.+..         ..|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEG-KATYLTGRSESKLST-VTNCL-SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCHHHHHH-HHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHH-HHHHH-hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            579999999999999999999999 999999985422221 11112 24688899999987433         2599999


Q ss_pred             cccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          104 LACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       104 ~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      +||......    ..++....+++|+.++..+++++...    +.++|++||...+.                +..+...
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~----------------~~~~~~~  142 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ----------------PKAQEST  142 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS----------------CCTTCHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC----------------CCCCCch
Confidence            999764332    23456778899999999998877543    33899999988763                2233467


Q ss_pred             hHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      |+.+|...+.+.+.++.+.   ++++..++||.+..+...        ..    .  ...       ....+++++|+|+
T Consensus       143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~--------~~----~--~~~-------~~~~~~~~~dvA~  201 (230)
T 3guy_A          143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWE--------TS----G--KSL-------DTSSFMSAEDAAL  201 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------------CCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHH--------hc----C--CCC-------CcccCCCHHHHHH
Confidence            9999999999999998875   689999999988765311        00    0  001       1235789999999


Q ss_pred             HHHHHHhCCC
Q 019060          253 GLIRLMEGEN  262 (346)
Q Consensus       253 ~i~~~~~~~~  262 (346)
                      +++.++..+.
T Consensus       202 ~i~~l~~~~~  211 (230)
T 3guy_A          202 MIHGALANIG  211 (230)
T ss_dssp             HHHHHCCEET
T ss_pred             HHHHHHhCcC
Confidence            9999987554

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.83  E-value=1.9e-19  Score=153.41  Aligned_cols=206  Identities=15%  Similarity=0.103  Sum_probs=140.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d~  100 (346)
                      |++|||||+|+||++++++|+++| ++|++++|+..... .....+. .++.++.+|+++.+..            ++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQG-HKVIATGRRQERLQ-ELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            589999999999999999999999 99999998542211 1112122 3688899999986422            5999


Q ss_pred             EEEcccCCC-cc----ccccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          101 IYHLACPAS-PI----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       101 vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +||+||... ..    ...+++...+++|+.++..+++++.    +.+ .++|++||...+.                +.
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~----------------~~  141 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW----------------PY  141 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS----------------CC
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhcc----------------CC
Confidence            999999652 11    1234567889999999998888764    344 4999999987653                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccC-CCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYG-PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      .+...|+.+|...+.+.+.++.+.   ++++++++||.+.| +....    .+... ....  ...  .    ....++.
T Consensus       142 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~----~~~~~-~~~~--~~~--~----~~~~~~~  208 (248)
T 3asu_A          142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV----RFKGD-DGKA--EKT--Y----QNTVALT  208 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------------CCBC
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhh----cccCc-hHHH--HHH--H----hccCCCC
Confidence            234579999999999999988764   79999999999994 43110    00000 0000  000  0    0123468


Q ss_pred             HHHHHHHHHHHHhCCC---CCcEEecC
Q 019060          247 VSDMVDGLIRLMEGEN---TGPINIGN  270 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~~~~~~~  270 (346)
                      ++|+|++++.++..+.   ...+.+..
T Consensus       209 p~dvA~~v~~l~s~~~~~~g~~i~v~~  235 (248)
T 3asu_A          209 PEDVSEAVWWVSTLPAHVNINTLEMMP  235 (248)
T ss_dssp             HHHHHHHHHHHHHSCTTCCCCEEEECC
T ss_pred             HHHHHHHHHHHhcCCccceeeEEEEcc
Confidence            9999999999998654   33445443

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.83  E-value=3e-20  Score=158.60  Aligned_cols=195  Identities=15%  Similarity=0.091  Sum_probs=139.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccC---------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~---------   96 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+............    ...++.++.+|+++.+..         
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDG-YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHT-CEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999 999999986432222111111    115688999999996432         


Q ss_pred             ---CCCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 ---EVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                         ++|++||+||......   ..+++...+++|+.++..+++++    ++.+. ++|++||...+.             
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-------------  150 (250)
T 3nyw_A           84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKY-------------  150 (250)
T ss_dssp             HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcC-------------
Confidence               5999999999754322   23456778899999999988877    33444 899999987542             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                         +..+...|+.+|...+.+.+.++.+.   ++++.+++||.+..+.            ....  ....       ...
T Consensus       151 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~------------~~~~--~~~~-------~~~  206 (250)
T 3nyw_A          151 ---GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM------------AKKA--GTPF-------KDE  206 (250)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH------------HHHT--TCCS-------CGG
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch------------hhhc--CCCc-------ccc
Confidence               12224679999999999999888774   7899999999887541            1111  1111       123


Q ss_pred             ecccHHHHHHHHHHHHhCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~  262 (346)
                      .++.++|+|++++.++..+.
T Consensus       207 ~~~~p~dva~~v~~l~s~~~  226 (250)
T 3nyw_A          207 EMIQPDDLLNTIRCLLNLSE  226 (250)
T ss_dssp             GSBCHHHHHHHHHHHHTSCT
T ss_pred             cCCCHHHHHHHHHHHHcCCC
Confidence            57899999999999998664

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.83  E-value=6.1e-20  Score=159.05  Aligned_cols=202  Identities=16%  Similarity=0.021  Sum_probs=143.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHh-cCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+++||||||+|+||++++++|++ .| +.|++++|+..........+.. ..++.++.+|+.+.+..            
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcC-CeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            368999999999999999999999 89 9999999864222221111111 24688999999986432            


Q ss_pred             CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCC-CC----------CCC
Q 019060           97 EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGD-PL----------VHP  158 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~-~~----------~~~  158 (346)
                      ++|+|||+||.......    ..+....+++|+.++.++++++...-   .+||++||...+.. ..          ..+
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  161 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  161 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence            69999999997543222    24567789999999999999997652   38999999876531 00          011


Q ss_pred             CCCCCcC--------------CCCCCCCCCchHHhHHHHHHHHHHHHHH-------hCCceEEEEeccccCCCCCCCCcc
Q 019060          159 QDESYWG--------------NVNPIGVRSCYDEGKRVAETLMFDYHRQ-------HGIEIRIARIFNTYGPRMNIDDGR  217 (346)
Q Consensus       159 ~~e~~~~--------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ivR~~~i~G~~~~~~~~~  217 (346)
                      ++|+.+.              ...+..|...|+.+|.+.|.+++.++.+       .++++++++||.+.++....    
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----  237 (276)
T 1wma_A          162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----  237 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred             cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc----
Confidence            2221100              0011224478999999999999887765       47999999999998764210    


Q ss_pred             HHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          218 VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                                              ..+.+++|+|+.++.++..+
T Consensus       238 ------------------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 ------------------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             ------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             ------------------------cccCChhHhhhhHhhhhcCc
Confidence                                    13679999999999999744

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.83  E-value=1.3e-19  Score=153.86  Aligned_cols=195  Identities=15%  Similarity=0.086  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------------~   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+.....         ....++.+|+++.+.              .
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARN-WWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCC-CEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999 99999999653221         134677899987632              3


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+||......     ..++....+++|+.++..+++++...   +.++|++||...+.                
T Consensus        76 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------  139 (241)
T 1dhr_A           76 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------------  139 (241)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------
T ss_pred             CCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc----------------
Confidence            6999999999754322     23456778899999999999988653   24899999988763                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +..+...|+.+|...+.+.+.++.+.     ++++++++||.+-.+.            ........         ....
T Consensus       140 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~------------~~~~~~~~---------~~~~  198 (241)
T 1dhr_A          140 GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------------NRKSMPEA---------DFSS  198 (241)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------------HHHHSTTS---------CGGG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc------------ccccCcch---------hhcc
Confidence            22234679999999999999887653     5899999999876541            11111111         1124


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +++.+|+|++++.++....    ++.+.+.+++
T Consensus       199 ~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          199 WTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             SEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             CCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence            5678999999999987543    4456665543

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.83  E-value=1.4e-19  Score=157.72  Aligned_cols=199  Identities=12%  Similarity=0.076  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|+||||||+|+||++++++|+++| ++|++++|+...........  ....++.++.+|+++.+..            
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 99999998542211111111  1223678899999986432            


Q ss_pred             CCCEEEEc-ccCCCccc---cccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHL-ACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~-a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|+|||+ ||......   ..++....+++|+.++.++++++..    .+.++|++||...+.                
T Consensus       106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------  169 (286)
T 1xu9_A          106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV----------------  169 (286)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS----------------
T ss_pred             CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccccc----------------
Confidence            69999999 56543221   2234567889999999998887643    345999999987653                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +..+...|+.+|...|.+.+.++.+.     ++++++++||.+..+.        .    .....         +.....
T Consensus       170 ~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~--------~----~~~~~---------~~~~~~  228 (286)
T 1xu9_A          170 AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET--------A----MKAVS---------GIVHMQ  228 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH--------H----HHHSC---------GGGGGG
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChh--------H----HHhcc---------ccccCC
Confidence            22234679999999999998887654     7899999999887542        1    11111         112235


Q ss_pred             cccHHHHHHHHHHHHhCCCCCcEE
Q 019060          244 FCYVSDMVDGLIRLMEGENTGPIN  267 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~~~~~~  267 (346)
                      +++++|+|+.++.++..+..+.|.
T Consensus       229 ~~~~~~vA~~i~~~~~~~~~~~~~  252 (286)
T 1xu9_A          229 AAPKEECALEIIKGGALRQEEVYY  252 (286)
T ss_dssp             CBCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHHHHHHHHHhcCCceEEe
Confidence            789999999999999876655443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.82  E-value=1.9e-19  Score=155.49  Aligned_cols=200  Identities=12%  Similarity=0.039  Sum_probs=135.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d~  100 (346)
                      |++|||||+|+||++++++|+++| ++|++++|+...............++.++.+|+++.+..            ++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAG-WSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            799999999999999999999999 999999985422211111111113688899999986432            4899


Q ss_pred             EEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHHH----HcC-C-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060          101 IYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG-A-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus       101 vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |||+||.... .    ...+++...+++|+.++..+.+++.    +.+ . ++|++||...+.                +
T Consensus       101 lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~----------------~  164 (272)
T 2nwq_A          101 LINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKW----------------P  164 (272)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTS----------------C
T ss_pred             EEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhcc----------------C
Confidence            9999997542 1    1234567788999999888776653    333 4 999999987653                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+   .++++++++||.+.++....    .+..   . . .......    ....++.
T Consensus       165 ~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~----~~~~---~-~-~~~~~~~----~~~~~~~  231 (272)
T 2nwq_A          165 YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV----RFGG---D-Q-ARYDKTY----AGAHPIQ  231 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------------CCCCBC
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc----cccc---c-h-HHHHHhh----ccCCCCC
Confidence            223357999999999999988765   37999999999998764210    0000   0 0 0000000    0112578


Q ss_pred             HHHHHHHHHHHHhCCC
Q 019060          247 VSDMVDGLIRLMEGEN  262 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~  262 (346)
                      .+|+|++++.++..+.
T Consensus       232 pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          232 PEDIAETIFWIMNQPA  247 (272)
T ss_dssp             HHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            9999999999998654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.82  E-value=1e-19  Score=158.04  Aligned_cols=201  Identities=14%  Similarity=0.070  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+......  ....+.++.+|+++.+..            
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEG-YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999 999999986432222111111  112358899999997542            


Q ss_pred             CCCEEEEcccCCCcc-----ccccChHHHHHHHHHHHHHHHHHHH----HcC---CeEEEEecccccCCCCCCCCCCCCc
Q 019060           97 EVDQIYHLACPASPI-----FYKYNPVKTIKTNVIGTLNMLGLAK----RVG---ARILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~---~r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                      ++|++||+||.....     ...++++..+++|+.++..+.+++.    +.+   .++|++||...+.            
T Consensus       111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------  178 (281)
T 4dry_A          111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT------------  178 (281)
T ss_dssp             CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC------------
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC------------
Confidence            589999999975431     1235567789999999888777653    332   3899999987652            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +..+...|+.+|.+.+.+.+.++.+   .++++.+++||.+..+...            .....  ..........
T Consensus       179 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~------------~~~~~--~~~~~~~~~~  240 (281)
T 4dry_A          179 ----PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA------------RMSTG--VLQANGEVAA  240 (281)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------------------CE--EECTTSCEEE
T ss_pred             ----CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh------------hhcch--hhhhhhcccc
Confidence                2334467999999999999988876   4789999999999876311            01000  0000001112


Q ss_pred             eecccHHHHHHHHHHHHhCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      ..++.++|+|++++.++..+.
T Consensus       241 ~~~~~pedvA~~v~fL~s~~~  261 (281)
T 4dry_A          241 EPTIPIEHIAEAVVYMASLPL  261 (281)
T ss_dssp             CCCBCHHHHHHHHHHHHHSCT
T ss_pred             cCCCCHHHHHHHHHHHhCCCc
Confidence            347899999999999998776

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.82  E-value=4.1e-19  Score=152.16  Aligned_cols=214  Identities=14%  Similarity=0.043  Sum_probs=149.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhh-hhc-CCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR-KWI-GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|+++.+.......... ... ....+.++.+|+.+....            
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDG-ALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCC-CeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999 999886543322222221 111 124677899999986432            


Q ss_pred             ------CCCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCC
Q 019060           97 ------EVDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                            .+|++||+||.......    .++....+++|+.++..+++++...   +.++|++||...+.           
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~-----------  153 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI-----------  153 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS-----------
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc-----------
Confidence                  28999999997654332    2345677899999999999998764   23899999987653           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|.+.+.+.+.++.+.   ++++.+++||.+..+........  ...........+         
T Consensus       154 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~---------  217 (255)
T 3icc_A          154 -----SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD--PMMKQYATTISA---------  217 (255)
T ss_dssp             -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS--HHHHHHHHHTST---------
T ss_pred             -----CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc--HHHHHhhhccCC---------
Confidence                 22234679999999999999888764   79999999999988754322111  111111111111         


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ...+..++|+|++++.++....    +..+++.+|.
T Consensus       218 ~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          218 FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            1246789999999999886432    5578887764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.82  E-value=3.1e-19  Score=153.52  Aligned_cols=162  Identities=17%  Similarity=0.074  Sum_probs=121.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++|+............. ..++.++.+|+++.+..            +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999 9999999854222111111111 23578899999987432            6


Q ss_pred             CCEEEEcccCC-Cccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|+|||+||.. ....    ..+++...+++|+.++.++++++..    .+. ++|++||...+..              
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------  150 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG--------------  150 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC--------------
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC--------------
Confidence            99999999965 2211    2345677889999999998887654    344 8999999876532              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGP  209 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~  209 (346)
                        ......|+.+|...+.+.+.++.+   .++++++++||.+..+
T Consensus       151 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~  193 (262)
T 1zem_A          151 --PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG  193 (262)
T ss_dssp             --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence              122357999999999998888765   3799999999988765

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.81  E-value=2.4e-18  Score=144.02  Aligned_cols=208  Identities=16%  Similarity=0.120  Sum_probs=149.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .+|++|||||++.||+.+++.|.++| ..|++.+|+......     ....++..+.+|+++.+..        ++|++|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~G-a~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV   83 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELG-AEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFEALPRLDVLV   83 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            47999999999999999999999999 999999996533221     1235788999999997543        699999


Q ss_pred             EcccCCCccc--cccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCch
Q 019060          103 HLACPASPIF--YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCY  176 (346)
Q Consensus       103 ~~a~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y  176 (346)
                      ||||...+..  ..++++..+++|+.++..+.+++.    +.+.++|++||....-                +......|
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----------------~~~~~~~Y  147 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF----------------GSADRPAY  147 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS----------------CCSSCHHH
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC----------------CCCCCHHH
Confidence            9999765432  235678899999999988877653    3345999999987642                22223579


Q ss_pred             HHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHH
Q 019060          177 DEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       177 ~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      +.+|.....+.+.++.+.   ++++..|.||.|..|........  +...+.....-++.         .+...+|+|++
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~--~~~~~~~~~~~Plg---------R~g~peeiA~~  216 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD--VEATRRIMQRTPLA---------RWGEAPEVASA  216 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC--HHHHHHHHHTCTTC---------SCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC--HHHHHHHHhcCCCC---------CCcCHHHHHHH
Confidence            999999999999888764   78999999999987642211111  22333333333332         35578999999


Q ss_pred             HHHHHhCCC----CCcEEecCC
Q 019060          254 LIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       254 i~~~~~~~~----~~~~~~~~~  271 (346)
                      ++.++....    +..+.+.+|
T Consensus       217 v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          217 AAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhcCccCceEEECcc
Confidence            999886543    445666654

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.81  E-value=1.3e-19  Score=155.85  Aligned_cols=216  Identities=12%  Similarity=0.034  Sum_probs=143.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--Ccchhhhhc-C-CCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--SKDNLRKWI-G-HPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--~~~~~~~~~-~-~~~~~~~~~d~~~~~~~----------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|....  ..+.+...+ . ..++.++.+|+++.+..          
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALES-VNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSS-CEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999 999998875321  111111111 1 24688899999997542          


Q ss_pred             --CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 --EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                        ++|++||+||......    ..++....+++|+.++..+++++...   +.++|++||...+..              
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~--------------  154 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY--------------  154 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH--------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC--------------
Confidence              5999999999765433    23456678899999999999998764   238999999876531              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                        ......|+.+|...+.+.+.++.+.   ++++.+++||.+..+.....            .................+
T Consensus       155 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------------~~~~~~~~~~~~~~~~r~  220 (262)
T 3ksu_A          155 --TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ------------ETKESTAFHKSQAMGNQL  220 (262)
T ss_dssp             --HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC------------C------------CCCCS
T ss_pred             --CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc------------CchHHHHHHHhcCcccCC
Confidence              1223569999999999999998875   78999999998875421000            000000000111122357


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCcEEecCCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~s  275 (346)
                      ..++|+|++++.++....   +..+++.+|....
T Consensus       221 ~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~~~  254 (262)
T 3ksu_A          221 TKIEDIAPIIKFLTTDGWWINGQTIFANGGYTTR  254 (262)
T ss_dssp             CCGGGTHHHHHHHHTTTTTCCSCEEEESTTCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCccCCEEEECCCccCC
Confidence            789999999999987622   4467777765443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.81  E-value=1.4e-18  Score=148.79  Aligned_cols=212  Identities=14%  Similarity=0.076  Sum_probs=140.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcc---------cCCCCEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPL---------LIEVDQIY  102 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~---------~~~~d~vi  102 (346)
                      +++|||||+|+||++++++|+++| ++|++++|+..... ....... ..++..+  |..+..         ..++|+||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAG-HTVACHDESFKQKD-ELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSHH-HHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEE
Confidence            589999999999999999999999 99999998643322 1111100 1123322  333211         12699999


Q ss_pred             EcccCC-Cccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+||.. ....    ..++....+++|+.++..+++++.    +.+ .++|++||...+.                +..+
T Consensus        78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~  141 (254)
T 1zmt_A           78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----------------PWKE  141 (254)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----------------CCTT
T ss_pred             ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccccc----------------CCCC
Confidence            999976 3221    234567788999999999888763    334 4999999987653                1223


Q ss_pred             CCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-ccHH---HHHHHHHHcCCCeEEecCCcceeecc
Q 019060          173 RSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-GRVV---SNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ...|+.+|...+.+.+.++.+.   ++++++++||.++|+...... +.+.   +..........+         ...+.
T Consensus       142 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p---------~~~~~  212 (254)
T 1zmt_A          142 LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA---------LQRLG  212 (254)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS---------SSSCB
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC---------CCCCc
Confidence            3579999999999999887764   799999999999887532211 1110   111111111111         12367


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +++|+|++++.++..+.    +..+++.++..
T Consensus       213 ~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          213 TQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             CHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            89999999999987643    44677776643

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.81  E-value=2.3e-18  Score=145.19  Aligned_cols=203  Identities=15%  Similarity=0.172  Sum_probs=146.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      |+|+||||||++.||++++++|++.| +.|++.+|+..    ...+.. ...++..+.+|+++++..            +
T Consensus         1 MnK~vlVTGas~GIG~aia~~la~~G-a~V~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            1 MNRGVIVTGGGHGIGKQICLDFLEAG-DKVCFIDIDEK----RSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHH----HHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEeCCHH----HHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999 99999998532    222221 234688899999997443            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++|||||......    ..++++..+++|+.++..+.+++.    +.+.++|++||...+.                +
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~----------------~  139 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----------------S  139 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS----------------C
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc----------------C
Confidence            999999999765433    235678889999999988877653    4455999999987652                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      ......|+.+|.....+.+.++.+.  ++++..|.||.+--+...        .+.......-++         ..+...
T Consensus       140 ~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~--------~~~~~~~~~~Pl---------~R~g~p  202 (247)
T 3ged_A          140 EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQ--------EFTQEDCAAIPA---------GKVGTP  202 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC-----------CCHHHHHTSTT---------SSCBCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcH--------HHHHHHHhcCCC---------CCCcCH
Confidence            2223569999999999999888765  688999999998765421        111122222111         135678


Q ss_pred             HHHHHHHHHHHhCCC--CCcEEecCC
Q 019060          248 SDMVDGLIRLMEGEN--TGPINIGNP  271 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~--~~~~~~~~~  271 (346)
                      +|+|++++.++...-  +..+.+.+|
T Consensus       203 ediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          203 KDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             HHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEECcC
Confidence            999999999987543  446777665

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.81  E-value=1.4e-18  Score=151.69  Aligned_cols=212  Identities=12%  Similarity=0.011  Sum_probs=148.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe-CCCCCCcchhhhhc--CCCCeeEEecccCCcc-------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKWI--GHPRFELIRHDVTEPL-------------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~-------------   94 (346)
                      .++++|||||+|+||++++++|+++| +.|++++ |+..........+.  ...++.++.+|+.+.+             
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            36799999999999999999999999 9999998 75322111111111  1246889999999877             


Q ss_pred             ----cC------------CCCEEEEcccCCCccc----c--------------ccChHHHHHHHHHHHHHHHHHHH----
Q 019060           95 ----LI------------EVDQIYHLACPASPIF----Y--------------KYNPVKTIKTNVIGTLNMLGLAK----  136 (346)
Q Consensus        95 ----~~------------~~d~vi~~a~~~~~~~----~--------------~~~~~~~~~~n~~~~~~l~~~~~----  136 (346)
                          ..            ++|++||+||......    .              .++....+++|+.++..+++++.    
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~  166 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  166 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence                32            5999999999754322    1              33456788999999999888764    


Q ss_pred             HcC-------CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccc
Q 019060          137 RVG-------ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNT  206 (346)
Q Consensus       137 ~~~-------~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i  206 (346)
                      +.+       .++|++||...+.                +......|+.+|...+.+.+.++.+.   ++++++++||.+
T Consensus       167 ~~~~~~~~~~g~Iv~isS~~~~~----------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v  230 (291)
T 1e7w_A          167 GTPAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS  230 (291)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             hcCCCCCCCCcEEEEEechhhcC----------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCc
Confidence            333       3899999987653                22234579999999999999887763   789999999998


Q ss_pred             cCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+. .  ..   +..........++.        ..+..++|+|++++.++....    +..+++.+|..
T Consensus       231 ~T~~-~--~~---~~~~~~~~~~~p~~--------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          231 VLVD-D--MP---PAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             CCGG-G--SC---HHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCc-c--CC---HHHHHHHHhhCCCC--------CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            7664 2  11   22222222211110        036688999999999986432    44677766643

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.81  E-value=1.8e-18  Score=150.21  Aligned_cols=215  Identities=13%  Similarity=0.068  Sum_probs=147.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+.....+ +.... ..++.++.+|+++.+..            ++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEG-ARVAVLDKSAERLRE-LEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHH-HHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999 999999985422211 11112 24688999999987432            69


Q ss_pred             CEEEEcccCCCcccc---------ccChHHHHHHHHHHHHHHHHHHHH----cCCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPIFY---------KYNPVKTIKTNVIGTLNMLGLAKR----VGARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~----~~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |++||+||.......         .+..+..+++|+.++..+++++..    .+.++|++||...+.             
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------  147 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY-------------  147 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-------------
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc-------------
Confidence            999999997542211         123567888999999999887643    345899999987652             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHH------HHHHHHcCCCeEEecC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSN------FIAQAIRGEPLTVQAP  237 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~  237 (346)
                         +......|+.+|...+.+.+.++.+..  +++..++||.+..+............      .........+      
T Consensus       148 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------  218 (281)
T 3zv4_A          148 ---PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP------  218 (281)
T ss_dssp             ---SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT------
T ss_pred             ---CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC------
Confidence               223335699999999999999887753  88999999999876432111000000      1111111111      


Q ss_pred             CcceeecccHHHHHHHHHHHHh-CCC----CCcEEecCCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLME-GEN----TGPINIGNPGE  273 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~-~~~----~~~~~~~~~~~  273 (346)
                         ...+..++|+|++++.++. ...    +..+++.+|..
T Consensus       219 ---~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          219 ---IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             ---TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred             ---CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence               1246788999999999997 332    45677777643

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.79  E-value=8e-18  Score=146.40  Aligned_cols=198  Identities=13%  Similarity=0.012  Sum_probs=141.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc------hhhhhc--CCCCeeEEecccCCcccC-----
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------NLRKWI--GHPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~------~~~~~~--~~~~~~~~~~d~~~~~~~-----   96 (346)
                      ..++++|||||+|+||++++++|+++| +.|++++|+......      .....+  ...++.++.+|+++.+..     
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADG-ANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            346899999999999999999999999 999999997543211      111111  124688999999997532     


Q ss_pred             -------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEecccccCCCCCCCCC
Q 019060           97 -------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----G-ARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 -------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~r~i~~SS~~v~~~~~~~~~~  160 (346)
                             ++|++||+||......    ..++....+++|+.++..+++++...    + .++|++||...+..       
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------  158 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP-------  158 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG-------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC-------
Confidence                   6999999999765332    23445678889999999999988654    3 38999999765421       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                              ...+...|+.+|...+.+.+.++.+   .++++.+++||.+...           .+.........      
T Consensus       159 --------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-----------~~~~~~~~~~~------  213 (285)
T 3sc4_A          159 --------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-----------AAVQNLLGGDE------  213 (285)
T ss_dssp             --------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-----------HHHHHHHTSCC------
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-----------HHHHhhccccc------
Confidence                    1122367999999999999998876   4799999999843321           11222222211      


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                        ....+...+|+|++++.++..+.
T Consensus       214 --~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          214 --AMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             --CCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             --cccCCCCHHHHHHHHHHHhCCcc
Confidence              11246688999999999998654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.79  E-value=6.2e-18  Score=143.13  Aligned_cols=213  Identities=13%  Similarity=0.041  Sum_probs=148.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||++.||+.+++.|.++| ..|++++|+.....+...++.. ..++..+.+|+++++..            +
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~G-a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALND-SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 9999999864322222222211 24688899999997543            6


Q ss_pred             CCEEEEcccCCCc-c----ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-I----FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++|||||.... .    ...++++..+++|+.++..+.+++    ++.+. ++|++||...+-               
T Consensus        85 iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~---------------  149 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR---------------  149 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC---------------
T ss_pred             CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC---------------
Confidence            9999999996532 1    133567889999999998887765    33444 999999987642               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-cc-H-HHHHHHHHHcCCCeEEecCCcce
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-GR-V-VSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                       +......|+.+|.....+.+.++.+.   ++++..|.||.|-.+...... .. . ...+... .  .++         
T Consensus       150 -~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~-~--~~~---------  216 (254)
T 4fn4_A          150 -GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKL-M--SLS---------  216 (254)
T ss_dssp             -SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHH-H--TTC---------
T ss_pred             -CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhc-C--CCC---------
Confidence             22223569999999999999888764   789999999999766432111 11 1 1111111 1  111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..+...+|+|.+++.++....    +..+.+.+|-
T Consensus       217 ~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          217 SRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            124568999999999886543    4466666653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.79  E-value=5.1e-19  Score=150.85  Aligned_cols=193  Identities=19%  Similarity=0.120  Sum_probs=137.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEeccc--CCccc-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDV--TEPLL-----------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~--~~~~~-----------   95 (346)
                      .++++|||||+|+||++++++|+++| ++|++++|+...........  .......++.+|+  .+.+.           
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHG-ASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCC-CEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            46899999999999999999999999 99999998643222211111  1124567777777  55422           


Q ss_pred             -CCCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           96 -IEVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       .++|++||+||......     ..+++...+++|+.++..+++++    ++.+. ++|++||...+.            
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------  159 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRK------------  159 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTS------------
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcC------------
Confidence             16999999999753211     23456788899999999999887    44444 899999987653            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                          +..+...|+.+|...+.+.+.++.+.    ++++..++||.+..+.            .......         ..
T Consensus       160 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~------------~~~~~~~---------~~  214 (247)
T 3i1j_A          160 ----GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM------------RAQAYPD---------EN  214 (247)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH------------HHHHSTT---------SC
T ss_pred             ----CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc------------chhcccc---------cC
Confidence                22334679999999999999888764    5788899998876531            1111111         11


Q ss_pred             eeecccHHHHHHHHHHHHhCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      ...+...+|+|++++.++...
T Consensus       215 ~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          215 PLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             GGGSCCGGGGTHHHHHHHSGG
T ss_pred             ccCCCCHHHHHHHHHHHhCch
Confidence            224567899999999998754

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.78  E-value=1.2e-17  Score=142.00  Aligned_cols=218  Identities=17%  Similarity=0.131  Sum_probs=150.2

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .-.+|++|||||++.||+++++.|.++| ..|++.+|+.... +...... ...++.++.+|+++.+..           
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~G-a~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~   81 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEER-AIPVVFARHAPDG-AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF   81 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCCH-HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCcccH-HHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence            3457999999999999999999999999 9999999975432 2222211 134688999999997433           


Q ss_pred             -CCCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 -EVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                       ++|++|||||......   ..+++...+++|+.++..+.+++    ++.+.++|++||...+.                
T Consensus        82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~----------------  145 (258)
T 4gkb_A           82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT----------------  145 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH----------------
T ss_pred             CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc----------------
Confidence             6999999999754332   23456788899999988887765    34455999999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCc--cHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..|.||.|..|.......  .............-++.        ..
T Consensus       146 ~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg--------~R  217 (258)
T 4gkb_A          146 GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG--------RR  217 (258)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT--------TS
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC--------CC
Confidence            12223569999999999999888764   7999999999998764321100  00011122222221110        13


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      +...+|+|++++.++....    +..+.+.+|-
T Consensus       218 ~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          218 FTTPDEIADTAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEEECCCc
Confidence            5678999999999886543    4467776654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.78  E-value=4.5e-18  Score=147.15  Aligned_cols=197  Identities=12%  Similarity=0.070  Sum_probs=138.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc---hhhh---hc--CCCCeeEEecccCCcccC-----
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD---NLRK---WI--GHPRFELIRHDVTEPLLI-----   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~~~~---~~--~~~~~~~~~~d~~~~~~~-----   96 (346)
                      ..+|++|||||+|+||++++++|+++| +.|++++|+......   .+.+   ..  ...++.++.+|+++.+..     
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDG-ANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCC-CEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            357899999999999999999999999 999999997543211   1111   11  124678899999997542     


Q ss_pred             -------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEecccccCCCCCCCCC
Q 019060           97 -------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VG-ARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 -------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~r~i~~SS~~v~~~~~~~~~~  160 (346)
                             ++|++||+||......    ..++....+++|+.++..+.+++..    .+ .++|++||...+...      
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------  156 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA------  156 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH------
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC------
Confidence                   6999999999764332    2245577889999999999887643    33 389999998754210      


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                              +......|+.+|...+.+.+.++.+.   ++++.+++||.+....       +.     ....+.       
T Consensus       157 --------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~-------~~-----~~~~~~-------  209 (274)
T 3e03_A          157 --------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD-------AI-----NMLPGV-------  209 (274)
T ss_dssp             --------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------CC-------
T ss_pred             --------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc-------hh-----hhcccc-------
Confidence                    01223569999999999999888764   7999999998543321       00     011111       


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                        ....+...+|+|++++.++....
T Consensus       210 --~~~~~~~pedvA~~v~~l~s~~~  232 (274)
T 3e03_A          210 --DAAACRRPEIMADAAHAVLTREA  232 (274)
T ss_dssp             --CGGGSBCTHHHHHHHHHHHTSCC
T ss_pred             --cccccCCHHHHHHHHHHHhCccc
Confidence              11236789999999999997654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.78  E-value=1e-17  Score=142.46  Aligned_cols=208  Identities=13%  Similarity=0.063  Sum_probs=136.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-e--CCCCCCcchhhhhcCCCCeeEEecccCCc---------ccCCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-D--NYFTGSKDNLRKWIGHPRFELIRHDVTEP---------LLIEVD   99 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~d~~~~---------~~~~~d   99 (346)
                      +|++|||||+|+||++++++|+++| ++|+++ +  |+..... .....+  .+.+..  |..+.         ...++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~~~~r~~~~~~-~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDG-YTVVCHDASFADAAERQ-RFESEN--PGTIAL--AEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSHHHHH-HHHHHS--TTEEEC--CCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCC-CEEEEecCCcCCHHHHH-HHHHHh--CCCccc--CHHHHHHHHHHHHHHcCCCC
Confidence            3689999999999999999999999 999998 5  7532211 111111  122322  22221         112699


Q ss_pred             EEEEcccCCCc---cc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060          100 QIYHLACPASP---IF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus       100 ~vi~~a~~~~~---~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|||+||....   ..    ..++....+++|+.++..+++++.    +.+. ++|++||...+..              
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~--------------  140 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKP--------------  140 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC--------------
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCC--------------
Confidence            99999997643   21    234567789999999999888764    4444 8999999887632              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH-HHHHHHHHc-CCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIR-GEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~  242 (346)
                        ......|+.+|...+.+.+.++.+.   ++++++++||.+..+.... ..... ......... ..+         ..
T Consensus       141 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~p---------~~  208 (244)
T 1zmo_A          141 --LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP-TSDWENNPELRERVDRDVP---------LG  208 (244)
T ss_dssp             --CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC-HHHHHHCHHHHHHHHHHCT---------TC
T ss_pred             --CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc-cccccchHHHHHHHhcCCC---------CC
Confidence              2233569999999999999887763   7899999999988764200 01110 011111111 111         11


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+...+|+|++++.++....    +..+.+.+|
T Consensus       209 r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          209 RLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             SCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            36789999999999997643    335666554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.78  E-value=5.2e-18  Score=149.55  Aligned_cols=211  Identities=15%  Similarity=0.044  Sum_probs=142.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCc-ccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEP-LLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~-~~~-----------   96 (346)
                      .+++||||||+|+||++++++|+++| +.|++++|+.....+...++..  ..++.++.+|+++. +..           
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999 9999999965333322222222  24688999999997 422           


Q ss_pred             -CCCEEEEcccCCCcc----------------------------------ccccChHHHHHHHHHHHHHHHHHHH----H
Q 019060           97 -EVDQIYHLACPASPI----------------------------------FYKYNPVKTIKTNVIGTLNMLGLAK----R  137 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~----------------------------------~~~~~~~~~~~~n~~~~~~l~~~~~----~  137 (346)
                       ++|+|||+||.....                                  ...+.....+++|+.++..+++++.    +
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence             699999999976421                                  1123345678999999888888764    3


Q ss_pred             cC-CeEEEEecccccCCCCCC-----------CC----------------CCCCcCCCCCCCCCCchHHhHHHHHHHHHH
Q 019060          138 VG-ARILLTSTSEVYGDPLVH-----------PQ----------------DESYWGNVNPIGVRSCYDEGKRVAETLMFD  189 (346)
Q Consensus       138 ~~-~r~i~~SS~~v~~~~~~~-----------~~----------------~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~  189 (346)
                      .+ .++|++||...+......           ..                .+..........+...|+.+|.+.+.+.+.
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            33 399999998754321000           00                000000001112335799999999999999


Q ss_pred             HHHHh-CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CCc
Q 019060          190 YHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGP  265 (346)
Q Consensus       190 ~~~~~-~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~  265 (346)
                      ++.+. ++++.+++||.|..+....                            ......++.++.++.++..+.   .+.
T Consensus       250 la~e~~~i~v~~v~PG~v~T~~~~~----------------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~  301 (311)
T 3o26_A          250 LANKIPKFQVNCVCPGLVKTEMNYG----------------------------IGNYTAEEGAEHVVRIALFPDDGPSGF  301 (311)
T ss_dssp             HHHHCTTSEEEEECCCSBCSGGGTT----------------------------CCSBCHHHHHHHHHHHHTCCSSCCCSC
T ss_pred             HHhhcCCceEEEecCCceecCCcCC----------------------------CCCCCHHHHHHHHHHHHhCCCCCCCce
Confidence            98875 5889999999887653110                            012467899999998887554   456


Q ss_pred             EEecC
Q 019060          266 INIGN  270 (346)
Q Consensus       266 ~~~~~  270 (346)
                      |...+
T Consensus       302 ~~~~s  306 (311)
T 3o26_A          302 FYDCS  306 (311)
T ss_dssp             EETC-
T ss_pred             Eeccc
Confidence            66554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.77  E-value=2.1e-17  Score=147.18  Aligned_cols=205  Identities=13%  Similarity=0.060  Sum_probs=144.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc------h-hhhhc-CCCCeeEEecccCCcccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD------N-LRKWI-GHPRFELIRHDVTEPLLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~------~-~~~~~-~~~~~~~~~~d~~~~~~~------   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+......      . ..... ...++.++.+|+++.+..      
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~G-a~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDG-ANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCC-CEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            46899999999999999999999999 999999997543211      1 11111 124678899999997532      


Q ss_pred             ------CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCC
Q 019060           97 ------EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 ------~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e  161 (346)
                            ++|+|||+||......    ..++....+++|+.++..+++++.    +.+. ++|++||...+..        
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~--------  194 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP--------  194 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG--------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC--------
Confidence                  6999999999754332    234557789999999999999873    3343 8999999876531        


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            .+......|+.+|...+.+.+.++.+.  ++++..+.|+.+....           +... ..+.        .
T Consensus       195 ------~~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-----------~~~~-~~~~--------~  248 (346)
T 3kvo_A          195 ------VWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-----------AMDM-LGGP--------G  248 (346)
T ss_dssp             ------GGTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-----------HHHH-HCC----------
T ss_pred             ------CCCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-----------HHHh-hccc--------c
Confidence                  012334679999999999999988774  6889999998644321           1121 1111        1


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC--CCcEEecC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN--TGPINIGN  270 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~  270 (346)
                      ....+..++|+|++++.++....  .|.+.+.+
T Consensus       249 ~~~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          249 IESQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             CGGGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             ccccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            12246688999999999998732  55554443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.77  E-value=3e-17  Score=137.71  Aligned_cols=210  Identities=12%  Similarity=0.052  Sum_probs=148.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-------CCCEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-------EVDQI  101 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-------~~d~v  101 (346)
                      -.+|++|||||++.||+.+++.|.++| ..|++.+|+..  .+...... ...++..+.+|++|+...       ++|++
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~G-a~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL   83 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAG-AEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL   83 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcC-CEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence            357999999999999999999999999 99999998643  12222111 124678899999997544       59999


Q ss_pred             EEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       102 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |||||......    ..++++..+++|+.++..+.+++    .+.+  .++|++||...+.                +..
T Consensus        84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~----------------g~~  147 (247)
T 4hp8_A           84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ----------------GGI  147 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCS
T ss_pred             EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC----------------CCC
Confidence            99999765433    33567889999999999888764    3333  3899999987642                122


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ....|+.+|.....+.+.++.+.   ++++..|.||.|-.|...    ...  ....+.+...-++.         .+-.
T Consensus       148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~----~~~~~~~~~~~~~~~~Plg---------R~g~  214 (247)
T 4hp8_A          148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE----ALRADAARNKAILERIPAG---------RWGH  214 (247)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGH----HHHTSHHHHHHHHTTCTTS---------SCBC
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchh----hcccCHHHHHHHHhCCCCC---------CCcC
Confidence            23569999999999999887764   789999999998766311    111  11222233322222         3556


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+|+|.+++.++....    +..+.+.+|
T Consensus       215 peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          215 SEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence            7999999999886543    445666654

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.76  E-value=3.7e-18  Score=144.59  Aligned_cols=211  Identities=17%  Similarity=0.074  Sum_probs=148.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||++.||+.+++.|.++| ..|++.+|+.....+...++.. ..++..+.+|+++++..            +
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            47899999999999999999999999 9999999854322222222221 24678899999997433            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----H-cC-CeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----R-VG-ARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~-~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++|||||......    ..++++..+++|+.++..+.+++.    + .+ .++|++||...+.               
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~---------------  151 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA---------------  151 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS---------------
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC---------------
Confidence            999999999765433    335678899999999988877652    2 23 3999999987652               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +......|+.+|.....+.+.++.+.   ++++..|.||.|..+...    ...  ..+.......-++.         
T Consensus       152 -~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~----~~~~~~~~~~~~~~~~Pl~---------  217 (255)
T 4g81_D          152 -ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT----ALIEDKQFDSWVKSSTPSQ---------  217 (255)
T ss_dssp             -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGH----HHHTCHHHHHHHHHHSTTC---------
T ss_pred             -CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhh----cccCCHHHHHHHHhCCCCC---------
Confidence             22223569999999999999888764   789999999999866321    111  11122222222221         


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+...+|+|.+++.++....    +..+.+.+|
T Consensus       218 R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          218 RWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            25567999999999886543    445666654

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.76  E-value=2.1e-18  Score=148.13  Aligned_cols=203  Identities=9%  Similarity=-0.029  Sum_probs=137.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHh---cCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC---------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~---------   96 (346)
                      ++++|||||+|+||++++++|++   .| ++|++++|+.........+..   ...++.++.+|+++.+..         
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G-~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTT-CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCC-CeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            57899999999999999999999   89 999999986422221111111   124578899999986321         


Q ss_pred             -----CCC--EEEEcccCCCc--c-----ccccChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEecccccCCCC
Q 019060           97 -----EVD--QIYHLACPASP--I-----FYKYNPVKTIKTNVIGTLNMLGLAKRV------G-ARILLTSTSEVYGDPL  155 (346)
Q Consensus        97 -----~~d--~vi~~a~~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~------~-~r~i~~SS~~v~~~~~  155 (346)
                           ++|  ++||+||....  .     ...+++...+++|+.++..+++++...      + .++|++||...+.   
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~---  161 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ---  161 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC---
Confidence                 368  99999997532  1     123456788999999999999988542      2 2799999988763   


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh-CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCC-eE
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEP-LT  233 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~-~~  233 (346)
                                   +..+...|+.+|...+.+.+.++.+. ++++.+++||.+-.+.        ...+... ..... ..
T Consensus       162 -------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~--------~~~~~~~-~~~~~~~~  219 (259)
T 1oaa_A          162 -------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDM--------QQLARET-SKDPELRS  219 (259)
T ss_dssp             -------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHH--------HHHHHHH-CSCHHHHH
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcch--------HHHHhhc-cCChhHHH
Confidence                         22334679999999999999998775 3778888888775431        1111100 00000 00


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhC
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ..........+..++|+|++++.++..
T Consensus       220 ~~~~~~p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          220 KLQKLKSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence            000000012467899999999998874

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.75  E-value=2e-17  Score=141.36  Aligned_cols=214  Identities=13%  Similarity=0.092  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|.+|||||++.||+.+++.|.++| ..|++.+|+.....+...++  ..+...+.+|+++.+..            ++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~G-a~V~i~~r~~~~l~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEG-ARVFITGRRKDVLDAAIAEI--GGGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHc--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999 99999998643322222222  24677899999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++|||||......    ..++++..+++|+.++..+.+++...   +.++|++||...+.                +..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----------------~~~  168 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----------------GTP  168 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----------------CCT
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----------------CCC
Confidence            99999999755432    33567889999999999999887543   12799999987642                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-cc--HHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-GR--VVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      ....|+.+|.....+.+.++.+.   ++++..|.||.+..+...... ..  ....+...+...-++.         .+.
T Consensus       169 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg---------R~g  239 (273)
T 4fgs_A          169 AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG---------RVG  239 (273)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS---------SCB
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC---------CCc
Confidence            23579999999999999988775   689999999998776422110 00  1112222222222221         355


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..+|+|++++.++....    +..+.+.+|.
T Consensus       240 ~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          240 RAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            78999999999986543    4466666653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.75  E-value=2.3e-17  Score=152.08  Aligned_cols=210  Identities=13%  Similarity=0.025  Sum_probs=145.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------C-
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------E-   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~-   97 (346)
                      .++++|||||+|.||.++++.|.++| .+|++++|+.  ..+.+.+.....++.++.+|+++.+..            + 
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~G-a~Vvl~~r~~--~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDG-ATVVAIDVDG--AAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEECGG--GHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCC-CEEEEEeCCc--cHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 8999998853  222232222223567899999997432            3 


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV----GA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|+|||+||......    ..++....+++|+.++.++.+++...    +. +||++||...+.                
T Consensus       289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~----------------  352 (454)
T 3u0b_A          289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIA----------------  352 (454)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHH----------------
T ss_pred             ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCC----------------
Confidence            999999999765432    23456778999999999999998764    33 899999987542                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      .......|+.+|...+.+.+.++.+   .+++++++.||.+..+....     +...........        .....+.
T Consensus       353 g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~~--------~~l~r~g  419 (454)
T 3u0b_A          353 GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEA-----IPLATREVGRRL--------NSLFQGG  419 (454)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------CHHHHHS--------BTTSSCB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhh-----cchhhHHHHHhh--------ccccCCC
Confidence            1123357999999999988887765   37999999999998764211     011000000000        0112345


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..+|+|++++.++....    +..+++.++.
T Consensus       420 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          420 QPVDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             CHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             CHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            78999999999887543    4467776653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.75  E-value=2.6e-17  Score=142.04  Aligned_cols=215  Identities=13%  Similarity=0.066  Sum_probs=144.3

Q ss_pred             CCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------   96 (346)
                      .++++|||||  +|+||++++++|+++| ++|++++|+.....+.+.+.+ ..++.++.+|+++.+..            
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQG-AQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTT-CEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCC-CEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3679999999  9999999999999999 999999985422112222222 13578899999986421            


Q ss_pred             ---CCCEEEEcccCCCc-----c----ccccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASP-----I----FYKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~-----~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e  161 (346)
                         ++|++||+||....     .    ...++....+++|+.++..+++++...   +.++|++||...++         
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~---------  154 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA---------  154 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC---------
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc---------
Confidence               68999999997541     1    123456678899999999999998653   23899999876432         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC----CccH----HHHHHHHHHcCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID----DGRV----VSNFIAQAIRGE  230 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~----~~~~----~~~~~~~~~~~~  230 (346)
                              ......|+.+|...+.+.+.++.+.   ++++++++||.+..+.....    ....    ............
T Consensus       155 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (269)
T 2h7i_A          155 --------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA  226 (269)
T ss_dssp             --------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred             --------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC
Confidence                    1123569999999999999887764   79999999998875421000    0000    000111111111


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ++        .+.+...+|+|++++.++....   .| .+.+.+|.
T Consensus       227 p~--------~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  264 (269)
T 2h7i_A          227 PI--------GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  264 (269)
T ss_dssp             TT--------CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             Cc--------ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence            11        0136678999999999997543   34 56666653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.74  E-value=2.8e-18  Score=152.03  Aligned_cols=168  Identities=12%  Similarity=0.090  Sum_probs=117.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-------eEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCC-----cccCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-------EVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTE-----PLLIEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-------~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~   98 (346)
                      .|||+||||+||||++++..|++.| +       +|+++++... .........+....+.++ .|+.+     ....++
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g-~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~   81 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGE-MLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDA   81 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTT-TTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCC
Confidence            5799999999999999999999988 5       8999987431 000110001111111222 33332     234479


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEecccc-cCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSEV-YGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                      |+|||+||....  ...++...++.|+.++.++++++++.+ .  +++++|+... ..     +..++..   ....|..
T Consensus        82 D~Vih~Ag~~~~--~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~---~~~~p~~  151 (327)
T 1y7t_A           82 DYALLVGAAPRK--AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNA---PGLNPRN  151 (327)
T ss_dssp             SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTC---TTSCGGG
T ss_pred             CEEEECCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHc---CCCChhh
Confidence            999999997542  245678899999999999999999875 3  7888887541 10     0111100   1234556


Q ss_pred             chHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCC
Q 019060          175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRM  211 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~  211 (346)
                      .|+.+|...|++...+++..+++.+++|++++|||+.
T Consensus       152 ~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~  188 (327)
T 1y7t_A          152 FTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS  188 (327)
T ss_dssp             EEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred             eeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence            7999999999999999888899999999999999864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.74  E-value=1.4e-17  Score=147.60  Aligned_cols=215  Identities=17%  Similarity=0.121  Sum_probs=141.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--------CCCCeeEEecccCCcccC-------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--------GHPRFELIRHDVTEPLLI-------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~d~~~~~~~-------   96 (346)
                      +++||||||+|+||++++++|+++| +.|+++.|+...... .....        ...++.++.+|+++.+..       
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G-~~v~~v~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   79 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDP-SQSFKVYATLRDLKT-QGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT-TCCEEEEEEESCGGG-THHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CceEEEEeecCcHHH-HHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999 888887765322211 11111        124688999999986432       


Q ss_pred             ---CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 ---EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                         ++|+||||||......    ..++....+++|+.++.++++++    ++.+. +||++||...+..           
T Consensus        80 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~-----------  148 (327)
T 1jtv_A           80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----------  148 (327)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----------
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccC-----------
Confidence               4999999999654322    23456788999999999999885    44454 9999999876531           


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccH----------HHHHHHHHHcCCC
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRV----------VSNFIAQAIRGEP  231 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~----------~~~~~~~~~~~~~  231 (346)
                           ......|+.+|...|.+.+.++.+   .++++++++||.+..+.........          ....+........
T Consensus       149 -----~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (327)
T 1jtv_A          149 -----LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK  223 (327)
T ss_dssp             -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHH
Confidence                 122357999999999999988875   5899999999999876422110000          0000000000000


Q ss_pred             eEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecC
Q 019060          232 LTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN  270 (346)
Q Consensus       232 ~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~  270 (346)
                      ..      ..+-.+.++|+|++++.++..+.....++.+
T Consensus       224 ~~------~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg  256 (327)
T 1jtv_A          224 QV------FREAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (327)
T ss_dssp             HH------HHHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             Hh------hhhcCCCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            00      0011257899999999999876544444444

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.74  E-value=2.3e-16  Score=138.14  Aligned_cols=214  Identities=12%  Similarity=0.032  Sum_probs=139.3

Q ss_pred             CCCEEEEEcCc--hhHHHHHHHHHHhcCCCeEEEEeCCC----------CCCcchhhhhcCC---CCeeEEecc------
Q 019060           31 SNMRILVTGGA--GFIGSHLVDKLMENEKNEVIVVDNYF----------TGSKDNLRKWIGH---PRFELIRHD------   89 (346)
Q Consensus        31 ~~~~ilItG~t--G~iG~~l~~~L~~~g~~~V~~~~r~~----------~~~~~~~~~~~~~---~~~~~~~~d------   89 (346)
                      .+|++|||||+  |+||++++++|+++| ++|++++|+.          ....+...+....   .....+.+|      
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAG-AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCC-CeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccch
Confidence            46899999999  999999999999999 9999987531          0011111111000   001222322      


Q ss_pred             ------cCC--------ccc------------CCCCEEEEcccCCC--cc----ccccChHHHHHHHHHHHHHHHHHHHH
Q 019060           90 ------VTE--------PLL------------IEVDQIYHLACPAS--PI----FYKYNPVKTIKTNVIGTLNMLGLAKR  137 (346)
Q Consensus        90 ------~~~--------~~~------------~~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~  137 (346)
                            +++        .+.            .++|++||+||...  ..    ...+++...+++|+.++..+++++..
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  165 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence                  221        211            15999999998532  11    12345678899999999999999875


Q ss_pred             c---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCC
Q 019060          138 V---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGP  209 (346)
Q Consensus       138 ~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~  209 (346)
                      .   +.++|++||...+..                .... ..|+.+|...+.+.+.++.+    .++++++++||.+.++
T Consensus       166 ~m~~~g~iv~isS~~~~~~----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~  229 (297)
T 1d7o_A          166 IMNPGGASISLTYIASERI----------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSR  229 (297)
T ss_dssp             GEEEEEEEEEEECGGGTSC----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCC
T ss_pred             HhccCceEEEEeccccccC----------------CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccc
Confidence            4   248999999876431                1111 36999999999999887755    5899999999999988


Q ss_pred             CCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .....  .....+........++         ..+..++|+|++++.++....    +..+++.++.
T Consensus       230 ~~~~~--~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          230 AAKAI--GFIDTMIEYSYNNAPI---------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             CSSCC--SHHHHHHHHHHHHSSS---------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhhhc--cccHHHHHHhhccCCC---------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            64321  1223332222222111         135688999999999886432    4467777764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.74  E-value=9.5e-17  Score=149.29  Aligned_cols=215  Identities=15%  Similarity=0.174  Sum_probs=147.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCc--chhhh-hcC-CCCeeEEecccCCcccC--------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK--DNLRK-WIG-HPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~--~~~~~-~~~-~~~~~~~~~d~~~~~~~--------   96 (346)
                      ..+++||||||+|+||.+++++|+++| + .|++++|+.....  ..+.. +.. ..++.++.+|++|.+..        
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G-~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRG-APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHT-CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC-CCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999 7 4888998653211  11111 111 23678899999986432        


Q ss_pred             ---CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccc-cCCCCCCCCCCCCcCCC
Q 019060           97 ---EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEV-YGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~~  167 (346)
                         .+|+|||+||......    ..++....+.+|+.++.++.+++...+. +||++||... +|.              
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~--------------  368 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA--------------  368 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC--------------
T ss_pred             hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC--------------
Confidence               4699999999765322    2344567778999999999999998776 8999999764 432              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                         .....|+.+|...+.+...+.. .++++++++||.+++++..       .....     ..+   .  ...+.+++.
T Consensus       369 ---~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~-------~~~~~-----~~~---~--~~g~~~i~~  427 (486)
T 2fr1_A          369 ---PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMA-------EGPVA-----DRF---R--RHGVIEMPP  427 (486)
T ss_dssp             ---TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC------------------------C---T--TTTEECBCH
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCccc-------chhHH-----HHH---H--hcCCCCCCH
Confidence               1225699999999998876654 5899999999998875311       00000     000   0  122468999


Q ss_pred             HHHHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHH
Q 019060          248 SDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVK  284 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~  284 (346)
                      +|+++++..++..+..... +.   .+.|..+...+.
T Consensus       428 e~~a~~l~~~l~~~~~~~~-v~---~~d~~~~~~~~~  460 (486)
T 2fr1_A          428 ETACRALQNALDRAEVCPI-VI---DVRWDRFLLAYT  460 (486)
T ss_dssp             HHHHHHHHHHHHTTCSSCE-EC---EECHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCeEE-EE---eCCHHHHhhhhc
Confidence            9999999999986654332 22   256777665443

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.74  E-value=2e-16  Score=135.31  Aligned_cols=212  Identities=13%  Similarity=0.026  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~---------   96 (346)
                      .+|++|||||+|  .||+.+++.|.++| ++|++.+|+..... ...+.   ....++.++.+|+++.+..         
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~G-a~Vvi~~r~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLG-AKLVFTYRKERSRK-ELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTT-CEEEEEESSGGGHH-HHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            478999999887  89999999999999 99999999643222 22222   2334688999999997543         


Q ss_pred             ---CCCEEEEcccCCCccc-----cc---cChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASPIF-----YK---YNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~-----~~---~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                         ++|++||+||......     .+   +++...+++|+.+...+..++...-   .++|++||....-          
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~----------  152 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF----------  152 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS----------
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc----------
Confidence               6999999999654321     11   2334566788888888777765432   3899999987542          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+......  ......+.....-++.      
T Consensus       153 ------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~Pl~------  218 (256)
T 4fs3_A          153 ------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG--GFNTILKEIKERAPLK------  218 (256)
T ss_dssp             ------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--THHHHHHHHHHHSTTS------
T ss_pred             ------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc--CCHHHHHHHHhcCCCC------
Confidence                  22233579999999999999888764   789999999998765432211  1233333333332221      


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                         .+...+|+|++++.++....    +..+.+.+|
T Consensus       219 ---R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          219 ---RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             ---SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence               25578999999999886543    445666654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.74  E-value=4e-17  Score=140.14  Aligned_cols=205  Identities=12%  Similarity=0.000  Sum_probs=133.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc-------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-------------I   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-------------~   96 (346)
                      .++++|||||+|+||++++++|+++| +.|++++|+............. ..++.++.+|+++.+.             .
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAG-ATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999 9999999854221111111111 2357889999998632             3


Q ss_pred             CCCEEEEcccC--C-------Cc--cccccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCC
Q 019060           97 EVDQIYHLACP--A-------SP--IFYKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQD  160 (346)
Q Consensus        97 ~~d~vi~~a~~--~-------~~--~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~  160 (346)
                      ++|++||+||.  .       .+  ....++....+++|+.++..+.+++    ++.+ .++|++||...+..       
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------  155 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY-------  155 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence            58999999942  1       11  1122345677788888887666554    3444 49999999877531       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                                .+...|+.+|...+.+.+.++.+   .++++++++||.+..+....    .....  .............
T Consensus       156 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~----~~~~~--~~~~~~~~~~~~~  219 (260)
T 2qq5_A          156 ----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE----HMAKE--EVLQDPVLKQFKS  219 (260)
T ss_dssp             ----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------
T ss_pred             ----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH----hhccc--cccchhHHHHHHh
Confidence                      12357999999999999988765   47999999999998774211    00000  0000000000000


Q ss_pred             CcceeecccHHHHHHHHHHHHhCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                        ....+...+|+|++++.++..+
T Consensus       220 --~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          220 --AFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTCT
T ss_pred             --hhccCCCHHHHHHHHHHHhcCc
Confidence              0112467899999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.73  E-value=6.3e-17  Score=142.72  Aligned_cols=199  Identities=15%  Similarity=0.046  Sum_probs=135.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC-----CCcchhh---hhcCCCCeeEEecccCCccc-------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-----GSKDNLR---KWIGHPRFELIRHDVTEPLL-------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~-----~~~~~~~---~~~~~~~~~~~~~d~~~~~~-------   95 (346)
                      .+|++|||||+|+||++++++|+++| +.|++++|...     ...+...   ..+..... ...+|+.+...       
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~G-a~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHHH
Confidence            46899999999999999999999999 99999865321     0111111   11111111 23467777642       


Q ss_pred             -----CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccc-cCCCCCCCCC
Q 019060           96 -----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEV-YGDPLVHPQD  160 (346)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v-~~~~~~~~~~  160 (346)
                           .++|+|||+||......    ..++++..+++|+.++..+++++    ++.+. ++|++||... ++.       
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~-------  158 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN-------  158 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-------
Confidence                 26999999999765321    23456788999999998888876    44454 9999999754 432       


Q ss_pred             CCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecC
Q 019060          161 ESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       161 e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                                .+...|+.+|...+.+.+.++.+   .++++++++||.+ .+..    ...++                 
T Consensus       159 ----------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~----~~~~~-----------------  206 (319)
T 1gz6_A          159 ----------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT----ETVMP-----------------  206 (319)
T ss_dssp             ----------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT----GGGSC-----------------
T ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc----cccCC-----------------
Confidence                      12357999999999999988876   4789999999986 3211    10000                 


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC---CCcEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~  271 (346)
                       .....++.++|+|.+++.++..+.   ++.|++.++
T Consensus       207 -~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          207 -EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             -HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             -hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence             011235688999999999887543   345666664

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.73  E-value=3.3e-16  Score=133.56  Aligned_cols=204  Identities=14%  Similarity=0.113  Sum_probs=141.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||+++++.|.++| ++|++.+|+..+..         ....++.+|+++.+..            ++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   79 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELG-AQVLTTARARPEGL---------PEELFVEADLTTKEGCAIVAEATRQRLGGV   79 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTT-CEEEEEESSCCTTS---------CTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcC-CEEEEEECCchhCC---------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999 99999999643211         2234688999987432            59


Q ss_pred             CEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |++|||||.....      ...+++...+++|+.++..+.+++    ++.+. ++|++||....-.              
T Consensus        80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~--------------  145 (261)
T 4h15_A           80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP--------------  145 (261)
T ss_dssp             SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC--------------
T ss_pred             CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC--------------
Confidence            9999999864321      123567788999999988887755    34444 8999999875421              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHH--------------HHHHHHHcCC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVS--------------NFIAQAIRGE  230 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~--------------~~~~~~~~~~  230 (346)
                       .+.....|+.+|...+.+.+.++.+   .++++..|.||.+-.+..    .....              .........-
T Consensus       146 -~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (261)
T 4h15_A          146 -LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEAS----VRLAERLAKQAGTDLEGGKKIIMDGLGGI  220 (261)
T ss_dssp             -CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHH----HHHHHHHHHHTTCCHHHHHHHHHHHTTCC
T ss_pred             -CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcch----hhhhHHHHHhhccchhhHHHHHHHHhcCC
Confidence             1112356999999999999988876   478999999998865421    00111              1111111111


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++         ..+...+|+|++++.++....    +..+.+.+|-
T Consensus       221 Pl---------gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          221 PL---------GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             TT---------SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CC---------CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            11         236678999999999886543    4467776653

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.71  E-value=7.7e-16  Score=143.72  Aligned_cols=216  Identities=16%  Similarity=0.149  Sum_probs=150.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCc--chh-hhhcC-CCCeeEEecccCCcccC-------C
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK--DNL-RKWIG-HPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~--~~~-~~~~~-~~~~~~~~~d~~~~~~~-------~   97 (346)
                      ..+++||||||+|+||.+++++|.++| + .|++++|+.....  ..+ .++.. ..++.++.+|++|.+.+       .
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G-~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEG-AERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTT-CSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCC-CcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            347899999999999999999999999 7 6888888643211  111 11111 23588899999997543       4


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEecccc-cCCCCCCCCCCCCcCCCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV-GA-RILLTSTSEV-YGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-r~i~~SS~~v-~~~~~~~~~~e~~~~~~~~~  170 (346)
                      +|+|||+||......    ..+.....+.+|+.++.++.+++... +. +||++||... +|.                 
T Consensus       336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~-----------------  398 (511)
T 2z5l_A          336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN-----------------  398 (511)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-----------------
T ss_pred             CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-----------------
Confidence            999999999765432    22345677889999999999998876 55 8999999754 432                 


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      .....|+.+|...|.+.+.+. ..++++++++||.+-+.+..   .......+   .           ...+.+++.+|+
T Consensus       399 ~g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~---~~~~~~~~---~-----------~~g~~~l~~e~~  460 (511)
T 2z5l_A          399 AGQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMA---AGAGEESL---S-----------RRGLRAMDPDAA  460 (511)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCC---CCHHHHHH---H-----------HHTBCCBCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccc---ccccHHHH---H-----------hcCCCCCCHHHH
Confidence            123579999999999988764 45899999999887433211   11111111   1           111357899999


Q ss_pred             HHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHH
Q 019060          251 VDGLIRLMEGENTGPINIGNPGEFTMLELAENVKE  285 (346)
Q Consensus       251 a~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~  285 (346)
                      ++++..++..+...+ .+.   .+.|..+...+..
T Consensus       461 a~~l~~al~~~~~~v-~v~---~~d~~~~~~~~~~  491 (511)
T 2z5l_A          461 VDALLGAMGRNDVCV-TVV---DVDWERFAPATNA  491 (511)
T ss_dssp             HHHHHHHHHHTCSEE-EEC---CBCHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCEE-EEE---eCCHHHHHhhhcc
Confidence            999999998665432 222   2567777666544

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.64  E-value=9.3e-15  Score=128.90  Aligned_cols=216  Identities=12%  Similarity=0.047  Sum_probs=134.5

Q ss_pred             CCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCCC----------CCcchhhhhcCCC---CeeEEecc------
Q 019060           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYFT----------GSKDNLRKWIGHP---RFELIRHD------   89 (346)
Q Consensus        31 ~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~~----------~~~~~~~~~~~~~---~~~~~~~d------   89 (346)
                      .++++|||||  +|+||++++++|+++| +.|++++|+..          ...+...+.....   ...++.+|      
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~   86 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAG-ARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKP   86 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTT-CEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSST
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCC-CEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccccc
Confidence            4679999999  8999999999999999 99999886320          0001111110000   02333333      


Q ss_pred             ------cCC--------ccc------------CCCCEEEEcccCCC--cc----ccccChHHHHHHHHHHHHHHHHHHHH
Q 019060           90 ------VTE--------PLL------------IEVDQIYHLACPAS--PI----FYKYNPVKTIKTNVIGTLNMLGLAKR  137 (346)
Q Consensus        90 ------~~~--------~~~------------~~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~  137 (346)
                            +++        .+.            .++|++||+||...  ..    ...+++...+++|+.++..+++++..
T Consensus        87 ~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           87 EDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             TSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHST
T ss_pred             chhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence                  332        111            15999999998642  11    12345678899999999999999865


Q ss_pred             c---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCC
Q 019060          138 V---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGP  209 (346)
Q Consensus       138 ~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~  209 (346)
                      .   +.++|++||...+..                .... ..|+.+|...+.+.+.++.+    .++++.+++||.+..+
T Consensus       167 ~m~~~g~Iv~isS~~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  230 (315)
T 2o2s_A          167 IMNEGGSAVTLSYLAAERV----------------VPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR  230 (315)
T ss_dssp             TEEEEEEEEEEEEGGGTSC----------------CTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred             HHhcCCEEEEEeccccccc----------------CCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence            3   248999999876531                1111 36999999999999887655    4799999999988654


Q ss_pred             CCCC----CCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          210 RMNI----DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       210 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                      ....    ....+...+........++         ..+..++|+|++++.++....   .| .+.+.+|.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          231 AASAIGKSGEKSFIDYAIDYSYNNAPL---------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHHTTCSSSSCHHHHHHHHHHHHSSS---------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhhhccccccchhHHHHHHHHhccCCC---------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            2100    0001111111111111111         135688999999999887432   34 56666653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.64  E-value=3.7e-15  Score=138.14  Aligned_cols=198  Identities=15%  Similarity=0.154  Sum_probs=138.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCC--cchhhhhcC--CCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGS--KDNLRKWIG--HPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~--~~~~~~~~~--~~~~~~~~~d~~~~~~~---------   96 (346)
                      +++++|||||+|+||.+++++|.++| + .|+++.|+....  ...+...+.  ..++.++.+|++|.+.+         
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~G-a~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~  316 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQG-AAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPE  316 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTT-CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCC-CcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999999 6 788888863221  111111111  23688999999986322         


Q ss_pred             --CCCEEEEcccCC-Cccc----cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 --EVDQIYHLACPA-SPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 --~~d~vi~~a~~~-~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                        .+|+|||+||.. ....    ..++....+++|+.++.++.+++...+. +||++||...+-.               
T Consensus       317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g---------------  381 (496)
T 3mje_A          317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWG---------------  381 (496)
T ss_dssp             TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTT---------------
T ss_pred             hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCC---------------
Confidence              589999999976 3221    2244677889999999999999988776 8999999765421               


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                       ......|+.+|...+.+.+.+. ..++++++|.||.+.+.+....     ......+...           ....+..+
T Consensus       382 -~~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~-----~~~~~~l~~~-----------g~~~l~pe  443 (496)
T 3mje_A          382 -SGGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATD-----PEVHDRLVRQ-----------GVLAMEPE  443 (496)
T ss_dssp             -CTTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-----------CHHHHHT-----------TEEEECHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccC-----hHHHHHHHhc-----------CCCCCCHH
Confidence             1223569999999999988765 4589999999998876653211     0111111111           12345778


Q ss_pred             HHHHHHHHHHhCCC
Q 019060          249 DMVDGLIRLMEGEN  262 (346)
Q Consensus       249 Dva~~i~~~~~~~~  262 (346)
                      +.++++..++..+.
T Consensus       444 ~~~~~l~~~l~~~~  457 (496)
T 3mje_A          444 HALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCC
Confidence            99999999988654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.63  E-value=3.5e-15  Score=131.87  Aligned_cols=221  Identities=11%  Similarity=-0.008  Sum_probs=119.6

Q ss_pred             CCCEEEEEcC--chhHHHHHHHHHHhcCCCeEEEEeCCC----------CCCcch-----------hhhhcCCC-----C
Q 019060           31 SNMRILVTGG--AGFIGSHLVDKLMENEKNEVIVVDNYF----------TGSKDN-----------LRKWIGHP-----R   82 (346)
Q Consensus        31 ~~~~ilItG~--tG~iG~~l~~~L~~~g~~~V~~~~r~~----------~~~~~~-----------~~~~~~~~-----~   82 (346)
                      .++++|||||  +|+||++++++|+++| +.|++++|+.          ......           ....+...     .
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAG-ARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTT-CEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCC-CEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            3578999999  8999999999999999 9999987631          000000           00000000     0


Q ss_pred             eeEEecc------------cCC--------ccc------------CCCCEEEEcccCCC--cc----ccccChHHHHHHH
Q 019060           83 FELIRHD------------VTE--------PLL------------IEVDQIYHLACPAS--PI----FYKYNPVKTIKTN  124 (346)
Q Consensus        83 ~~~~~~d------------~~~--------~~~------------~~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n  124 (346)
                      ..++.+|            +++        .+.            .++|++|||||...  ..    ...+++...+++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            2333333            222        111            15999999998542  11    1234567788999


Q ss_pred             HHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCC-CchHHhHHHHHHHHHHHHHH----hCC
Q 019060          125 VIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR-SCYDEGKRVAETLMFDYHRQ----HGI  196 (346)
Q Consensus       125 ~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~~  196 (346)
                      +.++..+++++...   +.++|++||...+..                .... ..|+.+|...+.+.+.++.+    .++
T Consensus       167 ~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----------------~~~~~~~Y~asKaal~~l~~~la~el~~~~gI  230 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKEGGSALALSYIASEKV----------------IPGYGGGMSSAKAALESDCRTLAFEAGRARAV  230 (319)
T ss_dssp             THHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHHHHHCC
T ss_pred             hHHHHHHHHHHHHHHhcCceEEEEeccccccc----------------cCccchhhHHHHHHHHHHHHHHHHHhccccCe
Confidence            99999999988754   248999999875421                1111 36999999999998887655    489


Q ss_pred             ceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          197 EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       197 ~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++.+|+||.+..+............+......  .+   ........+..++|+|++++.++....    +..+.+.+|.
T Consensus       231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~---~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAID--YS---EANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             EEEEEEECCCC------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             eEEEEeeCCccChhhhhcccccchhhHHHHHH--HH---hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            99999999988763210000000000000000  00   000011246789999999999887532    3466666664


Q ss_pred             C
Q 019060          273 E  273 (346)
Q Consensus       273 ~  273 (346)
                      .
T Consensus       306 ~  306 (319)
T 2ptg_A          306 H  306 (319)
T ss_dssp             T
T ss_pred             e
Confidence            3

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.61  E-value=2.5e-15  Score=143.72  Aligned_cols=200  Identities=14%  Similarity=-0.044  Sum_probs=127.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC--------CCCcchhhhhcCCCCeeEEecccCCccc-------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF--------TGSKDNLRKWIGHPRFELIRHDVTEPLL-------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------   95 (346)
                      .++++|||||+|.||++++++|+++| +.|++++|..        ....+.....+..... .+.+|+.+...       
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~G-a~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERG-AKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHHHH
Confidence            47899999999999999999999999 9999988721        1111111111111111 12367766532       


Q ss_pred             -----CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCC
Q 019060           96 -----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e  161 (346)
                           .++|++|||||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+.         
T Consensus        96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~---------  166 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY---------  166 (613)
T ss_dssp             ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH---------
T ss_pred             HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC---------
Confidence                 15999999999765422    33567788999999999998887    44444 999999976542         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                             +......|+.+|...+.+.+.++.+.   ++++..+.|+.+- +.                ..+. .     .
T Consensus       167 -------~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~----------------~~~~-~-----~  216 (613)
T 3oml_A          167 -------GNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RM----------------TEGI-L-----P  216 (613)
T ss_dssp             -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------CCC-C-----C
T ss_pred             -------CCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hh----------------hhhc-c-----c
Confidence                   11223569999999999999888764   7889999997531 11                0000 0     0


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---CCcEEecCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~  271 (346)
                      ......+..+|+|.+++.++....   +..+++.+|
T Consensus       217 ~~~~~~~~pedvA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          217 DILFNELKPKLIAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             HHHHTTCCGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             hhhhhcCCHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence            112234578999999999886543   335555543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.60  E-value=4e-14  Score=125.57  Aligned_cols=161  Identities=8%  Similarity=-0.029  Sum_probs=113.6

Q ss_pred             CCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCC---------C--CCcchhhhh--cCCCCeeEEecccCCc--c
Q 019060           32 NMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYF---------T--GSKDNLRKW--IGHPRFELIRHDVTEP--L   94 (346)
Q Consensus        32 ~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~---------~--~~~~~~~~~--~~~~~~~~~~~d~~~~--~   94 (346)
                      ++++|||||++  .||.+++++|+++| +.|++.+|..         .  .........  .....+.++.+|+.+.  +
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G-~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRN-VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCC-CEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            57899999875  99999999999999 9999776532         0  000000000  0112367788888766  3


Q ss_pred             ------------------cC------------CCCEEEEcccCCC--cc----ccccChHHHHHHHHHHHHHHHHHHHHc
Q 019060           95 ------------------LI------------EVDQIYHLACPAS--PI----FYKYNPVKTIKTNVIGTLNMLGLAKRV  138 (346)
Q Consensus        95 ------------------~~------------~~d~vi~~a~~~~--~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~  138 (346)
                                        ..            ++|++|||||...  ..    ...++....+++|+.++..+.+++...
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              22            5999999998632  11    123456788999999999999987653


Q ss_pred             C---CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC-chHHhHHHHHHHHHHHHHH----hCCceEEEEeccccCC
Q 019060          139 G---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS-CYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTYGP  209 (346)
Q Consensus       139 ~---~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~G~  209 (346)
                      =   .++|++||...+.                +..... .|+.+|...+.+.+.++.+    .++++..+.||.+..+
T Consensus       161 m~~~g~Iv~isS~~~~~----------------~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~  223 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQK----------------VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR  223 (329)
T ss_dssp             EEEEEEEEEEECGGGTS----------------CCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred             HhhCCeEEEEeCccccC----------------CCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence            1   3899999987642                111222 6999999999988877654    4899999999988654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.58  E-value=2.9e-14  Score=133.62  Aligned_cols=216  Identities=12%  Similarity=0.077  Sum_probs=144.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCe-EEEE-eCCCCC-------------CcchhhhhcC-CCCeeEEecccCCc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVV-DNYFTG-------------SKDNLRKWIG-HPRFELIRHDVTEP   93 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~-~r~~~~-------------~~~~~~~~~~-~~~~~~~~~d~~~~   93 (346)
                      ..++++|||||+|.||.+++++|.++| .. |+++ +|+...             ..+...++.. ...+.++.+|++|.
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G-~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDG-AGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHT-CCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcC-CCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            357899999999999999999999999 66 5666 776321             1111111111 23688999999996


Q ss_pred             cc-----------CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcC-----C-eEEEEecccccC
Q 019060           94 LL-----------IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG-----A-RILLTSTSEVYG  152 (346)
Q Consensus        94 ~~-----------~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~-r~i~~SS~~v~~  152 (346)
                      +.           ..+|+|||+||......    ..++....+++|+.++.++.+++....     . +||++||...+-
T Consensus       328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            43           25899999999765432    234567788999999999999987765     4 899999987542


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe
Q 019060          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
                      .                ......|+.+|...+.+..++.. .+++++++.||.+-.+. .  ........+   ...   
T Consensus       408 g----------------~~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~tgm-~--~~~~~~~~~---~~~---  461 (525)
T 3qp9_A          408 G----------------GAGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEGSR-V--TEGATGERL---RRL---  461 (525)
T ss_dssp             C----------------CTTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTTSG-G--GSSHHHHHH---HHT---
T ss_pred             C----------------CCCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcccccc-c--cchhhHHHH---Hhc---
Confidence            1                12235699999999998765543 48999999999883221 1  011111111   111   


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHH
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVK  284 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~  284 (346)
                              ....+..+++++++..++..+...+. +.   .+.|..+...+.
T Consensus       462 --------g~~~l~pee~a~~l~~~l~~~~~~v~-v~---~~dw~~~~~~~~  501 (525)
T 3qp9_A          462 --------GLRPLAPATALTALDTALGHGDTAVT-IA---DVDWSSFAPGFT  501 (525)
T ss_dssp             --------TBCCBCHHHHHHHHHHHHHHTCSEEE-EC---CBCHHHHHHHHH
T ss_pred             --------CCCCCCHHHHHHHHHHHHhCCCCeEE-EE---eCCHHHHHhhcc
Confidence                    12356889999999999986654332 22   245666655544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.46  E-value=2.6e-12  Score=122.42  Aligned_cols=199  Identities=16%  Similarity=0.092  Sum_probs=132.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEeccc-CCcc---------cCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDV-TEPL---------LIEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~-~~~~---------~~~~d   99 (346)
                      .++.++||||++.||+.+++.|.++| +.|++.+|..  ..+...+... ...+..+.+|+ .+..         .-++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~G-a~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD  397 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYG-AKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTID  397 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCC-CEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence            46789999999999999999999999 9999887632  1111112111 12455677888 4432         12699


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      ++|||||......    ..++++..+++|+.++..+.+++.    +.+ .++|++||...+-                +.
T Consensus       398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~----------------~~  461 (604)
T 2et6_A          398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIY----------------GN  461 (604)
T ss_dssp             EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS----------------CC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc----------------CC
Confidence            9999999754322    234577889999999998887653    334 3899999976542                11


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|.....+.+.++.+.   ++++..|.|+. -.+.        .......              ........
T Consensus       462 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m--------~~~~~~~--------------~~~~~~~p  518 (604)
T 2et6_A          462 FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAM--------TLSIMRE--------------QDKNLYHA  518 (604)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-------------------------------CCSSCG
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcc--------ccccCch--------------hhccCCCH
Confidence            123569999999999999887763   78999999973 2111        0100000              00124578


Q ss_pred             HHHHHHHHHHHhCCC---CCcEEecCC
Q 019060          248 SDMVDGLIRLMEGEN---TGPINIGNP  271 (346)
Q Consensus       248 ~Dva~~i~~~~~~~~---~~~~~~~~~  271 (346)
                      +|+|.+++.++....   ++.+.+.+|
T Consensus       519 e~vA~~v~~L~s~~~~itG~~~~vdGG  545 (604)
T 2et6_A          519 DQVAPLLVYLGTDDVPVTGETFEIGGG  545 (604)
T ss_dssp             GGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHhCCccCCCCcEEEECCC
Confidence            999999998886432   345555554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.42  E-value=3.9e-12  Score=121.26  Aligned_cols=217  Identities=15%  Similarity=0.066  Sum_probs=140.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC--------CCcchhhhhcCCCCeeEEecccCCccc-------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--------GSKDNLRKWIGHPRFELIRHDVTEPLL-------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~d~~~~~~-------   95 (346)
                      .++.++||||++.||+++++.|.++| +.|++.+|...        ...+.....+...+.+. .+|+.+...       
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~G-a~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLG-AKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcC-CEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence            46789999999999999999999999 99999877531        11111111111111121 245555422       


Q ss_pred             -----CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCC
Q 019060           96 -----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        96 -----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e  161 (346)
                           .++|++|||||......    ..++++..+++|+.++..+.+++    ++.+ .++|++||....-         
T Consensus        85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~---------  155 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY---------  155 (604)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC---------
Confidence                 25999999999754322    33457789999999998887765    3344 3999999976531         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                             +......|+.+|...+.+.+.++.+.   ++++..|.|+ +.        +.+    ....   ..       
T Consensus       156 -------~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~--------T~m----~~~~---~~-------  205 (604)
T 2et6_A          156 -------GNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR--------SRM----TESI---MP-------  205 (604)
T ss_dssp             -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC--------CHH----HHTT---SC-------
T ss_pred             -------CCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc--------Ccc----cccc---CC-------
Confidence                   11122469999999999999887763   7889999995 21        111    1100   00       


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC---CCcEEecCC------------------CCCCHHHHHHHHHHHcC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP------------------GEFTMLELAENVKELIN  288 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~------------------~~~s~~ei~~~i~~~~g  288 (346)
                      .........+|+|.+++.++....   ++.+.+.+|                  ..++..++.+.+.++..
T Consensus       206 ~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  276 (604)
T 2et6_A          206 PPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD  276 (604)
T ss_dssp             HHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred             hhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence            011123578999999999886543   334444332                  44688899888887654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.37  E-value=1.2e-12  Score=131.39  Aligned_cols=197  Identities=18%  Similarity=0.144  Sum_probs=128.3

Q ss_pred             CCCEEEEEcCchh-HHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcC-----CCCeeEEecccCCccc--------
Q 019060           31 SNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLL--------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~-iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~--------   95 (346)
                      .++++|||||+|. ||+++++.|++.| +.|+++ .|+.....+...+...     ...+.++.+|+++.+.        
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~G-A~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGG-AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHT-CEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCc-CEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            3578999999998 9999999999999 999888 4543322222222211     2357889999998631        


Q ss_pred             --------C--CCCEEEEcccCCCcc-cc------ccChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEeccccc
Q 019060           96 --------I--EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKRV------G-ARILLTSTSEVY  151 (346)
Q Consensus        96 --------~--~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~~------~-~r~i~~SS~~v~  151 (346)
                              .  ++|+|||+||..... ..      .++....+++|+.++..++++++..      + .+||++||....
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~  633 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  633 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence                    1  489999999976433 11      2345778899999999998887321      2 279999997643


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH-HHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHc
Q 019060          152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL-MFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR  228 (346)
Q Consensus       152 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~  228 (346)
                      ..                  ....|+.+|...+.+ .+.++++..  ++++.+.||.+.+...... ..    .......
T Consensus       634 ~G------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~-~e----~~~~~l~  690 (1688)
T 2pff_A          634 FG------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NN----IIAEGIE  690 (1688)
T ss_dssp             SS------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-TT----TCSTTTS
T ss_pred             cC------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-ch----HHHHHHH
Confidence            11                  124699999999998 343333222  6778888888875321100 00    0000000


Q ss_pred             CCCeEEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       229 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                      .          ....+...+|+|++++.++...
T Consensus       691 ~----------iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          691 K----------MGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             S----------SSCCCCCCCTTHHHHHHHTSTT
T ss_pred             h----------CCCCCCCHHHHHHHHHHHhCCC
Confidence            0          0112447899999999988765

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.37  E-value=1.4e-11  Score=109.49  Aligned_cols=165  Identities=13%  Similarity=0.028  Sum_probs=115.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHh-cCCCeEEEEeCCCCCCcch-----------hhhhc--CCCCeeEEecccCCccc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDN-----------LRKWI--GHPRFELIRHDVTEPLL   95 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~-----------~~~~~--~~~~~~~~~~d~~~~~~   95 (346)
                      ..++++|||||++.||+++++.|.+ .| ..|++++|........           ..+..  ....+..+.+|+++.+.
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~G-A~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCG-ADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcC-CEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            3468999999999999999999999 99 9999988865332211           11111  12357789999998743


Q ss_pred             C------------CCCEEEEcccCCC---------------cc-----------------------ccccChHHHHHHHH
Q 019060           96 I------------EVDQIYHLACPAS---------------PI-----------------------FYKYNPVKTIKTNV  125 (346)
Q Consensus        96 ~------------~~d~vi~~a~~~~---------------~~-----------------------~~~~~~~~~~~~n~  125 (346)
                      .            ++|++||+||...               +.                       ...++++..+++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            2            5999999998641               10                       12234566777787


Q ss_pred             HHHH-HHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh----C
Q 019060          126 IGTL-NMLGLAKRV-----GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH----G  195 (346)
Q Consensus       126 ~~~~-~l~~~~~~~-----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~  195 (346)
                      .+.. .+++++...     +.++|.+||....-.              .+......|+.+|...+.+.+.++.+.    +
T Consensus       204 ~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~--------------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~G  269 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKIT--------------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGG  269 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             hhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCcccC
Confidence            7665 455554322     348999999764311              122223579999999999999887763    7


Q ss_pred             CceEEEEeccccCC
Q 019060          196 IEIRIARIFNTYGP  209 (346)
Q Consensus       196 ~~~~ivR~~~i~G~  209 (346)
                      +++.++.||.+--+
T Consensus       270 IRVNaVaPG~i~T~  283 (405)
T 3zu3_A          270 GDARVSVLKAVVSQ  283 (405)
T ss_dssp             CEEEEEECCCCCCH
T ss_pred             eEEEEEEeCCCcCc
Confidence            89999999988654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.36  E-value=3.1e-11  Score=124.70  Aligned_cols=218  Identities=18%  Similarity=0.150  Sum_probs=139.4

Q ss_pred             CCCEEEEEcCchh-HHHHHHHHHHhcCCCeEEEEeCCCCCCc-ch---hhhhcC--CCCeeEEecccCCcc---------
Q 019060           31 SNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVDNYFTGSK-DN---LRKWIG--HPRFELIRHDVTEPL---------   94 (346)
Q Consensus        31 ~~~~ilItG~tG~-iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~---~~~~~~--~~~~~~~~~d~~~~~---------   94 (346)
                      .++++|||||+|. ||.++++.|++.| +.|+++++...... +.   +...+.  ...+.++.+|+++..         
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~G-A~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGG-AKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4589999999999 9999999999999 89988854322111 11   111111  235788999999852         


Q ss_pred             ------cC-CCCEEEEcccCCCcc-cc------ccChHHHHHHHHHHHHHHHHHHHHc------C-CeEEEEecccccCC
Q 019060           95 ------LI-EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKRV------G-ARILLTSTSEVYGD  153 (346)
Q Consensus        95 ------~~-~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~~------~-~r~i~~SS~~v~~~  153 (346)
                            .. .+|+||||||..... ..      .++....+++|+.++..++++++..      + .+||++||...+-.
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g  809 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG  809 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC
Confidence                  12 589999999976432 11      2345788899999999887763211      2 27999999764321


Q ss_pred             CCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH-h--CCceEEEEecccc-CCCCCCCCccHHHHHHHHHHcC
Q 019060          154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-H--GIEIRIARIFNTY-GPRMNIDDGRVVSNFIAQAIRG  229 (346)
Q Consensus       154 ~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~ivR~~~i~-G~~~~~~~~~~~~~~~~~~~~~  229 (346)
                                        ....|+.+|...+.+.+.+..+ .  .++++.+.||.+- .+..    ..  ..........
T Consensus       810 ------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~----~~--~~~~~~~~~~  865 (1878)
T 2uv9_A          810 ------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLM----SA--NNLVAEGVEK  865 (1878)
T ss_dssp             ------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSC----SH--HHHTHHHHHT
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccc----cc--chhhHHHHHh
Confidence                              1246999999999987765443 1  2788999999887 4321    11  1111111211


Q ss_pred             CCeEEecCCcceeecccHHHHHHHHHHHHhCCC-----CCcEEe--cCCC--CCCHHHHHHHH
Q 019060          230 EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-----TGPINI--GNPG--EFTMLELAENV  283 (346)
Q Consensus       230 ~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-----~~~~~~--~~~~--~~s~~ei~~~i  283 (346)
                      ..+          .+...+|+|++++.++....     +..+.+  .+|.  ...+.++...+
T Consensus       866 ~pl----------r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l  918 (1878)
T 2uv9_A          866 LGV----------RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL  918 (1878)
T ss_dssp             TTC----------CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred             cCC----------CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence            111          23478999999998886432     345555  2442  23555555433

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.29  E-value=4.3e-11  Score=123.95  Aligned_cols=218  Identities=17%  Similarity=0.136  Sum_probs=139.6

Q ss_pred             CCCEEEEEcCchh-HHHHHHHHHHhcCCCeEEEEe-CCCCCCcchhhhh---cC--CCCeeEEecccCCccc--------
Q 019060           31 SNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVD-NYFTGSKDNLRKW---IG--HPRFELIRHDVTEPLL--------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~-iG~~l~~~L~~~g~~~V~~~~-r~~~~~~~~~~~~---~~--~~~~~~~~~d~~~~~~--------   95 (346)
                      .++++|||||+|. ||.++++.|++.| +.|++++ |+.....+.....   ..  ...+.++.+|+++...        
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~G-A~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGG-AKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCC-CEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4678999999999 9999999999999 9998884 5322111111111   11  2357889999998521        


Q ss_pred             --------C--CCCEEEEcccCCCcc-cc------ccChHHHHHHHHHHHHHHHHHHHHcC-------CeEEEEeccccc
Q 019060           96 --------I--EVDQIYHLACPASPI-FY------KYNPVKTIKTNVIGTLNMLGLAKRVG-------ARILLTSTSEVY  151 (346)
Q Consensus        96 --------~--~~d~vi~~a~~~~~~-~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-------~r~i~~SS~~v~  151 (346)
                              .  ++|++|||||..... ..      .++....+++|+.++..++++++...       .+||++||...+
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~  832 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT  832 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence                    1  489999999976433 21      23457889999999999998874321       279999997643


Q ss_pred             CCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH-HHHHHHHhC--CceEEEEeccccCCCCCCCCccHHHHHHHHHHc
Q 019060          152 GDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL-MFDYHRQHG--IEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIR  228 (346)
Q Consensus       152 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~  228 (346)
                      ..                  ....|+.+|...+.+ .+.++.+..  ++++.+.||.+.+...... .......    ..
T Consensus       833 ~g------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~-~~~~~~~----~~  889 (1887)
T 2uv8_A          833 FG------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NNIIAEG----IE  889 (1887)
T ss_dssp             SS------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC------CCTTHHH----HH
T ss_pred             cC------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc-chhHHHH----HH
Confidence            21                  124699999999998 555554433  7899999999985321000 0111111    11


Q ss_pred             CCCeEEecCCcceeecccHHHHHHHHHHHHhCC-C----CCcEEec--CCCC--CCHHHHHHH
Q 019060          229 GEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE-N----TGPINIG--NPGE--FTMLELAEN  282 (346)
Q Consensus       229 ~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~-~----~~~~~~~--~~~~--~s~~ei~~~  282 (346)
                      ..+          ..+...+|+|++++.++... .    +..+.+.  +|..  ..+.++...
T Consensus       890 ~~p----------lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~  942 (1887)
T 2uv8_A          890 KMG----------VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAK  942 (1887)
T ss_dssp             TTS----------CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHH
T ss_pred             hcC----------CCCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHH
Confidence            111          12347899999999988755 1    3455552  4422  245555443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.28  E-value=6.9e-11  Score=106.86  Aligned_cols=165  Identities=10%  Similarity=-0.092  Sum_probs=111.8

Q ss_pred             CCCCEEEEEcCchhHHHH--HHHHHHhcCCCeEEEEeCCCCCCc-----------chhhhhc--CCCCeeEEecccCCcc
Q 019060           30 QSNMRILVTGGAGFIGSH--LVDKLMENEKNEVIVVDNYFTGSK-----------DNLRKWI--GHPRFELIRHDVTEPL   94 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~--l~~~L~~~g~~~V~~~~r~~~~~~-----------~~~~~~~--~~~~~~~~~~d~~~~~   94 (346)
                      ..++++|||||++.||.+  +++.|.+.| +.|++++|......           +.+.+..  ....+..+.+|+++.+
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~G-a~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~  136 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPE-AHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNE  136 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSC-CEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCC-CEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHH
Confidence            347899999999999999  999999999 99999988654321           2222211  1235788999999964


Q ss_pred             cC------------CCCEEEEcccCC-------------C--cc-----------------------ccccChHHHHHHH
Q 019060           95 LI------------EVDQIYHLACPA-------------S--PI-----------------------FYKYNPVKTIKTN  124 (346)
Q Consensus        95 ~~------------~~d~vi~~a~~~-------------~--~~-----------------------~~~~~~~~~~~~n  124 (346)
                      ..            ++|++||+||..             .  +.                       ...++....+++|
T Consensus       137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn  216 (418)
T 4eue_A          137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence            32            599999999863             1  00                       0122334455555


Q ss_pred             HHHHH-HHHHHHHHcC-----CeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH----h
Q 019060          125 VIGTL-NMLGLAKRVG-----ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----H  194 (346)
Q Consensus       125 ~~~~~-~l~~~~~~~~-----~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~  194 (346)
                      ..+.. .+++++....     .++|.+||....-.              .+......|+.+|...+.+.+.++.+    .
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~--------------~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~  282 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRT--------------YKIYREGTIGIAKKDLEDKAKLINEKLNRVI  282 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG--------------TTTTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCC--------------CCccccHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            55444 4455544332     37999998754210              12232367999999999988877654    5


Q ss_pred             CCceEEEEeccccCC
Q 019060          195 GIEIRIARIFNTYGP  209 (346)
Q Consensus       195 ~~~~~ivR~~~i~G~  209 (346)
                      ++++.++.||.|--+
T Consensus       283 GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          283 GGRAFVSVNKALVTK  297 (418)
T ss_dssp             SCEEEEEECCCCCCH
T ss_pred             CeEEEEEECCcCcCh
Confidence            789999999988754

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.27  E-value=5.7e-11  Score=106.59  Aligned_cols=165  Identities=15%  Similarity=0.003  Sum_probs=113.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHh-cCCCeEEEEeCCCCCCcch-----------hhhhc--CCCCeeEEecccCCcc--
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLME-NEKNEVIVVDNYFTGSKDN-----------LRKWI--GHPRFELIRHDVTEPL--   94 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~-~g~~~V~~~~r~~~~~~~~-----------~~~~~--~~~~~~~~~~d~~~~~--   94 (346)
                      .++++|||||++.||+++++.|.+ .| ..|++++|........           ..+..  ....+..+.+|+++.+  
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~G-A~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFG-ADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCC-CEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            478999999999999999999999 99 9999998865433221           11111  1235778999999863  


Q ss_pred             ----------c-CCCCEEEEcccCC-------------C--cc-----------------------ccccChHHHHHHHH
Q 019060           95 ----------L-IEVDQIYHLACPA-------------S--PI-----------------------FYKYNPVKTIKTNV  125 (346)
Q Consensus        95 ----------~-~~~d~vi~~a~~~-------------~--~~-----------------------~~~~~~~~~~~~n~  125 (346)
                                . -++|++|||||..             .  +.                       ...++++..+++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence                      2 3689999999862             1  10                       12233455666666


Q ss_pred             HHHH-HHHHHHHHc-----CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CC
Q 019060          126 IGTL-NMLGLAKRV-----GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GI  196 (346)
Q Consensus       126 ~~~~-~l~~~~~~~-----~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~  196 (346)
                      .+.. .+++++...     +.++|.+||....-.              .+......|+.+|...+.+.+.++.+.   ++
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~--------------~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GI  284 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEIT--------------WPIYWHGALGKAKVDLDRTAQRLNARLAKHGG  284 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG--------------HHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc--------------CCCccchHHHHHHHHHHHHHHHHHHHhCccCE
Confidence            5554 555555432     237999999764310              111112569999999999999887764   79


Q ss_pred             ceEEEEeccccCCC
Q 019060          197 EIRIARIFNTYGPR  210 (346)
Q Consensus       197 ~~~ivR~~~i~G~~  210 (346)
                      ++.++.||.|--+.
T Consensus       285 RVNaVaPG~i~T~~  298 (422)
T 3s8m_A          285 GANVAVLKSVVTQA  298 (422)
T ss_dssp             EEEEEEECCCCCTT
T ss_pred             EEEEEEcCCCcChh
Confidence            99999999988764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.26  E-value=1.1e-11  Score=121.62  Aligned_cols=198  Identities=16%  Similarity=0.164  Sum_probs=134.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHH-hcCCC-eEEEEeCCCCCCc---chhhhhcC-CCCeeEEecccCCcccC-------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLM-ENEKN-EVIVVDNYFTGSK---DNLRKWIG-HPRFELIRHDVTEPLLI-------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~-~~g~~-~V~~~~r~~~~~~---~~~~~~~~-~~~~~~~~~d~~~~~~~-------   96 (346)
                      .+++++|||||+|.||+.+++.|. ++| . .|++++|+.....   +...++.. ..++.++.+|+++.+..       
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~G-a~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERG-VRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSS-CCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcC-CcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            357899999999999999999999 789 6 5888888732221   11222211 23578899999986322       


Q ss_pred             ----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc-CCCCCCCCCCCCcCCC
Q 019060           97 ----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY-GDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~-~~~~~~~~~e~~~~~~  167 (346)
                          .+|+|||+||......    ..++....+++|+.++.++.+++.. ..+||++||...+ |.              
T Consensus       607 ~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l~iV~~SS~ag~~g~--------------  671 (795)
T 3slk_A          607 PDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DVALVLFSSVSGVLGS--------------  671 (795)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TSEEEEEEETHHHHTC--------------
T ss_pred             HHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CCEEEEEccHHhcCCC--------------
Confidence                5899999999765432    2345677888999999999998732 2289999998753 31              


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHH-HHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                         .....|+.+|...+.+.+++.. .+++++.+.||.+-.++.    ...+ ..........           ....+.
T Consensus       672 ---~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~----~~~~~~~~~~~~~~~-----------g~~~l~  732 (795)
T 3slk_A          672 ---GGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGM----ASTLREAEQDRLARS-----------GLLPIS  732 (795)
T ss_dssp             ---SSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCH----HHHHHHHHHHHHHHT-----------TBCCCC
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchh----hccccHHHHHHHHhc-----------CCCCCC
Confidence               2235699999988888777654 489999999988775531    1111 1111111111           123456


Q ss_pred             HHHHHHHHHHHHhCCC
Q 019060          247 VSDMVDGLIRLMEGEN  262 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~  262 (346)
                      .+++...+..++..+.
T Consensus       733 ~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          733 TEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHHHhCCC
Confidence            7888888888887654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.02  E-value=1.2e-09  Score=96.29  Aligned_cols=167  Identities=11%  Similarity=0.060  Sum_probs=106.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC------CeEEEEeCC----CCCCcchhhhhcCC--CCe-eEEecccCCcccCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNY----FTGSKDNLRKWIGH--PRF-ELIRHDVTEPLLIEV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~------~~V~~~~r~----~~~~~~~~~~~~~~--~~~-~~~~~d~~~~~~~~~   98 (346)
                      .|||+||||+||+|++++..|+..+.      .+|+++++.    ..........+...  +-. ++...+-......++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA   84 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence            47999999999999999999999872      178888874    11011111111111  111 111111111235589


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C--eEEEEecccc---cCCCCCCCCCCCCcCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A--RILLTSTSEV---YGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~--r~i~~SS~~v---~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+|||+||...  ....+....+..|+..+.++++++.+.+ .  +||++|...-   +--..   ..       ....+
T Consensus        85 D~Vi~~ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~---~~-------~~~p~  152 (329)
T 1b8p_A           85 DVALLVGARPR--GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMK---SA-------PSLPA  152 (329)
T ss_dssp             SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHH---TC-------TTSCG
T ss_pred             CEEEEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHH---Hc-------CCCCH
Confidence            99999998543  2344567788999999999999999874 3  8999987431   10000   00       01112


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ...++.++....++...+++..+++...++...|+|.+
T Consensus       153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H  190 (329)
T 1b8p_A          153 KNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH  190 (329)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred             HHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence            24588888888888888888888877777766678854

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.00  E-value=1.5e-09  Score=80.66  Aligned_cols=93  Identities=22%  Similarity=0.137  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-----cCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~vi~~a  105 (346)
                      ++|+|+|+|+ |++|+.+++.|.+.|.++|++++|+.    +...... ..++..+.+|+.+..     ..++|+|||++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~----~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL----AALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH----HHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH----HHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            4679999999 99999999999999867899999843    2222222 346788889988753     23799999998


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                      +..                  ....+++++.+.+++++.+|+
T Consensus        78 ~~~------------------~~~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           78 PFF------------------LTPIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             CGG------------------GHHHHHHHHHHTTCEEECCCS
T ss_pred             Cch------------------hhHHHHHHHHHhCCCEEEecC
Confidence            421                  245788889999987665554

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.94  E-value=2.8e-09  Score=115.86  Aligned_cols=161  Identities=12%  Similarity=0.076  Sum_probs=111.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCCCCCc---chhhhhcC-CCCeeEEecccCCcccC--------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSK---DNLRKWIG-HPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~---~~~~~~~~-~~~~~~~~~d~~~~~~~--------   96 (346)
                      ..++++|||||+|.||+.+++.|.++| .+ |++++|+.....   .....+.. ..++..+.+|+++.+..        
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~G-a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~ 1960 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRG-AQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT 1960 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT-CCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCC-CCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999 65 777888654332   11112111 23577889999986432        


Q ss_pred             ---CCCEEEEcccCCCcc----ccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 ---EVDQIYHLACPASPI----FYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                         .+|+|||+||.....    ...++....+++|+.++.++.+++...-   .+||++||....-.             
T Consensus      1961 ~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g------------- 2027 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG------------- 2027 (2512)
T ss_dssp             HHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT-------------
T ss_pred             hcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC-------------
Confidence               599999999965422    1335667788999999999988776531   38999999875421             


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccC
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG  208 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G  208 (346)
                         ......|+.+|...+.+.+....+ +++.+.+-++.+-+
T Consensus      2028 ---~~g~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2028 ---NAGQANYGFANSAMERICEKRRHD-GLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             ---CTTCHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBCT
T ss_pred             ---CCCcHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcCC
Confidence               112256999999999999876554 88888888876543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.79  E-value=3e-08  Score=86.32  Aligned_cols=112  Identities=14%  Similarity=0.049  Sum_probs=74.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeC--CCCCCcc---hhhhhc-CCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN--YFTGSKD---NLRKWI-GHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~---~~~~~~-~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||+||||+|++|.+++..|+..+. .++.++++  .......   .+.... ....+++...|  .....++|+|||+|
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~--~~a~~~aDvVi~~a   78 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG--YEDTAGSDVVVITA   78 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC--GGGGTTCSEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCC--HHHhCCCCEEEEcC
Confidence            6999999999999999999998873 25777776  3211111   011110 01233444332  34466899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecc
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS  148 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~  148 (346)
                      +...  .........+..|+..+.++++++++.+. .+|+++|-
T Consensus        79 g~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           79 GIPR--QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             CCCC--CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            8542  22334566789999999999999999876 56666653

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.78  E-value=7.7e-08  Score=104.91  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCchh-HHHHHHHHHHhcCCCeEEEEeCCCCCC----cchhhhhcCC--CCeeEEecccCCccc--------
Q 019060           31 SNMRILVTGGAGF-IGSHLVDKLMENEKNEVIVVDNYFTGS----KDNLRKWIGH--PRFELIRHDVTEPLL--------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~-iG~~l~~~L~~~g~~~V~~~~r~~~~~----~~~~~~~~~~--~~~~~~~~d~~~~~~--------   95 (346)
                      .+|++|||||++. ||+++++.|++.| ..|++++|+....    .+.+.+.+..  ..+..+.+|+++.+.        
T Consensus      2135 ~gKvaLVTGAs~GsIG~AiA~~La~~G-A~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2135 XDEVAVVTGASKGSIAASVVGQLLDGG-ATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCEEEEESCCTTSHHHHHHHHHHHTT-CEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChhHHHHHHHHHHHHCC-CEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4789999999999 9999999999999 9999999864321    1112222222  246678999998532        


Q ss_pred             --------CCCCEEEEcccCC----Cc-----cccccCh----HHHHHHHHHHHHHHHHHHHH----cCC----eEEEEe
Q 019060           96 --------IEVDQIYHLACPA----SP-----IFYKYNP----VKTIKTNVIGTLNMLGLAKR----VGA----RILLTS  146 (346)
Q Consensus        96 --------~~~d~vi~~a~~~----~~-----~~~~~~~----~~~~~~n~~~~~~l~~~~~~----~~~----r~i~~S  146 (346)
                              -++|++|||||..    ..     .....+.    +..+++|+.++..+++++..    .+.    .+|..+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                    2589999999961    10     0111223    33478888888777766543    222    233222


Q ss_pred             cccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH--h--CCceEEEEeccccCCCCCCCCccHHHHH
Q 019060          147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ--H--GIEIRIARIFNTYGPRMNIDDGRVVSNF  222 (346)
Q Consensus       147 S~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~ivR~~~i~G~~~~~~~~~~~~~~  222 (346)
                      |.. .+.                ......|+.+|...+.+.+.++.+  .  ++.++.+.||.+-+...... .......
T Consensus      2294 ss~-~g~----------------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~-~~~~~~~ 2355 (3089)
T 3zen_D         2294 SPN-RGM----------------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQ-NDAIVSA 2355 (3089)
T ss_dssp             CSS-TTS----------------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTT-TTTTHHH
T ss_pred             Ccc-ccc----------------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCccccc-chhHHHH
Confidence            211 110                011236999999999999999887  3  46778888988874432111 1111111


Q ss_pred             HHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-----CCc--EEecCCC---CCCHHHHHHHHHH
Q 019060          223 IAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-----TGP--INIGNPG---EFTMLELAENVKE  285 (346)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-----~~~--~~~~~~~---~~s~~ei~~~i~~  285 (346)
                          .....          ......+|+|.+++.++....     ...  ..+.++-   ...+.++...+.+
T Consensus      2356 ----~~~~~----------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D         2356 ----VEEAG----------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp             ----HGGGS----------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred             ----HHhcC----------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence                11110          112278999999999886432     122  3344543   3588888876543

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.77  E-value=3.5e-08  Score=86.37  Aligned_cols=167  Identities=10%  Similarity=0.064  Sum_probs=98.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeC--CCCCCcc---hhhhh--cCCCCeeEEecc-cCCcccCCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN--YFTGSKD---NLRKW--IGHPRFELIRHD-VTEPLLIEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r--~~~~~~~---~~~~~--~~~~~~~~~~~d-~~~~~~~~~d~vi~  103 (346)
                      |||+||||+|++|++++..|+..+. .++.++++  .......   .+...  .....+++...+ -....+.++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            6999999999999999999998873 35777776  2210110   01111  111233444332 12345668999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH-hHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE-GKRV  182 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~-sK~~  182 (346)
                      +||...  ....+....+..|+..+.++++++++.+..+|+++|--+---.. .....      ....+...+|. +...
T Consensus        81 ~Ag~~~--~~g~~r~dl~~~N~~i~~~i~~~i~~~~~~~vlv~SNPv~~~t~-~~~k~------~~~p~~rviG~gt~LD  151 (313)
T 1hye_A           81 TSGVPR--KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVITNPVDVMTY-KALVD------SKFERNQVFGLGTHLD  151 (313)
T ss_dssp             CCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECSSSHHHHHH-HHHHH------HCCCTTSEEECTTHHH
T ss_pred             CCCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecCcHHHHHH-HHHHh------hCcChhcEEEeCccHH
Confidence            998543  22345567889999999999999998863355555532210000 00000      01233355776 6666


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGP  209 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~  209 (346)
                      ..++....++..+++..-++. .++|.
T Consensus       152 ~~r~~~~la~~lgv~~~~v~~-~v~G~  177 (313)
T 1hye_A          152 SLRFKVAIAKFFGVHIDEVRT-RIIGE  177 (313)
T ss_dssp             HHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred             HHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence            777766677777765544553 55553

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.73  E-value=3.7e-08  Score=86.61  Aligned_cols=111  Identities=14%  Similarity=0.000  Sum_probs=74.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC--CC-CeeEEec--ccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG--HP-RFELIRH--DVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~--~~-~~~~~~~--d~~~~~~~~~d~vi~~a  105 (346)
                      .|||+|+||+|++|..++..|+..|. ++|+++++...  ......+..  .+ .+..+..  |+ .....++|+|||+|
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~~~~t~d~-~~al~gaDvVi~~a   84 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRGFLGQQQL-EAALTGMDLIIVPA   84 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEEEESHHHH-HHHHTTCSEEEECC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEEEeCCCCH-HHHcCCCCEEEEcC
Confidence            57999999999999999999988763 57888887542  111111111  11 2222211  11 12356899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS  147 (346)
                      +...  ........+...|+..+.++++++.+.+. .+|+++|
T Consensus        85 g~~~--~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S  125 (326)
T 1smk_A           85 GVPR--KPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS  125 (326)
T ss_dssp             CCCC--CSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CcCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            8543  22234456789999999999999999876 5666666

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.37  E-value=1.5e-07  Score=81.39  Aligned_cols=77  Identities=9%  Similarity=0.133  Sum_probs=54.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .++++|||||+|++|+++++.|++.| ..|++++|+.....+.........++.++.+|+.+.+.     .++|+|||++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G-~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            46899999999999999999999999 88999998642211111111111245677788876532     3589999999


Q ss_pred             cCC
Q 019060          106 CPA  108 (346)
Q Consensus       106 ~~~  108 (346)
                      +..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.30  E-value=9.6e-07  Score=80.06  Aligned_cols=94  Identities=15%  Similarity=0.252  Sum_probs=65.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC-------CCCEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI-------EVDQI  101 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-------~~d~v  101 (346)
                      |+|+|+|| |++|+.+++.|.++|.  ..|.+.+|+..+.......+..  ..++..+.+|+.+.+..       ++|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            69999998 9999999999999984  2899999864322221111111  13578889999876432       48999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEE
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~  145 (346)
                      ||++++..                  ...++++|.+.+++++-+
T Consensus        81 in~ag~~~------------------~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           81 LNIALPYQ------------------DLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             EECSCGGG------------------HHHHHHHHHHHTCCEEES
T ss_pred             EECCCccc------------------ChHHHHHHHHhCCCEEEe
Confidence            99986421                  135778888888876643

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.27  E-value=8.9e-06  Score=71.82  Aligned_cols=76  Identities=16%  Similarity=-0.014  Sum_probs=55.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHH-hcCCCeEEEEeCCCCCCcch-----------hhhhcC--CCCeeEEecccCCcccC-
Q 019060           32 NMRILVTGGAGFIGSHLVDKLM-ENEKNEVIVVDNYFTGSKDN-----------LRKWIG--HPRFELIRHDVTEPLLI-   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~-~~g~~~V~~~~r~~~~~~~~-----------~~~~~~--~~~~~~~~~d~~~~~~~-   96 (346)
                      .|++|||||++.+|.+.+..|. +.| ..|+++.+........           ..+...  ......+.+|+.+.+.. 
T Consensus        50 pK~vLVtGaSsGiGlA~AialAf~~G-A~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           50 PKNVLVLGCSNGYGLASRITAAFGYG-AATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHHC-CEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHhhCC-CCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            5899999999999999999987 678 8888888754333221           111111  23577899999986432 


Q ss_pred             -----------CCCEEEEcccCC
Q 019060           97 -----------EVDQIYHLACPA  108 (346)
Q Consensus        97 -----------~~d~vi~~a~~~  108 (346)
                                 ++|++||+++..
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence                       699999999865

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.27  E-value=5.3e-06  Score=72.41  Aligned_cols=111  Identities=14%  Similarity=0.010  Sum_probs=73.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC--C-CeeEEec-ccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH--P-RFELIRH-DVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~--~-~~~~~~~-d~~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+||+|++|..++..|+..+. ++|.++++..  .......+...  + ++..+.+ +-......+.|+||+++|.
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~   78 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV   78 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence            6999999999999999999988763 6899999864  11111121111  1 2222211 1111235689999999986


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  ....+....+..|+.....+++.+.+...  ++|++|-
T Consensus        79 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN  118 (314)
T 1mld_A           79 PR--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (314)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            43  22233445678999999999999888764  7887764

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.26  E-value=6.7e-06  Score=62.53  Aligned_cols=68  Identities=22%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~~a  105 (346)
                      +|+|+|+|+ |++|+.+++.|.+.| ++|++++|+.    +.........++..+.+|..+..      ..++|+||++.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g-~~v~~~d~~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   77 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   77 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCH----HHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence            489999986 999999999999999 9999998843    22222211124566777776542      34699999986

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.24  E-value=4e-06  Score=64.07  Aligned_cols=94  Identities=17%  Similarity=0.185  Sum_probs=62.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~~a  105 (346)
                      +++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.    +..... ...+...+.+|..+.+      ..++|+||+++
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g-~~v~~~d~~~----~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMG-HEVLAVDINE----EKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT-CCCEEEESCH----HHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCH----HHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence            457999998 999999999999999 8999998742    222221 1224566778876642      23699999987


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecc
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTS  148 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~  148 (346)
                      +..        .    +.|.    .+...+++.+. ++|..++.
T Consensus        79 ~~~--------~----~~~~----~~~~~~~~~~~~~ii~~~~~  106 (144)
T 2hmt_A           79 GAN--------I----QAST----LTTLLLKELDIPNIWVKAQN  106 (144)
T ss_dssp             CSC--------H----HHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred             CCc--------h----HHHH----HHHHHHHHcCCCeEEEEeCC
Confidence            421        0    1222    35566667666 56655544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.23  E-value=3.4e-06  Score=75.49  Aligned_cols=90  Identities=19%  Similarity=0.165  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      ...|||+|+|| |++|+.+++.|.+ . ++|.+.+|+.    ..+.+.  .+.+..+..|..|.+.     .+.|+||++
T Consensus        14 g~~mkilvlGa-G~vG~~~~~~L~~-~-~~v~~~~~~~----~~~~~~--~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~   84 (365)
T 3abi_A           14 GRHMKVLILGA-GNIGRAIAWDLKD-E-FDVYIGDVNN----ENLEKV--KEFATPLKVDASNFDKLVEVMKEFELVIGA   84 (365)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHTT-T-SEEEEEESCH----HHHHHH--TTTSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCccEEEEECC-CHHHHHHHHHHhc-C-CCeEEEEcCH----HHHHHH--hccCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence            44689999998 9999999998864 4 8899988743    222222  2356778888887643     379999998


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~S  146 (346)
                      +++..                  ...++++|.+.+++++=+|
T Consensus        85 ~p~~~------------------~~~v~~~~~~~g~~yvD~s  108 (365)
T 3abi_A           85 LPGFL------------------GFKSIKAAIKSKVDMVDVS  108 (365)
T ss_dssp             CCGGG------------------HHHHHHHHHHHTCEEEECC
T ss_pred             cCCcc------------------cchHHHHHHhcCcceEeee
Confidence            85421                  2468899999999887654

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.22  E-value=5.8e-06  Score=75.87  Aligned_cols=102  Identities=18%  Similarity=0.187  Sum_probs=67.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      +++|+|+| +|++|+++++.|.+.| ++|++++|+.    +....... ..++..+.+|+.+...     .++|+|||++
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G-~~V~v~~R~~----~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a   76 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSG-IKVTVACRTL----ESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI   76 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTT-CEEEEEESSH----HHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCc-CEEEEEECCH----HHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECC
Confidence            57899998 8999999999999999 8999999853    22222211 1246778889886532     3799999999


Q ss_pred             cCCCccccccChHHHHHH--H-------HHHHHHHHHHHHHcCCeE
Q 019060          106 CPASPIFYKYNPVKTIKT--N-------VIGTLNMLGLAKRVGARI  142 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~~r~  142 (346)
                      +......   -....++.  +       .....+++++|++.|+++
T Consensus        77 ~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~~  119 (450)
T 1ff9_A           77 PYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV  119 (450)
T ss_dssp             C--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCEE
T ss_pred             ccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCeE
Confidence            7543211   01111111  1       124678889999988764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.20  E-value=9.1e-06  Score=62.05  Aligned_cols=68  Identities=19%  Similarity=0.255  Sum_probs=52.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a  105 (346)
                      +++|+|+|+ |.+|+.+++.|.+.| ++|++++++.    +...... ..++.++.+|.+++..      .++|+||.+.
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g-~~V~~id~~~----~~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~   78 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAG-KKVLAVDKSK----EKIELLE-DEGFDAVIADPTDESFYRSLDLEGVSAVLITG   78 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCH----HHHHHHH-HTTCEEEECCTTCHHHHHHSCCTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC-CeEEEEECCH----HHHHHHH-HCCCcEEECCCCCHHHHHhCCcccCCEEEEec
Confidence            468999997 999999999999999 9999999843    2222222 2367888999988643      3689999876


Q ss_pred             c
Q 019060          106 C  106 (346)
Q Consensus       106 ~  106 (346)
                      +
T Consensus        79 ~   79 (141)
T 3llv_A           79 S   79 (141)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.17  E-value=5.5e-06  Score=68.21  Aligned_cols=73  Identities=21%  Similarity=0.332  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-
Q 019060           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-   93 (346)
Q Consensus        31 ~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-   93 (346)
                      .+|+||||||                ||.+|.++++.|+++| ++|+++.|...-...      ...+++.+..+..+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~G-a~V~lv~~~~~~~~~------~~~~~~~~~v~s~~em   74 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAG-YEVCLITTKRALKPE------PHPNLSIREITNTKDL   74 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTT-CEEEEEECTTSCCCC------CCTTEEEEECCSHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCC-CEEEEEeCCcccccc------CCCCeEEEEHhHHHHH
Confidence            3789999999                9999999999999999 999999986421110      012455555443321 


Q ss_pred             ------ccCCCCEEEEcccCCCc
Q 019060           94 ------LLIEVDQIYHLACPASP  110 (346)
Q Consensus        94 ------~~~~~d~vi~~a~~~~~  110 (346)
                            ...++|++||+||....
T Consensus        75 ~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           75 LIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHhcCCCCEEEEcCccccc
Confidence                  12369999999997654

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.12  E-value=2.7e-06  Score=75.11  Aligned_cols=99  Identities=10%  Similarity=0.118  Sum_probs=61.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC-----CCeEEEEeCCC-CCC-cchhhhhcCC-CCeeEEecccCCcccCCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE-----KNEVIVVDNYF-TGS-KDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g-----~~~V~~~~r~~-~~~-~~~~~~~~~~-~~~~~~~~d~~~~~~~~~d~vi~  103 (346)
                      +|||+|.||||++|+.|++.|++++     ..+++.+.+.. ... -......+.. ..+.+...|  .....++|+||.
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvVf~   86 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAVFL   86 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEEEE
Confidence            4799999999999999999999887     45777665322 111 1111111110 123333222  122337999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      +.+...                  ...++..+ +.|+++|-+|+.+-.
T Consensus        87 alg~~~------------------s~~~~~~~-~~G~~vIDlSa~~R~  115 (352)
T 2nqt_A           87 ALPHGH------------------SAVLAQQL-SPETLIIDCGADFRL  115 (352)
T ss_dssp             CCTTSC------------------CHHHHHHS-CTTSEEEECSSTTTC
T ss_pred             CCCCcc------------------hHHHHHHH-hCCCEEEEECCCccC
Confidence            875432                  34566667 778899999987643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.08  E-value=7.1e-05  Score=58.06  Aligned_cols=71  Identities=18%  Similarity=0.199  Sum_probs=50.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYH  103 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~  103 (346)
                      ..+++|+|+|+ |.+|+.+++.|.+.| ++|++++|+..    .........+...+.+|..+..      ..++|+||.
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g-~~V~vid~~~~----~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSG-HSVVVVDKNEY----AFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCGG----GGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCHH----HHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence            34689999995 999999999999999 99999998532    2222211235566777765432      236899998


Q ss_pred             ccc
Q 019060          104 LAC  106 (346)
Q Consensus       104 ~a~  106 (346)
                      +.+
T Consensus        91 ~~~   93 (155)
T 2g1u_A           91 FTN   93 (155)
T ss_dssp             CSS
T ss_pred             EeC
Confidence            763

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.05  E-value=6.2e-06  Score=72.33  Aligned_cols=114  Identities=16%  Similarity=0.135  Sum_probs=73.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-Ce-----EEEEeCCCC--CCcchhhhhcC--CCCeeEEec-ccCCcccCCCCEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NE-----VIVVDNYFT--GSKDNLRKWIG--HPRFELIRH-DVTEPLLIEVDQI  101 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~-----V~~~~r~~~--~~~~~~~~~~~--~~~~~~~~~-d~~~~~~~~~d~v  101 (346)
                      |||+||||+|+||++++..|...+. .+     ++++++...  ........+..  .+-..-+.. +-......++|+|
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDvV   83 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVA   83 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCEE
Confidence            6999999999999999999988763 14     888887421  01111111111  111111111 1112245689999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC---eEEEEecc
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---RILLTSTS  148 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---r~i~~SS~  148 (346)
                      |++||...  ....+....++.|+..+.++++++.+.+.   +++.+|-.
T Consensus        84 vitAg~pr--kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP  131 (333)
T 5mdh_A           84 ILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP  131 (333)
T ss_dssp             EECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             EEeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence            99997532  23345667789999999999999998864   57777753

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.03  E-value=1.5e-05  Score=70.36  Aligned_cols=95  Identities=9%  Similarity=0.070  Sum_probs=60.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCC-CCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGH-PRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~-~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +|||.|.||||++|+.+++.|.+++..+++.+.+... ....+..   .+.. ..+.+...+    +..++|+||.+.+.
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~-~g~~~~~~~~~~~g~~~~~~~~~~----~~~~vDvV~~a~g~   78 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRF-AGEPVHFVHPNLRGRTNLKFVPPE----KLEPADILVLALPH   78 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTT-TTSBGGGTCGGGTTTCCCBCBCGG----GCCCCSEEEECCCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchh-hCchhHHhCchhcCcccccccchh----HhcCCCEEEEcCCc
Confidence            4799999999999999999999887447777765321 1111111   1111 122222222    23579999998753


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      .                  ....++..+.+.|+++|-+|+..
T Consensus        79 ~------------------~s~~~a~~~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           79 G------------------VFAREFDRYSALAPVLVDLSADF  102 (345)
T ss_dssp             T------------------HHHHTHHHHHTTCSEEEECSSTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEcCccc
Confidence            2                  13456666677788999888864

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.01  E-value=1.4e-05  Score=70.40  Aligned_cols=95  Identities=16%  Similarity=0.181  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEe-CCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |+|+|+|.||||++|+.+++.|++++  ..+++.+. |........    +....+.+...|.  ....++|+||.+.+.
T Consensus         5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~----~~g~~i~~~~~~~--~~~~~~DvV~~a~g~   78 (340)
T 2hjs_A            5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG----FAESSLRVGDVDS--FDFSSVGLAFFAAAA   78 (340)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE----ETTEEEECEEGGG--CCGGGCSEEEECSCH
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccc----cCCcceEEecCCH--HHhcCCCEEEEcCCc
Confidence            45799999999999999999999665  23555553 322111110    1111223322232  223479999988742


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      .                  ....++..+.+.|+++|-+|+.+
T Consensus        79 ~------------------~s~~~a~~~~~aG~kvId~Sa~~  102 (340)
T 2hjs_A           79 E------------------VSRAHAERARAAGCSVIDLSGAL  102 (340)
T ss_dssp             H------------------HHHHHHHHHHHTTCEEEETTCTT
T ss_pred             H------------------HHHHHHHHHHHCCCEEEEeCCCC
Confidence            1                  24456677778888988888775

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.95  E-value=6.4e-05  Score=65.64  Aligned_cols=112  Identities=13%  Similarity=0.111  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcch---hhhhc--CCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKWI--GHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      ..|||.|+|+ |++|..++..|+..|. .+|++++++.......   +....  ....++....|.  ....+.|+||.+
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--~a~~~aDvVvi~   80 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--EDCKDADIVCIC   80 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--GGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--HHhCCCCEEEEe
Confidence            3589999995 9999999999999983 2899998743211111   11110  012344444443  345679999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +|..  .....+....+..|......+++.+.+...  .++.+|-
T Consensus        81 ag~p--~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           81 AGAN--QKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             CSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             cccC--CCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            9753  223345667789999999999999988764  6776664

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.95  E-value=2.1e-05  Score=69.86  Aligned_cols=101  Identities=13%  Similarity=0.135  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC----------CCeeEEecccCCcccCCCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~d~  100 (346)
                      |+|||.|.||+|++|+.+++.|.+++..+|+++.++.......+......          ..+.+...|..+....++|+
T Consensus         7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   86 (354)
T 1ys4_A            7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDI   86 (354)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCE
T ss_pred             ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCE
Confidence            34799999999999999999998876468877764321111112111110          11222222332211127999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      ||.+.+..                  ....++..+.+.|+++|-.|+..
T Consensus        87 V~~atp~~------------------~~~~~a~~~~~aG~~VId~s~~~  117 (354)
T 1ys4_A           87 VFSALPSD------------------LAKKFEPEFAKEGKLIFSNASAY  117 (354)
T ss_dssp             EEECCCHH------------------HHHHHHHHHHHTTCEEEECCSTT
T ss_pred             EEECCCch------------------HHHHHHHHHHHCCCEEEECCchh
Confidence            99876321                  23345666667788877777654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.93  E-value=1.7e-05  Score=73.01  Aligned_cols=73  Identities=22%  Similarity=0.282  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .+++|+|+|+ |++|+.+++.|++.+.++|++++|+..    ....+....++..+..|+.+.+.     .++|+|||++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~----ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~t   96 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLA----NAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLI   96 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHH----HHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHH----HHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECC
Confidence            3578999997 999999999999983389999998532    22222111246667788776532     2799999998


Q ss_pred             cCC
Q 019060          106 CPA  108 (346)
Q Consensus       106 ~~~  108 (346)
                      +..
T Consensus        97 p~~   99 (467)
T 2axq_A           97 PYT   99 (467)
T ss_dssp             CGG
T ss_pred             chh
Confidence            653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.90  E-value=1.7e-05  Score=61.41  Aligned_cols=71  Identities=15%  Similarity=0.233  Sum_probs=51.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~~a  105 (346)
                      .++|+|+|+ |.+|+.+++.|.+.| ++|++++++.....+.+.... ..++.++.+|.+++.      ..++|.||.+.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g-~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            568999995 999999999999999 999999984211111222222 236889999988763      33699999765

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.88  E-value=4e-05  Score=62.88  Aligned_cols=68  Identities=19%  Similarity=0.245  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc
Q 019060           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL   94 (346)
Q Consensus        31 ~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~   94 (346)
                      .+++||||||                ||.+|.++++.|.++| ++|+++.|...- .  .     ..+++.  .|+.+..
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~G-a~V~l~~~~~~l-~--~-----~~g~~~--~dv~~~~   75 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-ANVTLVSGPVSL-P--T-----PPFVKR--VDVMTAL   75 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-CEEEEEECSCCC-C--C-----CTTEEE--EECCSHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCC-CEEEEEECCccc-c--c-----CCCCeE--EccCcHH
Confidence            4789999999                6999999999999999 999998875311 0  0     113333  3333321


Q ss_pred             ---------cCCCCEEEEcccCCC
Q 019060           95 ---------LIEVDQIYHLACPAS  109 (346)
Q Consensus        95 ---------~~~~d~vi~~a~~~~  109 (346)
                               ..++|++||+||...
T Consensus        76 ~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           76 EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHHHHHhcCCCCEEEECCcccC
Confidence                     225999999999764

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.87  E-value=0.00012  Score=63.49  Aligned_cols=112  Identities=18%  Similarity=0.090  Sum_probs=75.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc-CC-CeEEEEeCCCCCCcchhhhhcCCC-CeeEEe--cccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN-EK-NEVIVVDNYFTGSKDNLRKWIGHP-RFELIR--HDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~-g~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~--~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+||+|.+|..++..|... +. .+++++++.. ........+...+ ..+...  ++-....+.+.|+||.+||.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence            79999999999999999999876 42 5788888754 2222222222221 122221  11122345689999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      .  .....+....++.|..-...+.+.+.+...  .++.+|-
T Consensus        80 ~--rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN  119 (312)
T 3hhp_A           80 A--RKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (312)
T ss_dssp             S--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            3  233456778889999999999999888754  6777664

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.87  E-value=3.6e-05  Score=68.14  Aligned_cols=95  Identities=15%  Similarity=0.174  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEe-CCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |+++|.|.||||++|+.|++.|.+++ +   ++..+. ++.....-   . +....+.+...|  .....++|+||.+.+
T Consensus         1 m~~kVaIvGATG~vG~eLlrlL~~~~-~p~~el~~~as~~saG~~~---~-~~~~~~~~~~~~--~~~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            1 MGYTVAVVGATGAVGAQMIKMLEEST-LPIDKIRYLASARSAGKSL---K-FKDQDITIEETT--ETAFEGVDIALFSAG   73 (366)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCC-CCEEEEEEEECTTTTTCEE---E-ETTEEEEEEECC--TTTTTTCSEEEECSC
T ss_pred             CCcEEEEECCCChHHHHHHHHHhcCC-CCcEEEEEEEccccCCCcc---e-ecCCCceEeeCC--HHHhcCCCEEEECCC
Confidence            46799999999999999999998875 4   334443 21111111   1 111122232223  233457999998874


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                      ..                  .....+..+.+.|+++|=.|+.+=
T Consensus        74 ~~------------------~s~~~a~~~~~~G~~vIDlSa~~R   99 (366)
T 3pwk_A           74 SS------------------TSAKYAPYAVKAGVVVVDNTSYFR   99 (366)
T ss_dssp             HH------------------HHHHHHHHHHHTTCEEEECSSTTT
T ss_pred             hH------------------hHHHHHHHHHHCCCEEEEcCCccc
Confidence            21                  234556666677889998888753

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.84  E-value=3.5e-05  Score=67.73  Aligned_cols=114  Identities=13%  Similarity=0.163  Sum_probs=72.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcch---hhhh-cCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDN---LRKW-IGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      +.+|||.|+|++|++|+.++..|+..|. .+|++++.........   +... +...++.+ ..|+ .....+.|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t~d~-~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-TSDI-KEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-ESCH-HHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-cCCH-HHHhCCCCEEEEc
Confidence            3468999999999999999999999884 5899998743211111   1111 11112222 1221 1234579999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--e-EEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--R-ILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r-~i~~SS  147 (346)
                      ||..  .....+....+..|......+++.+.+.+.  . ++.+|-
T Consensus        84 aG~p--~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           84 GGAP--RKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             CC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred             cCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            9753  223345667789999999999999988764  3 566654

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.82  E-value=3.2e-05  Score=68.45  Aligned_cols=98  Identities=10%  Similarity=0.136  Sum_probs=59.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC----------CCeeEEecccCCcccCCCCEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH----------PRFELIRHDVTEPLLIEVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~d~v  101 (346)
                      ++||.|.||+|++|+.+++.|.++...+++.+..+.......+......          ..+.+...|..  ...++|+|
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~vDvV   81 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYE--DHKDVDVV   81 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGG--GGTTCSEE
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHH--HhcCCCEE
Confidence            5799999999999999999998876457777752111111111111110          12223222321  22479999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      |.+.+..                  ....++..+.+.|+++|-.|+.+
T Consensus        82 f~atp~~------------------~s~~~a~~~~~aG~~VId~s~~~  111 (350)
T 2ep5_A           82 LSALPNE------------------LAESIELELVKNGKIVVSNASPF  111 (350)
T ss_dssp             EECCCHH------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             EECCChH------------------HHHHHHHHHHHCCCEEEECCccc
Confidence            9776311                  24456777778888988777764

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.81  E-value=0.00022  Score=62.02  Aligned_cols=104  Identities=15%  Similarity=0.100  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~  103 (346)
                      |+|||.|+|+ |.+|..++..|...| + .|++++++..........+..     ....++.. .|+  ....++|+||.
T Consensus         1 M~~kI~VIGa-G~vG~~~a~~la~~g-~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~   76 (309)
T 1ur5_A            1 MRKKISIIGA-GFVGSTTAHWLAAKE-LGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--ADTANSDVIVV   76 (309)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTT-CSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--HHHCCCCEEEE
Confidence            3579999998 999999999999998 5 888888754222111111111     11233332 454  34568999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (346)
                      +++...  ............|......+.+.+.+...
T Consensus        77 a~g~p~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p  111 (309)
T 1ur5_A           77 TSGAPR--KPGMSREDLIKVNADITRACISQAAPLSP  111 (309)
T ss_dssp             CCCC----------CHHHHHHHHHHHHHHHHHGGGCT
T ss_pred             cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            997532  11222334567888888999998888754

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.77  E-value=5.3e-05  Score=67.23  Aligned_cols=96  Identities=15%  Similarity=0.231  Sum_probs=58.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCCCC-eeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPR-FELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~-~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+||.|.||+|++|+.+++.|.+++..+++.+.+... ....+..   .+.... .++...+  +....++|+||.+.+.
T Consensus        16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~-~g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp~   92 (359)
T 1xyg_A           16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRK-AGQSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLPH   92 (359)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTT-TTSCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCCT
T ss_pred             CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchh-cCCCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCCc
Confidence            4799999999999999999999887457777765321 1111111   111100 0111111  1122369999998754


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      ..                  +...+..+ +.|+++|-.|+..
T Consensus        93 ~~------------------s~~~a~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A           93 GT------------------TQEIIKEL-PTALKIVDLSADF  115 (359)
T ss_dssp             TT------------------HHHHHHTS-CTTCEEEECSSTT
T ss_pred             hh------------------HHHHHHHH-hCCCEEEECCccc
Confidence            32                  34455666 7788888888864

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.77  E-value=5.4e-05  Score=66.29  Aligned_cols=98  Identities=12%  Similarity=0.160  Sum_probs=60.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC--CCcchhhh---hcCC-CCeeEEec-ccCCccc-CCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRK---WIGH-PRFELIRH-DVTEPLL-IEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~--~~~~~~~~---~~~~-~~~~~~~~-d~~~~~~-~~~d~vi~  103 (346)
                      +++|.|+|+||++|+.|++.|.++...++..+.+...  .....+..   ++.. .++.+... |..  .. .++|+||.
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~--~~~~~~Dvvf~   81 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDIS--EFSPGVDVVFL   81 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGG--GTCTTCSEEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHH--HHhcCCCEEEE
Confidence            3799999999999999999999876467776644321  11111211   1111 13333332 322  22 47999998


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      +.+.                  .....++..+.+.|+++|=.|+.+
T Consensus        82 a~p~------------------~~s~~~~~~~~~~g~~vIDlSa~f  109 (337)
T 3dr3_A           82 ATAH------------------EVSHDLAPQFLEAGCVVFDLSGAF  109 (337)
T ss_dssp             CSCH------------------HHHHHHHHHHHHTTCEEEECSSTT
T ss_pred             CCCh------------------HHHHHHHHHHHHCCCEEEEcCCcc
Confidence            7631                  123455666677788999999875

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.76  E-value=7.6e-05  Score=66.04  Aligned_cols=100  Identities=13%  Similarity=0.159  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC------C----CCeeEEecccCCcccCCCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------H----PRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~d~~~~~~~~~d~  100 (346)
                      ++++|.|+||||++|+.|++.|.++...++..+..... ....+.....      .    .+..+...|..  ...++|+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~--~~~~vDv   82 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK--LMDDVDI   82 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG--GCTTCCE
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCCHH--HhcCCCE
Confidence            45799999999999999999887765346665543221 1111211100      0    02222222222  2347999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      ||.+.+...                  ...++..+.+.|+++|=.|+.+=+
T Consensus        83 vf~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~R~  115 (359)
T 4dpl_A           83 IFSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDHRF  115 (359)
T ss_dssp             EEECCCTTT------------------HHHHHHHHHHTTCEEEECSSTTTT
T ss_pred             EEECCChHH------------------HHHHHHHHHHCCCEEEEcCCCccC
Confidence            998874321                  334555666778899999988643

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.76  E-value=7.6e-05  Score=66.04  Aligned_cols=100  Identities=13%  Similarity=0.159  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC------C----CCeeEEecccCCcccCCCCE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG------H----PRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~------~----~~~~~~~~d~~~~~~~~~d~  100 (346)
                      ++++|.|+||||++|+.|++.|.++...++..+..... ....+.....      .    .+..+...|..  ...++|+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s-aGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~--~~~~vDv   82 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS-VGKPYGEVVRWQTVGQVPKEIADMEIKPTDPK--LMDDVDI   82 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT-TTSBHHHHCCCCSSSCCCHHHHTCBCEECCGG--GCTTCCE
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh-cCCChhHhcccccccccccccccceEEeCCHH--HhcCCCE
Confidence            45799999999999999999887765346665543221 1111211100      0    02222222222  2347999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      ||.+.+...                  ...++..+.+.|+++|=.|+.+=+
T Consensus        83 vf~a~p~~~------------------s~~~a~~~~~~G~~vIDlSa~~R~  115 (359)
T 4dpk_A           83 IFSPLPQGA------------------AGPVEEQFAKEGFPVISNSPDHRF  115 (359)
T ss_dssp             EEECCCTTT------------------HHHHHHHHHHTTCEEEECSSTTTT
T ss_pred             EEECCChHH------------------HHHHHHHHHHCCCEEEEcCCCccC
Confidence            998874321                  334555666778899999988643

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.74  E-value=7e-05  Score=63.76  Aligned_cols=34  Identities=21%  Similarity=0.456  Sum_probs=27.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r   65 (346)
                      .|||+|+|++|.+|+.+++.+.+...++++++ ++
T Consensus         5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            47999999999999999999886543787744 44

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.73  E-value=3.7e-05  Score=63.35  Aligned_cols=67  Identities=13%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a  105 (346)
                      |+|+|+|+ |.+|+.+++.|.+.| ++|++++++.    +....+....++.++.+|.++...      .++|+||-+.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g-~~v~vid~~~----~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRK-YGVVIINKDR----ELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTT-CCEEEEESCH----HHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCH----HHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEec
Confidence            78999996 999999999999999 9999999743    233222222367889999888632      3699999765

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.71  E-value=0.00043  Score=60.35  Aligned_cols=109  Identities=16%  Similarity=0.143  Sum_probs=69.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .|||.|+|+ |++|..++-.|+..+ .  +|++++.+..........+...    ..+++...|  ..+..+.|+||.++
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~-~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~--~~a~~~aDvVii~~   82 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQ-TANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD--YSDVKDCDVIVVTA   82 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTT-CSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C--GGGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECC--HHHhCCCCEEEEcC
Confidence            579999997 999999999999988 5  8999998643322222221111    133333322  33466899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      +...  .........+..|+.....+++.+.+...  .+|.+|
T Consensus        83 g~p~--k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t  123 (318)
T 1y6j_A           83 GANR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  123 (318)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             CCCC--CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence            7532  22334556778899999999998887653  566554

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.70  E-value=0.00012  Score=63.77  Aligned_cols=114  Identities=11%  Similarity=0.114  Sum_probs=65.4

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccCCCCEEEE
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYH  103 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~d~vi~  103 (346)
                      +...|||.|+|+ |.+|+.++..|+..+. .++.+++++..........+..    ...+.....|.  ....+.|+||.
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~--~a~~~aDiVvi   82 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEY--SDAKDADLVVI   82 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCG--GGGTTCSEEEE
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcH--HHhcCCCEEEE
Confidence            445789999996 9999999999999883 2899998743211111111111    12344444332  34567999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +||...  ....+....++.|..-...+.+.+.+...  .++.+|-
T Consensus        83 ~ag~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           83 TAGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             CCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred             CCCCCC--CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence            997532  22344556778899999999999888764  6666664

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.69  E-value=0.00016  Score=62.21  Aligned_cols=110  Identities=17%  Similarity=0.076  Sum_probs=75.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcch---hhhhc--CCCCeeEEe-cccCCcccCCCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDN---LRKWI--GHPRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      |||.|+|+ |.+|..++..|...| +  +|.++++........   +....  -....++.. .|  .....+.|+||.+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~-~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDiVVia   76 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNL-DVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD--YSLLKGSEIIVVT   76 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHS-CCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC--GGGGTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC--HHHhCCCCEEEEC
Confidence            79999998 999999999999998 6  899999854221100   11100  011223332 23  4456689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      +|...  ....+....+..|..-...+.+.+.+.+.  .++.+|-.
T Consensus        77 ag~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNP  120 (294)
T 1oju_A           77 AGLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             CCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCc
Confidence            87532  23345667789999999999999988764  67777753

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.67  E-value=0.00025  Score=60.83  Aligned_cols=111  Identities=16%  Similarity=0.074  Sum_probs=75.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-----CCCeeEE-ecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+|+ |.||+.++-.|+.++. .++.+++............+.+     ....+.. ..|.  .+..+.|+||-+|
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~--~~~~~aDvVvitA   77 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY--SLLKGSEIIVVTA   77 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG--GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH--HHhCCCCEEEEec
Confidence            79999995 9999999999998885 5788888753211111111110     1122222 2233  2456799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      |..  .....+....++.|..-.+.+.+.+.+.+.  .++.+|-.
T Consensus        78 G~p--rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNP  120 (294)
T 2x0j_A           78 GLA--RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP  120 (294)
T ss_dssp             CCC--CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSS
T ss_pred             CCC--CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCc
Confidence            853  244567788899999999999999988764  56666653

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=97.67  E-value=7.7e-05  Score=66.37  Aligned_cols=101  Identities=10%  Similarity=0.095  Sum_probs=59.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCC-------CCeeEEecccCCcccCCCCEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGH-------PRFELIRHDVTEPLLIEVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~-------~~~~~~~~d~~~~~~~~~d~v  101 (346)
                      ++||.|.||||++|..|++.|.++...++..+.-+..+....+..   ++..       .+..+...|..+ ...++|+|
T Consensus        19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~-~~~~~Dvv   97 (381)
T 3hsk_A           19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEG-NFLECDVV   97 (381)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCT-TGGGCSEE
T ss_pred             ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhh-hcccCCEE
Confidence            468999999999999999988877634665543111111111211   1110       122232222210 23479999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                      |.+.+.                  .....++..+.+.|+++|=.|+.+=+
T Consensus        98 f~alp~------------------~~s~~~~~~~~~~G~~VIDlSa~fR~  129 (381)
T 3hsk_A           98 FSGLDA------------------DVAGDIEKSFVEAGLAVVSNAKNYRR  129 (381)
T ss_dssp             EECCCH------------------HHHHHHHHHHHHTTCEEEECCSTTTT
T ss_pred             EECCCh------------------hHHHHHHHHHHhCCCEEEEcCCcccC
Confidence            987631                  12345666667778899988887644

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.66  E-value=0.00078  Score=58.69  Aligned_cols=110  Identities=15%  Similarity=0.074  Sum_probs=74.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEE-ecccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi~~  104 (346)
                      +|||.|+| .|.+|..++..|...+ . +|+++++...........+..     ....++. ..|.  ....+.|+||.+
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~-~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~--~a~~~aDvVIi~   80 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQ-LGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY--KDLENSDVVIVT   80 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCC-CceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH--HHHCCCCEEEEc
Confidence            57999999 5999999999999988 6 899998865322211111111     1123333 2332  356689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +|...  ....+....+..|......+++.+.+...  .++.+|-
T Consensus        81 ag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           81 AGVPR--KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN  123 (321)
T ss_dssp             CSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCcCC--CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            87532  23345667788999999999999888764  6776654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.65  E-value=9.3e-05  Score=56.31  Aligned_cols=69  Identities=13%  Similarity=0.150  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYH  103 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~  103 (346)
                      .+.++|+|+|+ |.+|+.+++.|.+.| ++|++++++.    +...... ..++..+.+|.++.+.      .++|.||.
T Consensus         5 ~~~~~viIiG~-G~~G~~la~~L~~~g-~~v~vid~~~----~~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~   77 (140)
T 3fwz_A            5 DICNHALLVGY-GRVGSLLGEKLLASD-IPLVVIETSR----TRVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLIL   77 (140)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTT-CCEEEEESCH----HHHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred             cCCCCEEEECc-CHHHHHHHHHHHHCC-CCEEEEECCH----HHHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence            35678999995 999999999999999 9999999843    2332222 2478889999888643      26899987


Q ss_pred             cc
Q 019060          104 LA  105 (346)
Q Consensus       104 ~a  105 (346)
                      +.
T Consensus        78 ~~   79 (140)
T 3fwz_A           78 TI   79 (140)
T ss_dssp             CC
T ss_pred             EC
Confidence            65

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.65  E-value=0.00018  Score=63.15  Aligned_cols=94  Identities=13%  Similarity=0.164  Sum_probs=59.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEeC-CCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDN-YFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +|||.|.||||++|+.+++.|++++  ..+++.+.. ......-.    +....+.+...|.  ....++|+||.+.+..
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~----~~~~~i~~~~~~~--~~~~~vDvVf~a~g~~   76 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR----FNGKTVRVQNVEE--FDWSQVHIALFSAGGE   76 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE----ETTEEEEEEEGGG--CCGGGCSEEEECSCHH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee----ecCceeEEecCCh--HHhcCCCEEEECCCch
Confidence            5799999999999999999999883  256666653 22111111    1112333333332  2234799999877421


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                        .....+..+.+.|+++|-.|+.+
T Consensus        77 ------------------~s~~~a~~~~~~G~~vId~s~~~   99 (336)
T 2r00_A           77 ------------------LSAKWAPIAAEAGVVVIDNTSHF   99 (336)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEECSSTT
T ss_pred             ------------------HHHHHHHHHHHcCCEEEEcCCcc
Confidence                              24456666777888988888875

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.63  E-value=5.9e-05  Score=61.09  Aligned_cols=36  Identities=14%  Similarity=0.160  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+++|||+||+|.||..+++.+...| .+|++++|+
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~   72 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGS   72 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESS
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCC
Confidence            356899999999999999999999999 899999874

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.63  E-value=0.00022  Score=61.94  Aligned_cols=110  Identities=16%  Similarity=0.095  Sum_probs=73.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCC-CCCcchh-hhhcC-----CCCeeEE-ecccCCcccCCCCEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF-TGSKDNL-RKWIG-----HPRFELI-RHDVTEPLLIEVDQIY  102 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~-~~~~~~~-~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi  102 (346)
                      .++|.|+|+ |.+|..++..|...| + +|++++++. ....... ..+..     ....++. ..|  .....++|+||
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g-~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d--~~a~~~aDvVI   83 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKE-LADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD--YADTADSDVVV   83 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC--GGGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC--HHHhCCCCEEE
Confidence            579999996 999999999999999 8 999999852 1111111 11110     0112222 122  23456799999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      .++|...  ....+....+..|......+.+.+.+.+.  .++.+|-
T Consensus        84 iaag~p~--kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           84 ITAGIAR--KPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN  128 (315)
T ss_dssp             ECCSCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EeCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence            9987532  23355677889999999999998888764  6777764

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.62  E-value=0.00038  Score=60.69  Aligned_cols=112  Identities=13%  Similarity=0.043  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhc-----CCCCeeEE-ecccCCcccCCCCEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWI-----GHPRFELI-RHDVTEPLLIEVDQIYH  103 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~-~~d~~~~~~~~~d~vi~  103 (346)
                      .+|||.|+|+ |.+|..++..|...| + +|+++++...........+.     .....++. ..|.  ....+.|+||.
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~-~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~--~a~~~aDiVIi   81 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKE-LGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY--AAIEGADVVIV   81 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG--GGGTTCSEEEE
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH--HHHCCCCEEEE
Confidence            3579999997 999999999999998 7 99999986532211111110     01122332 2343  45668999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      ++|...  ....+....+..|..-...+++.+.+...  .++.+|-.
T Consensus        82 aag~p~--k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           82 TAGVPR--KPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             CCSCCC--C-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSS
T ss_pred             ccCcCC--CCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence            987532  22234456778899999999998888764  67777653

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.53  E-value=0.00077  Score=58.49  Aligned_cols=111  Identities=12%  Similarity=0.024  Sum_probs=71.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc-----CCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |||.|+|+ |.+|..++..|+..+. .+|++++++..........+.     .....+....+ ......+.|+||.++|
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~-~~~a~~~aDvVii~ag   78 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN-DYGPTEDSDVCIITAG   78 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES-SSGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC-CHHHhCCCCEEEECCC
Confidence            79999996 9999999999999883 289999986532221111111     01123333222 1334567999999987


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ....+....+..|..-...+.+.+.+...  .++.+|-
T Consensus        79 ~~~--kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           79 LPR--SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             C---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred             CCC--CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence            532  23345667789999999999999988764  6776664

>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}

Probab=97.52  E-value=0.00028  Score=61.81  Aligned_cols=91  Identities=18%  Similarity=0.117  Sum_probs=55.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeE---EEEe-CCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEV---IVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V---~~~~-r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      |||.|.||+|++|+.|++.|.+++ +.+   ..+. +....  ..+.  +....+.+...|..  .. ++|+||.+.+..
T Consensus         1 mkVaI~GAtG~iG~~llr~L~~~~-~~~~~l~~~~s~~~~g--~~l~--~~g~~i~v~~~~~~--~~-~~DvV~~a~g~~   72 (331)
T 2yv3_A            1 MRVAVVGATGAVGREILKVLEARN-FPLSELRLYASPRSAG--VRLA--FRGEEIPVEPLPEG--PL-PVDLVLASAGGG   72 (331)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTT-CCCSCCEEEECGGGSS--CEEE--ETTEEEEEEECCSS--CC-CCSEEEECSHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CCcEEEEEeeccccCC--CEEE--EcCceEEEEeCChh--hc-CCCEEEECCCcc
Confidence            689999999999999999999776 543   2221 11111  0110  11123444444432  23 899999887421


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                        .+...+..+.+.|+++|-.|+.+
T Consensus        73 ------------------~s~~~a~~~~~~G~~vId~s~~~   95 (331)
T 2yv3_A           73 ------------------ISRAKALVWAEGGALVVDNSSAW   95 (331)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEECSSSS
T ss_pred             ------------------chHHHHHHHHHCCCEEEECCCcc
Confidence                              23345556667788999888875

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.51  E-value=0.00051  Score=60.26  Aligned_cols=96  Identities=17%  Similarity=0.089  Sum_probs=58.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEe-CCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENE--KNEVIVVD-NYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +|+|.|.||||++|..|++.|.++.  ..++..+. ++.....-.   + .  +.+....++......++|+||.+.+..
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~---~-~--~~~~~~~~~~~~~~~~~Dvvf~a~~~~   74 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA---F-R--GQEIEVEDAETADPSGLDIALFSAGSA   74 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE---E-T--TEEEEEEETTTSCCTTCSEEEECSCHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee---e-c--CCceEEEeCCHHHhccCCEEEECCChH
Confidence            3689999999999999999988874  12345443 222111111   1 1  122222233333445799999887421


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVY  151 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~  151 (346)
                                        .....+..+.+.|+++|=.|+.+-+
T Consensus        75 ------------------~s~~~a~~~~~~G~~vID~Sa~~R~   99 (344)
T 3tz6_A           75 ------------------MSKVQAPRFAAAGVTVIDNSSAWRK   99 (344)
T ss_dssp             ------------------HHHHHHHHHHHTTCEEEECSSTTTT
T ss_pred             ------------------HHHHHHHHHHhCCCEEEECCCcccc
Confidence                              2345556666778899888887533

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.50  E-value=0.00077  Score=58.93  Aligned_cols=113  Identities=12%  Similarity=0.119  Sum_probs=72.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccCCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      .+.|||.|+|+ |.+|..++-.|+..+. .++.++++...........+...    ..+++.. | ...+..+.|+||.+
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~-~~~a~~~aDvVii~   83 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A-EYSDAKDADLVVIT   83 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C-CGGGGGGCSEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEEc
Confidence            35689999998 9999999999988873 37889987432111111111111    2334433 2 23345689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++...  ....+....+..|......+++.+.+...  .+|.+|-
T Consensus        84 ag~~~--k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  126 (326)
T 2zqz_A           84 AGAPQ--KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             CCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            97532  22344556778899999999988887754  6776654

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.47  E-value=0.00054  Score=59.70  Aligned_cols=112  Identities=12%  Similarity=0.110  Sum_probs=69.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      +.|||.|+|+ |.+|..++-.|+..+. .++.++++...........+..    ...+++.. | ...+..+.|+||.++
T Consensus         4 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~-~~~a~~~aDvVii~a   80 (318)
T 1ez4_A            4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G-EYSDCKDADLVVITA   80 (318)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C-CGGGGTTCSEEEECC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C-CHHHhCCCCEEEECC
Confidence            4589999998 9999999999998873 2889998743211111111111    12344443 2 233466899999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +...  ....+....+..|......+++.+.+...  .+|.+|-
T Consensus        81 g~~~--~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  122 (318)
T 1ez4_A           81 GAPQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN  122 (318)
T ss_dssp             CC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            7532  12233345668899999999998888764  6776654

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.47  E-value=0.0011  Score=52.72  Aligned_cols=68  Identities=18%  Similarity=0.206  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-------cCCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~d~vi  102 (346)
                      .+++|+|+| .|.+|+.+++.|.+. | ++|++++++.    +...... ..++..+.+|..+.+       ..++|.||
T Consensus        38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g-~~V~vid~~~----~~~~~~~-~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           38 GHAQVLILG-MGRIGTGAYDELRARYG-KISLGIEIRE----EAAQQHR-SEGRNVISGDATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TTCSEEEEC-CSHHHHHHHHHHHHHHC-SCEEEEESCH----HHHHHHH-HTTCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHhccC-CeEEEEECCH----HHHHHHH-HCCCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence            467999998 699999999999999 9 9999999853    2222221 235677778876532       34689999


Q ss_pred             Ecc
Q 019060          103 HLA  105 (346)
Q Consensus       103 ~~a  105 (346)
                      .+.
T Consensus       111 ~~~  113 (183)
T 3c85_A          111 LAM  113 (183)
T ss_dssp             ECC
T ss_pred             EeC
Confidence            865

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.46  E-value=0.00017  Score=61.22  Aligned_cols=93  Identities=19%  Similarity=0.361  Sum_probs=55.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEE-EeCCCCCC-cchhhhhcCC-CCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGS-KDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~-~~~~~~~~~~-~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +|||.|+|++|.+|+.+++.+.+....++++ ++|+.+.. .......... .++.. ..|+.+. ..++|+||++..  
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v-~~dl~~l-l~~~DVVIDfT~--   82 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL-TDDIERV-CAEADYLIDFTL--   82 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC-BCCHHHH-HHHCSEEEECSC--
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCcee-cCCHHHH-hcCCCEEEEcCC--
Confidence            5799999999999999999999876467665 46643211 1111111110 12211 1222221 125899999762  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILL  144 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~  144 (346)
                                      -..+...+..|.+.|+++|.
T Consensus        83 ----------------p~a~~~~~~~al~~G~~vVi  102 (272)
T 4f3y_A           83 ----------------PEGTLVHLDAALRHDVKLVI  102 (272)
T ss_dssp             ----------------HHHHHHHHHHHHHHTCEEEE
T ss_pred             ----------------HHHHHHHHHHHHHcCCCEEE
Confidence                            11345677788888988764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.42  E-value=0.00068  Score=59.03  Aligned_cols=112  Identities=13%  Similarity=0.013  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc---C-CCCeeEE-ecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI---G-HPRFELI-RHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~-~~d~~~~~~~~~d~vi~~  104 (346)
                      ..|||.|+|+ |.+|..++..|+..|. .+|++++++..........+.   . ....... ..|+.+  ..+.|+||-+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~--~~daDiVIit   96 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV--SAGSKLVVIT   96 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS--CSSCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH--hCCCCEEEEe
Confidence            3689999998 9999999999999983 389999874321111111110   0 1112222 345443  6689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ||...  ....+....+..|..-...+++.+.+.+.  .++.+|-
T Consensus        97 aG~p~--kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN  139 (330)
T 3ldh_A           97 AGARQ--QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE  139 (330)
T ss_dssp             CSCCC--CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCCC--CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence            98532  23344556678899989999988887753  6776664

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.38  E-value=0.00077  Score=58.86  Aligned_cols=113  Identities=13%  Similarity=0.123  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC---CC-CeeEE-ecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG---HP-RFELI-RHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~---~~-~~~~~-~~d~~~~~~~~~d~vi~~  104 (346)
                      ..|||.|+|+ |.+|..++..|+..|. .++++++++..........+..   .. ....+ ..|..  +..+.|+||.+
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~--~~~~aDiVvi~   94 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS--VTANSKLVIIT   94 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG--GGTTEEEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH--HhCCCCEEEEc
Confidence            3579999997 9999999999999883 3899998753211111111110   01 11222 33432  46689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecc
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTS  148 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~  148 (346)
                      ||...  ....+....++.|..-...+.+.+.+...  .++.+|-.
T Consensus        95 aG~~~--kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           95 AGARQ--QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNP  138 (331)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSS
T ss_pred             cCCCC--CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCh
Confidence            98532  33455667889999999999999888753  67777653

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.38  E-value=0.0027  Score=55.12  Aligned_cols=109  Identities=15%  Similarity=0.061  Sum_probs=69.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      |||.|+|+ |.+|..++..|...  + ++|++++++.............     ....++.. .|+.  +..++|+||-+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g-~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~--~l~~aDvViia   76 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLA-RELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYA--DTANSDIVIIT   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCC-SEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGG--GGTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCC-CEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHH--HHCCCCEEEEe
Confidence            68999998 99999999999985  6 8999999864322211101111     01222222 3442  25679999998


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++..  ..........+..|......+++.+.+...  .+|.+|-
T Consensus        77 v~~p--~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN  119 (310)
T 1guz_A           77 AGLP--RKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN  119 (310)
T ss_dssp             CSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred             CCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence            8632  122233456677888888889888877653  5666543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.34  E-value=0.00095  Score=57.84  Aligned_cols=108  Identities=17%  Similarity=0.147  Sum_probs=64.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCC----CCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGH----PRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |||.|+|+ |.+|..++..|...| +  +|++++++..............    ...++...|.  ....+.|+||.+++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g-~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~--~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRG-SCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGH--SELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECG--GGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCH--HHhCCCCEEEEcCC
Confidence            68999997 999999999999998 7  9999998532111111111110    1223332232  34568999999986


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ...  .........+..|+.....+++.+.+...  .+|.+|
T Consensus        77 ~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t  116 (304)
T 2v6b_A           77 ANQ--KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS  116 (304)
T ss_dssp             -------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred             CCC--CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            432  11223334567788888888888877643  555544

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.34  E-value=0.0015  Score=56.77  Aligned_cols=110  Identities=14%  Similarity=0.056  Sum_probs=73.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+|+ |.+|..++-.|+..+. .++.++++...........+..    ...+++...|  ..+..+.|+||.+++.
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~--~~a~~~aD~Vii~ag~   77 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGS--YGDLEGARAVVLAAGV   77 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECC--GGGGTTEEEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECC--HHHhCCCCEEEECCCC
Confidence            69999998 9999999999988764 5899998753211111111111    1233444332  3456689999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  ....+....+..|......+++.+.+.+.  .+|.+|-
T Consensus        78 ~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (310)
T 2xxj_A           78 AQ--RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN  117 (310)
T ss_dssp             CC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CC--CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            32  22334556778899999999998888753  6776654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.34  E-value=0.0013  Score=57.71  Aligned_cols=166  Identities=13%  Similarity=0.066  Sum_probs=97.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC------CeEEEEeCCCCCCc-ch-hhhh--cCCCCe-eEEecccCCcccCCCCE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK------NEVIVVDNYFTGSK-DN-LRKW--IGHPRF-ELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~------~~V~~~~r~~~~~~-~~-~~~~--~~~~~~-~~~~~d~~~~~~~~~d~  100 (346)
                      .-||.|+||+|.||+.|+-.|.....      .++.+++....... +. ...+  ...+.. ..+..+-....+.+.|+
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~adv  103 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAI  103 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCE
Confidence            35999999999999999998876542      16777776321110 00 1111  111221 22222222334668999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeccc---cc--CCCCCCCCCCCCcCCCCCCCC
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSE---VY--GDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~---v~--~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      ||-+||..  .....+....++.|..-.+.+.+.+.+..   ++++.+|-..   +|  -....           .-+.+
T Consensus       104 Vvi~aG~p--rkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~-----------g~~~~  170 (345)
T 4h7p_A          104 AIMCGAFP--RKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQ-----------GKLNP  170 (345)
T ss_dssp             EEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTT-----------TCSCG
T ss_pred             EEECCCCC--CCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHcc-----------CCCCc
Confidence            99999753  23456778889999999999999987753   3677777532   11  00000           01222


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ...-+.+....-++-...++..++...-+.-..|+|.+
T Consensus       171 r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~H  208 (345)
T 4h7p_A          171 RHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNH  208 (345)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCS
T ss_pred             ceeeeccchhHHHHHHHHHHHHCcChhheecceeecCC
Confidence            33444555555555555566667766666655666754

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.29  E-value=0.0012  Score=55.01  Aligned_cols=77  Identities=14%  Similarity=0.162  Sum_probs=50.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~~  112 (346)
                      |||+|+|++|.+|+.+++.+.+...+++.++....                    .|+.+....++|+||.+..+.    
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~--------------------~dl~~~~~~~~DvvIDfT~p~----   56 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG--------------------DPLSLLTDGNTEVVIDFTHPD----   56 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT--------------------CCTHHHHHTTCCEEEECSCTT----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC--------------------CCHHHHhccCCcEEEEccChH----
Confidence            68999999999999999999876328887654321                    011111112579999876332    


Q ss_pred             cccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                    .+...+..|.+.++++|.-++
T Consensus        57 --------------a~~~~~~~a~~~g~~~VigTT   77 (245)
T 1p9l_A           57 --------------VVMGNLEFLIDNGIHAVVGTT   77 (245)
T ss_dssp             --------------THHHHHHHHHHTTCEEEECCC
T ss_pred             --------------HHHHHHHHHHHcCCCEEEcCC
Confidence                          245667778888877654443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.28  E-value=0.0012  Score=57.81  Aligned_cols=111  Identities=13%  Similarity=0.043  Sum_probs=69.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhh------cC-CCCeeEEecccCCcccCCCCEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKW------IG-HPRFELIRHDVTEPLLIEVDQI  101 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~------~~-~~~~~~~~~d~~~~~~~~~d~v  101 (346)
                      ++.|||.|+|| |.+|..++..|...| + .|++++++...........      +. ..++.. ..|+. ....+.|+|
T Consensus         7 ~~~~kI~VIGa-G~vG~~lA~~la~~g-~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~~-ea~~~aDiV   82 (331)
T 1pzg_A            7 QRRKKVAMIGS-GMIGGTMGYLCALRE-LADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-EYSYE-AALTGADCV   82 (331)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-ECSHH-HHHTTCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-eCCHH-HHhCCCCEE
Confidence            34589999997 999999999999999 7 8999988643222111111      11 112221 13432 135679999


Q ss_pred             EEcccCCCcccccc-----ChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          102 YHLACPASPIFYKY-----NPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       102 i~~a~~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      |.+++....  ...     +.......|......+++.+.+...  .+|.+|
T Consensus        83 i~a~g~p~~--~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t  132 (331)
T 1pzg_A           83 IVTAGLTKV--PGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  132 (331)
T ss_dssp             EECCSCSSC--TTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EEccCCCCC--CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            999874321  111     3345567788888888888887653  455444

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.26  E-value=0.0034  Score=54.77  Aligned_cols=110  Identities=13%  Similarity=0.098  Sum_probs=68.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      .|||.|+|+ |.+|..++..|...| + .|++++++.............     ....++.. .|+  ....++|+||.+
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g-~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~--~al~~aD~Vi~a   79 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKN-LGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--DDLAGADVVIVT   79 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH--HHhCCCCEEEEe
Confidence            579999998 999999999999999 6 888888754222111111100     11223322 454  345689999999


Q ss_pred             ccCCCccccccC-----hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYN-----PVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~-----~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++...  .....     .......|......+.+.+.+...  .+|.+|-
T Consensus        80 ~g~p~--k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  127 (322)
T 1t2d_A           80 AGFTK--APGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN  127 (322)
T ss_dssp             CSCSS--CTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCCC--CCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            87432  11111     234466777788888887776643  5655543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.25  E-value=0.0026  Score=55.39  Aligned_cols=112  Identities=12%  Similarity=0.119  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhh---c--CCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW---I--GHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      +.|||.|+|+ |.+|..++..|+..+. .+|.+++++..........+   .  ....+++.. |. ..+..+.|+||.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~~-~~a~~~aDvVvi~   81 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-GE-YSDCHDADLVVIC   81 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-CC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-CC-HHHhCCCCEEEEC
Confidence            3579999998 9999999999998873 47888887431111111110   0  012333333 31 3346689999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++...  ....+....+..|......+.+.+.+...  .+|.+|-
T Consensus        82 ag~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           82 AGAAQ--KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             CCCCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence            97532  22344556778899999999988888754  5666543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.19  E-value=0.0011  Score=55.10  Aligned_cols=66  Identities=8%  Similarity=0.012  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc------cCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL------LIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~~~~d~vi~~  104 (346)
                      ..++|+|+|+ |.+|+.+++.|.+.| + |++++++.    +......  .++.++.+|.++.+      ..++|.||.+
T Consensus         8 ~~~~viI~G~-G~~G~~la~~L~~~g-~-v~vid~~~----~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            8 KSRHVVICGW-SESTLECLRELRGSE-V-FVLAEDEN----VRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             --CEEEEESC-CHHHHHHHHHSTTSE-E-EEEESCGG----GHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHhCC-e-EEEEECCH----HHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence            4679999996 999999999999999 8 99988743    2222222  46889999998764      2368999976


Q ss_pred             c
Q 019060          105 A  105 (346)
Q Consensus       105 a  105 (346)
                      .
T Consensus        79 ~   79 (234)
T 2aef_A           79 L   79 (234)
T ss_dssp             C
T ss_pred             C
Confidence            5

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.16  E-value=0.00065  Score=57.84  Aligned_cols=73  Identities=19%  Similarity=0.263  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++++|+|+ |.+|+.+++.|.+.| .+|++++|+..+. +.+.+.+.. ..+.  ..|+.+....++|+||++++..
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G-~~V~v~~R~~~~~-~~la~~~~~~~~~~--~~~~~~~~~~~~DivVn~t~~~  191 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLD-CAVTITNRTVSRA-EELAKLFAHTGSIQ--ALSMDELEGHEFDLIINATSSG  191 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSHHHH-HHHHHHTGGGSSEE--ECCSGGGTTCCCSEEEECCSCG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcC-CEEEEEECCHHHH-HHHHHHhhccCCee--EecHHHhccCCCCEEEECCCCC
Confidence            4689999998 679999999999999 9999999864221 222222111 1122  2232211103699999999754

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.14  E-value=0.0014  Score=55.88  Aligned_cols=97  Identities=15%  Similarity=0.240  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCC-CcchhhhhcC--CCCeeEEecccCCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTG-SKDNLRKWIG--HPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~-~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ++.+||.|.|++|.+|+.+++.+.+....++++. +|+.+. ..........  ..++.. ..|+.+ ...++|+||.+.
T Consensus        19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v-~~dl~~-ll~~aDVvIDFT   96 (288)
T 3ijp_A           19 PGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI-TDDPES-AFSNTEGILDFS   96 (288)
T ss_dssp             --CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC-BSCHHH-HTTSCSEEEECS
T ss_pred             cCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCcee-eCCHHH-HhcCCCEEEEcC
Confidence            3457999999999999999999987754676655 554321 1111111111  112222 223322 123699999876


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~S  146 (346)
                      .+                  ..+...+..|.+.|+.+|.-+
T Consensus        97 ~p------------------~a~~~~~~~~l~~Gv~vViGT  119 (288)
T 3ijp_A           97 QP------------------QASVLYANYAAQKSLIHIIGT  119 (288)
T ss_dssp             CH------------------HHHHHHHHHHHHHTCEEEECC
T ss_pred             CH------------------HHHHHHHHHHHHcCCCEEEEC
Confidence            21                  134556778888898877433

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.12  E-value=0.0047  Score=54.04  Aligned_cols=110  Identities=14%  Similarity=0.083  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcc---hhhhh---c-CCCCeeEEecccCCcccCCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKD---NLRKW---I-GHPRFELIRHDVTEPLLIEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~---~~~~~---~-~~~~~~~~~~d~~~~~~~~~d~vi  102 (346)
                      +.|||.|+|| |.+|..++..|...| + .|++++++......   .+...   . ...++.. ..|+  ....++|+||
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g-~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~d~--~al~~aD~VI   87 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKD-LGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-ENNY--EYLQNSDVVI   87 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ESCG--GGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CCCH--HHHCCCCEEE
Confidence            4579999997 999999999999999 7 89999886432221   11111   0 1112222 1444  3456899999


Q ss_pred             EcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          103 HLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       103 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      -+++...  ....+.......|......+++.+.+...  .+|.+|-
T Consensus        88 ~avg~p~--k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN  132 (328)
T 2hjr_A           88 ITAGVPR--KPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN  132 (328)
T ss_dssp             ECCSCCC--CTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             EcCCCCC--CCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9886432  11112223456788888888887776543  5555553

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.07  E-value=0.0012  Score=56.62  Aligned_cols=66  Identities=14%  Similarity=0.213  Sum_probs=44.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|+|.|+|+||.+|+.+++.|.+.| ++|++++|+..    ....... .++..  .+.. ....++|+||.+.
T Consensus        10 mmm~I~iIG~tG~mG~~la~~l~~~g-~~V~~~~r~~~----~~~~~~~-~g~~~--~~~~-~~~~~aDvVi~av   75 (286)
T 3c24_A           10 GPKTVAILGAGGKMGARITRKIHDSA-HHLAAIEIAPE----GRDRLQG-MGIPL--TDGD-GWIDEADVVVLAL   75 (286)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHSS-SEEEEECCSHH----HHHHHHH-TTCCC--CCSS-GGGGTCSEEEECS
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCHH----HHHHHHh-cCCCc--CCHH-HHhcCCCEEEEcC
Confidence            45799999999999999999999999 99999988532    2211111 12221  1211 1233689999866

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.06  E-value=0.003  Score=55.09  Aligned_cols=108  Identities=14%  Similarity=0.089  Sum_probs=67.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhh---cC-CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKW---IG-HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |+|.|+|+ |.+|..++..|+..| +  +|++++++...........   .. .....+...|  .....++|+||.+++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g-~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d--~~~~~~aDvViiav~   76 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKG-FAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD--YADLKGSDVVIVAAG   76 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC--GGGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCC-CCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC--HHHhCCCCEEEEccC
Confidence            68999997 999999999999999 8  9999998532111111000   00 0112222233  223457999999886


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ...  ............|......+++.+.+...  .+|.+|
T Consensus        77 ~~~--~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t  116 (319)
T 1a5z_A           77 VPQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (319)
T ss_dssp             CCC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            432  11223445667788888888888876543  555554

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.01  E-value=0.00075  Score=55.09  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=31.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|+|+||+|.+|+.+++.|++.| ++|++++|+.
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g-~~V~~~~r~~   34 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            689999999999999999999999 9999999853

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.00  E-value=0.0048  Score=53.73  Aligned_cols=110  Identities=14%  Similarity=0.038  Sum_probs=67.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhc-----CCCCeeEEe-cccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWI-----GHPRFELIR-HDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~-~d~~~~~~~~~d~vi~~  104 (346)
                      .|+|.|+|+ |.+|..++..|...| + +|++++++............     .....++.. .|+  ....++|+||-+
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g-~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~--~a~~~aDiVi~a   79 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDN-LADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY--ADISGSDVVIIT   79 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH--HHhCCCCEEEEe
Confidence            579999997 999999999999999 7 89999986432221100000     001112222 343  345579999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ++...  ............|......+++.+.+...  .+|.+|.
T Consensus        80 vg~p~--~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           80 ASIPG--RPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             CCCSS--CCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCCCC--CCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            87432  11222233455677777777777766543  5665554

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.91  E-value=0.0043  Score=53.96  Aligned_cols=111  Identities=15%  Similarity=0.205  Sum_probs=69.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .|||.|+|+ |.+|..++..|...+. .+|++++++..........+..     ...+++...+  ..+..++|+||.++
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--~~al~~aDvViia~   82 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD--YDDCRDADLVVICA   82 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC--GGGTTTCSEEEECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCc--HHHhCCCCEEEEcC
Confidence            579999998 9999999999988873 4899999853211111111111     1133433322  23456899999998


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      +.....  ..+....+..|......+++.+.+...  .++.+|-
T Consensus        83 ~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN  124 (316)
T 1ldn_A           83 GANQKP--GETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATN  124 (316)
T ss_dssp             SCCCCT--TTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             CCCCCC--CCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence            754321  223344567788888888888877653  4555543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.91  E-value=0.0081  Score=52.27  Aligned_cols=103  Identities=16%  Similarity=0.124  Sum_probs=65.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcc-hh--hhhcC-CCCeeEEec-ccCCcccCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKD-NL--RKWIG-HPRFELIRH-DVTEPLLIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~-~~--~~~~~-~~~~~~~~~-d~~~~~~~~~d~vi~~  104 (346)
                      .|+|.|+|+ |.+|..++..|...| +  +|++++|+...... ..  ..... .....+... |.  ....++|+||.+
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g-~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~aD~Vii~   82 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRG-IAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP--EICRDADMVVIT   82 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG--GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH--HHhCCCCEEEEC
Confidence            479999997 999999999999999 7  99999985321110 11  11000 012222222 22  234579999998


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (346)
                      ++...  ....+....+..|......+++.+.+.+.
T Consensus        83 v~~~~--~~g~~r~~~~~~n~~~~~~~~~~i~~~~~  116 (319)
T 1lld_A           83 AGPRQ--KPGQSRLELVGATVNILKAIMPNLVKVAP  116 (319)
T ss_dssp             CCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             CCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            86432  22244556677888888888887776543

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.86  E-value=0.00087  Score=58.73  Aligned_cols=35  Identities=14%  Similarity=0.059  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+++|||+||+|.||..+++.+...| .+|++++|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~V~~~~~~  174 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGT  174 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCC
Confidence            46899999999999999999999999 899999875

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.81  E-value=0.021  Score=49.17  Aligned_cols=107  Identities=14%  Similarity=0.139  Sum_probs=71.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ++||.|+|| |.+|..++..|+..| .  +|++++++.. .......+  ...+++... .|+  .+..++|+||-++|.
T Consensus        14 ~~kV~ViGa-G~vG~~~a~~l~~~g-~~~ev~L~Di~~~-~~g~a~dl~~~~~~~i~~t-~d~--~~l~~aD~Vi~aag~   87 (303)
T 2i6t_A           14 VNKITVVGG-GELGIACTLAISAKG-IADRLVLLDLSEG-TKGATMDLEIFNLPNVEIS-KDL--SASAHSKVVIFTVNS   87 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHT-CCSEEEEECCC------CHHHHHHHTCTTEEEE-SCG--GGGTTCSEEEECCCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcC-CCCEEEEEcCCcc-hHHHHHHHhhhcCCCeEEe-CCH--HHHCCCCEEEEcCCC
Confidence            479999995 999999999999999 7  8999998653 22111111  222344442 454  345689999999986


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..   ...+....+..|......+++.+.+...  .+|.+|-
T Consensus        88 ~~---pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN  126 (303)
T 2i6t_A           88 LG---SSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ  126 (303)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            32   2345566778898888999988887643  5666664

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.78  E-value=0.012  Score=50.94  Aligned_cols=108  Identities=10%  Similarity=0.060  Sum_probs=72.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcC-----CCCeeEEe-cccCCcccCCCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIG-----HPRFELIR-HDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~-~d~~~~~~~~~d~vi~~a~  106 (346)
                      ||.|+|+ |.+|..++..|+..+ . +|++++++..........+..     ....++.. .|.  .+..+.|+||..++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~-l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--~a~~~aD~Vi~~ag   76 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRG-YDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--EDMRGSDIVLVTAG   76 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHT-CSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--GGGTTCSEEEECCS
T ss_pred             CEEEECc-CHHHHHHHHHHHhCC-CCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--HHhCCCCEEEEeCC
Confidence            5899998 999999999998888 5 699999864222211111111     11333433 454  35668999999987


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ...  ....+.......|..-...+++.+.+...  .+|.+|-
T Consensus        77 ~~~--k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           77 IGR--KPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             CCC--CSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCC--CCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence            532  22345566778899999999998887643  6776654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.77  E-value=0.00053  Score=52.28  Aligned_cols=72  Identities=15%  Similarity=0.239  Sum_probs=45.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++|+|+|+ |.+|+.+++.|.+.| ++|++++|+.... +.+.+.+   +......+-......++|+||.+.+..
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g-~~v~v~~r~~~~~-~~~a~~~---~~~~~~~~~~~~~~~~~Divi~at~~~   91 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQ-YKVTVAGRNIDHV-RAFAEKY---EYEYVLINDIDSLIKNNDVIITATSSK   91 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTT-CEEEEEESCHHHH-HHHHHHH---TCEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEcCCHHHH-HHHHHHh---CCceEeecCHHHHhcCCCEEEEeCCCC
Confidence            3789999995 999999999999988 7899998854221 1222222   123222221112223689999987543

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=96.77  E-value=0.0013  Score=57.83  Aligned_cols=36  Identities=19%  Similarity=0.086  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|||+||+|.||..+++.+...| .+|++++|+.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-~~Vi~~~~~~  180 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLG-ATVIGTVSTE  180 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            46899999999999999999999999 8999998853

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=96.77  E-value=0.0022  Score=52.43  Aligned_cols=65  Identities=12%  Similarity=0.136  Sum_probs=43.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+|+|.|+| +|.+|+.+++.|.+.| ++|++++|+.    +....... .++...  ++.+ ...++|+||.+.
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g-~~V~~~~r~~----~~~~~~~~-~g~~~~--~~~~-~~~~~DvVi~av   91 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSG-FKVVVGSRNP----KRTARLFP-SAAQVT--FQEE-AVSSPEVIFVAV   91 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESSH----HHHHHHSB-TTSEEE--EHHH-HTTSCSEEEECS
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCC-CEEEEEeCCH----HHHHHHHH-cCCcee--cHHH-HHhCCCEEEECC
Confidence            357999999 8999999999999999 9999998853    22222221 244433  2222 234689999876

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.75  E-value=0.0023  Score=54.45  Aligned_cols=73  Identities=12%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCC-CCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGH-PRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++++|+|+ |.+|+.++..|.+.| .+|++++|+..+. +.+.+.+.. ..+..  .|+.+....++|+||++++..
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G-~~v~v~~R~~~~a-~~l~~~~~~~~~~~~--~~~~~~~~~~~DivIn~t~~~  191 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQ-QNIVLANRTFSKT-KELAERFQPYGNIQA--VSMDSIPLQTYDLVINATSAG  191 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTT-CEEEEEESSHHHH-HHHHHHHGGGSCEEE--EEGGGCCCSCCSEEEECCCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHHHccccCCeEE--eeHHHhccCCCCEEEECCCCC
Confidence            4689999997 779999999999999 9999999964221 222221111 12222  232221113699999998653

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.75  E-value=0.0011  Score=58.81  Aligned_cols=93  Identities=15%  Similarity=0.107  Sum_probs=51.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-cCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-LIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~d~vi~~a~~~  108 (346)
                      |||.|.||||++|+.|++.|+.+..+   +++.+...+...  .... +....+.+...  .++. ..++|+||.+.+. 
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~--~v~~-~~g~~i~~~~~--~~~~~~~~~DvVf~a~g~-   75 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ--AAPS-FGGTTGTLQDA--FDLEALKALDIIVTCQGG-   75 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS--BCCG-GGTCCCBCEET--TCHHHHHTCSEEEECSCH-
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC--Cccc-cCCCceEEEec--CChHHhcCCCEEEECCCc-
Confidence            69999999999999999955554323   445554422211  1111 11112333332  2221 2379999988742 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                       ......+..+.+.|++.+.++-.
T Consensus        76 -----------------~~s~~~a~~~~~~G~k~vVID~s   98 (367)
T 1t4b_A           76 -----------------DYTNEIYPKLRESGWQGYWIDAA   98 (367)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCCEEEECS
T ss_pred             -----------------hhHHHHHHHHHHCCCCEEEEcCC
Confidence                             13445666667778744444433

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.73  E-value=0.0041  Score=52.12  Aligned_cols=100  Identities=13%  Similarity=0.150  Sum_probs=60.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------------------CcchhhhhcC--CC--CeeEEecc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------------SKDNLRKWIG--HP--RFELIRHD   89 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------------------~~~~~~~~~~--~~--~~~~~~~d   89 (346)
                      +++|+|+| .|.+|+.+++.|.+.|..+++++++..-.                  +.+.+.+.+.  .+  .+..+..+
T Consensus        31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            57999999 58899999999999995589999886411                  1111111111  12  24444544


Q ss_pred             cCCc----ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060           90 VTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus        90 ~~~~----~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                      +.+.    ...++|+||.+...                 ...-..+.++|++.++.+|..+...
T Consensus       110 ~~~~~~~~~~~~~DvVi~~~d~-----------------~~~~~~l~~~~~~~~~p~i~~~~~g  156 (249)
T 1jw9_B          110 LDDAELAALIAEHDLVLDCTDN-----------------VAVRNQLNAGCFAAKVPLVSGAAIR  156 (249)
T ss_dssp             CCHHHHHHHHHTSSEEEECCSS-----------------HHHHHHHHHHHHHHTCCEEEEEEEB
T ss_pred             CCHhHHHHHHhCCCEEEEeCCC-----------------HHHHHHHHHHHHHcCCCEEEeeecc
Confidence            5432    12369999987521                 1122345677788787787766543

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.67  E-value=0.0076  Score=50.10  Aligned_cols=59  Identities=15%  Similarity=0.288  Sum_probs=40.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEE-EeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      +|||.|+|+ |.+|+.+++.+.+.+ +++++ ++|....          ..++.. ..|+.+..  ++|+||+++
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~-~eLva~~d~~~~~----------~~gv~v-~~dl~~l~--~~DVvIDft   62 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKG-HEIVGVIENTPKA----------TTPYQQ-YQHIADVK--GADVAIDFS   62 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEECSSCC------------CCSCB-CSCTTTCT--TCSEEEECS
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCC-CEEEEEEecCccc----------cCCCce-eCCHHHHh--CCCEEEEeC
Confidence            589999999 999999999999998 57665 4553321          012221 23333322  799999887

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=96.66  E-value=0.0039  Score=55.17  Aligned_cols=69  Identities=20%  Similarity=0.184  Sum_probs=38.7

Q ss_pred             CEEEEEcCchhHHHHHHH-HHHhcCC--CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVD-KLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~-~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a~  106 (346)
                      |+|.|.||||++|+.|++ .|.++..  .++..+..++..  ..+..+.. ....+.  +..+. ...++|+||.+.+
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~~~-~~~~~~--~~~~~~~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNFGK-DAGMLH--DAFDIESLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCCSSS-CCCBCE--ETTCHHHHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC--cCHHHhCC-CceEEE--ecCChhHhccCCEEEECCC
Confidence            689999999999999999 5555541  255555332111  11111111 122222  22221 2347999998874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.66  E-value=0.0039  Score=56.36  Aligned_cols=67  Identities=18%  Similarity=0.252  Sum_probs=51.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a  105 (346)
                      +|+|+|+|. |-+|+.+++.|.+.| +.|++++++.    +...... ..++..+.+|.++.+.      .++|+||-+.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g-~~vvvId~d~----~~v~~~~-~~g~~vi~GDat~~~~L~~agi~~A~~viv~~   76 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSG-VKMVVLDHDP----DHIETLR-KFGMKVFYGDATRMDLLESAGAAKAEVLINAI   76 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCH----HHHHHHH-HTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCC-CCEEEEECCH----HHHHHHH-hCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence            578999995 999999999999999 9999999743    2222222 2467889999998743      2689998765

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.64  E-value=0.018  Score=50.96  Aligned_cols=169  Identities=12%  Similarity=0.029  Sum_probs=92.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCC-e---EEEEeCCCCCCcc----hhhhhcCC--CCeeEEe-cccCCcccCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKN-E---VIVVDNYFTGSKD----NLRKWIGH--PRFELIR-HDVTEPLLIEV   98 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~-~---V~~~~r~~~~~~~----~~~~~~~~--~~~~~~~-~d~~~~~~~~~   98 (346)
                      ...+||.|+||+|.||.+++-.|+..+.. +   +.+.+-..+...+    ....+...  +-..-+. .+-....+.+.
T Consensus        30 ~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~da  109 (375)
T 7mdh_A           30 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV  109 (375)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCC
Confidence            34579999999999999999999887632 2   5554332212111    11111111  1111111 11112345579


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-C--CeEEEEeccc---ccCCCCCCCCCCCCcCCCCCCCC
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-G--ARILLTSTSE---VYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~--~r~i~~SS~~---v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      |+||-+||..  .....+....++.|..-.+.+...+.+. +  +.++.+|-..   +|--.     ...     .-..+
T Consensus       110 DvVVitag~p--rkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~-----k~s-----g~~~~  177 (375)
T 7mdh_A          110 DWALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICL-----KNA-----PDIPA  177 (375)
T ss_dssp             SEEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH-----HTC-----TTSCG
T ss_pred             CEEEEcCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHH-----HHc-----CCCCc
Confidence            9999998753  2344567788899999999999988875 3  4777777542   11000     000     00111


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCC
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR  210 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~  210 (346)
                      ...-+.+.+..-++-...++..++...-++-..|+|.+
T Consensus       178 rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeH  215 (375)
T 7mdh_A          178 KNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNH  215 (375)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCS
T ss_pred             cEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecC
Confidence            12233344445555555566666655445433567754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.64  E-value=0.011  Score=51.30  Aligned_cols=110  Identities=13%  Similarity=0.071  Sum_probs=65.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc------CCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|.|+| .|.+|..++..|.+.|. ++|++++|+..... .....+      ....++....|.  ....++|+||.++
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~d~--~~~~~aDvViiav   77 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVK-ADQIDFQDAMANLEAHGNIVINDW--AALADADVVISTL   77 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH-HHHHHHHHHGGGSSSCCEEEESCG--GGGTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHH-HHHHHHHhhhhhcCCCeEEEeCCH--HHhCCCCEEEEec
Confidence            7999999 89999999999999884 68999998532111 111100      011234333454  3445799999988


Q ss_pred             cCCCccc--cccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          106 CPASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       106 ~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      +......  ...........|+.....+++.+.+...  .+|.+|
T Consensus        78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t  122 (309)
T 1hyh_A           78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (309)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence            5422000  1112223456777778888888776543  455444

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=96.61  E-value=0.0034  Score=55.02  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+++|||+||+|.||..+++.+...| .+|++++|+.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~  180 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSD  180 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            346899999999999999999999999 8999998743

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=96.61  E-value=0.0039  Score=55.21  Aligned_cols=36  Identities=11%  Similarity=0.092  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|||+||+|.||..+++.+...| .+|++++|+.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~Vi~~~~~~  197 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAG-AIPLVTAGSQ  197 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            46899999999999999999999999 8999998753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.60  E-value=0.001  Score=61.14  Aligned_cols=67  Identities=24%  Similarity=0.523  Sum_probs=51.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~  104 (346)
                      .|+|+|.| .|-+|++|++.|.+.| |.|++++++    ++.+......-++..+.+|-++++.+      ++|.+|-+
T Consensus         3 ~M~iiI~G-~G~vG~~la~~L~~~~-~~v~vId~d----~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~   75 (461)
T 4g65_A            3 AMKIIILG-AGQVGGTLAENLVGEN-NDITIVDKD----GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV   75 (461)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHTCSTT-EEEEEEESC----HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred             cCEEEEEC-CCHHHHHHHHHHHHCC-CCEEEEECC----HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence            58999999 5999999999999999 999999873    33333333233688899999987543      59988854

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=96.60  E-value=0.003  Score=55.65  Aligned_cols=36  Identities=11%  Similarity=-0.006  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|||+|++|.+|..+++.+...| .+|++++|+.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G-~~Vi~~~~~~  201 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFG-ARVIATAGSE  201 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            46899999999999999999999999 8999998753

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=96.56  E-value=0.0027  Score=55.96  Aligned_cols=36  Identities=31%  Similarity=0.314  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+||+|.||...++.+...| .+|++++++.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~G-a~Vi~~~~~~  194 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMG-AKVIAVVNRT  194 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSG
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            46899999999999999999999999 8999998854

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=96.54  E-value=0.0054  Score=53.81  Aligned_cols=37  Identities=22%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|||+||+|.+|...++.+...| .+|++++++.
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  183 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKG-AHTIAVASTD  183 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            357899999999999999999999999 8999998743

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.53  E-value=0.0071  Score=49.50  Aligned_cols=69  Identities=20%  Similarity=0.337  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      .+++|||+| .|-+|...++.|++.| ..|++++..   ..+.+..+....++.++..++......++|.||-+
T Consensus        30 ~gk~VLVVG-gG~va~~ka~~Ll~~G-A~VtVvap~---~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaA   98 (223)
T 3dfz_A           30 KGRSVLVVG-GGTIATRRIKGFLQEG-AAITVVAPT---VSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVA   98 (223)
T ss_dssp             TTCCEEEEC-CSHHHHHHHHHHGGGC-CCEEEECSS---CCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEECCC---CCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEEC
Confidence            478999999 5899999999999999 999999863   22334444445578888888777777789999843

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=96.53  E-value=0.005  Score=54.23  Aligned_cols=36  Identities=11%  Similarity=0.076  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+++|||+||+|.||..+++.+...| .+|++++|+
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-~~V~~~~~~  189 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMG-CYVVGSAGS  189 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCC
Confidence            346899999999999999999999999 899999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=96.52  E-value=0.0056  Score=54.01  Aligned_cols=37  Identities=22%  Similarity=0.203  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+++|||+|++|.||..+++.+...| .+|++++|+.
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~  204 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGE  204 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECST
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCH
Confidence            356899999999999999999999999 8999998854

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.50  E-value=0.021  Score=51.88  Aligned_cols=89  Identities=18%  Similarity=0.241  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc--------ccCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------LLIEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------~~~~~d   99 (346)
                      ..++|+|+| .|.||+.+++.|.++...   .|++.+......  .+.+..   ++++...++++.        ...+.|
T Consensus        12 ~~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~--~~~~~~---g~~~~~~~Vdadnv~~~l~aLl~~~D   85 (480)
T 2ph5_A           12 FKNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV--DVAQQY---GVSFKLQQITPQNYLEVIGSTLEEND   85 (480)
T ss_dssp             CCSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC--CHHHHH---TCEEEECCCCTTTHHHHTGGGCCTTC
T ss_pred             CCCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh--hHHhhc---CCceeEEeccchhHHHHHHHHhcCCC
Confidence            467999999 999999999999998644   688887654332  222222   345554444322        112359


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                      +|||++-+.                  ....++++|.+.|+.+|
T Consensus        86 vVIN~s~~~------------------~~l~Im~acleaGv~Yl  111 (480)
T 2ph5_A           86 FLIDVSIGI------------------SSLALIILCNQKGALYI  111 (480)
T ss_dssp             EEEECCSSS------------------CHHHHHHHHHHHTCEEE
T ss_pred             EEEECCccc------------------cCHHHHHHHHHcCCCEE
Confidence            999866322                  24578999999987765

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=96.50  E-value=0.0051  Score=54.55  Aligned_cols=71  Identities=20%  Similarity=0.171  Sum_probs=39.7

Q ss_pred             CCCEEEEEcCchhHHHHHHH-HHHhcCC--CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVD-KLMENEK--NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~-~L~~~g~--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a~  106 (346)
                      ..|+|.|.||||++|+.|++ .|.++..  .++..+..+.  ....+..+.. ....+.  +..+. ...++|+||.+.+
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~--aG~~~~~~~~-~~~~v~--~~~~~~~~~~vDvvf~a~~   77 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN--AGGKAPSFAK-NETTLK--DATSIDDLKKCDVIITCQG   77 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC--TTSBCCTTCC-SCCBCE--ETTCHHHHHTCSEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh--cCCCHHHcCC-CceEEE--eCCChhHhcCCCEEEECCC
Confidence            35899999999999999999 5555541  2455553322  1111111211 112222  22222 2347999998874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=96.49  E-value=0.0026  Score=56.55  Aligned_cols=36  Identities=22%  Similarity=0.208  Sum_probs=32.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+||+|.+|..+++.+...| .+|++++++
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~G-a~Vi~~~~~  197 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAK-CHVIGTCSS  197 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTT-CEEEEEESS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCC-CEEEEEECC
Confidence            357899999999999999999999999 899999874

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.45  E-value=0.0017  Score=53.34  Aligned_cols=67  Identities=15%  Similarity=0.155  Sum_probs=43.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEE-EeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ++|+|.|+| +|.+|..+++.|.+.| ++|++ .+|+... .+.+.+..   ++.....+ . ....++|+||.+.
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g-~~V~~v~~r~~~~-~~~l~~~~---g~~~~~~~-~-~~~~~aDvVilav   89 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQ-IPAIIANSRGPAS-LSSVTDRF---GASVKAVE-L-KDALQADVVILAV   89 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTT-CCEEEECTTCGGG-GHHHHHHH---TTTEEECC-H-HHHTTSSEEEEES
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCC-CEEEEEECCCHHH-HHHHHHHh---CCCcccCh-H-HHHhcCCEEEEeC
Confidence            357999999 8999999999999999 89988 7775322 22222211   12222211 1 1234689999765

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.41  E-value=0.0021  Score=60.07  Aligned_cols=73  Identities=15%  Similarity=0.166  Sum_probs=43.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++++|+|| |.+|+.++..|.+.| .+|++++|+.... +.+...+.. .+..+ .|+.+.....+|++||+++..
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G-~~V~i~~R~~~~a-~~la~~~~~-~~~~~-~dl~~~~~~~~DilVN~agvg  435 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKG-AKVVIANRTYERA-LELAEAIGG-KALSL-TDLDNYHPEDGMVLANTTSMG  435 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHC-C-CEEEESSHHHH-HHHHHHTTC--CEET-TTTTTC--CCSEEEEECSSTT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHHHcCC-ceeeH-HHhhhccccCceEEEECCCCC
Confidence            3578999998 799999999999999 7999999854221 222222211 11111 132221122489999999864

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.40  E-value=0.0067  Score=51.42  Aligned_cols=72  Identities=17%  Similarity=0.219  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++++|+|+ |.+|+.++..|.+.|..+|++++|+..+ .+.+.+.+....+....  +.+....++|+||++..
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~-a~~la~~~~~~~~~~~~--~~~l~~~~~DivInaTp  190 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAK-ALALRNELDHSRLRISR--YEALEGQSFDIVVNATS  190 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHH-HHHHHHHHCCTTEEEEC--SGGGTTCCCSEEEECSS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhccCCeeEee--HHHhcccCCCEEEECCC
Confidence            4689999996 7899999999999994489999986422 22222222211233332  22222256999999764

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=96.39  E-value=0.0043  Score=55.00  Aligned_cols=36  Identities=19%  Similarity=0.092  Sum_probs=32.4

Q ss_pred             CCC--CEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCC
Q 019060           30 QSN--MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY   66 (346)
Q Consensus        30 ~~~--~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~   66 (346)
                      ..+  ++|||+||+|.||..+++.+...| . +|++++++
T Consensus       157 ~~g~~~~vlI~GasggiG~~~~~~a~~~G-a~~Vi~~~~~  195 (357)
T 2zb4_A          157 TAGSNKTMVVSGAAGACGSVAGQIGHFLG-CSRVVGICGT  195 (357)
T ss_dssp             CTTSCCEEEESSTTBHHHHHHHHHHHHTT-CSEEEEEESC
T ss_pred             CCCCccEEEEECCCcHHHHHHHHHHHHCC-CCeEEEEeCC
Confidence            346  899999999999999999999999 7 99999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.38  E-value=0.0098  Score=51.66  Aligned_cols=69  Identities=14%  Similarity=0.156  Sum_probs=44.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC--eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN--EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      +.|+|.|+| .|.+|..+++.|.+.| +  +|++++|+..    ..........+.....|+.+....++|+||.+.
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G-~~~~V~~~dr~~~----~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilav  102 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSG-FKGKIYGYDINPE----SISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS  102 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTT-CCSEEEEECSCHH----HHHHHHHTTSCSEEESCTTGGGGGCCSEEEECS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCC-CCCEEEEEECCHH----HHHHHHHCCCcchhcCCHHHHhhccCCEEEEeC
Confidence            458999999 8999999999999999 8  9999988532    222211111111122233221244699999875

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=96.38  E-value=0.0032  Score=55.25  Aligned_cols=95  Identities=14%  Similarity=0.160  Sum_probs=54.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      +.||.|.||||++|+.|++.|.++...++..+.... .....+.+   ++. .++.+...|..+. ..++|+||.+++..
T Consensus        13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~-~aG~~~~~~~p~~~-~~l~~~~~~~~~~-~~~~Dvvf~alp~~   89 (351)
T 1vkn_A           13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT-YAGKKLEEIFPSTL-ENSILSEFDPEKV-SKNCDVLFTALPAG   89 (351)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST-TTTSBHHHHCGGGC-CCCBCBCCCHHHH-HHHCSEEEECCSTT
T ss_pred             eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcc-cccCChHHhChhhc-cCceEEeCCHHHh-hcCCCEEEECCCcH
Confidence            358999999999999999999998745666664321 11122221   111 2222222221111 13589999876321


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                        ....++..+  .|+++|=.||.+
T Consensus        90 ------------------~s~~~~~~~--~g~~VIDlSsdf  110 (351)
T 1vkn_A           90 ------------------ASYDLVREL--KGVKIIDLGADF  110 (351)
T ss_dssp             ------------------HHHHHHTTC--CSCEEEESSSTT
T ss_pred             ------------------HHHHHHHHh--CCCEEEECChhh
Confidence                              122333333  567888777764

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.36  E-value=0.011  Score=54.05  Aligned_cols=34  Identities=24%  Similarity=0.324  Sum_probs=31.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|+|.|+| .|++|..++..|.+.| ++|++++|+.
T Consensus         2 ~mkI~VIG-~G~vG~~lA~~La~~G-~~V~~~D~~~   35 (450)
T 3gg2_A            2 SLDIAVVG-IGYVGLVSATCFAELG-ANVRCIDTDR   35 (450)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhcC-CEEEEEECCH
Confidence            48999998 6999999999999999 9999999853

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.33  E-value=0.0059  Score=52.03  Aligned_cols=72  Identities=14%  Similarity=0.235  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+++++|+|+ |.+|+.++..|.+.|..+|++++|+..+. +.+.+.+. ...+....  +.+.. .++|+||++...
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a-~~la~~~~~~~~~~~~~--~~~l~-~~aDiIInaTp~  197 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA-EQLAELVAAYGEVKAQA--FEQLK-QSYDVIINSTSA  197 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH-HHHHHHHGGGSCEEEEE--GGGCC-SCEEEEEECSCC
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH-HHHHHHhhccCCeeEee--HHHhc-CCCCEEEEcCcC
Confidence            4689999996 78999999999999944899999964222 22222111 11233332  22222 468999997643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=96.31  E-value=0.007  Score=53.08  Aligned_cols=37  Identities=16%  Similarity=0.192  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+++|||+||+|.||..+++.+...| .+|++++|+.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  184 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKG-CRVVGIAGGA  184 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            457899999999999999999999999 8999998753

>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*

Probab=96.28  E-value=0.024  Score=49.35  Aligned_cols=31  Identities=19%  Similarity=0.432  Sum_probs=25.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEe
Q 019060           33 MRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVD   64 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~   64 (346)
                      +||.|.|+ |+||+.+++.|.++  ...+|+++.
T Consensus         2 ikVgInG~-G~IGr~llR~l~~~~~p~~eivaIn   34 (337)
T 1rm4_O            2 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVIN   34 (337)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred             eEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEEE
Confidence            58999999 99999999999987  434666554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=96.25  E-value=0.0065  Score=53.70  Aligned_cols=36  Identities=14%  Similarity=0.127  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|||+||+|.+|..+++.+...| .+|++++|+.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~G-a~Vi~~~~~~  205 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYG-LKILGTAGTE  205 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCC-CEEEEEeCCh
Confidence            46899999999999999999999999 8999998753

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.25  E-value=0.0033  Score=54.16  Aligned_cols=76  Identities=18%  Similarity=0.151  Sum_probs=46.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .+++|+|+|+ |.+|+.++..|.+.|..+|++++|+..+ .+.+.+.+....-..+..+-......++|+||++.+..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k-a~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK-AERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH-HHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH-HHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCC
Confidence            4689999996 7799999999999993399999985422 12222222110001221111111234699999998643

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.25  E-value=0.011  Score=50.98  Aligned_cols=68  Identities=12%  Similarity=0.045  Sum_probs=44.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+.|+|.|+| .|.+|..+++.|.+.| ++|++++|+.    +....... .+......|+.+ ...++|+||-+.
T Consensus         5 ~~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~dr~~----~~~~~~~~-~g~~~~~~~~~e-~~~~aDvvi~~v   72 (303)
T 3g0o_A            5 GTDFHVGIVG-LGSMGMGAARSCLRAG-LSTWGADLNP----QACANLLA-EGACGAAASARE-FAGVVDALVILV   72 (303)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHH-TTCSEEESSSTT-TTTTCSEEEECC
T ss_pred             CCCCeEEEEC-CCHHHHHHHHHHHHCC-CeEEEEECCH----HHHHHHHH-cCCccccCCHHH-HHhcCCEEEEEC
Confidence            3468999997 8999999999999999 9999999853    22222211 122221222222 233689998765

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.25  E-value=0.0039  Score=54.02  Aligned_cols=35  Identities=9%  Similarity=0.168  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .++++||+|+ |.+|+.++..|.+.|..+|++++|+
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~  187 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRK  187 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECC
Confidence            4689999996 8999999999999993389999996

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=96.23  E-value=0.0036  Score=55.75  Aligned_cols=69  Identities=14%  Similarity=0.215  Sum_probs=45.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-----cCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~vi~~a~  106 (346)
                      .++|+|+|+ |.||+.+++.|...| .+|++++|+.... +...+.... .   +.+|..+..     ..++|+||++++
T Consensus       166 ~~~V~ViGa-G~iG~~~a~~l~~~G-a~V~~~d~~~~~~-~~~~~~~g~-~---~~~~~~~~~~l~~~~~~~DvVi~~~g  238 (369)
T 2eez_A          166 PASVVILGG-GTVGTNAAKIALGMG-AQVTILDVNHKRL-QYLDDVFGG-R---VITLTATEANIKKSVQHADLLIGAVL  238 (369)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHHH-HHHHHHTTT-S---EEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEECCHHHH-HHHHHhcCc-e---EEEecCCHHHHHHHHhCCCEEEECCC
Confidence            589999998 999999999999999 8999999853211 112221211 1   222322221     226999999986


Q ss_pred             C
Q 019060          107 P  107 (346)
Q Consensus       107 ~  107 (346)
                      .
T Consensus       239 ~  239 (369)
T 2eez_A          239 V  239 (369)
T ss_dssp             -
T ss_pred             C
Confidence            4

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.20  E-value=0.0048  Score=53.25  Aligned_cols=36  Identities=19%  Similarity=0.320  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ++++|.|+||.|.+|..++..|.+.| ++|++++|+.
T Consensus        20 ~~~~I~iIGg~G~mG~~la~~l~~~G-~~V~~~~~~~   55 (298)
T 2pv7_A           20 DIHKIVIVGGYGKLGGLFARYLRASG-YPISILDRED   55 (298)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHhCC-CeEEEEECCc
Confidence            45789999999999999999999999 9999998753

>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1

Probab=96.18  E-value=0.014  Score=51.04  Aligned_cols=34  Identities=18%  Similarity=0.407  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      |++||.|.|. |.||+.+++.|.++...+|+++.-
T Consensus         2 M~ikVgI~G~-G~iGr~~~R~l~~~~~vevvaI~d   35 (335)
T 1u8f_O            2 GKVKVGVNGF-GRIGRLVTRAAFNSGKVDIVAIND   35 (335)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             CceEEEEEcc-CHHHHHHHHHHHcCCCcEEEEecC
Confidence            3469999996 999999999999876467776653

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.18  E-value=0.022  Score=47.68  Aligned_cols=34  Identities=18%  Similarity=0.286  Sum_probs=29.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      +.+|+|+|+ |.+|+++++.|...|..+++++++.
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            579999996 5599999999999996688888664

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.18  E-value=0.016  Score=48.86  Aligned_cols=65  Identities=17%  Similarity=0.190  Sum_probs=45.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +++++|+|+ |..|+.++..|.+.| .+|++++|+..+.. .+.+ +.   +...  ++.+..  ++|+||++...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G-~~v~V~nRt~~ka~-~la~-~~---~~~~--~~~~l~--~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQG-LQVSVLNRSSRGLD-FFQR-LG---CDCF--MEPPKS--AFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCTTHH-HHHH-HT---CEEE--SSCCSS--CCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCHHHHH-HHHH-CC---CeEe--cHHHhc--cCCEEEEcccC
Confidence            689999995 999999999999999 99999999754322 2222 11   2322  222222  79999998643

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.12  E-value=0.0038  Score=53.56  Aligned_cols=74  Identities=16%  Similarity=0.179  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCC---CeeEEecccC--CcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP---RFELIRHDVT--EPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~d~~--~~~~~~~d~vi~~a  105 (346)
                      .+++++|+|++ .+|+.+++.|.+.|  +|++++|+.... +.+.+.+...   .. .+.+|+.  .....++|+||+++
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G--~V~v~~r~~~~~-~~l~~~~~~~~~~~~-~~~~d~~~~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN--NIIIANRTVEKA-EALAKEIAEKLNKKF-GEEVKFSGLDVDLDGVDIIINAT  201 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS--EEEEECSSHHHH-HHHHHHHHHHHTCCH-HHHEEEECTTCCCTTCCEEEECS
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC--CEEEEECCHHHH-HHHHHHHhhhccccc-ceeEEEeeHHHhhCCCCEEEECC
Confidence            46899999985 99999999999998  899988853211 1221111100   00 0111222  22334699999999


Q ss_pred             cCCC
Q 019060          106 CPAS  109 (346)
Q Consensus       106 ~~~~  109 (346)
                      +...
T Consensus       202 g~~~  205 (287)
T 1nvt_A          202 PIGM  205 (287)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            7543

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.08  E-value=0.016  Score=51.05  Aligned_cols=35  Identities=17%  Similarity=0.108  Sum_probs=31.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++|+|+||+|.||...++.+...| .+|++++++.
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~G-a~Vi~~~~~~  199 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEG-FRPIVTVRRD  199 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESCG
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            3799999999999999999999999 8999998754

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.08  E-value=0.019  Score=48.42  Aligned_cols=66  Identities=17%  Similarity=0.145  Sum_probs=42.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      +|+|.|+|+ |.+|+.+++.|.+.| ++ |.+++|+..    ........-++.. ..|+.+ ...++|+||.+.
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g-~~~v~~~~~~~~----~~~~~~~~~g~~~-~~~~~~-~~~~~Dvvi~av   76 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKG-FRIVQVYSRTEE----SARELAQKVEAEY-TTDLAE-VNPYAKLYIVSL   76 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHT-CCEEEEECSSHH----HHHHHHHHTTCEE-ESCGGG-SCSCCSEEEECC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCC-CeEEEEEeCCHH----HHHHHHHHcCCce-eCCHHH-HhcCCCEEEEec
Confidence            479999995 999999999999999 87 888887432    2221111112332 223222 223689999865

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=96.05  E-value=0.003  Score=56.25  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+|+ |.||..+++.+...| .+|++++++.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~G-a~Vi~~~~~~  221 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFG-SKVTVISTSP  221 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            5789999996 999999999999999 8999988754

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.04  E-value=0.01  Score=51.03  Aligned_cols=67  Identities=12%  Similarity=0.184  Sum_probs=40.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .|.+||.++| .|.+|..+++.|+++| |+|++.+|+.....    ++. ..+...  ++.......+.|+||-+.
T Consensus         3 ~Ms~kIgfIG-LG~MG~~mA~~L~~~G-~~V~v~dr~~~~~~----~l~-~~G~~~--~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            3 AMSEKIAFLG-LGNLGTPIAEILLEAG-YELVVWNRTASKAE----PLT-KLGATV--VENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEC-------C----TTT-TTTCEE--CSSGGGGCCTTCEEEECC
T ss_pred             CCCCcEEEEe-cHHHHHHHHHHHHHCC-CeEEEEeCCHHHHH----HHH-HcCCeE--eCCHHHHHhcCCceeeec
Confidence            3567899998 8999999999999999 99999998653322    111 123322  222222234689998765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.04  E-value=0.01  Score=54.30  Aligned_cols=36  Identities=17%  Similarity=0.200  Sum_probs=31.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+||+|.||...++.+...| .+|++++++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~  254 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSS  254 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCC
Confidence            346899999999999999999999999 888888864

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.02  E-value=0.02  Score=52.43  Aligned_cols=74  Identities=16%  Similarity=0.021  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCC-CCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE-VDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-~d~vi~~a~~  107 (346)
                      .+++|+|+|. |-.|.++++.|.+.| ++|++.++...... ...+.+...++++..+...+....+ +|.||...|.
T Consensus         8 ~~k~v~viG~-G~sG~s~A~~l~~~G-~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi   82 (451)
T 3lk7_A            8 ENKKVLVLGL-ARSGEAAARLLAKLG-AIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGI   82 (451)
T ss_dssp             TTCEEEEECC-TTTHHHHHHHHHHTT-CEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCC-CEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcC
Confidence            3689999997 889999999999999 99999998542111 1222233346777665443322234 8999987664

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=95.97  E-value=0.0056  Score=53.86  Aligned_cols=37  Identities=22%  Similarity=0.119  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|||+||+|.+|...++.+...| .+|++++++.
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  179 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILN-FRLIAVTRNN  179 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            356899999999999999999999999 8999998865

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=95.95  E-value=0.0023  Score=56.70  Aligned_cols=36  Identities=19%  Similarity=0.234  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+||+|.||..+++.+...| .+|++++|+.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~G-a~Vi~~~~~~  202 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFG-AEVYATAGST  202 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcC-CEEEEEeCCH
Confidence            46899999999999999999999999 8999998753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.94  E-value=0.018  Score=48.90  Aligned_cols=64  Identities=22%  Similarity=0.258  Sum_probs=43.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCee-EEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFE-LIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|.|+| .|.+|..+++.|.+.| ++|++++|+..    ....... .++. ....|+.+.  .++|+||.+.
T Consensus         1 m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~~~----~~~~~~~-~g~~~~~~~~~~~~--~~~D~vi~av   65 (279)
T 2f1k_A            1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGVSRQQS----TCEKAVE-RQLVDEAGQDLSLL--QTAKIIFLCT   65 (279)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHH----HHHHHHH-TTSCSEEESCGGGG--TTCSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCC-CEEEEEECCHH----HHHHHHh-CCCCccccCCHHHh--CCCCEEEEEC
Confidence            6899999 7999999999999999 89999988532    2211111 1221 122333332  5789999876

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.93  E-value=0.02  Score=46.48  Aligned_cols=34  Identities=21%  Similarity=0.279  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..|+|.|+| .|.+|+.++..|.+.| ++|++++|+
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g-~~V~~~~~~   51 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAG-HEVTYYGSK   51 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEcCC
Confidence            468999999 8999999999999999 999999874

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=95.90  E-value=0.034  Score=50.65  Aligned_cols=33  Identities=36%  Similarity=0.464  Sum_probs=30.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|.|+| +|++|..++..|.+.| ++|++++|+.
T Consensus         1 mkI~VIG-~G~vG~~~A~~la~~G-~~V~~~d~~~   33 (436)
T 1mv8_A            1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGVDVSS   33 (436)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            6899998 8999999999999999 9999998853

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=95.89  E-value=0.092  Score=48.18  Aligned_cols=36  Identities=17%  Similarity=0.167  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCC-eEEEEeCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKN-EVIVVDNYFT   68 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~-~V~~~~r~~~   68 (346)
                      ..|+|.|+| .|++|..++..|.+. | + +|++++|+..
T Consensus        17 ~~mkIaVIG-lG~mG~~lA~~la~~~G-~~~V~~~D~~~~   54 (478)
T 3g79_A           17 PIKKIGVLG-MGYVGIPAAVLFADAPC-FEKVLGFQRNSK   54 (478)
T ss_dssp             SCCEEEEEC-CSTTHHHHHHHHHHSTT-CCEEEEECCCCT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHhCC-CCeEEEEECChh
Confidence            458999998 899999999999999 9 9 9999999764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=95.89  E-value=0.0049  Score=53.20  Aligned_cols=38  Identities=18%  Similarity=0.206  Sum_probs=33.5

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ...+.+|||+|++|.+|..+++.+...| .+|++++++.
T Consensus       123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G-a~Vi~~~~~~  160 (302)
T 1iz0_A          123 ARPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRP  160 (302)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSG
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            3457899999999999999999999999 8999998854

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=95.88  E-value=0.041  Score=46.44  Aligned_cols=34  Identities=29%  Similarity=0.413  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+|+|||+| .|-+|...++.|++.| +.|++++..
T Consensus        12 ~~k~VLVVG-gG~va~rka~~Ll~~G-a~VtViap~   45 (274)
T 1kyq_A           12 KDKRILLIG-GGEVGLTRLYKLMPTG-CKLTLVSPD   45 (274)
T ss_dssp             TTCEEEEEE-ESHHHHHHHHHHGGGT-CEEEEEEEE
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHhCC-CEEEEEcCC
Confidence            478999999 7899999999999999 999998754

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.88  E-value=0.08  Score=46.64  Aligned_cols=99  Identities=19%  Similarity=0.158  Sum_probs=61.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-------------------cC--CC--CeeEEec
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-------------------IG--HP--RFELIRH   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-------------------~~--~~--~~~~~~~   88 (346)
                      +.+|+|+|+ |.+|+++++.|...|.-+++++++..-.. ..+.++                   +.  .+  .+..+..
T Consensus       118 ~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~-sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~  195 (353)
T 3h5n_A          118 NAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIEN-TNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL  195 (353)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCG-GGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcc-cccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence            579999995 77999999999999977899998753111 111111                   00  22  3445555


Q ss_pred             ccCCcc----cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060           89 DVTEPL----LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus        89 d~~~~~----~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                      ++....    ..++|+||.+.....      .          .-..+-++|.+.++.+|+.+..
T Consensus       196 ~i~~~~~~~~~~~~DlVvd~~Dn~~------~----------~r~~ln~~c~~~~~p~i~~~~~  243 (353)
T 3h5n_A          196 NINDYTDLHKVPEADIWVVSADHPF------N----------LINWVNKYCVRANQPYINAGYV  243 (353)
T ss_dssp             CCCSGGGGGGSCCCSEEEECCCCST------T----------HHHHHHHHHHHTTCCEEEEEEE
T ss_pred             ccCchhhhhHhccCCEEEEecCChH------H----------HHHHHHHHHHHhCCCEEEEEEe
Confidence            544332    457999998652110      0          1123457888888888876543

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.86  E-value=0.055  Score=47.16  Aligned_cols=71  Identities=14%  Similarity=-0.029  Sum_probs=46.6

Q ss_pred             CCEEEEEcCchhHHHH-HHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-CCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-IEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~-l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~d~vi~~a~~  107 (346)
                      +|+|.++| -|..|.+ +++.|.++| ++|.+.++.....   ....+...++++..+.-.+... .++|.||...|.
T Consensus         4 ~~~i~~iG-iGg~Gms~~A~~L~~~G-~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi   76 (326)
T 3eag_A            4 MKHIHIIG-IGGTFMGGLAAIAKEAG-FEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVA   76 (326)
T ss_dssp             CCEEEEES-CCSHHHHHHHHHHHHTT-CEEEEEESSCCTT---HHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTC
T ss_pred             CcEEEEEE-ECHHHHHHHHHHHHhCC-CEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCc
Confidence            57899999 6667875 999999999 9999999854211   1122222467766553222112 368999987654

>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*

Probab=95.86  E-value=0.058  Score=47.09  Aligned_cols=32  Identities=22%  Similarity=0.455  Sum_probs=26.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEe
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVD   64 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~   64 (346)
                      ++||.|.|+ |.||+.+++.|.++  +..+|+++.
T Consensus         2 ~ikVgI~G~-G~IGr~v~r~l~~~~~~~~evvaIn   35 (339)
T 3b1j_A            2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAIN   35 (339)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSCCSEEEEEEE
T ss_pred             ceEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEEe
Confidence            369999999 99999999999987  435666654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=95.73  E-value=0.013  Score=51.05  Aligned_cols=37  Identities=19%  Similarity=0.056  Sum_probs=32.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+++|||+||+|.+|...++.+...| .+|++++++.
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~G-a~Vi~~~~~~  175 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALG-AKLIGTVSSP  175 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-CEEEEEeCCH
Confidence            347899999999999999999999999 8999998743

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=95.72  E-value=0.11  Score=39.00  Aligned_cols=34  Identities=21%  Similarity=0.328  Sum_probs=29.7

Q ss_pred             CCEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .++|.|+|+|   |.+|..+++.|++.| ++|+.++++
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G-~~V~~vnp~   50 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPN   50 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTT
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCC-CEEEEeCCC
Confidence            4689999997   999999999999999 888887653

>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*

Probab=95.71  E-value=0.08  Score=48.47  Aligned_cols=69  Identities=17%  Similarity=0.209  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      .+|+|||+| .|-+|...++.|++.| ..|++++...   ...+..+....++.++..+.......++|.||-+
T Consensus        11 ~~~~vlVvG-gG~va~~k~~~L~~~g-a~V~vi~~~~---~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~a   79 (457)
T 1pjq_A           11 RDRDCLIVG-GGDVAERKARLLLEAG-ARLTVNALTF---IPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAA   79 (457)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTT-BEEEEEESSC---CHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEEC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCc-CEEEEEcCCC---CHHHHHHHhcCCEEEEECCCCccccCCccEEEEc
Confidence            468999999 7889999999999999 9999998632   2344444444578888888776666688988853

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.70  E-value=0.0051  Score=52.50  Aligned_cols=74  Identities=15%  Similarity=0.166  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCc--ccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEP--LLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~--~~~~~d~vi~~a~  106 (346)
                      .+++++|+|+ |.+|+.++..|.+.|..+|++++|+..+.. .+.+.+.  .+.+.....++.+.  ...++|+||++..
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~-~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp  203 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQ-ALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHH-HHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHH-HHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence            4689999997 899999999999999337999998643221 2211111  01222222222221  1235899999864

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.69  E-value=0.069  Score=44.13  Aligned_cols=57  Identities=26%  Similarity=0.282  Sum_probs=38.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeE-EEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEV-IVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+|. |.+|+.+++.|.+.| +++ .+.+|+. .. +         .   ...|+.+....++|+||.+.
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g-~~lv~v~d~~~-~~-~---------~---~~~~~~~l~~~~~DvVv~~~   58 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNG-FEIAAILDVRG-EH-E---------K---MVRGIDEFLQREMDVAVEAA   58 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEECSSC-CC-T---------T---EESSHHHHTTSCCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCC-CEEEEEEecCc-ch-h---------h---hcCCHHHHhcCCCCEEEECC
Confidence            68999996 999999999999878 887 4666642 11 0         0   22222221114689999876

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.66  E-value=0.012  Score=51.53  Aligned_cols=65  Identities=8%  Similarity=0.003  Sum_probs=49.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a  105 (346)
                      .++|+|+|+ |.+|+.+++.|.+.| + |++++++.    +...  ....++..+.+|.++++.      .++|.|+-+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g-~-v~vid~~~----~~~~--~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~  185 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSE-V-FVLAEDEN----VRKK--VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL  185 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSC-E-EEEESCGG----GHHH--HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCC-c-EEEEeCCh----hhhh--HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence            468999995 999999999999999 8 98888643    2222  222578999999988743      2688888755

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=95.66  E-value=0.019  Score=50.62  Aligned_cols=36  Identities=25%  Similarity=0.253  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~   67 (346)
                      .+++|||+|++|.||..+++.+... | .+|++++++.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~  206 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVRE  206 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCH
Confidence            4689999999999999999999999 9 8999998753

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.65  E-value=0.0084  Score=51.83  Aligned_cols=35  Identities=9%  Similarity=0.136  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .++++||+|+ |.+|+.++..|.+.|..+|++++|+
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt  181 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRK  181 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            4689999996 8899999999999994489999996

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=95.63  E-value=0.028  Score=49.21  Aligned_cols=32  Identities=22%  Similarity=0.397  Sum_probs=26.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      ++||.|.|+ |++|+.+++.|.++...+++++.
T Consensus         2 ~irVgIiG~-G~iG~~~~r~l~~~~~~elvav~   33 (334)
T 2czc_A            2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGIT   33 (334)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEE
T ss_pred             CcEEEEEeE-hHHHHHHHHHHhcCCCCEEEEEE
Confidence            469999997 99999999999887645766654

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=95.61  E-value=0.11  Score=39.21  Aligned_cols=84  Identities=13%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CCEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .++|+|+|+|   |.+|..+++.|.+.| ++|+.++...    ..+      .++..+ .++.+.. ..+|.++-+.-  
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G-~~v~~Vnp~~----~~i------~G~~~y-~sl~~l~-~~vDlvvi~vp--   86 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPKY----EEV------LGRKCY-PSVLDIP-DKIEVVDLFVK--   86 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEE------TTEECB-SSGGGCS-SCCSEEEECSC--
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCC-CEEEEECCCC----CeE------CCeecc-CCHHHcC-CCCCEEEEEeC--
Confidence            4689999998   899999999999999 8876664321    111      122222 2233322 25898887541  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEe
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS  146 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~S  146 (346)
                                      ......+++.|.+.|++.+.+.
T Consensus        87 ----------------~~~~~~vv~~~~~~gi~~i~~~  108 (144)
T 2d59_A           87 ----------------PKLTMEYVEQAIKKGAKVVWFQ  108 (144)
T ss_dssp             ----------------HHHHHHHHHHHHHHTCSEEEEC
T ss_pred             ----------------HHHHHHHHHHHHHcCCCEEEEC
Confidence                            1235567777777888655544

>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3

Probab=95.58  E-value=0.07  Score=43.37  Aligned_cols=73  Identities=21%  Similarity=0.329  Sum_probs=47.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEE-EeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      .|+.+|+|++|-+|+.+++.+.+.+ +++.+ +++..    .               .|+     .++|++|....+.  
T Consensus        12 ~~~~~v~Ga~GrMG~~i~~~~~~~~-~elv~~id~~~----~---------------~~l-----~~~DVvIDFT~P~--   64 (228)
T 1vm6_A           12 HMKYGIVGYSGRMGQEIQKVFSEKG-HELVLKVDVNG----V---------------EEL-----DSPDVVIDFSSPE--   64 (228)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEETTE----E---------------EEC-----SCCSEEEECSCGG--
T ss_pred             cceeEEEEecCHHHHHHHHHHhCCC-CEEEEEEcCCC----c---------------ccc-----cCCCEEEECCCHH--
Confidence            5899999999999999988766667 77654 44421    0               112     1479999766321  


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                      .+...++.|.+.++++|.-+|
T Consensus        65 ----------------a~~~~~~~~~~~g~~~ViGTT   85 (228)
T 1vm6_A           65 ----------------ALPKTVDLCKKYRAGLVLGTT   85 (228)
T ss_dssp             ----------------GHHHHHHHHHHHTCEEEECCC
T ss_pred             ----------------HHHHHHHHHHHcCCCEEEeCC
Confidence                            344566777777776654333

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=95.51  E-value=0.018  Score=50.49  Aligned_cols=35  Identities=20%  Similarity=0.133  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+++|||+|+ |.+|..+++.+...| .+|++++|+
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~G-a~Vi~~~~~  197 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMG-LNVVAVDIG  197 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTT-CEEEEECSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcC-CEEEEEeCC
Confidence            35789999999 669999999999999 899999874

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.51  E-value=0.015  Score=50.36  Aligned_cols=34  Identities=35%  Similarity=0.567  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|+|+|+| .|.+|..++..|.+.| ++|++++|+.
T Consensus         3 ~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAG-AGAMGSRLGIMLHQGG-NDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCeEEEEC-cCHHHHHHHHHHHhCC-CcEEEEECCH
Confidence            57999999 5999999999999999 9999999853

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.49  E-value=0.033  Score=47.29  Aligned_cols=69  Identities=19%  Similarity=0.219  Sum_probs=45.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      .+|+|+|+| .|.+|+.++..|.+.| .+|++++|+.    +....+...-++.... ++.+ ...++|+||++...
T Consensus       128 ~~~~v~iiG-aG~~g~aia~~L~~~g-~~V~v~~r~~----~~~~~l~~~~g~~~~~-~~~~-~~~~aDiVi~atp~  196 (275)
T 2hk9_A          128 KEKSILVLG-AGGASRAVIYALVKEG-AKVFLWNRTK----EKAIKLAQKFPLEVVN-SPEE-VIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSSH----HHHHHHTTTSCEEECS-CGGG-TGGGCSEEEECSST
T ss_pred             CCCEEEEEC-chHHHHHHHHHHHHcC-CEEEEEECCH----HHHHHHHHHcCCeeeh-hHHh-hhcCCCEEEEeCCC
Confidence            358999999 5889999999999999 7999998853    2222222111333221 2222 22369999998754

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=95.48  E-value=0.06  Score=39.40  Aligned_cols=84  Identities=12%  Similarity=0.063  Sum_probs=55.3

Q ss_pred             CEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      ++|+|+|+|   +-.|..+.+.|++.| ++|+.+....    ...      .+.+ ...++.+...  +|.++-+..   
T Consensus         5 ~siAVVGaS~~~~~~g~~v~~~L~~~g-~~V~pVnP~~----~~i------~G~~-~y~sl~dlp~--vDlavi~~p---   67 (122)
T 3ff4_A            5 KKTLILGATPETNRYAYLAAERLKSHG-HEFIPVGRKK----GEV------LGKT-IINERPVIEG--VDTVTLYIN---   67 (122)
T ss_dssp             CCEEEETCCSCTTSHHHHHHHHHHHHT-CCEEEESSSC----SEE------TTEE-CBCSCCCCTT--CCEEEECSC---
T ss_pred             CEEEEEccCCCCCCHHHHHHHHHHHCC-CeEEEECCCC----CcC------CCee-ccCChHHCCC--CCEEEEEeC---
Confidence            589999998   679999999999999 8998886421    111      1111 2234444433  788876541   


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                     -..+..+++.|.+.|+|.|.+++.
T Consensus        68 ---------------~~~v~~~v~e~~~~g~k~v~~~~G   91 (122)
T 3ff4_A           68 ---------------PQNQLSEYNYILSLKPKRVIFNPG   91 (122)
T ss_dssp             ---------------HHHHGGGHHHHHHHCCSEEEECTT
T ss_pred             ---------------HHHHHHHHHHHHhcCCCEEEECCC
Confidence                           223556777888888876667654

>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*

Probab=95.47  E-value=0.046  Score=47.77  Aligned_cols=32  Identities=28%  Similarity=0.533  Sum_probs=26.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHh---cCCCeEEEEe
Q 019060           32 NMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVD   64 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~---~g~~~V~~~~   64 (346)
                      .+||.|.|+ |+||+.+++.|.+   +...+|+++.
T Consensus         2 ~ikVgI~G~-G~iGr~l~r~l~~~~~~~~~eivai~   36 (339)
T 2x5j_O            2 TVRVAINGF-GRIGRNVVRALYESGRRAEITVVAIN   36 (339)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHTSGGGTEEEEEEE
T ss_pred             CeEEEEECc-CHHHHHHHHHHHcCCCCCCEEEEEEe
Confidence            369999998 9999999999998   6436776654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.46  E-value=0.018  Score=50.11  Aligned_cols=66  Identities=12%  Similarity=0.117  Sum_probs=44.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      .+|+|.|+| .|.+|..+++.|.+.| ++|++++|+.    +....+.. .++... .|+ .....++|+||-+.
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G-~~V~~~dr~~----~~~~~l~~-~g~~~~-~~~-~e~~~~aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAG-YALQVWNRTP----ARAASLAA-LGATIH-EQA-RAAARDADIVVSML   95 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHT-TTCEEE-SSH-HHHHTTCSEEEECC
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCC-CeEEEEcCCH----HHHHHHHH-CCCEee-CCH-HHHHhcCCEEEEEC
Confidence            468999997 7999999999999999 9999999853    22222222 133321 111 11223689998765

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=95.44  E-value=0.014  Score=49.55  Aligned_cols=68  Identities=19%  Similarity=0.238  Sum_probs=43.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++++|+|+ |.+|+.++..|.+.| . +|++++|+..+.    ..+..  .+.....+-......++|+||++..
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G-~~~v~v~~R~~~~a----~~la~--~~~~~~~~~~~~~~~~aDiVInaTp  184 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIV-RPTLTVANRTMSRF----NNWSL--NINKINLSHAESHLDEFDIIINTTP  184 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTC-CSCCEEECSCGGGG----TTCCS--CCEEECHHHHHHTGGGCSEEEECCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEeCCHHHH----HHHHH--hcccccHhhHHHHhcCCCEEEECcc
Confidence            3679999996 889999999999999 6 899999864221    11111  2222211111112336899998763

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=95.44  E-value=0.0029  Score=55.89  Aligned_cols=34  Identities=26%  Similarity=0.316  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~   66 (346)
                      .+.+|||+|+ |.+|..+++.+...| . +|++++|+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~G-a~~Vi~~~~~  201 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASG-AYPVIVSEPS  201 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTT-CCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEECCC
Confidence            4679999999 999999999999999 7 89999875

>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1

Probab=95.42  E-value=0.021  Score=50.04  Aligned_cols=94  Identities=9%  Similarity=0.093  Sum_probs=54.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEec-ccC------------Ccc--cCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH-DVT------------EPL--LIE   97 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-d~~------------~~~--~~~   97 (346)
                      +||.|.|+ |.+|+.+++.|.++...+++++..............   .++..+.. |..            +.+  ..+
T Consensus         2 ikVgIiGa-G~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~---~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~   77 (340)
T 1b7g_O            2 VNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHR---RGIRIYVPQQSIKKFEESGIPVAGTVEDLIKT   77 (340)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHH---TTCCEECCGGGHHHHHTTTCCCCCCHHHHHHH
T ss_pred             eEEEEEec-CHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHh---cCcceecCcCHHHHhcccccccccCHhHhhcC
Confidence            58999999 999999999998876456665543222211111111   12222221 110            000  125


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                      +|+||.+.+..                  ........+.+.|+++|..|+.
T Consensus        78 vDvV~~aTp~~------------------~s~~~a~~~~~aG~kvV~~sa~  110 (340)
T 1b7g_O           78 SDIVVDTTPNG------------------VGAQYKPIYLQLQRNAIFQGGE  110 (340)
T ss_dssp             CSEEEECCSTT------------------HHHHHHHHHHHTTCEEEECTTS
T ss_pred             CCEEEECCCCc------------------hhHHHHHHHHHcCCeEEEeCCC
Confidence            89999887432                  1334556667778888888876

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=95.40  E-value=0.02  Score=49.70  Aligned_cols=36  Identities=17%  Similarity=0.132  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |.|+|.|+| .|.+|..+++.|.+.|.++|++++|+.
T Consensus        23 M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           23 MMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             cCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            568999999 899999999999999857999999864

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.30  E-value=0.11  Score=45.50  Aligned_cols=103  Identities=11%  Similarity=0.197  Sum_probs=63.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------------------CcchhhhhcC--CCC--eeEEecc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------------------SKDNLRKWIG--HPR--FELIRHD   89 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------------------~~~~~~~~~~--~~~--~~~~~~d   89 (346)
                      +.+|+|.| .|.+|.++++.|...|...+++++...-.                  +.+...+.+.  .+.  +..+..+
T Consensus        36 ~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~  114 (346)
T 1y8q_A           36 ASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTED  114 (346)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSC
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEecc
Confidence            57999999 57799999999999996688888643110                  0001111111  233  4445544


Q ss_pred             cCCc---ccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           90 VTEP---LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        90 ~~~~---~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      +.+.   ...++|+||.+..                 |...-..+-++|++.++.+|..++...+|
T Consensus       115 ~~~~~~~~~~~~dvVv~~~d-----------------~~~~r~~ln~~~~~~~ip~i~~~~~G~~G  163 (346)
T 1y8q_A          115 IEKKPESFFTQFDAVCLTCC-----------------SRDVIVKVDQICHKNSIKFFTGDVFGYHG  163 (346)
T ss_dssp             GGGCCHHHHTTCSEEEEESC-----------------CHHHHHHHHHHHHHTTCEEEEEEEEBTEE
T ss_pred             cCcchHHHhcCCCEEEEcCC-----------------CHHHHHHHHHHHHHcCCCEEEEeecccEE
Confidence            4321   1236999997641                 12233456678888888898887766555

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.29  E-value=0.048  Score=46.08  Aligned_cols=36  Identities=14%  Similarity=0.252  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -.+++++|+|+++.+|+.++..|+..| ..|++..|.
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~g-AtVtv~h~~  193 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAG-ATVSVCHIK  193 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCC-CeEEEEeCC
Confidence            357999999999999999999999999 899998764

>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O

Probab=95.28  E-value=0.099  Score=45.65  Aligned_cols=33  Identities=24%  Similarity=0.455  Sum_probs=27.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ++||.|.|+ |.||+.+++.|.++...+|+++.-
T Consensus         3 ~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d   35 (337)
T 3e5r_O            3 KIKIGINGF-GRIGRLVARVALQSEDVELVAVND   35 (337)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             ceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEEC
Confidence            369999999 999999999999875367776653

>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A

Probab=95.25  E-value=0.11  Score=45.83  Aligned_cols=32  Identities=22%  Similarity=0.455  Sum_probs=26.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc--CCCeEEEEe
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN--EKNEVIVVD   64 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~--g~~~V~~~~   64 (346)
                      ++||.|.|+ |.||+.+++.|.++  ...+|+++.
T Consensus         2 ~ikVgInGf-GrIGr~vlR~l~~~~~~~veIVaIn   35 (380)
T 2d2i_A            2 TIRVAINGF-GRIGRNFLRCWFGRQNTDLEVVAIN   35 (380)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred             CcEEEEECc-CHHHHHHHHHHhcCCCCCEEEEEEe
Confidence            469999999 99999999999987  435666654

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.22  E-value=0.025  Score=48.72  Aligned_cols=34  Identities=24%  Similarity=0.437  Sum_probs=30.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|+|.|+|+ |.+|..++..|.+.| ++|++++|+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G-~~V~~~d~~~   48 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATG-HTVVLVDQTE   48 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CeEEEEECCH
Confidence            468999995 999999999999999 9999999854

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.20  E-value=0.044  Score=46.04  Aligned_cols=36  Identities=14%  Similarity=0.179  Sum_probs=32.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -.+++++|+|+++.+|+.++..|+..| ..|++..+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~g-AtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRN-YTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCC-CeEEEEeCC
Confidence            457999999999999999999999999 899998764

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=95.18  E-value=0.022  Score=50.29  Aligned_cols=34  Identities=21%  Similarity=0.111  Sum_probs=30.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|+|+|+| .|.+|..++..|.+.| ++|++++|+.
T Consensus         4 ~mki~iiG-~G~~G~~~a~~L~~~g-~~V~~~~r~~   37 (359)
T 1bg6_A            4 SKTYAVLG-LGNGGHAFAAYLALKG-QSVLAWDIDA   37 (359)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             cCeEEEEC-CCHHHHHHHHHHHhCC-CEEEEEeCCH
Confidence            47999999 5999999999999999 9999998853

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.17  E-value=0.019  Score=49.31  Aligned_cols=34  Identities=21%  Similarity=0.443  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |.|+|.|+| .|.+|..+++.|.+.| ++|.+++|+
T Consensus         4 M~m~i~iiG-~G~~G~~~a~~l~~~g-~~V~~~~~~   37 (299)
T 1vpd_A            4 MTMKVGFIG-LGIMGKPMSKNLLKAG-YSLVVSDRN   37 (299)
T ss_dssp             --CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSC
T ss_pred             ccceEEEEC-chHHHHHHHHHHHhCC-CEEEEEeCC
Confidence            457999999 7999999999999999 999999885

>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*

Probab=95.17  E-value=0.064  Score=47.03  Aligned_cols=33  Identities=21%  Similarity=0.350  Sum_probs=27.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ++||.|.|+ |+||+.+++.|.++...+|+++.-
T Consensus        17 ~ikVgI~G~-G~iGr~llR~l~~~p~veivaind   49 (354)
T 3cps_A           17 QGTLGINGF-GRIGRLVLRACMERNDITVVAIND   49 (354)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCSSCEEEEEEC
T ss_pred             ceEEEEECC-CHHHHHHHHHHHcCCCeEEEEecC
Confidence            469999999 999999999999885477777653

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=95.16  E-value=0.0083  Score=52.59  Aligned_cols=31  Identities=23%  Similarity=0.451  Sum_probs=25.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      +||.|.|+ |++|+.+++.|.++...+++++.
T Consensus         2 ikVgIiGa-G~iG~~l~r~L~~~~~~elvav~   32 (337)
T 1cf2_P            2 KAVAINGY-GTVGKRVADAIAQQDDMKVIGVS   32 (337)
T ss_dssp             EEEEEECC-STTHHHHHHHHHTSSSEEEEEEE
T ss_pred             eEEEEEeE-CHHHHHHHHHHHcCCCcEEEEEE
Confidence            58999999 99999999999886546766554

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=95.14  E-value=0.027  Score=48.07  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=30.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      |+|.|+|+ |.+|..++..|.+.| ++|++++|+..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g-~~V~~~~r~~~   34 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQ   34 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCC-CCEEEEEcCcc
Confidence            68999995 999999999999999 99999998653

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=95.13  E-value=0.024  Score=49.37  Aligned_cols=35  Identities=34%  Similarity=0.355  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |.|+|+|+| .|-+|..++..|.+.| ++|++++|+.
T Consensus         1 M~mkI~IiG-aGaiG~~~a~~L~~~g-~~V~~~~r~~   35 (320)
T 3i83_A            1 MSLNILVIG-TGAIGSFYGALLAKTG-HCVSVVSRSD   35 (320)
T ss_dssp             --CEEEEES-CCHHHHHHHHHHHHTT-CEEEEECSTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCC-CeEEEEeCCh
Confidence            458999998 7999999999999999 9999999954

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=95.08  E-value=0.022  Score=50.43  Aligned_cols=72  Identities=21%  Similarity=0.148  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEec----ccCCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRH----DVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----d~~~~~~~~~d~vi~~a  105 (346)
                      ..+.+|||+|+ |.+|...++.+...| .+|++++++..+ .+...+ +...  ..+..    |+.+....++|+||.++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~G-a~Vi~~~~~~~~-~~~~~~-lGa~--~v~~~~~~~~~~~~~~~~~D~vid~~  251 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMG-AETYVISRSSRK-REDAMK-MGAD--HYIATLEEGDWGEKYFDTFDLIVVCA  251 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHT-CEEEEEESSSTT-HHHHHH-HTCS--EEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEcCCHHH-HHHHHH-cCCC--EEEcCcCchHHHHHhhcCCCEEEECC
Confidence            34689999999 999999999999899 789999875432 222222 2211  11211    11111113699999998


Q ss_pred             cC
Q 019060          106 CP  107 (346)
Q Consensus       106 ~~  107 (346)
                      |.
T Consensus       252 g~  253 (360)
T 1piw_A          252 SS  253 (360)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=95.08  E-value=0.024  Score=50.41  Aligned_cols=34  Identities=18%  Similarity=0.125  Sum_probs=30.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      ..+.+|||+||+|.+|...++.+...| .+|+++.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G-a~Vi~~~  196 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSG-YIPIATC  196 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCC-CEEEEEe
Confidence            457899999999999999999999999 7888775

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.07  E-value=0.017  Score=49.72  Aligned_cols=36  Identities=19%  Similarity=0.317  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      +.|+|.|+| .|.+|..+++.|.+.| ++|++++|+..
T Consensus        14 ~~~~I~vIG-~G~mG~~~A~~l~~~G-~~V~~~dr~~~   49 (296)
T 3qha_A           14 EQLKLGYIG-LGNMGAPMATRMTEWP-GGVTVYDIRIE   49 (296)
T ss_dssp             -CCCEEEEC-CSTTHHHHHHHHTTST-TCEEEECSSTT
T ss_pred             CCCeEEEEC-cCHHHHHHHHHHHHCC-CeEEEEeCCHH
Confidence            357999998 8999999999999999 99999998654

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.06  E-value=0.042  Score=48.94  Aligned_cols=65  Identities=18%  Similarity=0.240  Sum_probs=44.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----CCCEEEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----EVDQIYH  103 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~d~vi~  103 (346)
                      .++++|+|+| .|.+|+.+++.+.+.| ++|++++.......   .. ..   -..+..|..|.+.+     ++|+|..
T Consensus        10 ~~~~~IlIlG-~G~lg~~la~aa~~lG-~~viv~d~~~~~p~---~~-~a---d~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIG-GGQLGKMMAQSAQKMG-YKVVVLDPSEDCPC---RY-VA---HEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCTTCTT---GG-GS---SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEECCCCChh---hh-hC---CEEEECCCCCHHHHHHHHHhCCccee
Confidence            3568999999 6889999999999999 99999986432111   11 11   13455666665322     4787754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=95.06  E-value=0.029  Score=49.31  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=30.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~   66 (346)
                      .+.+|||+|+ |.+|..+++.+...| . +|++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~G-a~~Vi~~~~~  198 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASG-AGPILVSDPN  198 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTT-CCSEEEECSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcC-CCEEEEECCC
Confidence            4679999999 999999999999999 7 89999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=95.03  E-value=0.021  Score=50.93  Aligned_cols=35  Identities=20%  Similarity=0.364  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ..+.+|||+||+|.||...++.+...| .+|+++++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~G-a~Vi~~~~  216 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWD-AHVTAVCS  216 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEeC
Confidence            346799999999999999999999999 78888774

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=94.99  E-value=0.033  Score=48.58  Aligned_cols=33  Identities=30%  Similarity=0.313  Sum_probs=30.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|||+||+|.+|...++.+...| .+|++++++.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~G-a~vi~~~~~~  184 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKA  184 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            89999999999999999999999 8899988864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=94.89  E-value=0.013  Score=51.11  Aligned_cols=71  Identities=18%  Similarity=0.269  Sum_probs=45.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC---cccCCCCEEEEccc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLAC  106 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~d~vi~~a~  106 (346)
                      ..+.+|||+||+|.+|...++.+...| .+|+++++..  +.+..++ +...  ..+..+-.+   ....++|+||.+.|
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~G-a~vi~~~~~~--~~~~~~~-lGa~--~~i~~~~~~~~~~~~~g~D~v~d~~g  224 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKG-TTVITTASKR--NHAFLKA-LGAE--QCINYHEEDFLLAISTPVDAVIDLVG  224 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEECHH--HHHHHHH-HTCS--EEEETTTSCHHHHCCSCEEEEEESSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcC-CEEEEEeccc--hHHHHHH-cCCC--EEEeCCCcchhhhhccCCCEEEECCC
Confidence            357899999999999999999999999 7888887532  2222222 2211  122211111   11246999999885

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=94.88  E-value=0.014  Score=51.82  Aligned_cols=72  Identities=19%  Similarity=0.306  Sum_probs=45.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC--cccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE--PLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~d~vi~~a~~  107 (346)
                      .++|+|+|+ |-+|+.+++.|...| .+|++++|+... .+.+.+.... .+..+..+..+  ....++|+||++++.
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~G-a~V~v~dr~~~r-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~DvVI~~~~~  240 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLG-AQVQIFDINVER-LSYLETLFGS-RVELLYSNSAEIETAVAEADLLIGAVLV  240 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCHHH-HHHHHHHHGG-GSEEEECCHHHHHHHHHTCSEEEECCCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEeCCHHH-HHHHHHhhCc-eeEeeeCCHHHHHHHHcCCCEEEECCCc
Confidence            379999998 999999999999999 799999985321 1122222111 12112111111  112369999998864

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=94.88  E-value=0.16  Score=42.21  Aligned_cols=82  Identities=22%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      .|+|.++| +|.||+.+++.  . + .++..+...  + ..   ++    ++ ....|+.+... ++|+|+++|+.    
T Consensus        12 ~~rV~i~G-~GaIG~~v~~~--~-~-leLv~v~~~--k-~g---el----gv-~a~~d~d~lla-~pD~VVe~A~~----   70 (253)
T 1j5p_A           12 HMTVLIIG-MGNIGKKLVEL--G-N-FEKIYAYDR--I-SK---DI----PG-VVRLDEFQVPS-DVSTVVECASP----   70 (253)
T ss_dssp             CCEEEEEC-CSHHHHHHHHH--S-C-CSEEEEECS--S-CC---CC----SS-SEECSSCCCCT-TCCEEEECSCH----
T ss_pred             cceEEEEC-cCHHHHHHHhc--C-C-cEEEEEEec--c-cc---cc----Cc-eeeCCHHHHhh-CCCEEEECCCH----
Confidence            68999999 99999999998  4 6 776554431  1 11   11    22 23345555443 89999999932    


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                    ......+..+.+.|+.+|.+|..
T Consensus        71 --------------~av~e~~~~iL~aG~dvv~~S~g   93 (253)
T 1j5p_A           71 --------------EAVKEYSLQILKNPVNYIIISTS   93 (253)
T ss_dssp             --------------HHHHHHHHHHTTSSSEEEECCGG
T ss_pred             --------------HHHHHHHHHHHHCCCCEEEcChh
Confidence                          12333445566677777766643

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=94.88  E-value=0.062  Score=45.10  Aligned_cols=65  Identities=12%  Similarity=0.173  Sum_probs=42.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|.|+| .|.+|+.++..|.+.|.++|++++|+.    +....+...-++.. ..|..+ .. ++|+||-+.
T Consensus         1 m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~r~~----~~~~~~~~~~g~~~-~~~~~~-~~-~~D~vi~~v   65 (263)
T 1yqg_A            1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGA----EKRERLEKELGVET-SATLPE-LH-SDDVLILAV   65 (263)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSH----HHHHHHHHHTCCEE-ESSCCC-CC-TTSEEEECS
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCCCCeEEEECCCH----HHHHHHHHhcCCEE-eCCHHH-Hh-cCCEEEEEe
Confidence            6899999 699999999999988746888888853    22222111113332 223333 23 789999765

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.88  E-value=0.074  Score=44.92  Aligned_cols=36  Identities=14%  Similarity=0.338  Sum_probs=32.2

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -.+++++|+|++|.+|+.++..|+..| ..|++..|.
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~g-AtVtv~hs~  194 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAK-ATVTTCHRF  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTT
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCC-CeEEEEeCC
Confidence            357899999999999999999999999 899888763

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=94.87  E-value=0.053  Score=48.03  Aligned_cols=35  Identities=23%  Similarity=0.242  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+| +|.+|...++.+...| .+|++++++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~G-a~Vi~~~~~~  223 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATG-AEVIVTSSSR  223 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcC-CEEEEEecCc
Confidence            468999999 8999999999999999 8999998743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	346
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	1e-117
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-86
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-79
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-69
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-66
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	1e-62
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-62
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-61
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	3e-60
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-55
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	2e-55
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-55
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	7e-55
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	4e-47
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-46
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	3e-45
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	9e-36
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-29
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	3e-27
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-26
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	2e-22
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	2e-21
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-19
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	6e-19
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-14
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	1e-14
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	8e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-10
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	1e-08
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-07
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	0.002

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  340 bits (873), Expect = e-117
 Identities = 197/304 (64%), Positives = 238/304 (78%), Gaps = 1/304 (0%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           RIL+TGGAGF+GSHL DKLM  + +EV VVDN+FTG K N+  WIGH  FELI HDV EP
Sbjct: 3   RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 61

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L IEVDQIYHLA PASP  Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGD
Sbjct: 62  LYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGD 121

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
           P VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM++
Sbjct: 122 PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHM 181

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGE 273
           +DGRVVSNFI QA++GEPLTV   G+QTR+F YVSD+V+GL+ LM    + P+N+GNP E
Sbjct: 182 NDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEE 241

Query: 274 FTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME 333
            T+LE A+ +K L+    EI  +    DDP++RKPDI KA  +LGWEP + L +GL    
Sbjct: 242 HTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAI 301

Query: 334 DDFR 337
             FR
Sbjct: 302 HYFR 305

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  262 bits (671), Expect = 2e-86
 Identities = 82/337 (24%), Positives = 142/337 (42%), Gaps = 34/337 (10%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-FTGSKDNLRKWIGHPRFELIRHDVT 91
           M+IL+TGGAGFIGS +V  +++N ++ V+ +D   + G+ ++L       R+     D+ 
Sbjct: 1   MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60

Query: 92  EPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA---- 140
           +   I         D + HLA  +        P   I+TN++GT  +L +A++  +    
Sbjct: 61  DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE 120

Query: 141 ------RILLTSTSEVYGDPLVHPQDES-----YWGNVNPIGVRSCYDEGKRVAETLMFD 189
                 R    ST EVYGD     + E+      +         S Y   K  ++ L+  
Sbjct: 121 DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA 180

Query: 190 YHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD 249
           + R +G+   +    N YGP    +  +++   I  A+ G+PL +   G Q R + YV D
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYGKGDQIRDWLYVED 238

Query: 250 MVDGLIRLMEGENTGPI-NIGNPGEFTMLELAENV--------KELINPNVEITMVENTP 300
               L  ++     G   NIG   E   L++   +         +  +   +IT V + P
Sbjct: 239 HARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRP 298

Query: 301 DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
              R+   D  K +  LGW+P      G+    + + 
Sbjct: 299 GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYL 335

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  243 bits (622), Expect = 2e-79
 Identities = 89/319 (27%), Positives = 143/319 (44%), Gaps = 21/319 (6%)

Query: 33  MRILVTGGAGFIGSHLVDKLMEN-----EKNEVIVVDNY-FTGSKDNLRKWIGHPRFELI 86
           MR+LVTGGAGFIGSH V +L+         +EVIV+D+  + G++ NL      PR   +
Sbjct: 1   MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60

Query: 87  RHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A 140
             D+ +  L+       D I H A  +             +TNV GT  +L  A   G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120

Query: 141 RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRI 200
           R++  ST++VYG        ES     +P+   S Y   K  ++ +   YHR +G+++RI
Sbjct: 121 RVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175

Query: 201 ARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG 260
            R  N YGP  + +  +++  F+   + G  L +   G   R + +  D   G+  ++ G
Sbjct: 176 TRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG 233

Query: 261 ENTGPI-NIGNPGEFTMLELAENVKELINPNVE-ITMVENTPDDPRQRKPDITKATELLG 318
              G I +IG   E T  EL   + + +  +   +  V +      +   D  K    LG
Sbjct: 234 GRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELG 293

Query: 319 WEPKIKLRDGLPLMEDDFR 337
           + P++   DGL      +R
Sbjct: 294 YRPQVSFADGLARTVRWYR 312

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  218 bits (556), Expect = 4e-69
 Identities = 76/349 (21%), Positives = 128/349 (36%), Gaps = 56/349 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKW--IGHPRFELIR 87
             L+TG  G  GS+L + L+E    EV  +      + T   D++ +     +P+F L  
Sbjct: 3   VALITGVTGQDGSYLAEFLLEK-GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 88  HDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
            D+++   +         D++Y+L   +       +P  T   + +GTL +L   + +G 
Sbjct: 62  GDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGL 121

Query: 140 ---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               R    STSE+YG     PQ E+      P   RS Y   K  A  +  +Y   +G+
Sbjct: 122 EKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSPYAVAKLYAYWITVNYRESYGM 176

Query: 197 EIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDGL 254
                 +FN   PR       R ++  IA   +G             R + +  D V   
Sbjct: 177 YACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236

Query: 255 IRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPD------------- 301
             +++ E      I    ++++ +  E     +   +                       
Sbjct: 237 WMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPG 296

Query: 302 ----------DPRQRKP--------DITKATELLGWEPKIKLRDGLPLM 332
                     DPR  +P        D TKA E LGW+P+I LR+ +  M
Sbjct: 297 VKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEM 345

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score =  208 bits (531), Expect = 6e-66
 Identities = 69/326 (21%), Positives = 119/326 (36%), Gaps = 33/326 (10%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  R+ + G  G +GS +  +L +   +  +V+       +D L         +    + 
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQ-RGDVELVLRT-----RDELNLLDSRAVHDFFASE- 53

Query: 91  TEPLLIEVDQIYHLACPASP-IFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTS 148
                  +DQ+Y  A      +     P   I  N++   N++  A +    ++L   +S
Sbjct: 54  ------RIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSS 107

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
            +Y      P  ES             Y   K     L   Y+RQ+G + R     N YG
Sbjct: 108 CIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 167

Query: 209 PRMNIDDGR-------VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           P  N            +     A A +   + V   GT  R F +V DM    I +ME  
Sbjct: 168 PHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 227

Query: 262 NT----------GPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDIT 311
           +             IN+G   + T+ ELA+ + +++     +    + PD   ++  D+T
Sbjct: 228 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVT 287

Query: 312 KATELLGWEPKIKLRDGLPLMEDDFR 337
           +  + LGW  +I L  GL      F 
Sbjct: 288 RLHQ-LGWYHEISLEAGLASTYQWFL 312

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  200 bits (510), Expect = 1e-62
 Identities = 80/326 (24%), Positives = 135/326 (41%), Gaps = 28/326 (8%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW------IG 79
            +        L+TG AGFIGS+L++ L++    +V+ +DN+ TG + NL +         
Sbjct: 10  KELPAQPKVWLITGVAGFIGSNLLETLLK-LDQKVVGLDNFATGHQRNLDEVRSLVSEKQ 68

Query: 80  HPRFELIRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL 134
              F+ I+ D+             D + H A   S      +P+ +  TN+ G LNML  
Sbjct: 69  WSNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIA 128

Query: 135 AKRVGARILL-TSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ 193
           A+    +     ++S  YGD    P+ E   G        S Y   K V E     + R 
Sbjct: 129 ARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKP-----LSPYAVTKYVNELYADVFSRC 183

Query: 194 HGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
           +G      R FN +G R + +     V+  + +  I+G+ + +   G  +R FCY+ + V
Sbjct: 184 YGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 243

Query: 252 DGLIRLME---GENTGPINIGNPGEFTMLELAENVKELINPN-----VEITMVENTPDDP 303
              +              NI   G  ++ +L   +++ +  N      E    +    D 
Sbjct: 244 QANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDV 303

Query: 304 RQRKPDITKATELLGWEPKIKLRDGL 329
           R    DI+KA +LLG+ PK  +  G+
Sbjct: 304 RHSLADISKAAKLLGYAPKYDVSAGV 329

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  201 bits (511), Expect = 1e-62
 Identities = 73/321 (22%), Positives = 122/321 (38%), Gaps = 18/321 (5%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT 91
             I+VTGGAGFIGS+ V  +  N  +  V V+D           + I   R EL+  D+ 
Sbjct: 3   KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62

Query: 92  EPLLIE-----VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
           +  L++      D I H A  +       +P   I TN IGT  +L  A++   R    S
Sbjct: 63  DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122

Query: 147 TSEVYGD-------PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 199
           T EVYGD       P         +         S Y   K  ++ ++  + R  G++  
Sbjct: 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKAT 182

Query: 200 IARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME 259
           I+   N YGP  +I+  + +   I   + G    +   G   R + + +D   G+  ++ 
Sbjct: 183 ISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILT 240

Query: 260 GENTGPINIGNPGEFTML--ELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELL 317
               G   +            L   ++++  P      V +      +   D +K  + L
Sbjct: 241 KGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDEL 300

Query: 318 GWEPKI-KLRDGLPLMEDDFR 337
           GW P+     +GL      + 
Sbjct: 301 GWTPQFTDFSEGLEETIQWYT 321

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  197 bits (502), Expect = 3e-61
 Identities = 82/330 (24%), Positives = 138/330 (41%), Gaps = 16/330 (4%)

Query: 19  TPSPLRFSKFFQS-NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW 77
           T   L   +++ S N++I +TG  GFI SH+  +L   E + VI  D       +++ + 
Sbjct: 1   TYKELEREQYWPSENLKISITGAGGFIASHIARRLKH-EGHYVIASDWK---KNEHMTED 56

Query: 78  IGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTI----KTNVIGTLNMLG 133
           +    F L+   V E  L   + + H+   A+ +                N + + NM+ 
Sbjct: 57  MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIE 116

Query: 134 LAKRVG-ARILLTSTSEVYG--DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY 190
            A+  G  R    S++ +Y     L          +  P   +  +   K   E L   Y
Sbjct: 117 AARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHY 176

Query: 191 HRQHGIEIRIARIFNTYGPRMNIDDGR---VVSNFIAQAIRGEPLTVQAPGTQTRSFCYV 247
           ++  GIE RI R  N YGP      GR     +         +   +   G QTRSF ++
Sbjct: 177 NKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI 236

Query: 248 SDMVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRK 307
            + V+G++RL + +   P+NIG+    +M E+AE V       + I  +   P+  R R 
Sbjct: 237 DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRGRN 295

Query: 308 PDITKATELLGWEPKIKLRDGLPLMEDDFR 337
            D     E LGW P ++L++GL +     +
Sbjct: 296 SDNNLIKEKLGWAPNMRLKEGLRITYFWIK 325

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score =  194 bits (494), Expect = 3e-60
 Identities = 75/327 (22%), Positives = 128/327 (39%), Gaps = 35/327 (10%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDV 90
           MR+LVTGG+G+IGSH   +L++N  ++VI++DN     +  L   + +G      +  D+
Sbjct: 1   MRVLVTGGSGYIGSHTCVQLLQN-GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDI 59

Query: 91  TEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RI 142
               L+        +D + H A   +       P++    NV GTL ++   +       
Sbjct: 60  RNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNF 119

Query: 143 LLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-GIEIRIA 201
           + +S++ VYGD    P  ES+         +S Y + K + E ++ D  +      I + 
Sbjct: 120 IFSSSATVYGDQPKIPYVESFPTGTP----QSPYGKSKLMVEQILTDLQKAQPDWSIALL 175

Query: 202 RIFNTYGPRMNIDDG-------RVVSNFIAQAI--RGEPLTV------QAPGTQTRSFCY 246
           R FN  G   + D G         +  +IAQ    R + L +         GT  R + +
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235

Query: 247 VSDMVDGLIRLM----EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDD 302
           V D+ DG +  M            N+G     ++L++     +     V          D
Sbjct: 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGD 295

Query: 303 PRQRKPDITKATELLGWEPKIKLRDGL 329
                 D +KA   L W     L +  
Sbjct: 296 LPAYWADASKADRELNWRVTRTLDEMA 322

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (464), Expect = 1e-55
 Identities = 63/339 (18%), Positives = 118/339 (34%), Gaps = 47/339 (13%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLRKWIG---HPRFELIR 87
            L+TG  G  GS+L + L+E    EV  +      + TG  ++L K          +L  
Sbjct: 4   ALITGITGQDGSYLAEFLLEK-GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62

Query: 88  HDVTEPLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG- 139
            D+T+   +       +  +IY+L   +           T   + +GTL +L   K  G 
Sbjct: 63  GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122

Query: 140 ---ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGI 196
               +    STSE+YG     PQ E+      P   RS Y   K  A  ++ ++   + +
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKET-----TPFYPRSPYGAAKLYAYWIVVNFREAYNL 177

Query: 197 EIRIARIFNTYGPRMNIDDG--RVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGL 254
                 +FN   PR   +    ++  +     +              R + +  D V+ +
Sbjct: 178 FAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237

Query: 255 IRLMEGENTGPINIGNPGEFTM---------------------LELAENVKELINPNVEI 293
             +++ +      I      ++                            KE    +V +
Sbjct: 238 WLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTV 297

Query: 294 TMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLM 332
            +    P +    + D TKA + L W+P++   + +  M
Sbjct: 298 DLKYYRPTEVDFLQGDCTKAKQKLNWKPRVAFDELVREM 336

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  182 bits (461), Expect = 2e-55
 Identities = 60/315 (19%), Positives = 121/315 (38%), Gaps = 22/315 (6%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTE 92
             LVTG  G  G++L   L+E     V  +     + ++  LR+       +    D+ +
Sbjct: 2   SALVTGITGQDGAYLAKLLLEK-GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 93  PLLI-------EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARIL 143
              +       +  ++Y+LA  +        PV T   + +G  ++L   ++     R  
Sbjct: 61  ACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFY 120

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARI 203
             STSE++G      QDE+      P   RS Y   K     +  +Y    G+      +
Sbjct: 121 QASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGIL 175

Query: 204 FNTYGPRMNID-DGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGE 261
           FN   P   I+   R V++ +A+   G +           R + +  D V+ +  +++ +
Sbjct: 176 FNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235

Query: 262 NTGPINIGNPGEFTMLELAENVKELINPN----VEITMVENTPDDPRQRKPDITKATELL 317
                 +      T+ ++ +   E +  +    ++I      P +      +  KA  +L
Sbjct: 236 KADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVL 295

Query: 318 GWEPKIKLRDGLPLM 332
           GW+P+  L + + +M
Sbjct: 296 GWKPRTSLDELIRMM 310

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score =  181 bits (460), Expect = 3e-55
 Identities = 78/328 (23%), Positives = 128/328 (39%), Gaps = 33/328 (10%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTE 92
           ++L+TGG GF+GS+L    +     ++IV DN    G+ DNL        FE +  D+  
Sbjct: 2   KLLITGGCGFLGSNLASFALSQ-GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA--KRVGARIL 143
              +         D  +HLA   +      NP    + NV GTLN+L           I+
Sbjct: 61  KNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNII 120

Query: 144 LTSTSEVYGDPLVHPQDESYWGNVN-----------PIGVRSCYDEGKRVAETLMFDYHR 192
            +ST++VYGD   +  +E+                  +   S Y   K  A+  M DY R
Sbjct: 121 YSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYAR 180

Query: 193 QHGIEIRIARIFNTYGPRMNIDDGRVVSNFI------AQAIRGEPLTVQAPGTQTRSFCY 246
             G+   + R  + YG R      +    +        +    +P T+   G Q R   +
Sbjct: 181 IFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240

Query: 247 VSDMVDGLIRLMEGENTGP-----INIGNPGEFTMLELAENVKELINPNVEITMVENTPD 301
             DM+      +   +        I        ++LEL + +++  N ++  T +     
Sbjct: 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRES 300

Query: 302 DPRQRKPDITKATELLGWEPKIKLRDGL 329
           D R    DI K T  + W PK+  +DG+
Sbjct: 301 DQRVFVADIKKITNAIDWSPKVSAKDGV 328

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  181 bits (458), Expect = 7e-55
 Identities = 64/330 (19%), Positives = 121/330 (36%), Gaps = 37/330 (11%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTE 92
           +LVTGGAG+IGSH V +L+EN   + +V DN    + D++   + +          D+ +
Sbjct: 4   VLVTGGAGYIGSHTVVELIEN-GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCD 62

Query: 93  PLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT 145
              +E       +D + H A   +       P++    N++GT+ +L L ++      + 
Sbjct: 63  RKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVF 122

Query: 146 STS-EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR--QHGIEIRIAR 202
           S+S  VYGD    P          P+G  + Y   K   E ++ D +   +   +  I R
Sbjct: 123 SSSATVYGDATRFPNMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILR 181

Query: 203 IFNTYGPRMNIDDG--------RVVSNFIAQAI-RGEPLTVQAPGTQTRSFCYVSDMVDG 253
            FN  G   +   G         ++      A+ R E L +      +R    + D +  
Sbjct: 182 YFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHV 241

Query: 254 LIRLMEGENTGP--------------INIGNPGEFTMLELAENVKELINPNVEITMVENT 299
           +                          N+G+    T+ E+     +    ++   +    
Sbjct: 242 VDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR 301

Query: 300 PDDPRQRKPDITKATELLGWEPKIKLRDGL 329
             D         +A   L W+ ++++ D  
Sbjct: 302 AGDVLNLTAKPDRAKRELKWQTELQVEDSC 331

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (406), Expect = 4e-47
 Identities = 68/331 (20%), Positives = 121/331 (36%), Gaps = 39/331 (11%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--------KWIGHPRFEL 85
           ++LVTGGAG+IGSH V +L+E      +V+DN+    +            + +     E 
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEA-GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62

Query: 86  IRHDVTEPLLIEVDQI-------YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV 138
              D+ +   ++            H A   +       P+   + N+ GT+ +L + K  
Sbjct: 63  EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122

Query: 139 GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDY-HRQHGIE 197
           G + L+ S+S        +PQ           G  + Y + K   E ++ D         
Sbjct: 123 GVKNLVFSSSATVYG---NPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWN 179

Query: 198 IRIARIFNTYGPRMNIDDGR--------VVSNFIAQAI-RGEPLTV------QAPGTQTR 242
             + R FN  G   +   G         ++      AI R E L V         GT  R
Sbjct: 180 AVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVR 239

Query: 243 SFCYVSDMVDGLIRLM----EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVEN 298
            + +V D+  G I  +    E       N+G    +++L++ + +++     +   +V  
Sbjct: 240 DYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR 299

Query: 299 TPDDPRQRKPDITKATELLGWEPKIKLRDGL 329
              D      + + A E LGW   + L    
Sbjct: 300 REGDVAACYANPSLAQEELGWTAALGLDRMC 330

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score =  158 bits (399), Expect = 9e-46
 Identities = 68/367 (18%), Positives = 125/367 (34%), Gaps = 68/367 (18%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS------------------KD 72
           S+MR+LV GGAG+IGSH V  L+ +  + V++VD+                        D
Sbjct: 1   SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60

Query: 73  NLRKWIGHPRFELIRHDVTEPLLIE--------VDQIYHLACPASPIFYKYNPVKTIKTN 124
             +         L   DV     +         +D + H+    +      +P+K    N
Sbjct: 61  GPKPPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV---RSCYDEGKR 181
           V+G L +L          ++ S+S             +    ++        S Y E K 
Sbjct: 121 VVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKL 180

Query: 182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDG-------RVVSNFIAQAIR------ 228
           +AE ++ D    +GI+    R FN  G   + D G        ++   + + +       
Sbjct: 181 IAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240

Query: 229 ----------GEPLTV------QAPGTQTRSFCYVSDMVDGLIRL----------MEGEN 262
                      + + +         GT  R + +V D+    I             + + 
Sbjct: 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKY 300

Query: 263 TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK 322
               N+G    +++ E+ E  ++     + +        DP        KA E+LGW+PK
Sbjct: 301 FSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPK 360

Query: 323 IKLRDGL 329
               + +
Sbjct: 361 YDTLEAI 367

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  155 bits (392), Expect = 3e-45
 Identities = 59/324 (18%), Positives = 112/324 (34%), Gaps = 31/324 (9%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDN----YFTGSKDNLR---KWIGHPRFELI 86
             L+TG  G  GS+L + L+  +  EV  +      + T   +++      +     +L 
Sbjct: 3   IALITGITGQDGSYLTEFLLG-KGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 87  RHDVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 139
             D+T+   +         D++Y+LA  +        P  T      G L +L   +   
Sbjct: 62  YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121

Query: 140 AR-----ILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH 194
                      + S         PQ E+      P   RS Y   K  A     +Y   +
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSET-----TPFHPRSPYAASKCAAHWYTVNYREAY 176

Query: 195 GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD 252
           G+      +FN   PR   +    ++        +  +          +R + +  D V+
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236

Query: 253 GLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPN----VEITMVENTPDDPRQRKP 308
            +  +++ E      +      T+ E  +     +  N    VEI      P +    + 
Sbjct: 237 AMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQG 296

Query: 309 DITKATELLGWEPKIKLRDGLPLM 332
           D +KA E+LGW+P++     + +M
Sbjct: 297 DASKAKEVLGWKPQVGFEKLVKMM 320

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score =  130 bits (327), Expect = 9e-36
 Identities = 81/339 (23%), Positives = 140/339 (41%), Gaps = 38/339 (11%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT- 91
           MR+L+ G  GFIG+HL ++L+  +  EV  +D       D + +++ HP F  +  D++ 
Sbjct: 1   MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIG----SDAISRFLNHPHFHFVEGDISI 56

Query: 92  -----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
                E  + + D +  L   A+PI Y  NP++  + +    L ++    +   RI+  S
Sbjct: 57  HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 116

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGV--RSCYDEGKRVAETLMFDYHRQHGIEIRIARIF 204
           TSEVYG       DE +   +       R  Y   K++ + +++ Y  + G++  + R F
Sbjct: 117 TSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPF 176

Query: 205 NTYGPRMNID------DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM 258
           N  GPR++          R ++  I   + G P+ +   G Q R F  + D ++ L R++
Sbjct: 177 NWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII 236

Query: 259 EGENTGPIN-----IGNPGEFTMLELAENVKELINPNVEITMVENTP------------- 300
           E                  E ++ EL E +      +                       
Sbjct: 237 ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGK 296

Query: 301 --DDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
              D   RKP I  A   L WEPKI +++ +    D F 
Sbjct: 297 GYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 335

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score =  112 bits (279), Expect = 8e-29
 Identities = 53/334 (15%), Positives = 99/334 (29%), Gaps = 25/334 (7%)

Query: 26  SKFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFEL 85
           + F+Q   R+ VTG  GF G  L   L       V                       + 
Sbjct: 3   NSFWQ-GKRVFVTGHTGFKGGWLSLWLQTM-GATVKGYSLTAPTVPSLFETARVADGMQS 60

Query: 86  IRHDVTEPLLIEVDQ-------IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGL---- 134
              D+ +   +           ++H+A           PV+T  TNV+GT+ +L      
Sbjct: 61  EIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHV 120

Query: 135 AKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV---AETLMFDYH 191
                   + +       + +   ++    G  +P        E               +
Sbjct: 121 GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANY 180

Query: 192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV 251
            QHG  +   R  N  G      D R+V + +    + +P+ ++ P         +  + 
Sbjct: 181 GQHGTAVATVRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLS 239

Query: 252 DGLIRLMEGENTGPINIG-------NPGEFTMLELAENVKELINPNVEITMVENT-PDDP 303
             L+   +    G            +     +  + E + +         +  N  P + 
Sbjct: 240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEA 299

Query: 304 RQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR 337
              K D +KA   LGW P+  L   L  +    +
Sbjct: 300 HYLKLDCSKAKMQLGWHPRWNLNTTLEYIVGWHK 333

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (265), Expect = 3e-27
 Identities = 50/302 (16%), Positives = 93/302 (30%), Gaps = 11/302 (3%)

Query: 35  ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL 94
           I+VTGGAGFIGS++V  L +    +++VVDN   G+K      + +    + + D    +
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-NIADYMDKEDFLIQI 60

Query: 95  LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDP 154
           +   +     A                            L      R             
Sbjct: 61  MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE--IPFLYASSAA 118

Query: 155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID 214
               +   +  +       + Y   K + +  +     +   +I   R FN YGPR    
Sbjct: 119 TYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK 178

Query: 215 DGRVVSNFIAQAIRGEPLTVQAPG---TQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP 271
                  F          + +         R F YV D+ D  +  +E   +G  N+G  
Sbjct: 179 GSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTG 238

Query: 272 GEFTMLELAENVKELINPNVEITMVENT----PDDPRQRKPDITKATELLGWEPKIKLRD 327
              +   +A+      +   +I  +              + D+T        +P   + +
Sbjct: 239 RAESFQAVADATLA-YHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAE 297

Query: 328 GL 329
           G+
Sbjct: 298 GV 299

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  104 bits (259), Expect = 4e-26
 Identities = 42/323 (13%), Positives = 98/323 (30%), Gaps = 29/323 (8%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHP----RFELIRHD 89
            +LVTG  GF+ SH+V++L+E+         +       NL+K             +  D
Sbjct: 13  LVLVTGANGFVASHVVEQLLEHGYKVRGTARS--ASKLANLQKRWDAKYPGRFETAVVED 70

Query: 90  VTEPLLIE--VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           + +    +  +     +A  AS + +     + +   + GTLN L  A    +      T
Sbjct: 71  MLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLT 130

Query: 148 SEVYGDPLVHPQDESYWGNV-----------------NPIGVRSCYDEGKRVAETLMFDY 190
           S      +  P  E  + +                  +P      Y   K  AE   + +
Sbjct: 131 SSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKF 190

Query: 191 HRQHGIEIRIARIFNT--YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS 248
             ++     +  +      G   + +     ++    ++    ++        + +    
Sbjct: 191 MDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAV 250

Query: 249 DMVDGLIRLME-GENTGPINIGNPGEFTMLELAENVKELI-NPNVEITMVENTPDDPRQR 306
           D+    +  +   +       G  G F    +    ++L  +        +   D  +  
Sbjct: 251 DIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFD 310

Query: 307 KPDITKATELLGWEPKIKLRDGL 329
                +  + LG      + + +
Sbjct: 311 TAPSLEILKSLGRPGWRSIEESI 333

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 95.0 bits (234), Expect = 2e-22
 Identities = 71/366 (19%), Positives = 109/366 (29%), Gaps = 63/366 (17%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----------------- 75
            R++V GG G+ G      L +    EV +VDN      D+                   
Sbjct: 2   SRVMVIGGDGYCGWATALHLSKK-NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 76  -KWIGHPRFELIRHDVTEPLLIE----------VDQIYHLACPASPIFYKYNPVKTIKTN 124
            K +     EL   D+ +   +           V            +  +   V T   N
Sbjct: 61  WKALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNN 120

Query: 125 VIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNV----------NPIGVRS 174
           VIGTLN+L   K  G    L     +      +   E  +  +           P    S
Sbjct: 121 VIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASS 180

Query: 175 CYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---------------GRVV 219
            Y   K      +    +  GI          YG + +  +               G  +
Sbjct: 181 FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240

Query: 220 SNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI---NIGNPGEFTM 276
           + F  QA  G PLTV   G QTR +  + D V  +   +                 +F++
Sbjct: 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSV 300

Query: 277 LELAENVKEL---INPNVEITMVENT--PDDPRQRKPDITKATELLGWEPKIKLRDGLPL 331
            ELA  V +    +  +V+   V N     +        TK  E LG EP       L  
Sbjct: 301 NELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDS 359

Query: 332 MEDDFR 337
           + +   
Sbjct: 360 LLNFAV 365

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 90.7 bits (223), Expect = 2e-21
 Identities = 48/313 (15%), Positives = 99/313 (31%), Gaps = 40/313 (12%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT--GSKDNLRKWIGHPRFELIRHDV 90
           M+IL+TG  G +G  +  +L + +  EVI  D       +   + K+    +        
Sbjct: 2   MKILITGANGQLGREIQKQL-KGKNVEVIPTDVQDLDITNVLAVNKFFNEKKP------- 53

Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV 150
                   + + + A   +    +       K N IG  N+   A  VGA I+  ST  V
Sbjct: 54  --------NVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV 105

Query: 151 YGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPR 210
           +      P  E    N      ++  +            + +    +  I R    YG  
Sbjct: 106 FDGEAKEPITEFDEVNPQSAYGKTKLEGEN---------FVKALNPKYYIVRTAWLYGDG 156

Query: 211 MNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN 270
            N     +        ++           Q  +     D+   ++++++ +N G  +   
Sbjct: 157 NNFVKTMINLGKTHDELKV-------VHDQVGTPTSTVDLARVVLKVIDEKNYGTFHCTC 209

Query: 271 PGEFTMLELAENVKELINPNVEITMVENTPDD-----PRQRKPDITKATELLGWEPKIKL 325
            G  +  + A  +  L   +V++T             P+             G   + + 
Sbjct: 210 KGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EW 268

Query: 326 RDGLPLMEDDFRL 338
           ++ L    D  ++
Sbjct: 269 KESLKEYIDLLQM 281

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 84.1 bits (206), Expect = 5e-19
 Identities = 27/273 (9%), Positives = 71/273 (26%), Gaps = 31/273 (11%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS---KDNLRKWIGHPRFELI 86
               R+L+ GG G+IG  +V+  +    +   V+      S   K  +  +      +LI
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASIS-LGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 59

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
              + +   +           ++      +     +  +     +  + +    +  L S
Sbjct: 60  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKL-----VEAIKEAGNIKRFLPS 114

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
              +  D + H                        + +  +        I          
Sbjct: 115 EFGMDPDIMEHALQPGSI---------------TFIDKRKVRRAIEAASIPYTYVSSNMF 159

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP- 265
            G       G +           + + +   G     +    D+    I+ ++   T   
Sbjct: 160 AGYF----AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNK 215

Query: 266 --INIGNPGEFTMLELAENVKELINPNVEITMV 296
                      +  E+ +  + L   N++   +
Sbjct: 216 TMYIRPPMNILSQKEVIQIWERLSEQNLDKIYI 248

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 83.7 bits (205), Expect = 6e-19
 Identities = 29/273 (10%), Positives = 71/273 (26%), Gaps = 38/273 (13%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR----KWIGHPRFELI 86
           S  RIL+ G  G+IG H+    ++   +   ++    T S ++ +    +        ++
Sbjct: 2   SRSRILLIGATGYIGRHVAKASLDL-GHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
              + +   +           ++    +      I                  A   + +
Sbjct: 61  HGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIK----------------AIKEVGT 104

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
               +     +  D  +                       +       GI          
Sbjct: 105 VKRFFPSEFGNDVDNVHAVEPAKSVFEVKAK---------VRRAIEAEGIPYTYVSSNCF 155

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG-- 264
            G  +     R ++     A   + + +   G     F    D+    I+ ++   T   
Sbjct: 156 AGYFL-----RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNK 210

Query: 265 -PINIGNPGEFTMLELAENVKELINPNVEITMV 296
                      ++ EL    ++ I+  +E   V
Sbjct: 211 TLYLRLPANTLSLNELVALWEKKIDKTLEKAYV 243

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 70.6 bits (171), Expect = 1e-14
 Identities = 36/262 (13%), Positives = 73/262 (27%), Gaps = 20/262 (7%)

Query: 31  SNM-RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRH 88
           +N+  +LVTG +G  G  +  KL E   ++ +      +    + +         ++   
Sbjct: 1   ANLPTVLVTGASGRTGQIVYKKLKEG-SDKFVAKGLVRSAQGKEKIGGEADVFIGDITDA 59

Query: 89  DVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS 148
           D   P    +D +  L      +   ++P K  +   I              +      +
Sbjct: 60  DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119

Query: 149 EVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYG 208
           +V G         S  G      +    +    V +     Y    G    I R      
Sbjct: 120 KVAGVK-HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLD 178

Query: 209 PRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG--PI 266
                  G V    + +                      +D+ +  I+ +  E       
Sbjct: 179 KE-----GGVRELLVGKD--------DELLQTDTKTVPRADVAEVCIQALLFEEAKNKAF 225

Query: 267 NIGNPGEFTMLELAENVKELIN 288
           ++G+  E T     +  K L +
Sbjct: 226 DLGSKPEGTSTPTKD-FKALFS 246

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 71.5 bits (173), Expect = 1e-14
 Identities = 43/319 (13%), Positives = 87/319 (27%), Gaps = 43/319 (13%)

Query: 33  MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE 92
           M IL+ G  G +G  L   L       +I +D +      +          + +   V +
Sbjct: 1   MNILLFGKTGQVGWELQRSL--APVGNLIALDVHSKEFCGDFSN------PKGVAETVRK 52

Query: 93  PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG 152
              +  D I + A   +    +  P      N      +   A   GA ++  ST  V+ 
Sbjct: 53  ---LRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109

Query: 153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN 212
                P  E+   +   +  ++     K          +    +  R + ++   G    
Sbjct: 110 GTGDIPWQETDATSPLNVYGKTKLAGEK------ALQDNCPKHLIFRTSWVYAGKGNNFA 163

Query: 213 IDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR-----LMEGENTGPIN 267
               R+              T+     Q  +      + D         L + E  G  +
Sbjct: 164 KTMLRLAKERQ---------TLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYH 214

Query: 268 IGNPGEFTMLELAE---NVKELINPNVEITMVENTPDD--------PRQRKPDITKATEL 316
           +   G  T  + A    +        + +T +   P          P   + +  K    
Sbjct: 215 LVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRN 274

Query: 317 LGWEPKIKLRDGLPLMEDD 335
                  +   G+  M  +
Sbjct: 275 FDLILP-QWELGVKRMLTE 292

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.3 bits (155), Expect = 8e-13
 Identities = 26/234 (11%), Positives = 61/234 (26%), Gaps = 42/234 (17%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
           +  +I + G  G  G   + + ++    EV V+    +       +       ++++   
Sbjct: 2   AVKKIAIFGATGQTGLTTLAQAVQ-AGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAAD 60

Query: 91  TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE 149
            +  +   D +  L           N +        G  N++   K  G   ++  +++ 
Sbjct: 61  VDKTVAGQDAVIVLLGTR-------NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113

Query: 150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGP 209
           +  DP   P       +                    M    R+ G++            
Sbjct: 114 LLWDPTKVPPRLQAVTD----------------DHIRMHKVLRESGLKYVAVMP------ 151

Query: 210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENT 263
                        I         TV   G          D+   ++R +  +  
Sbjct: 152 -----------PHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 58.5 bits (140), Expect = 3e-10
 Identities = 31/282 (10%), Positives = 67/282 (23%), Gaps = 30/282 (10%)

Query: 30  QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHD 89
           Q    I V G  G  G+ L+        +    V +          +    P   L +  
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHS---LKGLIAEELQAIPNVTLFQGP 57

Query: 90  VTEP--LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
           +     L+  + +  HLA   +               +    ++   AKR G        
Sbjct: 58  LLNNVPLMDTLFEGAHLAFINTTSQAGD--------EIAIGKDLADAAKRAGT------- 102

Query: 148 SEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTY 207
                   +     S   + +  G                +            A I+N  
Sbjct: 103 --------IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNNN 154

Query: 208 GPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPIN 267
              +     ++            P     P     +   V   +  + +    +  G   
Sbjct: 155 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI 214

Query: 268 IGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPD 309
                  + +++       +  N  +T V+    + +   P 
Sbjct: 215 ALTFETLSPVQVCAAFSRAL--NRRVTYVQVPKVEIKVNIPV 254

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 1e-08
 Identities = 24/255 (9%), Positives = 64/255 (25%), Gaps = 32/255 (12%)

Query: 27  KFFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELI 86
            F   N  + + G +G  G  L+ +++E      + +                  R +L 
Sbjct: 9   DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIG----------------RRKLT 52

Query: 87  RHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTS 146
             +     + +    +      +  F  ++          G     G  +     +L ++
Sbjct: 53  FDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSA 112

Query: 147 TSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 206
                G         S   + +       Y + K   E  + +          + R    
Sbjct: 113 ELAKAGGCKHFNLLSSKGADKSS---NFLYLQVKGEVEAKVEELKFDRYS---VFRPGVL 166

Query: 207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPI 266
              R     G  +      ++             +     V  +V  ++  +       +
Sbjct: 167 LCDRQESRPGEWLVRKFFGSLPD--------SWASGHSVPVVTVVRAMLNNVVRPRDKQM 218

Query: 267 NIGNPGEFTMLELAE 281
            +       + +L +
Sbjct: 219 ELLENKA--IHDLGK 231

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.2 bits (113), Expect = 3e-07
 Identities = 30/237 (12%), Positives = 66/237 (27%), Gaps = 38/237 (16%)

Query: 34  RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP 93
           R+L+ G  G  G HL+D+++       ++       ++  L +            ++   
Sbjct: 4   RVLLAGATGLTGEHLLDRILSEPTLAKVIAP-----ARKALAEHPRLDNPVGPLAELLPQ 58

Query: 94  LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGD 153
           L   +D  +                + +  ++   +                        
Sbjct: 59  LDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGK-----------------RALEM 101

Query: 154 PLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 213
              H    S  G      +     +G+         + +       IAR    +GPR   
Sbjct: 102 GARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLT-----IARPSLLFGPREEF 156

Query: 214 DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGN 270
               +++  IA+ + G+   +              D+   L RL   E  G   + +
Sbjct: 157 RLAEILAAPIARILPGKYHGI-----------EACDLARALWRLALEEGKGVRFVES 202

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 8/116 (6%), Positives = 23/116 (19%), Gaps = 6/116 (5%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV 90
              + +V  G G +G      L       V+         +          +  +   + 
Sbjct: 22  KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKA-QAAADSVNKRFKVNVTAAET 80

Query: 91  T-----EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 141
                    +     ++        +  +          ++   N        G  
Sbjct: 81  ADDASRAEAVKGAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIGGID 136

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.2 bits (82), Expect = 0.002
 Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 31  SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHD 89
           +   +L+  G+GF+    +D L ++   +V V       +K          P    +  D
Sbjct: 1   ATKSVLM-LGSGFVTRPTLDVLTDS-GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD 58

Query: 90  VTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTL----NMLGLAKRVGA----- 140
                 +    +     P +            K +V+ T      M+ L +         
Sbjct: 59  AALDAEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITV 118

Query: 141 --RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEI 198
              I  ++ +++ G P          G ++  GV +      ++ + LM +   ++GIE 
Sbjct: 119 MNEIGYSAMAKLVGVPCAVAVKFVLDGTISDRGVLAP--MNSKINDPLMKELKEKYGIEC 176

Query: 199 R 199
           +
Sbjct: 177 K 177

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	346
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	100.0
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	100.0
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.95
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.95
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.94
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.88
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.82
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.8
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.8
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.8
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.8
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.8
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.8
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.8
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.8
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.79
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.79
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.79
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.79
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.79
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.78
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.78
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.78
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.78
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.78
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.77
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.77
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.76
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.76
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.76
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.76
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.76
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.76
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.75
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.75
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.75
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.75
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.74
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.74
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.74
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.73
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.73
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.73
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.73
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.71
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.71
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.71
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.71
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.71
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.71
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.7
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.69
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.68
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.68
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.67
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.66
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.65
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.64
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.64
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.62
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.62
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.62
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.61
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.59
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.55
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.53
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.51
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.5
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.49
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.48
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.37
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.35
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.93
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.26
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.26
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.23
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.21
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.15
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.08
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.06
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.05
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.01
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.93
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.92
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.91
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.91
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.88
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.85
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.79
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.75
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.73
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.72
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.66
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.65
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.62
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.61
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.6
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.59
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.59
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.59
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.58
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.56
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.5
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.49
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	97.49
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.47
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.45
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.42
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.42
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.34
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.29
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.24
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.12
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.08
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.02
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	96.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	96.9
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.86
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.83
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.78
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	96.77
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.75
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.73
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.72
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.7
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.66
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.66
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	96.64
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.5
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	96.46
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.42
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.36
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.36
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.31
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.31
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.29
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.26
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	96.14
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.12
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.11
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.0
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	95.95
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.94
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	95.83
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	95.83
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.8
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.72
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.7
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	95.66
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.64
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.53
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.34
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.32
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.24
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.23
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	95.21
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	95.2
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.15
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.13
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.09
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.07
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.01
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.01
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	94.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	94.93
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	94.91
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.89
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.89
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	94.84
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.8
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.78
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.74
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.6
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	94.42
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.38
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.36
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.24
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.22
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	94.04
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.97
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.96
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	93.94
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.93
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	93.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	93.81
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.74
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	93.71
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.71
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.68
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.66
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.65
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.56
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.49
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.43
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	93.25
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.0
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	92.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.93
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	92.92
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.8
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.64
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.63
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.54
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.53
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	92.33
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.32
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.07
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	91.9
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.87
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.84
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.52
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	91.48
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.14
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.1
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	91.09
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.09
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	91.08
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.85
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.85
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.82
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	90.69
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	90.5
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.36
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.34
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	90.28
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.15
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.06
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.9
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	89.87
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.71
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	89.68
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.52
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.43
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	89.33
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	89.17
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.09
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	88.97
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.89
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	88.65
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	88.45
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.35
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	87.77
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.76
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	87.71
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	87.34
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	87.11
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.03
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.87
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.52
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	86.27
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	86.14
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	86.1
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.95
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	85.87
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	85.3
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	85.05
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	84.78
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	84.57
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	84.39
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.61
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	82.94
d1m3sa_	186	Hypothetical protein YckF {Bacillus subtilis [TaxI	82.69
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.14
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	81.8
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	81.31
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	80.97
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	80.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	80.17

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-54  Score=381.22  Aligned_cols=309  Identities=64%  Similarity=1.093  Sum_probs=282.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      .|||||||||||||++|+++|+++| ++|++++|........+........+++...|+.+....++|+|||+|+..+..
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~   79 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPP   79 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCch
Confidence            4799999999999999999999999 999999986655666666666667889999999988888999999999987765


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHH
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYH  191 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~  191 (346)
                      ....++...+++|+.++.+++++|++.++|+||+||..|||.....+.+|+.+...+|..|.+.|+.+|.++|.+++.++
T Consensus        80 ~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~  159 (312)
T d2b69a1          80 NYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM  159 (312)
T ss_dssp             HHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHH
T ss_pred             hHHhCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence            66788999999999999999999999999999999999999888888888877776788899999999999999999999


Q ss_pred             HHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecCC
Q 019060          192 RQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP  271 (346)
Q Consensus       192 ~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~~  271 (346)
                      +.++++++++||+++|||+.......+++.++.++..|+++.+++++...++|+|++|+|++++.+++....+.||++++
T Consensus       160 ~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~~~~n~~~~  239 (312)
T d2b69a1         160 KQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNP  239 (312)
T ss_dssp             HHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCCSCEEESCC
T ss_pred             HHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccCCceEecCC
Confidence            99999999999999999988776677899999999999999999999999999999999999999998888999999999


Q ss_pred             CCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          272 GEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       272 ~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +.+++.++++.+.+.+|.+.++...+..+.......+|++|+++.|||+|+++++++|+++++||+++++
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw~p~~~l~~~I~~~i~w~~~~~~  309 (312)
T d2b69a1         240 EEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE  309 (312)
T ss_dssp             CEEEHHHHHHHHHHHHTCCCCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhHHHHHHHHhCCCCceEECCCCCCCCCeeeECHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999998888877777777888999999999999999999999999999988764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=5.3e-50  Score=354.81  Aligned_cols=301  Identities=29%  Similarity=0.427  Sum_probs=260.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe------EEEEeCCC-CCCcchhhhhcCCCCeeEEecccCCcc-----cCCCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE------VIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~------V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~  100 (346)
                      |||||||||||||++|+++|+++| +.      |+.+++.. ......+.......++.++.+|+.+..     ...+|.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g-~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~   79 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGA-YPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDA   79 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTS-CTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCC-CCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccce
Confidence            799999999999999999999998 64      45554432 223333334445568999999998864     337999


Q ss_pred             EEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHh
Q 019060          101 IYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEG  179 (346)
Q Consensus       101 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s  179 (346)
                      |+|+|+.........++...++.|+.++.+++++|++.++ +|||+||..+||.....+.+|+     ++..|.+.|+.+
T Consensus        80 vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~-----~~~~p~~~Y~~s  154 (322)
T d1r6da_          80 IVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTES-----SPLEPNSPYAAS  154 (322)
T ss_dssp             EEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTT-----SCCCCCSHHHHH
T ss_pred             EEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCC-----CCCCCCCHHHHH
Confidence            9999988776667788889999999999999999999987 8999999999998888888888     688888999999


Q ss_pred             HHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHh
Q 019060          180 KRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLME  259 (346)
Q Consensus       180 K~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~  259 (346)
                      |.++|.+++.++++++++++++||+++|||+...  ..+++.++.++..++++.+++++++.++|+|++|+|+++..+++
T Consensus       155 K~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~  232 (322)
T d1r6da_         155 KAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLA  232 (322)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCc--CcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHh
Confidence            9999999999999999999999999999997543  46889999999999999999999999999999999999999999


Q ss_pred             CCC-CCcEEecCCCCCCHHHHHHHHHHHcCCCcce-EEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          260 GEN-TGPINIGNPGEFTMLELAENVKELINPNVEI-TMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       260 ~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      ++. +++||+++++++++.|+++.+.+.+|.+... ......+.......+|++|+++.|||+|+++++|+|+++++||+
T Consensus       233 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~~~~eegI~~~i~w~~  312 (322)
T d1r6da_         233 GGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYR  312 (322)
T ss_dssp             HCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHH
T ss_pred             CCCCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecCCCCCCCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence            877 6699999999999999999999999988654 44455556666778999999999999999999999999999998


Q ss_pred             Hhhc
Q 019060          338 LRLA  341 (346)
Q Consensus       338 ~~~~  341 (346)
                      ++..
T Consensus       313 ~n~~  316 (322)
T d1r6da_         313 ENRG  316 (322)
T ss_dssp             HCHH
T ss_pred             HhHH
Confidence            7653

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=8.2e-49  Score=351.99  Aligned_cols=305  Identities=27%  Similarity=0.432  Sum_probs=254.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCe-EEEEeCCC-CCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNE-VIVVDNYF-TGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~-V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |||||||||||||++|+++|++.| ++ |.++++.. ......+..+...++++++.+|+++...+       ++|+|||
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g-~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNT-QDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHC-SCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            799999999999999999999999 65 45555432 23334455556667899999999987543       6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC----------CeEEEEecccccCCCCCCCCCCC-----CcCCCC
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG----------ARILLTSTSEVYGDPLVHPQDES-----YWGNVN  168 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----------~r~i~~SS~~v~~~~~~~~~~e~-----~~~~~~  168 (346)
                      +|+..+......++...++.|+.++.+++++|++.+          .+|||+||..+||.....+..|.     .....+
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            999877666778899999999999999999998753          27999999999997654433322     122335


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      +..|.+.||.+|.++|.++..+++.++++++++||+++|||+...  ..+++.++.++..|+++.+++++++.++|+|++
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~  237 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE  237 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHH
Confidence            677889999999999999999999999999999999999997543  468899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC--------CcceEEccCCCCCCCcccCChHHHHhhcCC
Q 019060          249 DMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP--------NVEITMVENTPDDPRQRKPDITKATELLGW  319 (346)
Q Consensus       249 Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~--------~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~  319 (346)
                      |+|+++..++++.. +++||+++++.+++.|+++.+.+.++.        ...+...+..+.......+|++|++++|||
T Consensus       238 D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgw  317 (361)
T d1kewa_         238 DHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGW  317 (361)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHHCC
T ss_pred             HHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHHCC
Confidence            99999999998776 679999999999999999999987742        234555555666667788899999999999


Q ss_pred             cccccHHhHHHHHHHHHHHhh
Q 019060          320 EPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       320 ~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +|+++++|+|+++++||+++.
T Consensus       318 ~P~~~l~e~i~~ti~w~~~n~  338 (361)
T d1kewa_         318 KPLETFESGIRKTVEWYLANT  338 (361)
T ss_dssp             CCSCCHHHHHHHHHHHHHHCH
T ss_pred             CCCCCHHHHHHHHHHHHHHhH
Confidence            999999999999999997763

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.4e-49  Score=351.34  Aligned_cols=303  Identities=23%  Similarity=0.277  Sum_probs=243.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhh-----hhcCCCCeeEEecccCCcccC-------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLR-----KWIGHPRFELIRHDVTEPLLI-------EVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~-----~~~~~~~~~~~~~d~~~~~~~-------~~d   99 (346)
                      |+|||||||||||++|+++|++.| ++|++++|..... ...+.     .....+++.++++|+.|....       ++|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKG-YEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            689999999999999999999999 9999999853221 11111     112345899999999987644       689


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      +|||+|+..+......++...++.|+.++.+|+++|++.++    ||||+||..|||.+...+.+|+     ++..|.++
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~-----~~~~P~~~  155 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKET-----TPFYPRSP  155 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTT-----SCCCCCSH
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCC-----CCCCCCCh
Confidence            99999998877677889999999999999999999998764    6999999999998878888998     67788899


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCC-eEEecCCcceeecccHHHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEP-LTVQAPGTQTRSFCYVSDMVDG  253 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~v~Dva~~  253 (346)
                      |+.+|.++|.+++.+++.++++++++||+++|||+..... ...+...+.....++. ....++++..++++|++|+|++
T Consensus       156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a  235 (357)
T d1db3a_         156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM  235 (357)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHH
Confidence            9999999999999999999999999999999999765432 2345555555555544 5566888999999999999999


Q ss_pred             HHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc-------------------------------CCCCC
Q 019060          254 LIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVE-------------------------------NTPDD  302 (346)
Q Consensus       254 i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~-------------------------------~~~~~  302 (346)
                      +..++++...+.||+++++.+|+.|+++.+.+.+|....+...+                               ..+..
T Consensus       236 ~~~~~~~~~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  315 (357)
T d1db3a_         236 QWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAE  315 (357)
T ss_dssp             HHHTTSSSSCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC
T ss_pred             HHHHHhCCCCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcc
Confidence            99999887789999999999999999999999998543321100                               01122


Q ss_pred             CCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          303 PRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       303 ~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      .....+|++|++++|||+|+++++|+|+++++++.+..+
T Consensus       316 ~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~~l~~~k  354 (357)
T d1db3a_         316 VETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAK  354 (357)
T ss_dssp             -CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHHHHh
Confidence            334567999999999999999999999999998777544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.9e-47  Score=340.97  Aligned_cols=305  Identities=27%  Similarity=0.364  Sum_probs=259.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh------cCCCCeeEEecccCCccc-----CCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW------IGHPRFELIRHDVTEPLL-----IEVD   99 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~-----~~~d   99 (346)
                      +.|+|||||||||||++|+++|+++| |+|++++|............      ...++++++.+|+.|...     ..++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            45799999999999999999999999 99999998544333322111      123578999999998643     3699


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHH
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      .|+|+++.........++...++.|+.++.+++++|++.++ +|||+||..+||.....+.+|+     ++..|.+.|+.
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~p~~~Y~~  168 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVED-----TIGKPLSPYAV  168 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTT-----CCCCCCSHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCC-----CCCCCCCcchH
Confidence            99999987766667788999999999999999999999998 9999999999998888888888     67788899999


Q ss_pred             hHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          179 GKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       179 sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      +|.++|.++..+++..+++++++||+++||++..+..  ..++..++..++.|+++.+++++...++|+|++|+|.++..
T Consensus       169 sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~  248 (341)
T d1sb8a_         169 TKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLL  248 (341)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhh
Confidence            9999999999999999999999999999999876543  46788899999999999999999999999999999999999


Q ss_pred             HHhCCC---CCcEEecCCCCCCHHHHHHHHHHHcCCCc-----ceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhH
Q 019060          257 LMEGEN---TGPINIGNPGEFTMLELAENVKELINPNV-----EITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDG  328 (346)
Q Consensus       257 ~~~~~~---~~~~~~~~~~~~s~~ei~~~i~~~~g~~~-----~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~  328 (346)
                      ++....   ++.|++++++.+|+.|+++.+.+.++.+.     .....+..+........|++|+++.|||+|+++++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~p~~sl~~g  328 (341)
T d1sb8a_         249 AATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAG  328 (341)
T ss_dssp             HHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCCCCHHHH
T ss_pred             hhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCCCcCeeeeCHHHHHHHHCCCcCCCHHHH
Confidence            887654   56899999999999999999999997442     2223333444555677899999999999999999999


Q ss_pred             HHHHHHHHHHhhc
Q 019060          329 LPLMEDDFRLRLA  341 (346)
Q Consensus       329 i~~~~~~~~~~~~  341 (346)
                      |+++++||++.++
T Consensus       329 i~~ti~wy~~~~k  341 (341)
T d1sb8a_         329 VALAMPWYIMFLK  341 (341)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999998654

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.8e-46  Score=334.17  Aligned_cols=303  Identities=24%  Similarity=0.340  Sum_probs=249.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhh--hhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |||||||||||||++|+++|+++| ++|++++|..........  +.....++.++++|+.|...+       ++|+|||
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViH   79 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNG-HDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIH   79 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            799999999999999999999999 999999885443333322  223446899999999997542       6999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      +|+.........++...+++|+.++.+++++|++.++ +||++||..+|+.....+..|..    .+..|...|+.+|.+
T Consensus        80 lAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~----~~~~p~~~Y~~sK~~  155 (338)
T d1udca_          80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESF----PTGTPQSPYGKSKLM  155 (338)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS----CCCCCSSHHHHHHHH
T ss_pred             CCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEcccccccccccc----ccCCCcchHHHHHhh
Confidence            9997765666678999999999999999999999998 89999999999876655555542    355678899999999


Q ss_pred             HHHHHHHHHHH-hCCceEEEEeccccCCCCCCCC--------ccHHHHHHHHHHcC-CCeEEecC------Ccceeeccc
Q 019060          183 AETLMFDYHRQ-HGIEIRIARIFNTYGPRMNIDD--------GRVVSNFIAQAIRG-EPLTVQAP------GTQTRSFCY  246 (346)
Q Consensus       183 ~E~~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~v~  246 (346)
                      +|.++..+... .+++++++|++++|||+.....        ..+++.++.....+ .++.+.++      +...++|+|
T Consensus       156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~  235 (338)
T d1udca_         156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH  235 (338)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred             hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence            99999876655 4789999999999998654221        34667777666554 45666554      567789999


Q ss_pred             HHHHHHHHHHHHhCC---C-CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCccc
Q 019060          247 VSDMVDGLIRLMEGE---N-TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPK  322 (346)
Q Consensus       247 v~Dva~~i~~~~~~~---~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~  322 (346)
                      +.|++.++..+....   . .++||+++++++|+.|+++.+.+.+|.+.++.+.+..+.......+|++|+++.|||+|+
T Consensus       236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lgwkp~  315 (338)
T d1udca_         236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVT  315 (338)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHHCCCCC
T ss_pred             EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHHCCCcC
Confidence            999998887766432   2 568999999999999999999999999999988887777777788999999999999999


Q ss_pred             ccHHhHHHHHHHHHHHhh
Q 019060          323 IKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       323 ~~~~e~i~~~~~~~~~~~  340 (346)
                      ++++|+|+++++||+++.
T Consensus       316 ~~l~egi~~ti~w~~~~~  333 (338)
T d1udca_         316 RTLDEMAQDTWHWQSRHP  333 (338)
T ss_dssp             CCHHHHHHHHHHHHHHCT
T ss_pred             CCHHHHHHHHHHHHHhch
Confidence            999999999999998763

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.9e-46  Score=333.92  Aligned_cols=306  Identities=24%  Similarity=0.308  Sum_probs=250.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC--CCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY--FTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      +|+|||||||||||++|+++|+++| +.|.++.+.  ...............+++++.+|+.|...     .++|.|+|+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g-~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCC-CCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            6899999999999999999999999 765555442  22222222222334689999999998754     369999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCC---C----CCCCCCCcCCCCCCCCCCchH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPL---V----HPQDESYWGNVNPIGVRSCYD  177 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~---~----~~~~e~~~~~~~~~~~~~~Y~  177 (346)
                      |+.........++...++.|+.++.+++++++..+.++|++||..+||...   .    .......+...++..|.+.||
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~  160 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS  160 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence            988776666788999999999999999999999999999999999997421   0    011111222335777889999


Q ss_pred             HhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHH
Q 019060          178 EGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRL  257 (346)
Q Consensus       178 ~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~  257 (346)
                      .+|.++|.+++.+++..+++++++||+++|||+..  ....+..++.....+..+.++++++..++|+|++|+|++++.+
T Consensus       161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~--~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~  238 (346)
T d1oc2a_         161 STKAASDLIVKAWVRSFGVKATISNCSNNYGPYQH--IEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI  238 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCC--TTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCC--ccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence            99999999999999999999999999999999754  2456777888888899999999999999999999999999999


Q ss_pred             HhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCCC-cceEEccCCCCCCCcccCChHHHHhhcCCcccc-cHHhHHHHHHH
Q 019060          258 MEGEN-TGPINIGNPGEFTMLELAENVKELINPN-VEITMVENTPDDPRQRKPDITKATELLGWEPKI-KLRDGLPLMED  334 (346)
Q Consensus       258 ~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~-~~~e~i~~~~~  334 (346)
                      +.++. ++.|++.+++..++.++++.+.+.++.. ..+...+..+.......+|++|++++|||+|++ +|+|+|+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~LGw~P~~t~l~e~i~~ti~  318 (346)
T d1oc2a_         239 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGLEETIQ  318 (346)
T ss_dssp             HHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHHCCCCSCCCHHHHHHHHHH
T ss_pred             HhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHHCCCCcCCCHHHHHHHHHH
Confidence            88777 7789999999999999999999999875 445666666666667788999999999999987 69999999999


Q ss_pred             HHHHhh
Q 019060          335 DFRLRL  340 (346)
Q Consensus       335 ~~~~~~  340 (346)
                      ||+++.
T Consensus       319 w~~~n~  324 (346)
T d1oc2a_         319 WYTDNQ  324 (346)
T ss_dssp             HHHHTH
T ss_pred             HHHHHH
Confidence            998753

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=9.7e-46  Score=332.74  Aligned_cols=304  Identities=24%  Similarity=0.350  Sum_probs=250.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-----cCCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~d~vi~~a  105 (346)
                      ++|||||||||||||++|+++|+++| |+|++++|........   .  ....++..+|+.+..     ..++|+|||+|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g-~~V~~~d~~~~~~~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a   87 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTE---D--MFCDEFHLVDLRVMENCLKVTEGVDHVFNLA   87 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCSSSCG---G--GTCSEEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEeCCCccchhh---h--cccCcEEEeechhHHHHHHHhhcCCeEeecc
Confidence            58999999999999999999999999 9999998754332211   1  134577888888763     23799999999


Q ss_pred             cCCCcccc-ccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCc--CCCCCCCCCCchHHhHH
Q 019060          106 CPASPIFY-KYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYW--GNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       106 ~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~--~~~~~~~~~~~Y~~sK~  181 (346)
                      +....... ...+......|+.++.+++++|++.++ |||++||..+|+.....+.+|...  .+..+..|.+.|+.+|.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~  167 (363)
T d2c5aa1          88 ADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL  167 (363)
T ss_dssp             CCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred             cccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHH
Confidence            87654333 567888889999999999999999998 899999999999766665555432  23356778899999999


Q ss_pred             HHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC---ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHH
Q 019060          182 VAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       182 ~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      ++|++++.+.+..+++++++||+++|||+.....   ...................++++.+.++|+|++|++++++.++
T Consensus       168 ~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~  247 (363)
T d2c5aa1         168 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT  247 (363)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHH
Confidence            9999999999999999999999999999754332   2233444455566777888888999999999999999999999


Q ss_pred             hCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHH
Q 019060          259 EGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       259 ~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~  338 (346)
                      +.+..++||+++++.+|+.|+++++.+.+|.+.++...+... ......+|++|+++.|||+|+++++|+|+++++||++
T Consensus       248 ~~~~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~-~~~~~~~d~ska~~~LGw~p~~sleegi~~ti~w~~~  326 (363)
T d2c5aa1         248 KSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-GVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKE  326 (363)
T ss_dssp             HSSCCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-CCSBCEECCHHHHHHHSCCCCCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCC-CccccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence            988899999999999999999999999999988887766443 4455678999999999999999999999999999987


Q ss_pred             hhc
Q 019060          339 RLA  341 (346)
Q Consensus       339 ~~~  341 (346)
                      +..
T Consensus       327 ~~~  329 (363)
T d2c5aa1         327 QIE  329 (363)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            743

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=6.2e-46  Score=328.45  Aligned_cols=303  Identities=20%  Similarity=0.248  Sum_probs=251.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc-chhhhhcCCCCeeEEecccCCcccC-------CCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~  104 (346)
                      |+|||||||||||++|+++|+++| |+|++++|...... ..+......+++.++.+|+.+....       .+++++|+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g-~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKG-YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCc-CEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            689999999999999999999999 99999998654322 3333333456899999999987543       58899999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |+.........++...+..|+.++.+++++|++.++  +|+++||..+|+.......+|+     ++..|.+.|+.+|.+
T Consensus        80 a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~-----~~~~p~~~Y~~sK~~  154 (321)
T d1rpna_          80 AAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDEN-----TPFYPRSPYGVAKLY  154 (321)
T ss_dssp             CSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTT-----SCCCCCSHHHHHHHH
T ss_pred             cccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCC-----CCccccChhHHHHHH
Confidence            987776667788899999999999999999999885  6889999999988777777787     677888999999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcC-CCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      +|+++..+++..+++++++||+++|||...... .+.+..++.+...+ ++....+++++.++|+|++|+|++++.++++
T Consensus       155 ~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~  234 (321)
T d1rpna_         155 GHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQ  234 (321)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhc
Confidence            999999999999999999999999999754332 23344555555554 4555678889999999999999999999998


Q ss_pred             CCCCcEEecCCCCCCHHHHHHHHHHHcCCCcc--eEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHH
Q 019060          261 ENTGPINIGNPGEFTMLELAENVKELINPNVE--ITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       261 ~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~--~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      +..+.||+++++..|+.++++.+.+.+|.+.+  +...+  ..+........|++|++++|||+|+++++|+|+++++|+
T Consensus       235 ~~~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~~k~~k~lG~~P~~~l~e~i~~tv~~~  314 (321)
T d1rpna_         235 DKADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVEAD  314 (321)
T ss_dssp             SSCCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCSCHHHHHHHHHHHH
T ss_pred             CCcCCceecccccceehhhhHHHHHHhCCCccceeecCCCCCCCCccCCccCCHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            88999999999999999999999999997643  22222  233444567779999999999999999999999999999


Q ss_pred             HHhhc
Q 019060          337 RLRLA  341 (346)
Q Consensus       337 ~~~~~  341 (346)
                      +++.+
T Consensus       315 l~~~~  319 (321)
T d1rpna_         315 LRRVS  319 (321)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            88654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.2e-46  Score=331.36  Aligned_cols=305  Identities=28%  Similarity=0.454  Sum_probs=250.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~a~  106 (346)
                      |||||||||||||++|+++|+++|.++|+++++..+    ...+....++++++.+|+++...      .++|+|||+|+
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~----~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~   76 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSD----AISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA   76 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCG----GGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCc----chhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence            799999999999999999999999458999987432    23334456789999999987532      26999999999


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcC--CCCCCCCCCchHHhHHHHH
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWG--NVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~--~~~~~~~~~~Y~~sK~~~E  184 (346)
                      .........++...+..|+.++.+++++|.+.+.+++++||..+|+........|....  ......|...|+.+|..+|
T Consensus        77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E  156 (342)
T d2blla1          77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD  156 (342)
T ss_dssp             CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHH
T ss_pred             cccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchh
Confidence            88776777888899999999999999999999999999999999997766655554322  1134457788999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCC------ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHH
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDD------GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLM  258 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~  258 (346)
                      .++..++++.+++++++|++.+|||......      ...+..++.+++.|+++.++++++..++|+|++|+|+++..++
T Consensus       157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~  236 (342)
T d2blla1         157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRII  236 (342)
T ss_dssp             HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHH
T ss_pred             hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeeh
Confidence            9999999999999999999999998654322      3467888999999999999999999999999999999999999


Q ss_pred             hCCC----CCcEEecCCCC-CCHHHHHHHHHHHcCCCcceEEccC---------------CCCCCCcccCChHHHHhhcC
Q 019060          259 EGEN----TGPINIGNPGE-FTMLELAENVKELINPNVEITMVEN---------------TPDDPRQRKPDITKATELLG  318 (346)
Q Consensus       259 ~~~~----~~~~~~~~~~~-~s~~ei~~~i~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~k~~~~lg  318 (346)
                      +++.    +++||+++++. +|+.|+++.+.+.+|........+.               ....+.....|++|++++||
T Consensus       237 ~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg  316 (342)
T d2blla1         237 ENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLD  316 (342)
T ss_dssp             HCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHHC
T ss_pred             hhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceeccccccccccccccccccCHHHHHHHHC
Confidence            8742    56899987654 8999999999999986654432221               11123345679999999999


Q ss_pred             CcccccHHhHHHHHHHHHHHhhc
Q 019060          319 WEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       319 ~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      |+|+++++|+|+++++||+++..
T Consensus       317 w~P~~sleegl~~ti~~y~~~~~  339 (342)
T d2blla1         317 WEPKIDMQETIDETLDFFLRTVD  339 (342)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHSC
T ss_pred             CCcCCCHHHHHHHHHHHHHhCcC
Confidence            99999999999999999988764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-44  Score=319.91  Aligned_cols=303  Identities=19%  Similarity=0.216  Sum_probs=245.8

Q ss_pred             CEE-EEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCc-chhhhhc------CCCCeeEEecccCCcccC-------C
Q 019060           33 MRI-LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSK-DNLRKWI------GHPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        33 ~~i-lItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~------~~~~~~~~~~d~~~~~~~-------~   97 (346)
                      ||| ||||||||||++|+++|+++| |+|++++|..+... ..+..+.      ...+++++.+|+.|....       +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g-~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   79 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKG-YEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK   79 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhcc
Confidence            578 999999999999999999999 99999999643211 1111111      124689999999987443       6


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC----eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA----RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      +++++|+++..........+...+++|+.++.+++++|++.++    +|||+||..|||.....+++|+     ++..|.
T Consensus        80 ~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~-----~~~~P~  154 (347)
T d1t2aa_          80 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET-----TPFYPR  154 (347)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT-----SCCCCC
T ss_pred             cceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC-----CCCCCC
Confidence            8999999987766666778888889999999999999998764    7999999999998777888888     677888


Q ss_pred             CchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      ++||.+|.++|+++..+++..+++++++||+++|||......  ..+...++.....+.++...++++..++++|++|++
T Consensus       155 ~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~  234 (347)
T d1t2aa_         155 SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV  234 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHH
Confidence            999999999999999999989999999999999999754332  233444555556677788888999999999999999


Q ss_pred             HHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEcc---------------------CCCCCCCcccCCh
Q 019060          252 DGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEITMVE---------------------NTPDDPRQRKPDI  310 (346)
Q Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~---------------------~~~~~~~~~~~~~  310 (346)
                      +++..++++...+.+++......++.+..+.+...++.........                     ..+.......+|+
T Consensus       235 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~  314 (347)
T d1t2aa_         235 EAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC  314 (347)
T ss_dssp             HHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred             HHHHHHhhcCCCccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECH
Confidence            9999999988888999999999999999999999998765432211                     0122233456799


Q ss_pred             HHHHhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          311 TKATELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       311 ~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +|++++|||+|+++++|+|+++++++.+..+
T Consensus       315 skak~~Lgw~P~~sl~e~i~~~I~~~~~~~k  345 (347)
T d1t2aa_         315 TKAKQKLNWKPRVAFDELVREMVHADVELMR  345 (347)
T ss_dssp             HHHHHHHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCcCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999988766543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-44  Score=318.21  Aligned_cols=305  Identities=23%  Similarity=0.334  Sum_probs=244.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC------Ccchhh--hhcCCCCeeEEecccCCcccC------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG------SKDNLR--KWIGHPRFELIRHDVTEPLLI------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~------~~~~~~--~~~~~~~~~~~~~d~~~~~~~------   96 (346)
                      |.+||||||||||||++|+++|+++| ++|++++|....      ......  ......++.++++|+.|...+      
T Consensus         1 M~kKILITG~tGfIGs~lv~~Ll~~g-~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           1 MAEKVLVTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence            46799999999999999999999999 999999763221      111111  122356899999999987543      


Q ss_pred             -CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCC
Q 019060           97 -EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRS  174 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~  174 (346)
                       ++++++|+|+..+......+|...++.|+.++.++++++++.++ +|||+||..+|+........++.    ....+.+
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~----~~~~~~~  155 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH----PTGGCTN  155 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCSS
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccc----cccccCC
Confidence             58899999998876667778999999999999999999999998 89999999999876544433331    3455667


Q ss_pred             chHHhHHHHHHHHHHHHHH-hCCceEEEEeccccCCCCCCC--------CccHHHHHHHHHH-cCCCeEEec------CC
Q 019060          175 CYDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAI-RGEPLTVQA------PG  238 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~------~~  238 (346)
                      +|+.+|..+|+.+..+++. .+++.+++|++.+|||.....        ...+++.++.... .+.++.+.+      ++
T Consensus       156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g  235 (346)
T d1ek6a_         156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG  235 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence            8999999999999988765 489999999999999864321        1345555555444 355566544      35


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHH
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKAT  314 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~  314 (346)
                      .+.++|+|++|+|.++..++....    .++||+++++.+++.|+++.+.+.+|.+.++.+.+..+........|++|++
T Consensus       236 ~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~d~~k~~  315 (346)
T d1ek6a_         236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQ  315 (346)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHH
T ss_pred             CeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeECHHHHH
Confidence            567899999999999887754422    4589999999999999999999999999999888887777777888999999


Q ss_pred             hhcCCcccccHHhHHHHHHHHHHHhh
Q 019060          315 ELLGWEPKIKLRDGLPLMEDDFRLRL  340 (346)
Q Consensus       315 ~~lg~~p~~~~~e~i~~~~~~~~~~~  340 (346)
                      +.|||+|+++++|+|+++++||+++-
T Consensus       316 ~~lgw~p~~slee~I~~~i~w~~~n~  341 (346)
T d1ek6a_         316 EELGWTAALGLDRMCEDLWRWQKQNP  341 (346)
T ss_dssp             HTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred             HHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence            99999999999999999999998653

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.4e-43  Score=309.28  Aligned_cols=287  Identities=24%  Similarity=0.306  Sum_probs=236.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-------cCCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-------LIEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-------~~~~d~vi~~  104 (346)
                      .|||||||||||||++|+++|+++| +.|+++++...                   .|+.+..       ..++|.|+|+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g-~~vi~~~~~~~-------------------~~~~~~~~~~~~~~~~~~d~v~~~   61 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRG-DVELVLRTRDE-------------------LNLLDSRAVHDFFASERIDQVYLA   61 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCT-TEEEECCCTTT-------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCc-CEEEEecCchh-------------------ccccCHHHHHHHHhhcCCCEEEEc
Confidence            5799999999999999999999999 88877654221                   2333321       1258999999


Q ss_pred             ccCCCcc-ccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          105 ACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       105 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      |+..... .....+...+..|+.++.+++++|++.++ ||||+||.++||.....+.+|+......+..+.+.|+.+|.+
T Consensus        62 a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~  141 (315)
T d1e6ua_          62 AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA  141 (315)
T ss_dssp             CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             chhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence            9765432 23456777889999999999999999998 899999999999888888888866555555566679999999


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCC--ccH-----HHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHH
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD--GRV-----VSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLI  255 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~  255 (346)
                      +|++++.+.++.+++++++||++||||+.....  ..+     ..........+..+.+.+++...++++|++|+++++.
T Consensus       142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~  221 (315)
T d1e6ua_         142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI  221 (315)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence            999999999999999999999999999765432  222     2333455567888888888889999999999999999


Q ss_pred             HHHhCC----------CCCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccH
Q 019060          256 RLMEGE----------NTGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKL  325 (346)
Q Consensus       256 ~~~~~~----------~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  325 (346)
                      .++...          ..+.++++.+...++.++++.+.+.+|.+..+...+..+........|++|++ +|||+|++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~~~~~d~sk~k-~Lg~~p~~~l  300 (315)
T d1e6ua_         222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLH-QLGWYHEISL  300 (315)
T ss_dssp             HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCSBCCBCCHHHH-HTTCCCCCCH
T ss_pred             HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCceeccCHHHHH-HcCCCCCCCH
Confidence            988653          25579999999999999999999999999888887777666666788999996 5999999999


Q ss_pred             HhHHHHHHHHHHHh
Q 019060          326 RDGLPLMEDDFRLR  339 (346)
Q Consensus       326 ~e~i~~~~~~~~~~  339 (346)
                      +|+|+++++||+++
T Consensus       301 ~e~i~~ti~w~~~N  314 (315)
T d1e6ua_         301 EAGLASTYQWFLEN  314 (315)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHc
Confidence            99999999999865

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=6.9e-43  Score=311.11  Aligned_cols=303  Identities=19%  Similarity=0.243  Sum_probs=240.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-cchhhh------hcCCCCeeEEecccCCcccC-------C
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-KDNLRK------WIGHPRFELIRHDVTEPLLI-------E   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-~~~~~~------~~~~~~~~~~~~d~~~~~~~-------~   97 (346)
                      .|++||||||||||++|+++|+++| |+|++++|..+.. ......      ......+.++.+|+.+....       +
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~   79 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKG-YEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK   79 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCc-CEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhc
Confidence            3789999999999999999999999 9999999964321 111111      12234678899999986532       6


Q ss_pred             CCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC------CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           98 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG------ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      +|+|||+|+.........++...+..|+.++.++++++++..      +++++.||..+|+. ...+.+|+     ++..
T Consensus        80 ~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~-~~~~~~E~-----~~~~  153 (339)
T d1n7ha_          80 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGS-TPPPQSET-----TPFH  153 (339)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTT-SCSSBCTT-----SCCC
T ss_pred             cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceeccc-CCCCCCCC-----CCCC
Confidence            899999999877666678899999999999999999987643      26778888887764 34556777     6788


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-ccHHHHHH-HHHHcCCCeEEecCCcceeecccHHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-GRVVSNFI-AQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      |.+.|+.+|..+|.++..+++.++++++++||+++|||+..... ...+...+ ..........+.+++.+.++++|++|
T Consensus       154 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D  233 (339)
T d1n7ha_         154 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD  233 (339)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred             CcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeeh
Confidence            89999999999999999999999999999999999999754332 22233333 33344555666688889999999999


Q ss_pred             HHHHHHHHHhCCCCCcEEecCCCCCCHHHHHHHHHHHcCCCcce--EE--ccCCCCCCCcccCChHHHHhhcCCcccccH
Q 019060          250 MVDGLIRLMEGENTGPINIGNPGEFTMLELAENVKELINPNVEI--TM--VENTPDDPRQRKPDITKATELLGWEPKIKL  325 (346)
Q Consensus       250 va~~i~~~~~~~~~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~--~~--~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~  325 (346)
                      +|+++..+++++..+.+++..+...+..++++.+.+.+|.....  ..  ....+........|++|+++.|||+|++++
T Consensus       234 ~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~LGw~P~~~l  313 (339)
T d1n7ha_         234 YVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGWKPQVGF  313 (339)
T ss_dssp             HHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCCCCCSCH
T ss_pred             HHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHHCCCcCCCH
Confidence            99999999999888888888889999999999999999976432  21  223344455667799999999999999999


Q ss_pred             HhHHHHHHHHHHHhhc
Q 019060          326 RDGLPLMEDDFRLRLA  341 (346)
Q Consensus       326 ~e~i~~~~~~~~~~~~  341 (346)
                      +|+|+++++||++..+
T Consensus       314 e~gi~~ti~~~~~~~~  329 (339)
T d1n7ha_         314 EKLVKMMVDEDLELAK  329 (339)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999987754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.8e-43  Score=311.37  Aligned_cols=303  Identities=21%  Similarity=0.306  Sum_probs=235.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhh--hhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLR--KWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      |.|||||||||||++|+++|+++| ++|+++++..........  ......+++++.+|+.+.+.+       ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g-~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENG-YDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCc-CeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEE
Confidence            569999999999999999999999 999999875444333222  222346799999999987543       7999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCC----CCCCCCCcCCCCCCCCCCchHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLV----HPQDESYWGNVNPIGVRSCYDE  178 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~----~~~~e~~~~~~~~~~~~~~Y~~  178 (346)
                      +|+.........++.....+|+.++.+++++|++.++ |||++||..+||....    .+.+|+     .+..|.+.|+.
T Consensus        81 lAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~-----~~~~p~~~Y~~  155 (347)
T d1z45a2          81 FAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEE-----CPLGPTNPYGH  155 (347)
T ss_dssp             CCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTT-----SCCCCCSHHHH
T ss_pred             ccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccc-----cCCCCCChhHh
Confidence            9998776667778899999999999999999999997 8999999999986543    334444     57778899999


Q ss_pred             hHHHHHHHHHHHHHH--hCCceEEEEeccccCCCCCCC--------CccHHHHHHHHHHc-CCCeEEecCC------cce
Q 019060          179 GKRVAETLMFDYHRQ--HGIEIRIARIFNTYGPRMNID--------DGRVVSNFIAQAIR-GEPLTVQAPG------TQT  241 (346)
Q Consensus       179 sK~~~E~~~~~~~~~--~~~~~~ivR~~~i~G~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~~~~------~~~  241 (346)
                      +|.++|++++.+.+.  .+++++++|++.+||+.....        ...+++.++..... +.++.+++++      ...
T Consensus       156 sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~  235 (347)
T d1z45a2         156 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI  235 (347)
T ss_dssp             HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred             HHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCcee
Confidence            999999999988764  468899999999999754221        12456665555443 4556555543      345


Q ss_pred             eecccHHHHHHHHHHHHhCC------C--CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHH
Q 019060          242 RSFCYVSDMVDGLIRLMEGE------N--TGPINIGNPGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKA  313 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~------~--~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~  313 (346)
                      +|++++.|++.+++.+++..      .  .++||+++++++|+.|+++.+.+.+|.+.++...+..+.......+|++|+
T Consensus       236 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~  315 (347)
T d1z45a2         236 RDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRA  315 (347)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHH
T ss_pred             eeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHH
Confidence            68888888999888777531      1  568999999999999999999999999988887776666666778899999


Q ss_pred             HhhcCCcccccHHhHHHHHHHHHHHhhc
Q 019060          314 TELLGWEPKIKLRDGLPLMEDDFRLRLA  341 (346)
Q Consensus       314 ~~~lg~~p~~~~~e~i~~~~~~~~~~~~  341 (346)
                      +++|||+|+++++|+|+++++||+++-.
T Consensus       316 ~~~lGw~p~~~lee~i~~ti~w~~~np~  343 (347)
T d1z45a2         316 KRELKWQTELQVEDSCKDLWKWTTENPF  343 (347)
T ss_dssp             HHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHhChh
Confidence            9999999999999999999999988743

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=3.2e-41  Score=305.21  Aligned_cols=308  Identities=22%  Similarity=0.344  Sum_probs=238.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCC--------Ccchhhh----------hcCCCCeeEEecccCCc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTG--------SKDNLRK----------WIGHPRFELIRHDVTEP   93 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~--------~~~~~~~----------~~~~~~~~~~~~d~~~~   93 (346)
                      .|||||||||||||++|+++|++++.|+|+++++-...        ..+....          ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            68999999999999999999997533999999752110        1111100          01124678999999986


Q ss_pred             cc--------CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCC--CCC
Q 019060           94 LL--------IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQ--DES  162 (346)
Q Consensus        94 ~~--------~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~--~e~  162 (346)
                      ..        .++|+|||+|+..........+...++.|+.++.++++++++.++ +++++||..+|+.......  .+.
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            43        257999999998776666778888999999999999999999997 8999999998875443322  222


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC-------ccHHHHHHHHHH--------
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD-------GRVVSNFIAQAI--------  227 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~-------~~~~~~~~~~~~--------  227 (346)
                      .....++..|.+.|+.+|...|+++..+.+.++++++++|++++|||+.....       ..+++.++..+.        
T Consensus       162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~  241 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQR  241 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC--
T ss_pred             ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhcccccc
Confidence            22333677888999999999999999999999999999999999999865432       233444433332        


Q ss_pred             --------cCCCeEEecC------CcceeecccHHHHHHHHHHHHhCC----------CCCcEEecCCCCCCHHHHHHHH
Q 019060          228 --------RGEPLTVQAP------GTQTRSFCYVSDMVDGLIRLMEGE----------NTGPINIGNPGEFTMLELAENV  283 (346)
Q Consensus       228 --------~~~~~~~~~~------~~~~~~~v~v~Dva~~i~~~~~~~----------~~~~~~~~~~~~~s~~ei~~~i  283 (346)
                              .++++.+.+.      +.+.++|+|++|+|++++.+++..          ..++||+++++++|+.|+++.+
T Consensus       242 ~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i  321 (383)
T d1gy8a_         242 LTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVA  321 (383)
T ss_dssp             ---------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHHH
T ss_pred             chhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHHH
Confidence                    3455555543      566789999999999999988631          1458999999999999999999


Q ss_pred             HHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHH-HHHHHh
Q 019060          284 KELINPNVEITMVENTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLME-DDFRLR  339 (346)
Q Consensus       284 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~-~~~~~~  339 (346)
                      .+.+|.+.++...+..+........|++|+++.|||+|+++++|+|+++. +|++++
T Consensus       322 ~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~LGw~P~~~l~e~i~~t~~~w~~~~  378 (383)
T d1gy8a_         322 RKTTGHPIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH  378 (383)
T ss_dssp             HHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred             HHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHHCCccCCCHHHHHHHHHHHHHHhC
Confidence            99999999888887777777778889999999999999999999998874 666553

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-41  Score=308.45  Aligned_cols=308  Identities=25%  Similarity=0.295  Sum_probs=236.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC-------------CC---CCcchhhh--hcCCCCeeEEecccCCc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY-------------FT---GSKDNLRK--WIGHPRFELIRHDVTEP   93 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~-------------~~---~~~~~~~~--~~~~~~~~~~~~d~~~~   93 (346)
                      +|||||||||||||++|+++|++.| |+|++++.-             ..   .....+..  .....+++++.+|+.|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g-~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCc-CEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence            5899999999999999999999999 999998620             00   01111111  12235799999999987


Q ss_pred             ccC-------CCCEEEEcccCCCccccccC---hHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCC
Q 019060           94 LLI-------EVDQIYHLACPASPIFYKYN---PVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        94 ~~~-------~~d~vi~~a~~~~~~~~~~~---~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e  161 (346)
                      +.+       ++|+|||+|+......+..+   +...+..|+.++.+++++|++.++  +++++||..+|+.... +..|
T Consensus        80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~-~~~~  158 (393)
T d1i24a_          80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI-DIEE  158 (393)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS-CBCS
T ss_pred             HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc-cccc
Confidence            543       68999999987765444433   456778999999999999999886  5888888888875432 2222


Q ss_pred             CCc---------CCCCCCCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCC---------------cc
Q 019060          162 SYW---------GNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDD---------------GR  217 (346)
Q Consensus       162 ~~~---------~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~---------------~~  217 (346)
                      .+.         ....+..|.+.|+.+|..+|.++..++++.+++++++||+++|||+.....               ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence            211         111356777889999999999999999999999999999999999754321               34


Q ss_pred             HHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC-CCcEEe--cCCCCCCHHHHHHHHHHHc---CCCc
Q 019060          218 VVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN-TGPINI--GNPGEFTMLELAENVKELI---NPNV  291 (346)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~-~~~~~~--~~~~~~s~~ei~~~i~~~~---g~~~  291 (346)
                      ++..++.+...++++.+++++.+.++|+|++|+|++++.++++.. .|.+++  .+++.+|+.|+++.+.+..   +.+.
T Consensus       239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~  318 (393)
T d1i24a_         239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDV  318 (393)
T ss_dssp             HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCC
T ss_pred             chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCc
Confidence            678888889999999999999999999999999999999998765 666554  4567899999999998875   4444


Q ss_pred             ceEEcc--CCCCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHHHhhcC
Q 019060          292 EITMVE--NTPDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFRLRLAV  342 (346)
Q Consensus       292 ~~~~~~--~~~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~~~~~~  342 (346)
                      .....+  ..+........|++|+++ |||+|+++++++++++++|+++...+
T Consensus       319 ~~~~~~~~~~~~~~~~~~~d~~k~~~-LGw~P~~~~~~~i~~~~~~~~~~k~~  370 (393)
T d1i24a_         319 KKMTVPNPRVEAEEHYYNAKHTKLME-LGLEPHYLSDSLLDSLLNFAVQFKDR  370 (393)
T ss_dssp             CEEEECCSSCSCSSCCCCBCCCHHHH-TTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred             ceeeccCCCCCCCccEecCCHHHHHH-cCCccccCHHHHHHHHHHHHHHHHHh
Confidence            444332  233444556778999975 99999999999999999999887543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=100.00  E-value=3.5e-41  Score=299.69  Aligned_cols=304  Identities=28%  Similarity=0.410  Sum_probs=242.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC-CCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEcc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT-GSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHLA  105 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~a  105 (346)
                      ||||||||||||++|+++|+++| ++|+++++-.. .....+......++++++.+|+.+...+       ++|+|||+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g-~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQG-IDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCc-CEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            79999999999999999999999 99999986432 2333333444457899999999986543       589999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeccc-ccCCCCCCCCCC-----------CCcCCCCCCCC
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSE-VYGDPLVHPQDE-----------SYWGNVNPIGV  172 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~-v~~~~~~~~~~e-----------~~~~~~~~~~~  172 (346)
                      +.........++...+++|+.++.+|+++|.+.++ ++|++||.. +++.....+..+           .......+..|
T Consensus        81 a~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T d1orra_          81 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF  160 (338)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred             ccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence            98776666678899999999999999999999987 655555554 454433322111           11122245667


Q ss_pred             CCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCC-CccHHHHHHHHHH-----cCCCeEEecCCcceeeccc
Q 019060          173 RSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAI-----RGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~  246 (346)
                      ...|+.+|...|.++..+.+..+....++|++.+|++..... ....+..++....     .++++.+++++...++|+|
T Consensus       161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~  240 (338)
T d1orra_         161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH  240 (338)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred             ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence            788999999999999999999999999999999997654332 2445555555544     3678999999999999999


Q ss_pred             HHHHHHHHHHHHhCCC---CCcEEecC--CCCCCHHHHHHHHHHHcCCCcceEEccCCCCCCCcccCChHHHHhhcCCcc
Q 019060          247 VSDMVDGLIRLMEGEN---TGPINIGN--PGEFTMLELAENVKELINPNVEITMVENTPDDPRQRKPDITKATELLGWEP  321 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~---~~~~~~~~--~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~lg~~p  321 (346)
                      ++|++++++.++++..   ++.|++..  +..+++.|+++.+.+.+|.+.++...+..+........|++|+++.|||+|
T Consensus       241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~Lg~~p  320 (338)
T d1orra_         241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSP  320 (338)
T ss_dssp             HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHHCCCC
T ss_pred             ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHHCCCc
Confidence            9999999999987643   66888854  467899999999999999998888887777777777889999999999999


Q ss_pred             cccHHhHHHHHHHHHHH
Q 019060          322 KIKLRDGLPLMEDDFRL  338 (346)
Q Consensus       322 ~~~~~e~i~~~~~~~~~  338 (346)
                      +++++|+|+++++||+.
T Consensus       321 ~~sl~e~i~~ti~W~k~  337 (338)
T d1orra_         321 KVSAKDGVQKMYDWTSS  337 (338)
T ss_dssp             CSCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHc
Confidence            99999999999999964

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=7e-39  Score=286.95  Aligned_cols=304  Identities=20%  Similarity=0.255  Sum_probs=236.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~~  104 (346)
                      +|||||||||||||++|+++|+++| ++|++++|..++...........++++++.+|+.|...+       .+|+|+|+
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g-~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            6899999999999999999999999 999999997665554443333346799999999987543       68999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-e-EEEEecccccCCC-CCCCCCCCCcCCCCCCCCCCchHHhHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-R-ILLTSTSEVYGDP-LVHPQDESYWGNVNPIGVRSCYDEGKR  181 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r-~i~~SS~~v~~~~-~~~~~~e~~~~~~~~~~~~~~Y~~sK~  181 (346)
                      |+..........+.....+|+.++.++++++++.+. + +++.||..++... ...+.+|+     .+..|.++|+.+|.
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-----~~~~p~~~y~~~k~  161 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYREN-----EAMGGYDPYSNSKG  161 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTT-----SCBCCSSHHHHHHH
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccc-----cccCCCCccccccc
Confidence            998776666788999999999999999999999875 4 5555555555433 33344554     56778889999999


Q ss_pred             HHHHHHHHHHH---------HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHH
Q 019060          182 VAETLMFDYHR---------QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVD  252 (346)
Q Consensus       182 ~~E~~~~~~~~---------~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  252 (346)
                      ..|..+..++.         ..++.++++||+++|||+... ...+++.++.....+.++ +.+.+...++++|++|+|.
T Consensus       162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~v~D~~~  239 (356)
T d1rkxa_         162 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA-LDRIVPDILRAFEQSQPV-IIRNPHAIRPWQHVLEPLS  239 (356)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC-SSCHHHHHHHHHHTTCCE-ECSCTTCEECCEETHHHHH
T ss_pred             cchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcch-hhHHHHHHHHHHhCCCce-EEeeccccccccccccccc
Confidence            99998887665         346789999999999997532 356777777776655554 5678888999999999999


Q ss_pred             HHHHHHhCCC------CCcEE--ecCCCCCCHHHHHHHHHHHcCCCcceEEccC-CCCCCCcccCChHHHHhhcCCcccc
Q 019060          253 GLIRLMEGEN------TGPIN--IGNPGEFTMLELAENVKELINPNVEITMVEN-TPDDPRQRKPDITKATELLGWEPKI  323 (346)
Q Consensus       253 ~i~~~~~~~~------~~~~~--~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~k~~~~lg~~p~~  323 (346)
                      ++..++.+..      ....+  ...+..+++.++++.+.+.++....+..... .+.......+|++|++++|||+|++
T Consensus       240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~LGw~P~~  319 (356)
T d1rkxa_         240 GYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQLGWHPRW  319 (356)
T ss_dssp             HHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHHCCCCCC
T ss_pred             hhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHHCCCcCC
Confidence            9998887543      22233  3345678999999999999998877665432 3444556678999999999999999


Q ss_pred             cHHhHHHHHHHHHHHhhcCC
Q 019060          324 KLRDGLPLMEDDFRLRLAVP  343 (346)
Q Consensus       324 ~~~e~i~~~~~~~~~~~~~~  343 (346)
                      +++++|+++++||+...+..
T Consensus       320 ~l~egi~~ti~wyk~~~~~~  339 (356)
T d1rkxa_         320 NLNTTLEYIVGWHKNWLSGT  339 (356)
T ss_dssp             CHHHHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHcCC
Confidence            99999999999998865543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=100.00  E-value=1.6e-38  Score=275.25  Aligned_cols=268  Identities=21%  Similarity=0.222  Sum_probs=228.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~  104 (346)
                      .|||||||||||||++|+++|.++| |+|++++|..                    .|+.+...       .++|+|||+
T Consensus         1 ~MKIlItGasGfiG~~l~~~L~~~g-~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~~~d~vih~   59 (281)
T d1vl0a_           1 HMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQD--------------------LDITNVLAVNKFFNEKKPNVVINC   59 (281)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTTT--------------------CCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEeechh--------------------ccCCCHHHHHHHHHHcCCCEEEee
Confidence            4899999999999999999999999 9999998843                    23333321       268999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      |+..........+......|+.....+.+.+.....+++++||..+|+.....+..|.     ++..+...|+.+|...|
T Consensus        60 a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~-----~~~~~~~~~~~~k~~~e  134 (281)
T d1vl0a_          60 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEF-----DEVNPQSAYGKTKLEGE  134 (281)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTT-----SCCCCCSHHHHHHHHHH
T ss_pred             ccccccccccccchhhcccccccccccccccccccccccccccceeeecccccccccc-----ccccchhhhhhhhhHHH
Confidence            9987766777888888999999999999999998889999999999998888888887     57778889999999999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCC
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTG  264 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~  264 (346)
                      ++++.    .+.+++++||+++||++     .++...++.....++.+.+.+  +..++++|++|+++++..++++...|
T Consensus       135 ~~~~~----~~~~~~i~R~~~vyG~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~g  203 (281)
T d1vl0a_         135 NFVKA----LNPKYYIVRTAWLYGDG-----NNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNYG  203 (281)
T ss_dssp             HHHHH----HCSSEEEEEECSEESSS-----SCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCCE
T ss_pred             HHHHH----hCCCccccceeEEeCCC-----cccccchhhhhccCCceeecC--CceeccchhhhhhhhhhhhhhhcccC
Confidence            98754    47899999999999996     456778888888888887765  57889999999999999999998899


Q ss_pred             cEEecCCCCCCHHHHHHHHHHHcCCCcceEEccCCCC-----CCCcccCChHHHHhhcCCcccccHHhHHHHHHHHHH
Q 019060          265 PINIGNPGEFTMLELAENVKELINPNVEITMVENTPD-----DPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDFR  337 (346)
Q Consensus       265 ~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~~  337 (346)
                      +||+++++.+|+.|+++.+.+.+|.+.++...+....     .+....+|++|+++.|||+|+ +|+|+|++++++++
T Consensus       204 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ld~~k~~~~~g~~~~-~~~~~l~~~l~~l~  280 (281)
T d1vl0a_         204 TFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLKEYIDLLQ  280 (281)
T ss_dssp             EEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHHHHT
T ss_pred             ceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccccCHHHHHHHhCCCCC-CHHHHHHHHHHHhc
Confidence            9999999999999999999999999988776543221     122345799999999999998 99999999999974

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-37  Score=268.11  Aligned_cols=292  Identities=20%  Similarity=0.253  Sum_probs=208.0

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEe-cccCC-----cccCCCCEEEEcccCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDVTE-----PLLIEVDQIYHLACPA  108 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~d~~~-----~~~~~~d~vi~~a~~~  108 (346)
                      |||||||||||++|+++|+++|.++|+++++-....  ............... .|+.+     .....+++|+|+|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT--KFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG--GGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc--hhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            899999999999999999999955899987533221  111222222222222 12221     2234689999999754


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHH
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMF  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~  188 (346)
                      .  ............|+.++.+++++++..++++++.||..+++.......+++     .+..|.+.|+.+|..+|.+++
T Consensus        80 ~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~-----~~~~~~~~Y~~~K~~~e~~~~  152 (307)
T d1eq2a_          80 S--TTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESR-----EYEKPLNVYGYSKFLFDEYVR  152 (307)
T ss_dssp             C--TTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSG-----GGCCCSSHHHHHHHHHHHHHH
T ss_pred             c--ccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccccccccchhhhhcc
Confidence            3  334566677788899999999999999999999999998877666655555     456677889999999999999


Q ss_pred             HHHHHhCCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEE-ecCCcceeecccHHHHHHHHHHHHhCCCCCc
Q 019060          189 DYHRQHGIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTV-QAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       189 ~~~~~~~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      .+..+.+++++++||+++|||......  ......+...+..++...+ .+++...++++|++|+++++..++++...+.
T Consensus       153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~~~~  232 (307)
T d1eq2a_         153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGI  232 (307)
T ss_dssp             HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCCCEE
T ss_pred             ccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhccccc
Confidence            999999999999999999999765332  3456667777777765544 4667778999999999999999999888899


Q ss_pred             EEecCCCCCCHHHHHHHHHHHcCCCcceEEccCC----CCCCCcccCChHHHHhhcCCcccccHHhHHHHHHHHH
Q 019060          266 INIGNPGEFTMLELAENVKELINPNVEITMVENT----PDDPRQRKPDITKATELLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       266 ~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~~~k~~~~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      ||+++++..|+.|+++++.+..+. .++...+..    .........|++|+++.+||+|+++++|+|+++++|+
T Consensus       233 ~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~~d~~k~~~~~~~~p~~sl~egi~~~i~w~  306 (307)
T d1eq2a_         233 FNLGTGRAESFQAVADATLAYHKK-GQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVTEYMAWL  306 (307)
T ss_dssp             EEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred             cccccccchhHHHHHHHHHHhcCC-CCeeEeeCCccCCCCCceeeecCHHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence            999999999999999999887643 333332211    1122334558999999999999999999999999985

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=1.7e-36  Score=269.80  Aligned_cols=302  Identities=17%  Similarity=0.162  Sum_probs=218.8

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---c-CCCCeeEEecccCCccc-----CCC
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPLL-----IEV   98 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~d~~~~~~-----~~~   98 (346)
                      +.+.+++|||||||||||++|+++|+++| ++|+++.|+... ...+...   . .......+.+|+.+...     .++
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G-~~V~~~vR~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   84 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHG-YKVRGTARSASK-LANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA   84 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHH-HHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEeCCchh-HHHHHHhhhccccccccEEEeccccchhhhhhhcccc
Confidence            34568999999999999999999999999 999999986421 2222211   1 12234567889987643     369


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEecccccCCCC----CCCCCCCCc--------
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-A-RILLTSTSEVYGDPL----VHPQDESYW--------  164 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-r~i~~SS~~v~~~~~----~~~~~e~~~--------  164 (346)
                      |+|+|+++...   ...++...+..|+.++.+++++|.+.+ + +|||+||..+++...    ....+|+.+        
T Consensus        85 ~~v~~~a~~~~---~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  161 (342)
T d1y1pa1          85 AGVAHIASVVS---FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKA  161 (342)
T ss_dssp             SEEEECCCCCS---CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHH
T ss_pred             hhhhhhccccc---ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccc
Confidence            99999997653   345567788899999999999998874 5 899999987543221    122233322        


Q ss_pred             ---CCCCCCCCCCchHHhHHHHHHHHHHHHHHhC--CceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCC
Q 019060          165 ---GNVNPIGVRSCYDEGKRVAETLMFDYHRQHG--IEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       165 ---~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                         .+..+..|...|+.+|..+|.+++.+.+.++  ++++++||+.+|||...+.. ...+..++..+..++..... .+
T Consensus       162 ~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~  240 (342)
T d1y1pa1         162 KTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-AL  240 (342)
T ss_dssp             HHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HT
T ss_pred             ccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CC
Confidence               2224556677899999999999999988764  67888999999999765443 44677788888888766543 45


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC-CCcEEecCCCCCCHHHHHHHHHHHcCC-CcceEEccCCCCCCCcc-cCChHHHHh
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN-TGPINIGNPGEFTMLELAENVKELINP-NVEITMVENTPDDPRQR-KPDITKATE  315 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~-~~~~~~~~~~~~s~~ei~~~i~~~~g~-~~~~~~~~~~~~~~~~~-~~~~~k~~~  315 (346)
                      +..++|+|++|+|++++.+++++. .|.|++++++.+++.|+++.+.+.++. ..+... +......... .....+..+
T Consensus       241 ~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~-~~~~~~~~~~~~~~s~~~~k  319 (342)
T d1y1pa1         241 MPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADF-PDQGQDLSKFDTAPSLEILK  319 (342)
T ss_dssp             CCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCC-CCCCCCCCEECCHHHHHHHH
T ss_pred             ccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccC-CccCcccccccchHHHHHHH
Confidence            566899999999999999998866 778999999999999999999999843 222211 1111111111 112234445


Q ss_pred             hcCCcccccHHhHHHHHHHHH
Q 019060          316 LLGWEPKIKLRDGLPLMEDDF  336 (346)
Q Consensus       316 ~lg~~p~~~~~e~i~~~~~~~  336 (346)
                      .|||.+.++++|+|+++++.+
T Consensus       320 ~lg~~~~~~lee~i~d~I~s~  340 (342)
T d1y1pa1         320 SLGRPGWRSIEESIKDLVGSE  340 (342)
T ss_dssp             HTTCCSCCCHHHHHHHHHCCS
T ss_pred             HcCCCCCcCHHHHHHHHHHhC
Confidence            699999889999999998753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=100.00  E-value=3.4e-34  Score=249.69  Aligned_cols=272  Identities=18%  Similarity=0.131  Sum_probs=208.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-------CCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-------IEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~~d~vi~~a  105 (346)
                      |||||||||||||++|++.|.+.| +.|.+ ++....                +.+|+.+...       .++|+|||+|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g-~~v~~-~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~A   62 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG-NLIAL-DVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAA   62 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS-EEEEE-CTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC-CEEEE-ECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEec
Confidence            899999999999999999999988 65544 442211                2356666432       2689999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAET  185 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~  185 (346)
                      |...+..+..++...+..|+.++.+++++|++.+++++++||..+|+.....+.+|+     .+..|.+.|+.+|..+|.
T Consensus        63 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~-----~~~~p~~~y~~~k~~~e~  137 (298)
T d1n2sa_          63 AHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQET-----DATSPLNVYGKTKLAGEK  137 (298)
T ss_dssp             CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTT-----SCCCCSSHHHHHHHHHHH
T ss_pred             ccccccccccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccc-----cccCCCchHhhhhhhhhh
Confidence            988777788899999999999999999999999999999999999998888888888     677888999999999999


Q ss_pred             HHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC----C
Q 019060          186 LMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG----E  261 (346)
Q Consensus       186 ~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~----~  261 (346)
                      .+...    .....++|++.+|+..    .......+...+..+..+...  ++...+++|+.|+++++..++..    +
T Consensus       138 ~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~  207 (298)
T d1n2sa_         138 ALQDN----CPKHLIFRTSWVYAGK----GNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKP  207 (298)
T ss_dssp             HHHHH----CSSEEEEEECSEECSS----SCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCG
T ss_pred             hHHhh----hcccccccccceeecc----CCccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhccc
Confidence            87653    4456777777766443    233445555666666666654  35678999999999999887752    2


Q ss_pred             -CCCcEEecCCCCCCHHHHHHHHHHHcCC---CcceE---EccCCC-----CCCCcccCChHHHHhhcCCcccccHHhHH
Q 019060          262 -NTGPINIGNPGEFTMLELAENVKELINP---NVEIT---MVENTP-----DDPRQRKPDITKATELLGWEPKIKLRDGL  329 (346)
Q Consensus       262 -~~~~~~~~~~~~~s~~ei~~~i~~~~g~---~~~~~---~~~~~~-----~~~~~~~~~~~k~~~~lg~~p~~~~~e~i  329 (346)
                       ..++||+++++.++..++++.+.+..+.   ...+.   ..+...     ..+....+|++|+++.|||+|+ +|+++|
T Consensus       208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~RP~~~~ld~~K~~~~~~~~~~-~~~~gl  286 (298)
T d1n2sa_         208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLILP-QWELGV  286 (298)
T ss_dssp             GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCCC-BHHHHH
T ss_pred             cccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCCCccccccCHHHHHHHHCCCCC-cHHHHH
Confidence             2789999999999999999998876642   22221   111110     1123346799999999999998 999999


Q ss_pred             HHHHHHHHH
Q 019060          330 PLMEDDFRL  338 (346)
Q Consensus       330 ~~~~~~~~~  338 (346)
                      +++++++..
T Consensus       287 ~~~i~~~~~  295 (298)
T d1n2sa_         287 KRMLTEMFT  295 (298)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHHh
Confidence            999998754

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=6.6e-29  Score=217.26  Aligned_cols=235  Identities=13%  Similarity=0.076  Sum_probs=169.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh---hhhcCCCCeeEEecccCCccc-----CCCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL---RKWIGHPRFELIRHDVTEPLL-----IEVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~  103 (346)
                      ++||||||||||||++|+++|+++| |+|++++|+........   ...+...+++++.+|+.+...     .+.+++++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCC-CEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            5789999999999999999999999 99999999754332221   122335679999999998654     37899999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHH
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRV  182 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~  182 (346)
                      +++....           ..|..+..+++++|.+.+. +++++||..++...      +.     .+..+...|...|..
T Consensus        82 ~~~~~~~-----------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~-----~~~~~~~~~~~~~~~  139 (312)
T d1qyda_          82 ALAGGVL-----------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------ME-----HALQPGSITFIDKRK  139 (312)
T ss_dssp             CCCCSSS-----------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CC-----CCCSSTTHHHHHHHH
T ss_pred             hhhhccc-----------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cc-----cccchhhhhhHHHHH
Confidence            8864321           2244566778888888875 88888886654321      11     233444556666666


Q ss_pred             HHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC
Q 019060          183 AETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       183 ~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      +++.    ....+++++++||+.+||+.......    ........++.+.++++++..++|+|++|+|++++.++.++.
T Consensus       140 ~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~  211 (312)
T d1qyda_         140 VRRA----IEAASIPYTYVSSNMFAGYFAGSLAQ----LDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ  211 (312)
T ss_dssp             HHHH----HHHTTCCBCEEECCEEHHHHTTTSSC----TTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             HHHh----hcccccceEEeccceeecCCccchhh----HHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc
Confidence            6654    45668999999999999975322111    111112345667777889999999999999999999998765


Q ss_pred             --CCc-EEecCCCCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          263 --TGP-INIGNPGEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       263 --~~~-~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                        ++. |++.+++.+|+.|+++.+.+.+|.+.++...+
T Consensus       212 ~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~  249 (312)
T d1qyda_         212 TLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS  249 (312)
T ss_dssp             GSSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred             ccCceEEEeCCCcCCCHHHHHHHHHHHHCCCCeEEECC
Confidence              455 55666678999999999999999887765443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.95  E-value=1.3e-28  Score=214.47  Aligned_cols=230  Identities=15%  Similarity=0.146  Sum_probs=165.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh----hhhcCCCCeeEEecccCCcccC-----CCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL----RKWIGHPRFELIRHDVTEPLLI-----EVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~d~~~~~~~-----~~d~v  101 (346)
                      ++|||||||||||||++|+++|+++| |+|++++|.........    .......+++++.+|+.+....     +.+.+
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G-~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v   80 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV   80 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence            47899999999999999999999999 99999999754432221    1122345789999999887542     79999


Q ss_pred             EEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhH
Q 019060          102 YHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGK  180 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK  180 (346)
                      +|+++..               +..++.++++++...++ ++++.||......       +.     ....+...+...+
T Consensus        81 i~~~~~~---------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~-------~~-----~~~~~~~~~~~~~  133 (307)
T d1qyca_          81 ISTVGSL---------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDVD-------NV-----HAVEPAKSVFEVK  133 (307)
T ss_dssp             EECCCGG---------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCTT-------SC-----CCCTTHHHHHHHH
T ss_pred             eeccccc---------------ccchhhHHHHHHHHhccccceeeeccccccc-------cc-----ccccccccccccc
Confidence            9988532               23355677888888887 6777776543321       11     1122223344444


Q ss_pred             HHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhC
Q 019060          181 RVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEG  260 (346)
Q Consensus       181 ~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~  260 (346)
                      ...+..    ....+++++++||+.+||+....     +..+......+....+++.++..++|+|++|+|++++.++++
T Consensus       134 ~~~~~~----~~~~~~~~~i~r~~~v~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~  204 (307)
T d1qyca_         134 AKVRRA----IEAEGIPYTYVSSNCFAGYFLRS-----LAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDD  204 (307)
T ss_dssp             HHHHHH----HHHHTCCBEEEECCEEHHHHTTT-----TTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSC
T ss_pred             ccccch----hhccCCCceecccceecCCCccc-----hhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcC
Confidence            444444    45568999999999999975322     222233344566777888899999999999999999999987


Q ss_pred             CC--CCc-EEecCCCCCCHHHHHHHHHHHcCCCcceEEcc
Q 019060          261 EN--TGP-INIGNPGEFTMLELAENVKELINPNVEITMVE  297 (346)
Q Consensus       261 ~~--~~~-~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~  297 (346)
                      +.  ++. |++++++.+|+.|+++.+.+.+|.+.++..++
T Consensus       205 ~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~  244 (307)
T d1qyca_         205 PRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP  244 (307)
T ss_dssp             GGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred             hhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCCcEEECC
Confidence            65  444 55667799999999999999999988776544

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-26  Score=193.19  Aligned_cols=208  Identities=13%  Similarity=0.031  Sum_probs=152.7

Q ss_pred             hhhccCCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc-----cCCC
Q 019060           25 FSKFFQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL-----LIEV   98 (346)
Q Consensus        25 ~~~~~~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-----~~~~   98 (346)
                      .+...+++|+|||||||||||++|+++|+++|. ++|++++|+........     ...+....+|+.+.+     ..++
T Consensus         7 ~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~~~~   81 (232)
T d2bkaa1           7 REDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQGH   81 (232)
T ss_dssp             HHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGSSC
T ss_pred             HHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeeccccccccccccccc
Confidence            445566789999999999999999999999995 48999999654332221     235777778877653     3379


Q ss_pred             CEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchH
Q 019060           99 DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYD  177 (346)
Q Consensus        99 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~  177 (346)
                      |+|||++|..   ........+.++|+.++.+++++|++.++ +|||+||..+++.                  +...|+
T Consensus        82 d~vi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~------------------~~~~Y~  140 (232)
T d2bkaa1          82 DVGFCCLGTT---RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS------------------SNFLYL  140 (232)
T ss_dssp             SEEEECCCCC---HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHH
T ss_pred             cccccccccc---ccccchhhhhhhcccccceeeecccccCccccccCCccccccC------------------ccchhH
Confidence            9999999754   22344566778999999999999999998 7999999887532                  225699


Q ss_pred             HhHHHHHHHHHHHHHHhCC-ceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHH
Q 019060          178 EGKRVAETLMFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIR  256 (346)
Q Consensus       178 ~sK~~~E~~~~~~~~~~~~-~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~  256 (346)
                      .+|..+|+.+..    .++ +++|+||+.+||++..   .+....++.......     .........|+++|+|++++.
T Consensus       141 ~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~I~~~dvA~a~i~  208 (232)
T d2bkaa1         141 QVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQE---SRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVRAMLN  208 (232)
T ss_dssp             HHHHHHHHHHHT----TCCSEEEEEECCEEECTTGG---GSHHHHHHHHHHCSC-----CTTGGGGTEEEHHHHHHHHHH
T ss_pred             HHHHHhhhcccc----ccccceEEecCceeecCCCc---CcHHHHHHHHHhhcc-----CCcccCCCeEEHHHHHHHHHH
Confidence            999999998754    355 4899999999998643   233344444443321     123344467999999999999


Q ss_pred             HHhCCC-CCcEEecC
Q 019060          257 LMEGEN-TGPINIGN  270 (346)
Q Consensus       257 ~~~~~~-~~~~~~~~  270 (346)
                      ++..+. .+.+.+.+
T Consensus       209 ~~~~~~~~~~~i~~~  223 (232)
T d2bkaa1         209 NVVRPRDKQMELLEN  223 (232)
T ss_dssp             HHTSCCCSSEEEEEH
T ss_pred             HHhcCccCCeEEEcH
Confidence            888776 45555543

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.5e-26  Score=185.34  Aligned_cols=193  Identities=12%  Similarity=0.091  Sum_probs=145.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEcc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHLA  105 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~a  105 (346)
                      .++||+||||||+||++++++|+++| |+|+++.|+..+...     ....+++++.+|+.+.+.     .++|+|||++
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g-~~V~~~~R~~~~~~~-----~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~   75 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCc-CEEEEEEcChhhccc-----ccccccccccccccchhhHHHHhcCCCEEEEEe
Confidence            46799999999999999999999999 999999996433221     223578999999999754     3799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHH
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAE  184 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E  184 (346)
                      |.......       ...+..++.++++++++.++ |||++||..+++.....            ......|...|..+|
T Consensus        76 g~~~~~~~-------~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------------~~~~~~~~~~~~~~e  136 (205)
T d1hdoa_          76 GTRNDLSP-------TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------PPRLQAVTDDHIRMH  136 (205)
T ss_dssp             CCTTCCSC-------CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------CGGGHHHHHHHHHHH
T ss_pred             ccCCchhh-------hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------------cccccccchHHHHHH
Confidence            76432111       13567789999999999998 89999999887642211            112245888899999


Q ss_pred             HHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC--
Q 019060          185 TLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN--  262 (346)
Q Consensus       185 ~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~--  262 (346)
                      ++++    ..+++++++||+.+++....                 ....+..++.....+++++|+|++++.+++++.  
T Consensus       137 ~~l~----~~~~~~tiirp~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~  195 (205)
T d1hdoa_         137 KVLR----ESGLKYVAVMPPHIGDQPLT-----------------GAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYD  195 (205)
T ss_dssp             HHHH----HTCSEEEEECCSEEECCCCC-----------------SCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTT
T ss_pred             HHHH----hcCCceEEEecceecCCCCc-----------------ccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCC
Confidence            8764    46899999999999874321                 123344556677789999999999999998876  


Q ss_pred             CCcEEec
Q 019060          263 TGPINIG  269 (346)
Q Consensus       263 ~~~~~~~  269 (346)
                      ++.+.+.
T Consensus       196 g~~~~~s  202 (205)
T d1hdoa_         196 GHSTYPS  202 (205)
T ss_dssp             TCEEEEE
T ss_pred             CEEEecC
Confidence            3445544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.4e-25  Score=185.24  Aligned_cols=195  Identities=21%  Similarity=0.233  Sum_probs=136.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC---cccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE---PLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~d~vi~~a~~  107 (346)
                      .|||||||||||||++|+++|+++|++ +|+++.|+....         .+.++....|+.+   .....+|+|||++|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~   72 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGT   72 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTTEECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------cccccccccchhhhhhccccchheeeeeeee
Confidence            379999999999999999999999932 566666643221         1233333333322   223358999999875


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHH
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETL  186 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~  186 (346)
                      ..  ............|+.++.+++++|++.++ +|+++||..+++.                  +.+.|+.+|..+|+.
T Consensus        73 ~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~------------------~~~~y~~~K~~~E~~  132 (212)
T d2a35a1          73 TI--KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK------------------SSIFYNRVKGELEQA  132 (212)
T ss_dssp             CH--HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT------------------CSSHHHHHHHHHHHH
T ss_pred             ec--cccccccccccchhhhhhhcccccccccccccccccccccccc------------------cccchhHHHHHHhhh
Confidence            42  23345567889999999999999999998 8999999887642                  225699999999998


Q ss_pred             HHHHHHHhCC-ceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCCCCc
Q 019060          187 MFDYHRQHGI-EIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       187 ~~~~~~~~~~-~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      ++.    .++ +++|+||+.|||+........    +    . ...+.....  ..+.+||++|+|++++.+++++..|.
T Consensus       133 l~~----~~~~~~~I~Rp~~v~G~~~~~~~~~----~----~-~~~~~~~~~--~~~~~i~v~DvA~ai~~~~~~~~~g~  197 (212)
T d2a35a1         133 LQE----QGWPQLTIARPSLLFGPREEFRLAE----I----L-AAPIARILP--GKYHGIEACDLARALWRLALEEGKGV  197 (212)
T ss_dssp             HTT----SCCSEEEEEECCSEESTTSCEEGGG----G----T-TCCCC------CHHHHHHHHHHHHHHHHHHTCCCSEE
T ss_pred             ccc----cccccceeeCCcceeCCcccccHHH----H----H-HHHHhhccC--CCCcEEEHHHHHHHHHHHHcCCCCCC
Confidence            753    355 599999999999974321111    1    1 111111111  23567999999999999999888777


Q ss_pred             EEecC
Q 019060          266 INIGN  270 (346)
Q Consensus       266 ~~~~~  270 (346)
                      +++.+
T Consensus       198 ~~~~~  202 (212)
T d2a35a1         198 RFVES  202 (212)
T ss_dssp             EEEEH
T ss_pred             EEEEH
Confidence            66543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=1.1e-23  Score=187.04  Aligned_cols=231  Identities=11%  Similarity=0.027  Sum_probs=162.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------CCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------IEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------~~~d~vi~~  104 (346)
                      .+|+|||||||||||++|+++|+++| |+|+++.|+..+.  ........++++++.+|+.+...      .++|.++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G-~~V~~l~R~~~~~--~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~   78 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGL--IAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFIN   78 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSH--HHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCC-CeEEEEECCcchh--hhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEee
Confidence            46899999999999999999999999 9999999975332  22333445689999999988532      368888876


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHH
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVA  183 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~  183 (346)
                      .....            ..++..+.+++++|.+.++ +++++||......              ....+...|..+|...
T Consensus        79 ~~~~~------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~--------------~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          79 TTSQA------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL--------------YGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             CCSTT------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG--------------TSSCCCCTTTHHHHHH
T ss_pred             ccccc------------chhhhhhhHHHHHHHHhCCCceEEEeecccccc--------------CCcccchhhhhhHHHH
Confidence            53221            2256678889999999997 8888888654321              1222334577888888


Q ss_pred             HHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcC-CCeEEecCCcceeecccH-HHHHHHHHHHHhCC
Q 019060          184 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRG-EPLTVQAPGTQTRSFCYV-SDMVDGLIRLMEGE  261 (346)
Q Consensus       184 E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v-~Dva~~i~~~~~~~  261 (346)
                      |.++.    ...++++++|++.+++.........+..   .....+ .....+.+++..+.++++ +|+++++..++...
T Consensus       133 ~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         133 ENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQM---ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBE---EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHH----hhccCceeeeeceeeccccccccccccc---cccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            87654    3478999999999887543221110000   001111 123344456777888876 79999999998654


Q ss_pred             C----CCcEEecCCCCCCHHHHHHHHHHHcCCCcceEEccC
Q 019060          262 N----TGPINIGNPGEFTMLELAENVKELINPNVEITMVEN  298 (346)
Q Consensus       262 ~----~~~~~~~~~~~~s~~ei~~~i~~~~g~~~~~~~~~~  298 (346)
                      .    +..|++++ +.+|+.|+++++.+++|++.++..++.
T Consensus       206 ~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~~~vp~  245 (350)
T d1xgka_         206 PQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVPK  245 (350)
T ss_dssp             HHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred             hhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceEEECCH
Confidence            2    44677765 679999999999999999887766553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.88  E-value=7.8e-23  Score=171.99  Aligned_cols=222  Identities=15%  Similarity=0.096  Sum_probs=148.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCe--EEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNE--VIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      +++|||||||||||+++++.|+++| ++  |+.+.|+.    ......  ..+++++.+|+.+...     .++|+|||+
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g-~~v~v~~~~R~~----~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~   75 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVRSA----QGKEKI--GGEADVFIGDITDADSINPAFQGIDALVIL   75 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTT-TTCEEEEEESCH----HHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCC-CcEEEEEEcCCH----HHHHhc--cCCcEEEEeeeccccccccccccceeeEEE
Confidence            5799999999999999999999999 65  55566643    122221  2478899999998754     379999999


Q ss_pred             ccCCCccc-------------cccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          105 ACPASPIF-------------YKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       105 a~~~~~~~-------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      ++......             ..........+|+.++.+++..+..... ++.+.|+...+.....           ...
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----------~~~  144 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP-----------LNK  144 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG-----------GGG
T ss_pred             EeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc-----------ccc
Confidence            98644221             1123455667889999999999988877 7888887665432100           011


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDM  250 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv  250 (346)
                      .....|...+...+    .+....+++++++||+.+||+.......          ..+.....   .....+++|++|+
T Consensus       145 ~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~~----------~~~~~~~~---~~~~~~~i~~~Dv  207 (252)
T d2q46a1         145 LGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVREL----------LVGKDDEL---LQTDTKTVPRADV  207 (252)
T ss_dssp             GGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSCE----------EEESTTGG---GGSSCCEEEHHHH
T ss_pred             ccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchhhh----------hhccCccc---ccCCCCeEEHHHH
Confidence            11233444444444    3445678999999999999996432100          00111110   1234579999999


Q ss_pred             HHHHHHHHhCCC--CCcEEecCCC---CCCHHHHHHHHHHHcC
Q 019060          251 VDGLIRLMEGEN--TGPINIGNPG---EFTMLELAENVKELIN  288 (346)
Q Consensus       251 a~~i~~~~~~~~--~~~~~~~~~~---~~s~~ei~~~i~~~~g  288 (346)
                      |++++.+++++.  +++||++++.   ..++.|+.+.+.++.+
T Consensus       208 a~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~  250 (252)
T d2q46a1         208 AEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTS  250 (252)
T ss_dssp             HHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred             HHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence            999999998776  5589998643   4567788777765543

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.82  E-value=7.7e-19  Score=146.54  Aligned_cols=208  Identities=16%  Similarity=0.124  Sum_probs=150.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|++++|+.    +.+.+..+..+...+.+|+++++..            ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G-~~V~~~~r~~----~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   78 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEG-ARLVACDIEE----GPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCH----HHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            47899999999999999999999999 9999999853    3333333344678899999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||...+..    ..++++..+++|+.++..+.+++..    .+. .++++||....+                 
T Consensus        79 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~-----------------  141 (242)
T d1ulsa_          79 DGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG-----------------  141 (242)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC-----------------
T ss_pred             eEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC-----------------
Confidence            99999999765433    2346788999999999988876643    233 577777754432                 


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+....    ............-++.         .+..
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~----~~~~~~~~~~~~~pl~---------R~~~  208 (242)
T d1ulsa_         142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK----VPEKVREKAIAATPLG---------RAGK  208 (242)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS----SCHHHHHHHHHTCTTC---------SCBC
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhc----CCHHHHHHHHhcCCCC---------CCCC
Confidence            2223579999999999999887764   6899999999998765322    1123333333332221         3557


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      .+|+|++++.++....    +.++.+.+|..
T Consensus       209 pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         209 PLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            8999999999886543    44677777654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2.1e-19  Score=150.18  Aligned_cols=210  Identities=16%  Similarity=0.139  Sum_probs=149.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|+++||||++.||++++++|+++| +.|++.+|+..... .+.+.+. .+...+.+|+++.+..            ++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G-~~Vv~~~r~~~~l~-~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARG-AKVIGTATSENGAQ-AISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHH-HHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHH-HHHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            47899999999999999999999999 99999998642222 2222222 3678899999987432            69


Q ss_pred             CEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||.......    .+++...+++|+.++..+.+++    ++.+ .++|++||...+.                +
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~----------------~  143 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM----------------G  143 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------------C
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcC----------------C
Confidence            999999997654432    3466788999999999888766    3344 3899999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+...    .+...........-++         ..+..
T Consensus       144 ~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl---------~R~~~  210 (243)
T d1q7ba_         144 NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR----ALSDDQRAGILAQVPA---------GRLGG  210 (243)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----TSCHHHHHHHHTTCTT---------SSCBC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhh----hhhhhHHHHHHhcCCC---------CCCCC
Confidence            2223579999999999999888764   789999999988654211    1112222222222221         13667


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+|+|++++.++....    ++.+.+.+|-
T Consensus       211 pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         211 AQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            8999999999986543    4567777654

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.80  E-value=6.9e-19  Score=146.27  Aligned_cols=201  Identities=16%  Similarity=0.138  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      ++|++|||||++.||++++++|+++| ++|++++|+....          ..+..+++|+++.+..            ++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~G-a~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADG-HKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            58999999999999999999999999 9999999964321          3467789999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||...+..    ..++++..+++|+.++..+.+++    ++.+. ++|++||.....                +
T Consensus        75 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~----------------~  138 (237)
T d1uzma1          75 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW----------------G  138 (237)
T ss_dssp             SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-------------------
T ss_pred             eEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhcc----------------C
Confidence            99999999765433    23567788999999988776644    44454 899999987642                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+   .++++..+.||.+..+...    .+...........-++         ..+..
T Consensus       139 ~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~pl---------~R~~~  205 (237)
T d1uzma1         139 IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR----ALDERIQQGALQFIPA---------KRVGT  205 (237)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH----HSCHHHHHHHGGGCTT---------CSCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhh----ccCHHHHHHHHhcCCC---------CCCcC
Confidence            222357999999999999988776   3789999999988754211    0011122222211111         13668


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+|+|++++.++....    +.++.+.+|
T Consensus       206 pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         206 PAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            8999999999886543    446777665

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-18  Score=146.07  Aligned_cols=211  Identities=17%  Similarity=0.126  Sum_probs=148.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEE
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQI  101 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~v  101 (346)
                      -.+|++|||||++.||++++++|+++| ++|++++|+.....+...+   .+++..+.+|+.+.+..        ++|++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G-~~V~~~~r~~~~l~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATG-ARVVAVSRTQADLDSLVRE---CPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH---STTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHh---cCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            457999999999999999999999999 9999999854322211111   24678899999987433        69999


Q ss_pred             EEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH-----cC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          102 YHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR-----VG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       102 i~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~-----~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      ||+||......    ..+++...+++|+.++..+.+++..     .+ .++|++||.....                +..
T Consensus        81 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----------------~~~  144 (244)
T d1pr9a_          81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AVT  144 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCT
T ss_pred             EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----------------ccc
Confidence            99999765433    3356778899999988887775432     22 3899999987652                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...+.+.+.++.+.   ++++..|.||.+..+........  ....+.....-++         ..+...+
T Consensus       145 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~~~pl---------~R~~~pe  213 (244)
T d1pr9a_         145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPL---------GKFAEVE  213 (244)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS--HHHHHHHHTTCTT---------CSCBCHH
T ss_pred             chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC--hHHHHHHHhcCCC---------CCCcCHH
Confidence            23579999999999999888764   78999999999876532111111  1222222322222         2367889


Q ss_pred             HHHHHHHHHHhCCC----CCcEEecCC
Q 019060          249 DMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       249 Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      |+|++++.++....    +.++.+.+|
T Consensus       214 evA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         214 HVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            99999999886543    446666664

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.80  E-value=1.1e-18  Score=145.50  Aligned_cols=206  Identities=15%  Similarity=0.080  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||+++++.|+++| ++|++.+|+.....+...+ + .....++.+|+++++..            ++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEG-AKVVFGDILDEEGKAMAAE-L-ADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHH-T-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-h-hCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 9999999864322222222 2 23678899999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..+++++.+++|+.++..+.+++    ++.+. ++|++||...+.                +
T Consensus        82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~----------------~  145 (244)
T d1nffa_          82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA----------------G  145 (244)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccc----------------c
Confidence            99999999765433    23567888999999998888754    33333 899999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..|.||.+..+.....             ......     .....+..
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-------------~~~~~~-----~pl~R~~~  207 (244)
T d1nffa_         146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-------------PEDIFQ-----TALGRAAE  207 (244)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-------------CTTCSC-----CSSSSCBC
T ss_pred             cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-------------hHHHHh-----ccccCCCC
Confidence            2233679999999999999888764   78999999998876532110             000000     11124778


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ++|+|++++.++....    +.++.+.+|..
T Consensus       208 p~diA~~v~fL~s~~s~~itG~~i~vDGG~~  238 (244)
T d1nffa_         208 PVEVSNLVVYLASDESSYSTGAEFVVDGGTV  238 (244)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHHhChhhCCCcCCEEEECCCee
Confidence            9999999999986432    44677776643

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.80  E-value=5.2e-19  Score=148.53  Aligned_cols=211  Identities=13%  Similarity=0.026  Sum_probs=149.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|.+|||||++.||++++++|+++| +.|++.+|+.....+...++.. ..++..+.+|+++.+..            +
T Consensus         9 enKvalITGas~GIG~a~a~~la~~G-a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSV-SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTS-SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999 9999999864322222222222 23678899999997433            6


Q ss_pred             CCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++||+||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||.....                
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------  151 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLT----------------  151 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcC----------------
Confidence            999999999765433    23567888999999998887754    44443 999999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+....    ............-++         ..+.
T Consensus       152 ~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~----~~~~~~~~~~~~~pl---------~R~~  218 (251)
T d2c07a1         152 GNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK----ISEQIKKNIISNIPA---------GRMG  218 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------CCHHHHHHHHTTCTT---------SSCB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccc----cCHHHHHHHHhcCCC---------CCCc
Confidence            22223579999999999999987764   7899999999998765321    123333333333222         1366


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ..+|+|++++.++....    +..+.+.+|
T Consensus       219 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         219 TPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            78999999999886543    446666665

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.80  E-value=1.4e-18  Score=145.52  Aligned_cols=212  Identities=15%  Similarity=0.112  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|.+|||||++.||+++++.|+++| +.|++.+|+.....+...+.. ..++..+.+|+++.+..            ++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~G-a~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEG-ADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999 999999986532222222222 24688899999997543            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||.....                +
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----------------~  145 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----------------K  145 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------------C
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc----------------c
Confidence            99999999765433    33567889999999999888765    44443 899999987642                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeeccc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCY  246 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  246 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..|.||.+..+.....   ........ .....       .....+..
T Consensus       146 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~-~~~~~-------~~l~r~~~  214 (247)
T d2ew8a1         146 IEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS---ALSAMFDV-LPNML-------QAIPRLQV  214 (247)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT-------SSSCSCCC
T ss_pred             CcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccc---ccchhHHH-HHHHh-------ccCCCCCC
Confidence            2233579999999999999888764   78999999998876542111   01111111 00000       01123567


Q ss_pred             HHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          247 VSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       247 v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+|+|++++.++....    +.++.+.+|
T Consensus       215 pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         215 PLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            8999999999886433    446776665

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.80  E-value=2.8e-18  Score=145.64  Aligned_cols=218  Identities=15%  Similarity=0.120  Sum_probs=150.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||+.++++|+++| +.|++++|+.....+...++.....+.++.+|+++.+..            ++
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYG-AKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999 999999986433333333333344678899999987543            69


Q ss_pred             CEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |++||+||......      ..++++..+++|+.++..+.+++    .+.+. ++|++||...+..              
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~--------------  149 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA--------------  149 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC--------------
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccc--------------
Confidence            99999999654321      22456788899999988888765    33444 8999998875421              


Q ss_pred             CCCCC-CCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          168 NPIGV-RSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       168 ~~~~~-~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        ..+ ...|+.+|...+.+.+.++.+.   ++++..|.||.+-.+......... .............+       ...
T Consensus       150 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~-------~gr  219 (268)
T d2bgka1         150 --GEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD-SSRVEELAHQAANL-------KGT  219 (268)
T ss_dssp             --CTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC-HHHHHHHHHHTCSS-------CSC
T ss_pred             --ccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC-HHHHHHHHHhcccc-------CCC
Confidence              111 1369999999999999887764   789999999999877532211111 11111111111111       113


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +...+|+|++++.++....    +.++.+.+|-.
T Consensus       220 ~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         220 LLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CcCHHHHHHHHHHHhChhhCCccCceEEECcCcc
Confidence            6678999999999986543    45677777643

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.80  E-value=5.5e-19  Score=147.94  Aligned_cols=213  Identities=14%  Similarity=0.074  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|.+.+|+... .+ ..+   ..+..++++|+++.+..            ++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G-~~V~~~~~~~~~-~~-~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREG-ALVALCDLRPEG-KE-VAE---AIGGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSTTH-HH-HHH---HHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHH-HH-HHH---HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999 999999986432 11 111   12457889999997443            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++|||||...+..    ..++++..+++|+.++..+.+++.    +.+. ++|++||...+.                +
T Consensus        78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~----------------~  141 (248)
T d2d1ya1          78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------A  141 (248)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------B
T ss_pred             CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----------------c
Confidence            99999999765433    234567889999999998887663    3343 899999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+.....  .........+.....-+         ...+
T Consensus       142 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p---------l~R~  212 (248)
T d2d1ya1         142 EQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA---------LRRL  212 (248)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST---------TSSC
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC---------CCCC
Confidence            2334679999999999999887764   78999999988765420000  00000001111111111         1236


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                      ...+|+|++++.++....    +..+.+.+|-..
T Consensus       213 ~~pedia~~v~fL~S~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         213 GKPEEVAEAVLFLASEKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCchhcCCCCcEEEcCcCccc
Confidence            678999999999886443    446888776543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.79  E-value=1.6e-18  Score=145.48  Aligned_cols=211  Identities=17%  Similarity=0.138  Sum_probs=146.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+...++  ...+.++.+|+++.+..            ++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAATAREL--GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTT--GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            47899999999999999999999999 99999998643222222221  13578899999987543            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||...+.                +
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----------------~  144 (254)
T d1hdca_          81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------G  144 (254)
T ss_dssp             CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------C
T ss_pred             cEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----------------c
Confidence            99999999765433    23456788999999998888765    33443 999999987652                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec-c
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF-C  245 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v  245 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..+.||.+..+.        .    ........-.. ........+ .
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~--------~----~~~~~~~~~~~-~~~~pl~R~g~  211 (254)
T d1hdca_         145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM--------T----AETGIRQGEGN-YPNTPMGRVGN  211 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH--------H----HHHTCCCSTTS-CTTSTTSSCB-
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc--------c----hhcCHHHHHHH-HhCCCCCCCCC
Confidence            2233579999999999999888764   6899999998886431        1    11111100000 000000112 3


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+|+|++++.++....    +..+.+.+|-.
T Consensus       212 ~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         212 EPGEIAGAVVKLLSDTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CHHHHHHHHHHHhchhhCCCCCceEEeCCCcc
Confidence            57999999999986543    45777777643

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.79  E-value=1.3e-18  Score=147.07  Aligned_cols=220  Identities=11%  Similarity=0.053  Sum_probs=145.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+.....+   ...++.++.+|+++.+..           
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~G-a~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999 999999986432222222211   124678899999997543           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       ++|++|||||......    ..+++...+++|+.++..+.+++    ++.+. ++|++||...+.              
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~--------------  147 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLV--------------  147 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeeccccccee--------------
Confidence             5999999999765433    23567788999999888877654    44454 999999987652              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeE---EecCCcc
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT---VQAPGTQ  240 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  240 (346)
                        +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+....    .+..............   .......
T Consensus       148 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~P  221 (260)
T d1x1ta1         148 --ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEK----QISALAEKNGVDQETAARELLSEKQP  221 (260)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHHCT
T ss_pred             --ccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhh----hhhhhhhhcCCChHHHHHHHHHhcCC
Confidence              22233579999999999999988764   6899999999887653211    1111100000000000   0000001


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      ...+...+|+|++++.++....    +.++.+.+|
T Consensus       222 l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         222 SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            1246789999999999886533    446777665

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.79  E-value=5.9e-19  Score=148.69  Aligned_cols=222  Identities=17%  Similarity=0.111  Sum_probs=150.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| ++|++.+|+.....+...++  ..++..+.+|+++++..            ++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~--~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREG-ARVAIADINLEAARATAAEI--GPAACAIALDVTDQASIDRCVAELLDRWGSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTT-EEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--CCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            46899999999999999999999999 99999998643222222222  24688899999997543            69


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||......    ..++++..+++|+.++..+.+++.    +.+  .++|++||...+-                
T Consensus        81 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------------  144 (256)
T d1k2wa_          81 DILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR----------------  144 (256)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------
T ss_pred             cEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc----------------
Confidence            99999999765433    235577889999999988887532    222  3899999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeE--EecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLT--VQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  243 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+..    ..................  ..........
T Consensus       145 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  220 (256)
T d1k2wa_         145 GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW----DGVDAKFADYENLPRGEKKRQVGAAVPFGR  220 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTH----HHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred             ccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhh----hhhhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence            22233579999999999999888764   78999999998877641    111111111000000000  0000000123


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                      +...+|+|++++.++....    +..+.+.+|..+|
T Consensus       221 ~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         221 MGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CcCHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            6678999999999886433    5578888876654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=2.1e-18  Score=145.08  Aligned_cols=214  Identities=14%  Similarity=0.104  Sum_probs=150.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      -.+|++|||||++.||++++++|+++| +.|++.+|+.....+...+... ..++..+.+|+++++..            
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999 9999999864322222222221 24678899999997443            


Q ss_pred             CCCEEEEcccCCCccc---cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||......   ..++++..+++|+.++..+.+++    ++.+. ++|++||...+.                
T Consensus        88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~----------------  151 (255)
T d1fmca_          88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN----------------  151 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------
T ss_pred             CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhc----------------
Confidence            6999999999765433   23567788999999988887755    33344 899999987652                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecc
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFC  245 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  245 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..|.||.+..+.......   +.........-++.         .+.
T Consensus       152 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---~e~~~~~~~~~pl~---------R~g  219 (255)
T d1fmca_         152 KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQHTPIR---------RLG  219 (255)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC---HHHHHHHHHTCSSC---------SCB
T ss_pred             cccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC---HHHHHHHHhcCCCC---------CCc
Confidence            22233579999999999999888764   7899999999986543211111   22333333332221         356


Q ss_pred             cHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          246 YVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       246 ~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .++|+|++++.++....    +.++.+.+|.
T Consensus       220 ~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         220 QPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            78999999999986543    4467777764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.79  E-value=3.6e-19  Score=149.51  Aligned_cols=212  Identities=14%  Similarity=0.075  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+.........++.++.+|+++.+..            ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEG-AKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            47999999999999999999999999 999999986433222222222334688999999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC--CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG--ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      |++||+||......    ..+++...+++|+.++..+.+++    ++.+  .++|++||...+-                
T Consensus        84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----------------  147 (251)
T d1zk4a1          84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------
T ss_pred             eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----------------
Confidence            99999999765433    23456788999999998888765    3333  3799999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                      +......|+.+|...+.+.+.++.+     +++++..|.||.+..+.......   ......  ....++       ...
T Consensus       148 ~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~---~~~~~~--~~~~~p-------l~R  215 (251)
T d1zk4a1         148 GDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---AEEAMS--QRTKTP-------MGH  215 (251)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---HHHHHT--STTTCT-------TSS
T ss_pred             cCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC---HHHHHH--HHhCCC-------CCC
Confidence            1222357999999999998877654     36899999999886542110000   111110  111111       124


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +...+|+|++++.++....    +..+.+.+|
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         216 IGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence            6788999999999886433    446777665

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.78  E-value=1.6e-18  Score=146.25  Aligned_cols=213  Identities=14%  Similarity=0.043  Sum_probs=149.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+...+.+.  ..++..+.+|+++.+..            
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G-~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEK-AKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999 9999999864322222222221  23577899999997443            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC--eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA--RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~--r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||...+..    ..+++...+++|+.++..+.+++    ++.+.  .+|++||.....              
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~--------------  150 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI--------------  150 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--------------
T ss_pred             CCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc--------------
Confidence            6999999999765433    23567788999999988887654    33343  588999987542              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCcce
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                        +......|+.+|...+.+.+.++.+.   ++++..|.||.+..+..    ....  +.........-++         
T Consensus       151 --~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~----~~~~~~~~~~~~~~~~~pl---------  215 (261)
T d1geea_         151 --PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN----AEKFADPEQRADVESMIPM---------  215 (261)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGG----HHHHHSHHHHHHHHTTCTT---------
T ss_pred             --cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhH----hhhcCCHHHHHHHHhcCCC---------
Confidence              22223579999999999999887764   79999999999876531    1111  1122222222221         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+...+|+|++++.++....    +..+.+.+|..
T Consensus       216 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCee
Confidence            135678999999999886543    45777777654

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=1.9e-18  Score=144.94  Aligned_cols=213  Identities=17%  Similarity=0.098  Sum_probs=149.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||++.||+.++++|+++| +.|.+.+|+.....+...+...  ..++..+.+|+++++..            
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAG-CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999 9999999864333222222211  23678899999997433            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      ++|++||+||......    ..++++..+++|+.++..+.+++.    +.+. ++|++||.....               
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~---------------  147 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE---------------  147 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc---------------
Confidence            6999999999755433    335677889999999988887653    3333 899999865421               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH--HHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV--SNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                      .+......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+...    ...  +.........-++.         
T Consensus       148 ~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~~~pl~---------  214 (251)
T d1vl8a_         148 VTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE----AVFSDPEKLDYMLKRIPLG---------  214 (251)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTH----HHHTCHHHHHHHHHTCTTS---------
T ss_pred             ccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHH----hccCCHHHHHHHHhcCCCC---------
Confidence            011223569999999999999887764   799999999999766421    111  22333333332221         


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+..++|+|++++.++....    +.++.+.+|-
T Consensus       215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~  248 (251)
T d1vl8a_         215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  248 (251)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCe
Confidence            35577999999999886543    4467776653

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.6e-18  Score=144.53  Aligned_cols=210  Identities=19%  Similarity=0.139  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------CCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------EVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~d~vi  102 (346)
                      .+|++|||||++.||+.++++|+++| ++|++++|+.....+.. +  +.+++..+.+|+++.+..        ++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~-~--~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASG-AKVVAVTRTNSDLVSLA-K--ECPGIEPVCVDLGDWDATEKALGGIGPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHH-H--HSTTCEEEECCTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHH-H--hcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEE
Confidence            47999999999999999999999999 99999998542211111 1  134688899999987543        699999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----c-C-CeEEEEecccccCCCCCCCCCCCCcCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-G-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIGV  172 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~  172 (346)
                      ||||......    ..++++..+++|+.++..+.+++..    . . .++|++||...+.                +...
T Consensus        80 nnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~~~  143 (242)
T d1cyda_          80 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TFPN  143 (242)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCTT
T ss_pred             ECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----------------cCCc
Confidence            9999765433    3345678899999999988875432    2 2 3899999987642                2222


Q ss_pred             CCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          173 RSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       173 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      ...|+.+|...+.+.+.++.+.   ++++..|.||.+..+........  +.........-++         ..+...+|
T Consensus       144 ~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~pl---------~R~~~pee  212 (242)
T d1cyda_         144 LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKLKERHPL---------RKFAEVED  212 (242)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHHHHHSTT---------SSCBCHHH
T ss_pred             cccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--HHHHHHHHhcCCC---------CCCcCHHH
Confidence            3579999999999999888764   68999999998875421000000  1222222222111         23667899


Q ss_pred             HHHHHHHHHhCCC----CCcEEecCC
Q 019060          250 MVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       250 va~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      +|++++.++....    +.++.+.+|
T Consensus       213 va~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         213 VVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             HHHHHHHHhCchhcCcCCceEEeCcc
Confidence            9999999886543    446777665

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.78  E-value=4e-18  Score=143.56  Aligned_cols=218  Identities=16%  Similarity=0.147  Sum_probs=150.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|++|||||++.||+.++++|+++| +.|.+.+|+.....+...+.   ....++..+.+|+++++..           
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999 99999998643222222211   1233678899999997543           


Q ss_pred             -CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 -EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                       ++|++|||||...+..     ..++++..+++|+.++..+.+++    ++.+ .++|++||...+-             
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------  148 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------  148 (258)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS-------------
T ss_pred             CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc-------------
Confidence             5999999999654321     33567889999999999988765    2233 4899999987642             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC----CccHHHHHHHHHHcCCCeEEecCC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID----DGRVVSNFIAQAIRGEPLTVQAPG  238 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  238 (346)
                         +......|+.+|...+.+.+.++.+.   ++++..+.||.+..|.....    ...............-++      
T Consensus       149 ---~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl------  219 (258)
T d1iy8a_         149 ---GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------  219 (258)
T ss_dssp             ---BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------
T ss_pred             ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC------
Confidence               22234679999999999999887764   79999999998875421000    000011122222222222      


Q ss_pred             cceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCC
Q 019060          239 TQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEF  274 (346)
Q Consensus       239 ~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~  274 (346)
                         ..+...+|+|++++.++....    +.++.+.+|...
T Consensus       220 ---~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         220 ---KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             ---CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             ---CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence               235678999999999886533    446888777543

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1.3e-18  Score=146.57  Aligned_cols=215  Identities=17%  Similarity=0.085  Sum_probs=136.1

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC-----------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~-----------   96 (346)
                      +..+|++|||||++.||++++++|+++| +.|++++|+.....+...+... ..++..+.+|+++.+..           
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFG-AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4458999999999999999999999999 9999999864332222222211 23688899999986322           


Q ss_pred             --CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 --EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                        .+|++||+||......    ..++++..+++|+.++..+.+++    ++.+ .++|++||.....             
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~-------------  150 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV-------------  150 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccc-------------
Confidence              4999999999765433    33567888999999998888765    3334 4999999987542             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                         +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+.....   .-....+.....-+         ..
T Consensus       151 ---~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~p---------l~  215 (259)
T d1xq1a_         151 ---SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV---YDDEFKKVVISRKP---------LG  215 (259)
T ss_dssp             -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------
T ss_pred             ---cccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh---chHHHHHHHHhCCC---------CC
Confidence               22223579999999999999887764   79999999999876542110   00111111111111         12


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      .+...+|+|++++.++....    +..+.+.+|-
T Consensus       216 R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         216 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            35678999999999886432    3456666653

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3.3e-18  Score=143.20  Aligned_cols=215  Identities=17%  Similarity=0.158  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||+++++.|+++| +.|++.+|+..... .+.+.  .++..++.+|+++.+..            ++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~-~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSG-ARVVICDKDESGGR-ALEQE--LPGAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHH-HHHHH--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHH-HHHHh--cCCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999 99999998532211 12221  24688899999997543            59


Q ss_pred             CEEEEcccCCCcc-c----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           99 DQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        99 d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      |++||+||..... .    ..++++..+++|+.++..+.+++    ++.+.++|++||....-                +
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~----------------~  144 (250)
T d1ydea1          81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI----------------G  144 (250)
T ss_dssp             CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHH----------------C
T ss_pred             CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccc----------------c
Confidence            9999999965322 1    22457788999999998888765    34445999999987642                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCC--CCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNI--DDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..|.||.|..+....  ....-....+.......++         ..+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~  215 (250)
T d1ydea1         145 QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL---------GRM  215 (250)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT---------SSC
T ss_pred             ccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC---------CCC
Confidence            2223579999999999999888764   7999999999886432100  0000011222222222222         136


Q ss_pred             ccHHHHHHHHHHHHhCCC---CCcEEecCCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN---TGPINIGNPGEF  274 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~  274 (346)
                      ...+|+|++++.++....   +.++.+.+|..+
T Consensus       216 g~p~eva~~v~fL~Sda~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         216 GQPAEVGAAAVFLASEANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTS
T ss_pred             CCHHHHHHHHHHHhCccCCCcCCeEEECCCccc
Confidence            688999999998886432   446777776543

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.77  E-value=3.6e-18  Score=142.63  Aligned_cols=209  Identities=14%  Similarity=0.033  Sum_probs=145.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------CCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      .||||||++.||++++++|+++| +.|++.+++.....+.+.+.+.  ..++.++.+|+++.+..            ++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~G-a~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAG-CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999 9998876543222222222221  23677899999997433            699


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      ++||+||......    ..+++++.+++|+.++..+.+++    ++.+. ++|++||...+-                +.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~----------------~~  145 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI----------------GN  145 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH----------------CC
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC----------------CC
Confidence            9999999765433    33567789999999998887765    33444 999999987642                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccH
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYV  247 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  247 (346)
                      .....|+.+|...+.+.+.++.+.   ++++..+.||.+-.+...    .+.....+.....-++         ..+...
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl---------~R~~~p  212 (244)
T d1edoa_         146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTA----KLGEDMEKKILGTIPL---------GRTGQP  212 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHH----TTCHHHHHHHHTSCTT---------CSCBCH
T ss_pred             CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHH----HhhHHHHHHHHhcCCC---------CCCcCH
Confidence            223579999999999999888774   789999999988654211    1112333333322222         136678


Q ss_pred             HHHHHHHHHHH-hCCC----CCcEEecCCC
Q 019060          248 SDMVDGLIRLM-EGEN----TGPINIGNPG  272 (346)
Q Consensus       248 ~Dva~~i~~~~-~~~~----~~~~~~~~~~  272 (346)
                      +|+|++++.++ ....    +..+.+.+|-
T Consensus       213 ~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         213 ENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            99999999885 3322    4467776653

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.76  E-value=1.2e-18  Score=146.42  Aligned_cols=209  Identities=18%  Similarity=0.172  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+ +.+.+. .+..++.+|+++.+..            ++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G-a~V~~~~~~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEG-AKVAFSDINEAAGQQ-LAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHH-HHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 999999985432222 222222 4577889999987443            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPI  170 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~  170 (346)
                      |++||+||...+..    ..++++..+++|+.++..+.+++    ++.+.++|++||...+-                +.
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~----------------~~  145 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------PI  145 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------CC
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc----------------Cc
Confidence            99999999765433    23557889999999888877765    33345899999987642                22


Q ss_pred             CCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHH-----HHHHcCCCeEEecCCcc
Q 019060          171 GVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFI-----AQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       171 ~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  240 (346)
                      .....|+.+|...+.+.+.++.+.     ++++..+.||.+..+.        ....+     +.......     ....
T Consensus       146 ~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~--------~~~~~~~~~~~~~~~~~~-----~~~~  212 (253)
T d1hxha_         146 EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM--------MQASLPKGVSKEMVLHDP-----KLNR  212 (253)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH--------HHHHSCTTCCHHHHBCBT-----TTBT
T ss_pred             cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHh--------HHhhCcchhhHHHHHhCc-----cccc
Confidence            233579999999999988776543     4889999999886542        11100     01111100     0011


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .-.+...+|+|++++.++....    +..+++.+|
T Consensus       213 ~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            1246678999999999886443    445777665

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.76  E-value=5.6e-18  Score=142.82  Aligned_cols=216  Identities=13%  Similarity=0.042  Sum_probs=149.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      -.+|++|||||++.||++++++|+++| +.|++.+|+.....+...++.. ..++.++.+|+++.+..            
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLG-ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999999 9999999864333322222222 23577899999986321            


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .+|++||+||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||.....              
T Consensus        85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~--------------  150 (259)
T d2ae2a_          85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--------------  150 (259)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS--------------
T ss_pred             CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc--------------
Confidence             4899999999765433    23467789999999998887765    33343 899999987642              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC-CccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID-DGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+..... ........+......-++.         
T Consensus       151 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~---------  219 (259)
T d2ae2a_         151 --AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR---------  219 (259)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC---------
T ss_pred             --ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC---------
Confidence              22223579999999999999988763   78999999998865421000 0111122233333332221         


Q ss_pred             ecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                      .+...+|+|++++.++....    +..+.+.+|
T Consensus       220 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         220 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            35678999999999886543    445666665

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.76  E-value=8.2e-18  Score=141.91  Aligned_cols=215  Identities=15%  Similarity=0.068  Sum_probs=146.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .+|++|||||++.||+++++.|+++| +.|++++|+.....+....... ..++..+.+|+++.+..            +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEG-TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 9999999864322222222221 23678899999987433            6


Q ss_pred             CCEEEEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           98 VDQIYHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        98 ~d~vi~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      +|++||+||.... ..    ..+++...+++|+.++..+.+++.    +.+. ++|++||...+.               
T Consensus        83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~---------------  147 (260)
T d1zema1          83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK---------------  147 (260)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHS---------------
T ss_pred             CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhcc---------------
Confidence            9999999996543 21    234677888999999988887653    3333 899999987653               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCC------------CCccHHHHHHHHHHcCCCe
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNI------------DDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~------------~~~~~~~~~~~~~~~~~~~  232 (346)
                       +......|+.+|...+.+.+.++.+.   ++++..+.||.|-.+....            ..........+.+...-++
T Consensus       148 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  226 (260)
T d1zema1         148 -GPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM  226 (260)
T ss_dssp             -CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC
Confidence             22223579999999999999888764   6899999999987552100            0000011112222222221


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                               ..+...+|+|++++.++....    +.++.+.+|
T Consensus       227 ---------~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         227 ---------RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             ---------SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             ---------CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence                     135678999999999987543    345666553

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.76  E-value=4e-18  Score=143.52  Aligned_cols=216  Identities=18%  Similarity=0.067  Sum_probs=144.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~d   99 (346)
                      |.+|||||++.||++++++|+++| +.|++.+|+.....+...++.. ..++..+.+|+++.+..            ++|
T Consensus         2 KValITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDG-FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            346999999999999999999999 9999999864322222222211 23678899999997433            699


Q ss_pred             EEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060          100 QIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVG--ARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus       100 ~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      ++||+||......    ..++++..+++|+.++..+.+++.    +.+  .++|++||...+.                +
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------~  144 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------------G  144 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------C
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----------------c
Confidence            9999999765433    234567889999999998887642    333  2799999987642                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHH--cCCCeE----EecCCcc
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAI--RGEPLT----VQAPGTQ  240 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~  240 (346)
                      ......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+.        ...+.....  .+....    -......
T Consensus       145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p  216 (255)
T d1gega_         145 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM--------WAEIDRQVSEAAGKPLGYGTAEFAKRIT  216 (255)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH--------HHHHHHHHHHHHTCCTTHHHHHHHTTCT
T ss_pred             CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH--------HhhhhhhhHhhhcccchhHHHHHHhcCC
Confidence            2233579999999999999887664   7899999999886442        122211111  000000    0000001


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ...+...+|+|++++.++....    +..+.+.+|-.
T Consensus       217 l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         217 LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            1236678999999999886443    44677776643

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.76  E-value=2.8e-18  Score=144.71  Aligned_cols=214  Identities=15%  Similarity=0.075  Sum_probs=147.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------CC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      +|.+|||||++.||++++++|+++| +.|++.+|+.....+...++.. ..++..+.+|+++++..            ++
T Consensus         2 gKValITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEG-LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999999999999 9999999864322222222211 23678899999997543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH------cCC-eEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR------VGA-RILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                      |++|||||......    ..++++..+++|+.++..+.+++..      .+. ++|++||...+.               
T Consensus        81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~---------------  145 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------  145 (257)
T ss_dssp             SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS---------------
T ss_pred             CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc---------------
Confidence            99999999765433    3356778999999999999987743      233 799999987642               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC-------CccHHHHHHHHHHcCCCeEEecC
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID-------DGRVVSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
                       +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+.....       ...............-++     
T Consensus       146 -~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-----  219 (257)
T d2rhca1         146 -GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-----  219 (257)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-----
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-----
Confidence             22233579999999999999998874   58899999988864320000       000011122222222111     


Q ss_pred             CcceeecccHHHHHHHHHHHHhCCC----CCcEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~  271 (346)
                          ..+...+|+|++++.++....    +..+.+.+|
T Consensus       220 ----gR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         220 ----GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             ----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence                136678999999999886433    446777665

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.76  E-value=1.4e-17  Score=140.20  Aligned_cols=216  Identities=14%  Similarity=0.057  Sum_probs=147.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      -.+|++|||||++.||++++++|+++| +.|++++|+.....+..+.... ...+.++.+|+.+.+..            
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G-~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLG-ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            358999999999999999999999999 9999999964332222222221 24577889999987432            


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .+|+++|+||......    ..+++...+++|+.++..+.+++.    +.+. ++|++||.....              
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~--------------  148 (258)
T d1ae1a_          83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--------------  148 (258)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTS--------------
T ss_pred             CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccc--------------
Confidence             3899999999765432    335678899999999988877653    3334 899999988753              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC--ccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD--GRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.++.||.+..+......  ..............-++         
T Consensus       149 --~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------  217 (258)
T d1ae1a_         149 --ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM---------  217 (258)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT---------
T ss_pred             --ccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC---------
Confidence              22223579999999999999888764   689999999999876421110  00112222222222212         


Q ss_pred             eecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ..+...+|+|.+++.++....   .| .+.+.+|
T Consensus       218 gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence            136788999999999996432   44 5666655

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.75  E-value=1.2e-17  Score=140.85  Aligned_cols=216  Identities=13%  Similarity=0.029  Sum_probs=144.6

Q ss_pred             cCCCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh-cCCCCeeEEecccCCcccC---------
Q 019060           29 FQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~---------   96 (346)
                      +..+|++|||||+|  .||++++++|+++| +.|++.+|+.... ....+. ........+.+|+++.+..         
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~G-a~V~i~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAG-AEVALSYQAERLR-PEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTT-CEEEEEESSGGGH-HHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEeCcHHHH-HHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            44679999999998  79999999999999 9998888754221 111111 1223567899999987433         


Q ss_pred             ---CCCEEEEcccCCCccc--------cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCC
Q 019060           97 ---EVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                         ++|++||+|+......        ...++...+++|+.+...+.+++...   +.++|++||.....          
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~----------  152 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----------  152 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS----------
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC----------
Confidence               5999999998654221        12345667889999999888877543   23799999987642          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+.   ++++..+.||.+..+......  ............-++       
T Consensus       153 ------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~--~~~~~~~~~~~~~pl-------  217 (256)
T d1ulua_         153 ------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP--GFTKMYDRVAQTAPL-------  217 (256)
T ss_dssp             ------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------CHHHHHHHHHHSTT-------
T ss_pred             ------CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh--hhHHHHHHHHhcCCC-------
Confidence                  22233579999999999999888764   799999999998766432111  012223332222222       


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                        ..+...+|+|++++.++....    +..+.+.+|..
T Consensus       218 --~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         218 --RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             --SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             --CCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence              135678999999999987543    44677766643

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.75  E-value=8.2e-18  Score=140.22  Aligned_cols=210  Identities=17%  Similarity=0.147  Sum_probs=147.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||+.++++|+++| ++|++.+|+.....+...+ + ..++.++++|+.+++..            ++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREG-ASLVAVDREERLLAEAVAA-L-EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHT-C-CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHH-c-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            47899999999999999999999999 9999999864322222222 1 23678899999987543            59


Q ss_pred             CEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcCC--e-EEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060           99 DQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVGA--R-ILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus        99 d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r-~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |++||+|+......    ..+++...+++|+.+...+.+++...-.  + ++++||.+..                 +..
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----------------~~~  143 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----------------GAF  143 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----------------CHH
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----------------ccc
Confidence            99999998654432    2345678889999999999988765432  3 4444444322                 111


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ....|+.+|...|.+.+.++.+.   ++++.++.||.+-.+...    .+...........-++.         .+..++
T Consensus       144 ~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~----~~~~~~~~~~~~~~p~~---------r~~~p~  210 (241)
T d2a4ka1         144 GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTA----GLPPWAWEQEVGASPLG---------RAGRPE  210 (241)
T ss_dssp             HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGT----TSCHHHHHHHHHTSTTC---------SCBCHH
T ss_pred             CccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHH----hhhHhHHHHHHhCCCCC---------CCcCHH
Confidence            23569999999999999998875   589999999998655321    12233333333332221         366789


Q ss_pred             HHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          249 DMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       249 Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      |+|++++.++....    +.++.+.+|..
T Consensus       211 dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         211 EVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            99999999997543    44677777654

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.2e-18  Score=144.77  Aligned_cols=216  Identities=14%  Similarity=0.118  Sum_probs=147.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc------CCCCeeEEecccCCcccC--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI------GHPRFELIRHDVTEPLLI--------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~~~d~~~~~~~--------   96 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+...++.      ...++..+.+|+++.+..        
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~G-a~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELG-SNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999 999999996433222222211      123678899999997543        


Q ss_pred             ----CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           97 ----EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----VGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                          ++|++||+||......    ..++++..+++|+.++..+.+++..    .+. ++|++||....+           
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-----------  158 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-----------  158 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-----------
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-----------
Confidence                6999999998654332    2356778899999999988877643    223 677776644321           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                            ......|+.+|...+.+.+.++.+.   ++++..|.||.|..+.........-..+.......-+         
T Consensus       159 ------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~p---------  223 (297)
T d1yxma1         159 ------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP---------  223 (297)
T ss_dssp             ------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST---------
T ss_pred             ------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCC---------
Confidence                  1123569999999999999988764   7899999999997664211111111111111111111         


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ...+...+|+|++++.++....    +.++.+.+|..
T Consensus       224 lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         224 AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            1236678999999999996543    45677777654

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.75  E-value=5.5e-17  Score=134.66  Aligned_cols=204  Identities=16%  Similarity=0.142  Sum_probs=144.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc------ccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP------LLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~------~~~~~d~vi~~  104 (346)
                      .+|++|||||++.||++++++|+++| ++|++.+|+.    +.+.+    ...+++.+|+.+.      ...++|++||+
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~G-a~V~~~~r~~----~~l~~----~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEG-AEVTICARNE----ELLKR----SGHRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTT-CEEEEEESCH----HHHHH----TCSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCH----HHHHh----cCCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            47899999999999999999999999 9999999853    22222    3457788998874      22369999999


Q ss_pred             ccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCc
Q 019060          105 ACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSC  175 (346)
Q Consensus       105 a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~  175 (346)
                      ||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||.....                +......
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~----------------~~~~~~~  137 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVIS----------------PIENLYT  137 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------CCTTBHH
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccc----------------ccccccc
Confidence            99654433    23456778899999888777655    44444 899999987642                2333457


Q ss_pred             hHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHH-HHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          176 YDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVV-SNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       176 Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      |+.+|...+.+.+.++.+.   ++++..|.||.+-.+...    ..+ ..........-++         ..+...+|+|
T Consensus       138 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~----~~~~~~~~~~~~~~~pl---------~R~~~pediA  204 (234)
T d1o5ia_         138 SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVK----ELLSEEKKKQVESQIPM---------RRMAKPEEIA  204 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHH----HHSCHHHHHHHHTTSTT---------SSCBCHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhh----hhcCHHHHHHHHhcCCC---------CCCcCHHHHH
Confidence            9999999999999887764   789999999988766421    111 1122222222221         2366889999


Q ss_pred             HHHHHHHhCCC----CCcEEecCCC
Q 019060          252 DGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       252 ~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ++++.++....    ++++.+.+|-
T Consensus       205 ~~v~fL~S~~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         205 SVVAFLCSEKASYLTGQTIVVDGGL  229 (234)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhChhhcCCcCcEEEECccc
Confidence            99999886443    4467776653

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.7e-18  Score=145.75  Aligned_cols=217  Identities=16%  Similarity=0.134  Sum_probs=145.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|++|||||++.||++++++|+++| +.|++++|+.....+...++.   ...++.++.+|+++.+..            
T Consensus         3 GKvalITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           3 GKVALVTGAAQGIGRAFAEALLLKG-AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999 999999996533222222222   223678899999997543            


Q ss_pred             CCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHH----HHcC----CeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLA----KRVG----ARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~----~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||...    ..++++.+++|+.+...+..++    .+..    .++|++||...+-                
T Consensus        82 ~iDilVnnAg~~~----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~----------------  141 (254)
T d2gdza1          82 RLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM----------------  141 (254)
T ss_dssp             CCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS----------------
T ss_pred             CcCeecccccccc----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc----------------
Confidence            6999999998754    3567788899998877766654    2322    2699999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHH--HHH---HhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEE---ecCCcc
Q 019060          169 PIGVRSCYDEGKRVAETLMFD--YHR---QHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV---QAPGTQ  240 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~--~~~---~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  240 (346)
                      +......|+.+|...+.+.+.  ++.   ..++++..|.||.+-.+..        ..+......+.....   ..+.-.
T Consensus       142 ~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~--------~~~~~~~~~~~~~~~~~~~~~~~p  213 (254)
T d2gdza1         142 PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL--------ESIEKEENMGQYIEYKDHIKDMIK  213 (254)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHH--------HGGGCHHHHGGGGGGHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhh--------hhccccccccccHHHHHHHHhcCC
Confidence            222335799999999998875  232   3478999999998854321        110000000000000   000000


Q ss_pred             eeecccHHHHHHHHHHHHhCCC--CCcEEecCCCCCCHH
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGEFTML  277 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~~s~~  277 (346)
                      ...+...+|+|++++.++..+.  +.++.+.+|..+.++
T Consensus       214 ~~r~~~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~  252 (254)
T d2gdza1         214 YYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ  252 (254)
T ss_dssp             HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECCCCeeecc
Confidence            1135678999999999998664  557888887765544

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3e-17  Score=137.11  Aligned_cols=213  Identities=15%  Similarity=0.065  Sum_probs=148.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc--------CCCCEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL--------IEVDQIY  102 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~--------~~~d~vi  102 (346)
                      .+|++|||||++.||+.++++|+++| ++|++.+|+.    +.+.+.....++....+|+.+.+.        .++|++|
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G-~~Vi~~~r~~----~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV   79 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREG-AKVIATDINE----SKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESCH----HHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCH----HHHHHHHhccCCceeeeeccccccccccccccccceeEE
Confidence            46899999999999999999999999 9999999853    344444455677888888776532        2699999


Q ss_pred             EcccCCCccc----cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCC
Q 019060          103 HLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVR  173 (346)
Q Consensus       103 ~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~  173 (346)
                      |+||......    ..+++...+++|+.++..+.+++.    +.+. ++|++||...--               .+....
T Consensus        80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---------------~~~~~~  144 (245)
T d2ag5a1          80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------------KGVVNR  144 (245)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---------------BCCTTB
T ss_pred             ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---------------CCccch
Confidence            9999766543    234677888999999998877654    3333 899999865310               122334


Q ss_pred             CchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCC--CccHHHHHHHHHHcCCCeEEecCCcceeecccHH
Q 019060          174 SCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNID--DGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVS  248 (346)
Q Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  248 (346)
                      ..|+.+|...+.+.+.++.+.   ++++..|.||.+-.|.....  ...............-++         ..+...+
T Consensus       145 ~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pe  215 (245)
T d2ag5a1         145 CVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT---------GRFATAE  215 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT---------SSCEEHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC---------CCCcCHH
Confidence            679999999999999988764   78999999998876531000  000011122222222222         1366789


Q ss_pred             HHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          249 DMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       249 Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      |+|++++.++....    +..+.+.+|.
T Consensus       216 dva~~v~fL~s~~s~~iTG~~i~VDGG~  243 (245)
T d2ag5a1         216 EIAMLCVYLASDESAYVTGNPVIIDGGW  243 (245)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHHHHHHHHhChhhCCCcCceEEeCCCc
Confidence            99999999997543    4467777654

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.74  E-value=1.6e-17  Score=140.24  Aligned_cols=221  Identities=16%  Similarity=0.098  Sum_probs=149.5

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC----------
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~----------   96 (346)
                      .-++|++|||||++.||++++++|+++| +.|++++|+.....+...+...  ..++..+.+|+++++..          
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAG-ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   84 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457999999999999999999999999 9999999976544333333221  24678899999997543          


Q ss_pred             --CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHH----c-CC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 --EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKR----V-GA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                        ++|++||+||......    ..++++..+++|+.++..+.+++..    . .. +++.+||...+.......      
T Consensus        85 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~------  158 (260)
T d1h5qa_          85 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL------  158 (260)
T ss_dssp             SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET------
T ss_pred             hCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc------
Confidence              5999999999765433    2345678889999988888765432    2 33 566666665432110000      


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                         ........|+.+|...+.+.+.++.+   .++++..|.||.+-.+....    ............-++.        
T Consensus       159 ---~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~----~~~~~~~~~~~~~pl~--------  223 (260)
T d1h5qa_         159 ---NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH----MDKKIRDHQASNIPLN--------  223 (260)
T ss_dssp             ---TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG----SCHHHHHHHHHTCTTS--------
T ss_pred             ---ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhc----cCHHHHHHHHhcCCCC--------
Confidence               01122356999999999999988766   47899999999987654221    1123333333322221        


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                       .+...+|+|++++.++....    +.++.+.+|.
T Consensus       224 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         224 -RFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             -SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             -CCcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence             35578999999999886543    4467777664

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.73  E-value=2.4e-17  Score=139.42  Aligned_cols=216  Identities=12%  Similarity=0.027  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~----------   96 (346)
                      .+|.+|||||++.||++++++|+++| +.|++.+|+.....+...++.    ...++.++.+|+++.+..          
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREG-AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999 999999986432222222221    123588999999987443          


Q ss_pred             --CCCEEEEcccCCCccc--------cccChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEeccc-ccCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIF--------YKYNPVKTIKTNVIGTLNMLGLAK----RVGARILLTSTSE-VYGDPLVHPQDE  161 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS~~-v~~~~~~~~~~e  161 (346)
                        ++|++|||||...+..        ..++++..+++|+.+...+.+++.    +.+.++|.++|.. ...         
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~---------  153 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH---------  153 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS---------
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccc---------
Confidence              6999999998653211        224567889999999888877653    3344666666543 221         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-----ccHHHHHHHHHHcCCCeE
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-----GRVVSNFIAQAIRGEPLT  233 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~  233 (346)
                             +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+......     ..............-++ 
T Consensus       154 -------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-  225 (264)
T d1spxa_         154 -------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-  225 (264)
T ss_dssp             -------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-
T ss_pred             -------cCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-
Confidence                   22223569999999999999887764   799999999998765321110     00011111111111111 


Q ss_pred             EecCCcceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCC
Q 019060          234 VQAPGTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPG  272 (346)
Q Consensus       234 ~~~~~~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~  272 (346)
                              ..+...+|+|++++.++..+    - +..+.+.+|.
T Consensus       226 --------~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~  261 (264)
T d1spxa_         226 --------GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  261 (264)
T ss_dssp             --------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             --------CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence                    13567899999999988532    2 4467776654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.73  E-value=6.1e-17  Score=137.67  Aligned_cols=218  Identities=17%  Similarity=0.112  Sum_probs=145.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc--CCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI--GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..+|++|||||++.||++++++|+++| +.|++++|+..+..+...+.+  ....+..+.+|+.+++..           
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRG-CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            457999999999999999999999999 999999885433222222221  124688899999997443           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                       ++|++||+++......    ...+....+++|+.++..+.+++...   ..++++++|.....               .
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~---------------~  159 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA---------------K  159 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC---------------S
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc---------------c
Confidence             5999999999765433    23456778899999999998877643   23777777764321               1


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCC-------CCCCccHHHH-HHH-HHHcCCCeEEec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRM-------NIDDGRVVSN-FIA-QAIRGEPLTVQA  236 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~-------~~~~~~~~~~-~~~-~~~~~~~~~~~~  236 (346)
                      +......|+.+|...+.+.+.++.+   .++++..|.||.+-.+..       .......... ... .....-++    
T Consensus       160 ~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl----  235 (272)
T d1g0oa_         160 AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL----  235 (272)
T ss_dssp             SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT----
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC----
Confidence            2223356999999999999988876   479999999998854310       0000000011 111 11111111    


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPG  272 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~  272 (346)
                           ..+...+|+|.+++.++....   .| ++.+.+|.
T Consensus       236 -----gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         236 -----RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             -----CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence                 146788999999999996543   44 57776664

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.73  E-value=1.3e-16  Score=133.86  Aligned_cols=207  Identities=15%  Similarity=0.104  Sum_probs=143.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh---hcCCCCeeEEecccCCc-cc-----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK---WIGHPRFELIRHDVTEP-LL-----------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~d~~~~-~~-----------   95 (346)
                      .+|+||||||++.||.+++++|+++| ..|+++.|.... .+...+   .....++.++.+|++.. ..           
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G-~~vii~~r~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRN-LKNFVILDRVEN-PTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTC-CSEEEEEESSCC-HHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCC-CEEEEEECCccc-HHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999999 988888776543 222222   23344788899999743 21           


Q ss_pred             -CCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHH----c----CCeEEEEecccccCCCCCCCCCCCCcCC
Q 019060           96 -IEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR----V----GARILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        96 -~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~----~~r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                       .++|++||+||...    .++.+..+++|+.++..+.+++..    .    +.++|++||...+.              
T Consensus        82 ~g~iDilvnnAG~~~----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~--------------  143 (254)
T d1sbya1          82 LKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN--------------  143 (254)
T ss_dssp             HSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--------------
T ss_pred             cCCCCEEEeCCCCCC----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhcc--------------
Confidence             26999999998643    567889999999998888776532    2    13799999987752              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                        +......|+.+|.....+.+.++.+   .++++..|.||.|..+...... ..-....+.....+            .
T Consensus       144 --~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------------~  209 (254)
T d1sbya1         144 --AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS------------H  209 (254)
T ss_dssp             --CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT------------S
T ss_pred             --CCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcccc------------C
Confidence              2333457999999999998887765   4799999999998754110000 00000011111111            1


Q ss_pred             ecccHHHHHHHHHHHHhCCCCC-cEEecCC
Q 019060          243 SFCYVSDMVDGLIRLMEGENTG-PINIGNP  271 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~~~-~~~~~~~  271 (346)
                      .....+++|++++.+++....| ++.+.+|
T Consensus       210 ~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         210 PTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             CCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             CCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence            2346789999999888766654 5666665

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.73  E-value=9.7e-17  Score=133.47  Aligned_cols=190  Identities=13%  Similarity=0.068  Sum_probs=137.0

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCe-------EEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC---------
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNE-------VIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~-------V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~---------   96 (346)
                      .||||||++.||++++++|.++| +.       |.+.+|+.....+...+... ...+.++.+|+++.+..         
T Consensus         3 VvlITGas~GIG~aia~~la~~G-~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAA-RHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHT-TTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhC-ccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999 65       77778754222222222222 23577899999997533         


Q ss_pred             ---CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 ---EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                         ++|++||+||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||...+.            
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~------------  149 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATK------------  149 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS------------
T ss_pred             HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcC------------
Confidence               5999999999765433    23567788999999988887765    44444 899999987652            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+.++.+   .++++..+.||.+-.+.....                      .....
T Consensus       150 ----~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~----------------------~~~~~  203 (240)
T d2bd0a1         150 ----AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV----------------------DDEMQ  203 (240)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC----------------------CSTTG
T ss_pred             ----CCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc----------------------CHhhH
Confidence                2222357999999999999988776   368999999999876542110                      01111


Q ss_pred             eecccHHHHHHHHHHHHhCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      ..+...+|+|++++.++.++.
T Consensus       204 ~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         204 ALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCT
T ss_pred             hcCCCHHHHHHHHHHHHcCCc
Confidence            235678999999999998765

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7e-17  Score=135.84  Aligned_cols=203  Identities=15%  Similarity=0.048  Sum_probs=137.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcccC------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|.+|||||++.||.++++.|+++| +.|++.+|+.....+...+..   ....+..+.+|+++++..            
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999999 999999986432222222222   123677899999997543            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcC---CeEEEEecccccCCCCCCCCCCCCcC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG---ARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~---~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      ++|++||+||......    ..++++..++.|+.+...+.+++    ++.+   .++|++||...+..            
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~------------  156 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV------------  156 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC------------
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCC------------
Confidence            6999999999765433    33567788899998888876654    3333   38999999875421            


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                        .|......|+.+|...+.+.+.++.+     .++++..+.||.+-.+................      .       .
T Consensus       157 --~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~------~-------~  221 (257)
T d1xg5a_         157 --LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT------Y-------E  221 (257)
T ss_dssp             --CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH------H-------C
T ss_pred             --CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc------C-------C
Confidence              12223346999999999999988754     36888999998765432100000001111111      0       1


Q ss_pred             eeecccHHHHHHHHHHHHhCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~  262 (346)
                      ...++..+|+|++++.++..+.
T Consensus       222 ~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         222 QMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             ---CBCHHHHHHHHHHHHHSCT
T ss_pred             CCCCcCHHHHHHHHHHHhCChh
Confidence            1246789999999999987664

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4.2e-17  Score=135.78  Aligned_cols=193  Identities=13%  Similarity=0.045  Sum_probs=138.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC------------C
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI------------E   97 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~------------~   97 (346)
                      .++.+|||||++.||++++++|+++| ..|++++|+..+..+...+.. ...++..+.+|+++.+..            +
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G-~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999 999999996432222211111 124688899999997543            5


Q ss_pred             CCEEEEcccCCCcccc----ccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCcCCCC
Q 019060           98 VDQIYHLACPASPIFY----KYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~  168 (346)
                      +|++|||||.......    .+..+..+++|+.+...+.+++    ++.+. ++|++||...+.                
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~----------------  148 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----------------  148 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----------------
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC----------------
Confidence            9999999997654432    2456788999999998887754    44454 899999987642                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHH------hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQ------HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~------~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                      +......|+.+|.+.+.+.+.++.+      .+++++.+.||.+--+...   ..                    .....
T Consensus       149 ~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~---~~--------------------~~~~~  205 (244)
T d1yb1a_         149 SVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK---NP--------------------STSLG  205 (244)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT---CT--------------------HHHHC
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhh---Cc--------------------Ccccc
Confidence            2222356999999999999988765      3688999999887554311   00                    00112


Q ss_pred             ecccHHHHHHHHHHHHhCCCC
Q 019060          243 SFCYVSDMVDGLIRLMEGENT  263 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~~  263 (346)
                      .++..+|+|+.++..+..+..
T Consensus       206 ~~~~pe~va~~i~~~~~~~~~  226 (244)
T d1yb1a_         206 PTLEPEEVVNRLMHGILTEQK  226 (244)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCS
T ss_pred             CCCCHHHHHHHHHHHHhcCCc
Confidence            345679999999988876543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.71  E-value=4.5e-17  Score=138.59  Aligned_cols=213  Identities=14%  Similarity=0.073  Sum_probs=142.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~   98 (346)
                      .+|++|||||++.||++++++|+++| +.|++++|+.....+ +.+.. ..++..+.+|+.+.+..            .+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~G-a~V~i~~r~~~~l~~-~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEG-AKVAVLDKSAERLAE-LETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHH-HHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHH-HHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence            47899999999999999999999999 999999985422221 11111 13688899999987433            69


Q ss_pred             CEEEEcccCCCcccc-----c----cChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcC
Q 019060           99 DQIYHLACPASPIFY-----K----YNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWG  165 (346)
Q Consensus        99 d~vi~~a~~~~~~~~-----~----~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~  165 (346)
                      |++||+||.......     .    .+++..+++|+.++..+.+++    ++.+.++|++||...+-             
T Consensus        81 dilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~-------------  147 (276)
T d1bdba_          81 DTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFY-------------  147 (276)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS-------------
T ss_pred             ccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhcc-------------
Confidence            999999996543211     1    136788999999988887765    44455888888876532             


Q ss_pred             CCCCCCCCCchHHhHHHHHHHHHHHHHHh--CCceEEEEeccccCCCCCCCCccH------HHHHHHHHHcCCCeEEecC
Q 019060          166 NVNPIGVRSCYDEGKRVAETLMFDYHRQH--GIEIRIARIFNTYGPRMNIDDGRV------VSNFIAQAIRGEPLTVQAP  237 (346)
Q Consensus       166 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ivR~~~i~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  237 (346)
                         +......|+.+|...+.+.+.++.+.  ++++..|.||.|-.+.........      -..+.......-++     
T Consensus       148 ---~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-----  219 (276)
T d1bdba_         148 ---PNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-----  219 (276)
T ss_dssp             ---TTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-----
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-----
Confidence               12223569999999999999888764  478999999998655322111100      01111111111111     


Q ss_pred             CcceeecccHHHHHHHHHHHHhC--CC---CCcEEecCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEG--EN---TGPINIGNP  271 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~--~~---~~~~~~~~~  271 (346)
                          ..+..++|+|++++.++..  ..   +..+++.+|
T Consensus       220 ----gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         220 ----GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             ----SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             ----CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence                1355679999999988742  11   456777665

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.71  E-value=2.2e-16  Score=133.16  Aligned_cols=215  Identities=16%  Similarity=0.107  Sum_probs=144.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||++.||.+++++|+++| +.|++..|...+..+...+.+.  ..++..+.+|+++.+..            
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G-~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRG-ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999 9998876644332223222221  23678899999986443            


Q ss_pred             CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEeccc-ccCCCCCCCCCCCCcCCCC
Q 019060           97 EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSE-VYGDPLVHPQDESYWGNVN  168 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~-v~~~~~~~~~~e~~~~~~~  168 (346)
                      ++|++||+||......    ..+.++..+++|+.+...+++++...=   .+++.++|.. .+.                
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~----------------  147 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----------------  147 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----------------
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc----------------
Confidence            5999999999765433    234567888999999988888775431   2566665543 331                


Q ss_pred             CCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCC--------CCC-CCccHHHHHHHHHHcCCCeEEec
Q 019060          169 PIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPR--------MNI-DDGRVVSNFIAQAIRGEPLTVQA  236 (346)
Q Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~  236 (346)
                      +......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+.        ... ........+........++.   
T Consensus       148 ~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~---  224 (259)
T d1ja9a_         148 GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK---  224 (259)
T ss_dssp             SCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS---
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC---
Confidence            11122569999999999999888763   7999999999885321        000 00111122333333333322   


Q ss_pred             CCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCC
Q 019060          237 PGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       237 ~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                            .+...+|+|++++.++....   .| .+.+.+|
T Consensus       225 ------R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         225 ------RIGYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             ------SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence                  36678999999999997543   34 5666655

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.71  E-value=5e-17  Score=138.14  Aligned_cols=219  Identities=13%  Similarity=0.039  Sum_probs=145.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~----------   96 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+...+..    ...++..+.+|+++.+..          
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~G-a~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEG-AQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999 999999986432222222221    123578899999997533          


Q ss_pred             --CCCEEEEcccCCCccc------cccChHHHHHHHHHHHHHHHHHHH----HcCC-eEEEEecccccCCCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIF------YKYNPVKTIKTNVIGTLNMLGLAK----RVGA-RILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~-r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                        ++|++||+||......      ..++++..+++|+.++..+.+++.    +.+. +++++||.....           
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~-----------  150 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-----------  150 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS-----------
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc-----------
Confidence              5999999998643221      123467889999999998877663    3333 677777765432           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHc--CCCeEEecC
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIR--GEPLTVQAP  237 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~  237 (346)
                           +......|+.+|...+.+.+.++.+.   ++++..+.||.+-.+...... ......-......  ...+++   
T Consensus       151 -----~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl---  222 (274)
T d1xhla_         151 -----AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV---  222 (274)
T ss_dssp             -----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT---
T ss_pred             -----cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC---
Confidence                 22223569999999999999887664   799999999998765211100 1111111111111  111211   


Q ss_pred             CcceeecccHHHHHHHHHHHHhCC----C-CCcEEecCCCC
Q 019060          238 GTQTRSFCYVSDMVDGLIRLMEGE----N-TGPINIGNPGE  273 (346)
Q Consensus       238 ~~~~~~~v~v~Dva~~i~~~~~~~----~-~~~~~~~~~~~  273 (346)
                          ..+...+|+|++++.++..+    - +..+.+.+|..
T Consensus       223 ----gR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         223 ----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             ----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             ----CCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence                13567899999999988531    2 45677777643

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.71  E-value=8.2e-17  Score=136.68  Aligned_cols=220  Identities=14%  Similarity=0.052  Sum_probs=144.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccC----------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLI----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~----------   96 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|+.....+...++..    ..++..+.+|+++.+..          
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~G-a~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEG-ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999 9999999864322222222221    23578899999997543          


Q ss_pred             --CCCEEEEcccCCCcccc-----c---cChHHHHHHHHHHHHHHHHHHH----HcCCeEEEEec-ccccCCCCCCCCCC
Q 019060           97 --EVDQIYHLACPASPIFY-----K---YNPVKTIKTNVIGTLNMLGLAK----RVGARILLTST-SEVYGDPLVHPQDE  161 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~~-----~---~~~~~~~~~n~~~~~~l~~~~~----~~~~r~i~~SS-~~v~~~~~~~~~~e  161 (346)
                        ++|++||+||...+...     +   .++...+++|+.++..+.+++.    +.+..+|+++| .+...         
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~---------  153 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ---------  153 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSS---------
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcccc---------
Confidence              69999999997653221     1   2367788999999888887653    33445555555 43321         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCC-c-cHHHHHHHHHH-cCCCeEEe
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDD-G-RVVSNFIAQAI-RGEPLTVQ  235 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~-~-~~~~~~~~~~~-~~~~~~~~  235 (346)
                             +......|+.+|...+.+.+.++.+   +++++..|.||.|-.+...... . ........... ....+++ 
T Consensus       154 -------~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-  225 (272)
T d1xkqa_         154 -------AQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-  225 (272)
T ss_dssp             -------CCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-
T ss_pred             -------CCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-
Confidence                   2222356999999999999988766   3799999999988654211000 0 11111111111 1111211 


Q ss_pred             cCCcceeecccHHHHHHHHHHHHhC---C-C-CCcEEecCCCCC
Q 019060          236 APGTQTRSFCYVSDMVDGLIRLMEG---E-N-TGPINIGNPGEF  274 (346)
Q Consensus       236 ~~~~~~~~~v~v~Dva~~i~~~~~~---~-~-~~~~~~~~~~~~  274 (346)
                            ..+...+|+|++++.++..   . - +.++.+.+|..+
T Consensus       226 ------gR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         226 ------GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             ------SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             ------CCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence                  1366789999999998853   2 2 456777776543

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=2.6e-16  Score=132.07  Aligned_cols=209  Identities=14%  Similarity=0.058  Sum_probs=141.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------------CCCEE
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------------EVDQI  101 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------------~~d~v  101 (346)
                      ++|||||++.||+.++++|.++| +.|.+.+|+.... +.+...    ...+..+|+.+.+..            ++|++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~G-a~V~i~~r~~~~~-~~~~~~----~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAG-HTVACHDESFKQK-DELEAF----AETYPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTT-CEEEECCGGGGSH-HHHHHH----HHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCHHHH-HHHHhh----hCcEEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999 9999998864332 222221    123445676665432            69999


Q ss_pred             EEcccCCCc-cc----cccChHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEecccccCCCCCCCCCCCCcCCCCCCC
Q 019060          102 YHLACPASP-IF----YKYNPVKTIKTNVIGTLNMLGLA----KRVG-ARILLTSTSEVYGDPLVHPQDESYWGNVNPIG  171 (346)
Q Consensus       102 i~~a~~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~  171 (346)
                      |||||.... ..    ..+++...+++|+.+...+.+++    ++.+ .++|++||...+.                +..
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~----------------~~~  139 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG----------------PWK  139 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTS----------------CCT
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccc----------------ccc
Confidence            999986432 21    22456778899999888877754    4444 4999999987653                222


Q ss_pred             CCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCcc----HHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          172 VRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGR----VVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       172 ~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ....|+.+|...+.+.+.++.+.   ++++..|.||.+-.+........    .-+.........-++.         .+
T Consensus       140 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~---------R~  210 (252)
T d1zmta1         140 ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ---------RL  210 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS---------SC
T ss_pred             cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC---------CC
Confidence            23569999999999999887764   79999999999876542211100    0122233322222221         35


Q ss_pred             ccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ...+|+|++++.++....    +..+.+.+|-.
T Consensus       211 g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         211 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            678999999999997654    45677777643

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.69  E-value=3.3e-16  Score=134.51  Aligned_cols=201  Identities=14%  Similarity=-0.001  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-----cchhhhhcC--CCCeeEEecccCCccc--------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-----KDNLRKWIG--HPRFELIRHDVTEPLL--------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-----~~~~~~~~~--~~~~~~~~~d~~~~~~--------   95 (346)
                      .+|++|||||++.||++++++|+++| +.|++.+|.....     ...+.+...  ........+|+.+.+.        
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~G-a~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERG-ALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            57899999999999999999999999 9999998754221     111111110  0123345566666432        


Q ss_pred             ----CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCC
Q 019060           96 ----IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus        96 ----~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                          .++|++|||||......    ..++++..+++|+.++..+.+++    ++.+. ++|++||...+.          
T Consensus        85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~----------  154 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY----------  154 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH----------
T ss_pred             HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC----------
Confidence                26999999999765443    23466789999999999888764    44454 999999987542          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+.   ++++..+.||.+--+..     ..++.                  
T Consensus       155 ------~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~-----~~~~~------------------  205 (302)
T d1gz6a_         155 ------GNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE-----TVMPE------------------  205 (302)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG-----GGSCH------------------
T ss_pred             ------CCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchh-----hcCcH------------------
Confidence                  12223579999999999999888763   78999999987643221     11111                  


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC---CCcEEecCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNP  271 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~  271 (346)
                      ....++..+|+|.+++.++....   ++++.+.+|
T Consensus       206 ~~~~~~~PedvA~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         206 DLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             HHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             hhHhcCCHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence            11223456899999999885432   345555543

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.68  E-value=1e-15  Score=129.15  Aligned_cols=199  Identities=16%  Similarity=0.147  Sum_probs=137.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCCCCCc--chh-hhhc-CCCCeeEEecccCCcccC---------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYFTGSK--DNL-RKWI-GHPRFELIRHDVTEPLLI---------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~~~~~--~~~-~~~~-~~~~~~~~~~d~~~~~~~---------   96 (346)
                      ...+||||||+|.||+.++++|+++| + .|+++.|+.....  ... .++. ....+.++.+|++|....         
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~G-a~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRG-APHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHT-CSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCC-CCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc
Confidence            35699999999999999999999999 6 5777788532211  111 1111 124688899999986322         


Q ss_pred             --CCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHcCC-eEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           97 --EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        97 --~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                        .+|.|||++|........    .+....+++|+.+..++.++++..+. ++|++||....-                +
T Consensus        87 ~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~----------------g  150 (259)
T d2fr1a1          87 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAF----------------G  150 (259)
T ss_dssp             TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHT----------------C
T ss_pred             cccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhcc----------------C
Confidence              599999999976544332    33456778999999999998887765 899999987642                1


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHhCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHH
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSD  249 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  249 (346)
                      ......|+.+|...+.+.+.+... +++++.|.||.+.+++..       ...+...+..          .-...+..++
T Consensus       151 ~~~~~~YaAaka~l~~la~~~~~~-Gi~v~~I~pg~~~~~g~~-------~~~~~~~~~~----------~G~~~~~~~~  212 (259)
T d2fr1a1         151 APGLGGYAPGNAYLDGLAQQRRSD-GLPATAVAWGTWAGSGMA-------EGPVADRFRR----------HGVIEMPPET  212 (259)
T ss_dssp             CTTCTTTHHHHHHHHHHHHHHHHT-TCCCEEEEECCBC-------------------CTT----------TTEECBCHHH
T ss_pred             CcccHHHHHHHHhHHHHHHHHHhC-CCCEEECCCCcccCCccc-------cchHHHHHHh----------cCCCCCCHHH
Confidence            222356999999999998877654 899999999988766421       1111111100          1134578899


Q ss_pred             HHHHHHHHHhCCCCC
Q 019060          250 MVDGLIRLMEGENTG  264 (346)
Q Consensus       250 va~~i~~~~~~~~~~  264 (346)
                      +++++..++......
T Consensus       213 ~~~~l~~~l~~~~~~  227 (259)
T d2fr1a1         213 ACRALQNALDRAEVC  227 (259)
T ss_dssp             HHHHHHHHHHTTCSS
T ss_pred             HHHHHHHHHhCCCce
Confidence            999999999876644

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.5e-16  Score=131.44  Aligned_cols=215  Identities=17%  Similarity=0.134  Sum_probs=140.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE---eCCCCCCcchhhh---hc--CCCCeeEEecccCCccc--------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVV---DNYFTGSKDNLRK---WI--GHPRFELIRHDVTEPLL--------   95 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~---~r~~~~~~~~~~~---~~--~~~~~~~~~~d~~~~~~--------   95 (346)
                      .+.||||||++.||++++++|.++| ..|+.+   .|+. .....+.+   ..  ...++..+.+|+++.+.        
T Consensus         2 kkVvlITGassGIG~a~A~~la~~G-a~v~~v~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDP-SQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCT-TCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCC-CCeEEEEEecCCh-hhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            3457899999999999999999999 665444   3322 11122211   11  23468899999998643        


Q ss_pred             --CCCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCCCCCCCCCCCc
Q 019060           96 --IEVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        96 --~~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                        ..+|+++|+||......    ..++....+++|+.++.++.+++    ++.+. ++|++||....-            
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~------------  147 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM------------  147 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS------------
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC------------
Confidence              25999999999765433    23456778899999988887764    44554 999999987642            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCcc-----------HHHHHHHHHHcCC
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGR-----------VVSNFIAQAIRGE  230 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~-----------~~~~~~~~~~~~~  230 (346)
                          +......|+.+|...+.+.+.++.+.   ++++++|.||.+--+........           ....+.......+
T Consensus       148 ----~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
T d1jtva_         148 ----GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSK  223 (285)
T ss_dssp             ----CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHh
Confidence                22233579999999999999887764   79999999999865432111000           0011111111001


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCCCCcEEecCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNP  271 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~~~~~~~~~~  271 (346)
                      .+.       .......+|+|++++.+++.+....+++.+.
T Consensus       224 ~~~-------~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~  257 (285)
T d1jtva_         224 QVF-------REAAQNPEEVAEVFLTALRAPKPTLRYFTTE  257 (285)
T ss_dssp             HHH-------HHHCBCHHHHHHHHHHHHHCSSCCSEEESCS
T ss_pred             hhh-------cccCCCHHHHHHHHHHHHhCCCCCeEEecHH
Confidence            010       1124568999999999999887777777764

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.67  E-value=6.4e-15  Score=123.26  Aligned_cols=163  Identities=15%  Similarity=0.068  Sum_probs=117.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHh---cCCCeEEEEeCCCCCCcchhhhh-cCCCCeeEEecccCCcccC-----------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRKW-IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ||+||||||++.||++++++|++   +| +.|++..|+.....+ +.+. ....++.++.+|+++.+..           
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPP-QHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCC-SEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHH-HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            46899999999999999999985   57 899999997644332 2222 2245789999999997443           


Q ss_pred             ---CCCEEEEcccCCCccc-c----ccChHHHHHHHHHHHHHHHHHHH----Hc------------CCeEEEEecccccC
Q 019060           97 ---EVDQIYHLACPASPIF-Y----KYNPVKTIKTNVIGTLNMLGLAK----RV------------GARILLTSTSEVYG  152 (346)
Q Consensus        97 ---~~d~vi~~a~~~~~~~-~----~~~~~~~~~~n~~~~~~l~~~~~----~~------------~~r~i~~SS~~v~~  152 (346)
                         ++|++|||||...... .    .++....+++|+.++..+.+++.    +.            +.++|.+||....-
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence               5999999999754322 1    23356788999999988877652    21            23799999975321


Q ss_pred             CCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCC
Q 019060          153 DPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGP  209 (346)
Q Consensus       153 ~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~  209 (346)
                      .  .           .+......|+.||.+...+.+.++.+.   ++++..+.||.+--+
T Consensus       160 ~--~-----------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         160 Q--G-----------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             T--T-----------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             C--C-----------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            0  0           122223469999999999988877653   689999999988654

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.66  E-value=1.1e-15  Score=131.35  Aligned_cols=216  Identities=12%  Similarity=0.032  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC--CCCeeEEecccCCcccC------------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG--HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~------------   96 (346)
                      .+|++|||||+|.||++++++|++.| ++|++++|+.....+...++..  ...+..+.+|+.+.+..            
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~G-a~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLG-AQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            46999999999999999999999999 9999999965333332222221  24577899999987543            


Q ss_pred             CCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHH----HHc-CC-eEEEEecccccCCCCCCCCCCCCcCC
Q 019060           97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLA----KRV-GA-RILLTSTSEVYGDPLVHPQDESYWGN  166 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~----~~~-~~-r~i~~SS~~v~~~~~~~~~~e~~~~~  166 (346)
                      ++|++||+||........    .+....+.+|......+...+    ... .. .++.+||.....              
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--------------  168 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------  168 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--------------
Confidence            699999999976543322    334556677777766665433    222 22 577777765432              


Q ss_pred             CCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceee
Q 019060          167 VNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS  243 (346)
Q Consensus       167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (346)
                        +......|+.+|...+.+.+.++.+.   ++++.+|.||.|-.+....... ............-++         ..
T Consensus       169 --~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~~pl---------~R  236 (294)
T d1w6ua_         169 --GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLD-PTGTFEKEMIGRIPC---------GR  236 (294)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CC-TTSHHHHHHHTTCTT---------SS
T ss_pred             --cccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccC-CcHHHHHHHhhcCCC---------CC
Confidence              11223569999999999999888764   7899999999997664221110 011222222322222         13


Q ss_pred             cccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          244 FCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       244 ~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      +...+|+|++++.++....    +.++.+.+|..
T Consensus       237 ~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~  270 (294)
T d1w6ua_         237 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEE  270 (294)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCCHHHHHHHHHHHhCchhcCCCCcEEEECCChh
Confidence            5678999999999986532    45677777643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.65  E-value=3.5e-15  Score=125.06  Aligned_cols=205  Identities=12%  Similarity=0.030  Sum_probs=134.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC--------------
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI--------------   96 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------------   96 (346)
                      .++||||||++.||.+++++|+++|. +.|++..|+.... +.+.+. ...++.++.+|+++.+..              
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~-~~l~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-TELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-HHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH-HHHHHh-hCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            48999999999999999999999993 3577778764322 222222 234789999999986432              


Q ss_pred             CCCEEEEcccCCCccc-----cccChHHHHHHHHHHHHHHHHHHH----Hc------------CCeEEEEecccccCCCC
Q 019060           97 EVDQIYHLACPASPIF-----YKYNPVKTIKTNVIGTLNMLGLAK----RV------------GARILLTSTSEVYGDPL  155 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~------------~~r~i~~SS~~v~~~~~  155 (346)
                      ++|++|||||......     ..++.++.+++|+.++..+.+++.    +.            ..+++.+|+...+-...
T Consensus        81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            3999999999754321     123466789999999998877653    21            12677777765432111


Q ss_pred             CCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCe
Q 019060          156 VHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       156 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~  232 (346)
                      ...         .+..+...|+.||.+...+.+.++.+   .++++..+.||.|--+.            .     ++  
T Consensus       161 ~~~---------~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m------------~-----~~--  212 (250)
T d1yo6a1         161 TSG---------SAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL------------G-----GK--  212 (250)
T ss_dssp             CST---------TSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------
T ss_pred             ccc---------ccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCC------------C-----CC--
Confidence            000         12233356999999999999988876   37899999998765321            0     00  


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCCC---CCcEEecCCCCCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TGPINIGNPGEFT  275 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~~~~~~~~~~~s  275 (346)
                               ...+..++.++.++..+.+..   .|.|...+++|+.
T Consensus       213 ---------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~  249 (250)
T d1yo6a1         213 ---------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             ---------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             ---------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCC
Confidence                     012356788888888887643   5666665656654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.3e-15  Score=123.85  Aligned_cols=200  Identities=16%  Similarity=0.155  Sum_probs=136.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc------------CCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL------------IEV   98 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~------------~~~   98 (346)
                      .+|.+|||||++.||.+++++|+++| +.|++++|+.....+...++ . ........|+.+...            ...
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQG-ASAVLLDLPNSGGEAQAKKL-G-NNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECTTSSHHHHHHHH-C-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHh-C-CCcccccccccccccccccccccccccccc
Confidence            47899999999999999999999999 99999999765443333332 2 356677777776432            258


Q ss_pred             CEEEEcccCCCccc----------cccChHHHHHHHHHHHHHHHHHHHHc----------CC-eEEEEecccccCCCCCC
Q 019060           99 DQIYHLACPASPIF----------YKYNPVKTIKTNVIGTLNMLGLAKRV----------GA-RILLTSTSEVYGDPLVH  157 (346)
Q Consensus        99 d~vi~~a~~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~-r~i~~SS~~v~~~~~~~  157 (346)
                      |.++++++......          ..+.....+++|+.++..+.+++...          +. ++|++||...+.     
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~-----  155 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE-----  155 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhcc-----
Confidence            88888876433211          12356678899999999998877432          22 799999988652     


Q ss_pred             CCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEE
Q 019060          158 PQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTV  234 (346)
Q Consensus       158 ~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
                                 +......|+.+|...+.+.+.++.+.   ++++..+.||.+..+...    .+...........-++  
T Consensus       156 -----------~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~----~~~~~~~~~~~~~~pl--  218 (248)
T d2o23a1         156 -----------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT----SLPEKVCNFLASQVPF--  218 (248)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSS--
T ss_pred             -----------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhh----cCCHHHHHHHHhcCCC--
Confidence                       22333579999999999999988774   689999999998765421    1111122222211111  


Q ss_pred             ecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          235 QAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       235 ~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                            ...+...+|+|++++.+++..
T Consensus       219 ------~~R~g~peevA~~v~fL~s~~  239 (248)
T d2o23a1         219 ------PSRLGDPAEYAHLVQAIIENP  239 (248)
T ss_dssp             ------SCSCBCHHHHHHHHHHHHHCT
T ss_pred             ------CCCCcCHHHHHHHHHHHHhCC
Confidence                  013567899999999988743

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.64  E-value=1.8e-15  Score=125.68  Aligned_cols=184  Identities=16%  Similarity=0.081  Sum_probs=127.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcc--------------cCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPL--------------LIE   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------------~~~   97 (346)
                      +|+||||||+|.||++++++|+++| +.|.++++......         .....+.++..+..              ..+
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G-~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARN-WWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEeCCccccc---------cccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999 99999988543211         11122233332211              124


Q ss_pred             CCEEEEcccCCCcc-c----cccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPI-F----YKYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~-~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++||+||..... .    ..++.+..+++|+.+...+.+++...   +.++|++||...+.                +
T Consensus        72 iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------------~  135 (236)
T d1dhra_          72 VDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------------G  135 (236)
T ss_dssp             EEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------C
T ss_pred             ceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC----------------C
Confidence            89999999854321 1    12445677899999998888877543   23899999987653                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHH-----hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQ-----HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ......|+.+|...+.+.+.++.+     .++++..+.||.+..|.            .+......         ..-.+
T Consensus       136 ~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~------------~~~~~~~~---------~~~~~  194 (236)
T d1dhra_         136 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM------------NRKSMPEA---------DFSSW  194 (236)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH------------HHHHSTTS---------CGGGS
T ss_pred             ccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc------------chhhCccc---------hhhcC
Confidence            223357999999999999998765     36899999998887541            11111111         11246


Q ss_pred             ccHHHHHHHHHHHHhCCC
Q 019060          245 CYVSDMVDGLIRLMEGEN  262 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~~~  262 (346)
                      +..+++|+.++.++....
T Consensus       195 ~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         195 TPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             EEHHHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHHhCCCc
Confidence            788999999999887543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=1.2e-14  Score=122.54  Aligned_cols=214  Identities=14%  Similarity=0.025  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCccc------------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLL------------   95 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~------------   95 (346)
                      .+|++|||||+|  .||+++++.|+++| ++|++.+|+.. ..+...+... ......+..|+.+...            
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G-~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREG-AELAFTYQNDK-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTT-CEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcC-CEEEEEeCCHH-HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            479999999999  79999999999999 99999998642 2323222222 2345667777776432            


Q ss_pred             CCCCEEEEcccCCCccccc---------cChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEecccccCCCCCCCCCCCC
Q 019060           96 IEVDQIYHLACPASPIFYK---------YNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTSTSEVYGDPLVHPQDESY  163 (346)
Q Consensus        96 ~~~d~vi~~a~~~~~~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS~~v~~~~~~~~~~e~~  163 (346)
                      ..+|++||+++........         +........|..+...+.+++...-   ..+|++||.....           
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~-----------  150 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------  150 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhcc-----------
Confidence            2589999999875433221         1234455677777777777765532   2588888876531           


Q ss_pred             cCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcc
Q 019060          164 WGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQ  240 (346)
Q Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (346)
                           +......|+.+|.+.+.+.+.++.+.   ++++..++||.|..+......  ............-++        
T Consensus       151 -----~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~~~pl--------  215 (258)
T d1qsga_         151 -----AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--DFRKMLAHCEAVTPI--------  215 (258)
T ss_dssp             -----BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT--------
T ss_pred             -----CCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccc--hhhhHHHHHHhCCCC--------
Confidence                 22223569999999999999988775   689999999999876532211  112222222221111        


Q ss_pred             eeecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          241 TRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       241 ~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                       ..+...+|+|++++.++....    +.++.+.+|-.
T Consensus       216 -~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         216 -RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             -SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             -CCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHH
Confidence             135678999999999986542    44577776643

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.62  E-value=4.2e-15  Score=123.34  Aligned_cols=182  Identities=18%  Similarity=0.159  Sum_probs=124.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc--------------ccCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP--------------LLIE   97 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------~~~~   97 (346)
                      ..|||||||+|.||++++++|+++| ++|++++|+......         ....+.+|..+.              ...+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G-~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNG-YTVLNIDLSANDQAD---------SNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTT-EEEEEEESSCCTTSS---------EEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCchhccc---------ccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            3589999999999999999999999 999999996532111         112233333322              1235


Q ss_pred             CCEEEEcccCCCccc-c----ccChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCCCCCCCCCCCCcCCCCC
Q 019060           98 VDQIYHLACPASPIF-Y----KYNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGDPLVHPQDESYWGNVNP  169 (346)
Q Consensus        98 ~d~vi~~a~~~~~~~-~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~  169 (346)
                      +|++|||||...... .    .+..+..+++|+.++..+.+++...   +.++|++||...+.                +
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~----------------~  135 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------P  135 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------C
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC----------------C
Confidence            899999999643221 1    1345567899999988888776543   23899999987653                2


Q ss_pred             CCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeec
Q 019060          170 IGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSF  244 (346)
Q Consensus       170 ~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (346)
                      ......|+.+|.+.+.+.+.++.+.     ++++..+.|+.+-.+            +.+......         ....+
T Consensus       136 ~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~------------~~~~~~~~~---------~~~~~  194 (235)
T d1ooea_         136 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP------------MNRKWMPNA---------DHSSW  194 (235)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH------------HHHHHSTTC---------CGGGC
T ss_pred             cccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc------------chhhhCcCC---------ccccC
Confidence            2234679999999999999987653     557778888776532            222222111         12357


Q ss_pred             ccHHHHHHHHHHHHhC
Q 019060          245 CYVSDMVDGLIRLMEG  260 (346)
Q Consensus       245 v~v~Dva~~i~~~~~~  260 (346)
                      +..+|+++.++.++..
T Consensus       195 ~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         195 TPLSFISEHLLKWTTE  210 (235)
T ss_dssp             BCHHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHhcC
Confidence            7899999998866644

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=9.7e-15  Score=123.58  Aligned_cols=198  Identities=12%  Similarity=0.089  Sum_probs=135.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh--cCCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW--IGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      -.+|++||||||+.||++++++|+++| +.|++++|+.....+...+.  ........+.+|..+....           
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G-~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            357999999999999999999999999 99999999643222222221  1223567788888775322           


Q ss_pred             -CCCEEEEcccCCCccc----cccChHHHHHHHHHHHHHHHHHH----HHcCCeEEEEecccccCCCCCCCCCCCCcCCC
Q 019060           97 -EVDQIYHLACPASPIF----YKYNPVKTIKTNVIGTLNMLGLA----KRVGARILLTSTSEVYGDPLVHPQDESYWGNV  167 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~r~i~~SS~~v~~~~~~~~~~e~~~~~~  167 (346)
                       .+|+++++||......    ..++....+++|+.++..+.+++    ++.+.++|++||...+-               
T Consensus        91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~---------------  155 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKV---------------  155 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTS---------------
T ss_pred             CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcC---------------
Confidence             5999999998765433    22345677889988888776655    34445899999987542               


Q ss_pred             CCCCCCCchHHhHHHHHHHHHHHHHHh-----CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCccee
Q 019060          168 NPIGVRSCYDEGKRVAETLMFDYHRQH-----GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTR  242 (346)
Q Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (346)
                       +......|+.||...+.+.+.++.+.     ++++..+.||.|-.+            +......+         ....
T Consensus       156 -~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~------------~~~~~~~~---------~~~~  213 (269)
T d1xu9a_         156 -AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE------------TAMKAVSG---------IVHM  213 (269)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH------------HHHHHSCG---------GGGG
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc------------HHHHhccC---------Cccc
Confidence             22233679999999999999887653     477888999877532            12221111         1122


Q ss_pred             ecccHHHHHHHHHHHHhCCCCCc
Q 019060          243 SFCYVSDMVDGLIRLMEGENTGP  265 (346)
Q Consensus       243 ~~v~v~Dva~~i~~~~~~~~~~~  265 (346)
                      .....+++|+.++..+......+
T Consensus       214 ~~~~~e~~a~~i~~~~~~~~~~i  236 (269)
T d1xu9a_         214 QAAPKEECALEIIKGGALRQEEV  236 (269)
T ss_dssp             GCBCHHHHHHHHHHHHHTTCSEE
T ss_pred             cCCCHHHHHHHHHHHhhcCCCEE
Confidence            34567899999888776555444

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=5.6e-16  Score=130.67  Aligned_cols=205  Identities=9%  Similarity=0.002  Sum_probs=135.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHh---cCCCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCccc---------
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLME---NEKNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLL---------   95 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~---~g~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~---------   95 (346)
                      .+|.++||||++.||++++++|.+   +| +.|++++|+.....+...++   ....++.++.+|+++.+.         
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G-~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPG-SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTT-CEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCC-CEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            367889999999999999999986   68 99999998643222221111   123367889999998632         


Q ss_pred             -------CCCCEEEEcccCCCccc-------cccChHHHHHHHHHHHHHHHHHHHH----cC---CeEEEEecccccCCC
Q 019060           96 -------IEVDQIYHLACPASPIF-------YKYNPVKTIKTNVIGTLNMLGLAKR----VG---ARILLTSTSEVYGDP  154 (346)
Q Consensus        96 -------~~~d~vi~~a~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~---~r~i~~SS~~v~~~~  154 (346)
                             ..+|++||+||...+..       ..+++...+++|+.++..+.+++..    .+   .++|++||...+.  
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~--  161 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--  161 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS--
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC--
Confidence                   14789999998653211       1234667899999999999887743    22   2799999987642  


Q ss_pred             CCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH-hCCceEEEEeccccCCCCCCCC-ccHHHHHHHHHHcCCCe
Q 019060          155 LVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ-HGIEIRIARIFNTYGPRMNIDD-GRVVSNFIAQAIRGEPL  232 (346)
Q Consensus       155 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~~~~~ivR~~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~  232 (346)
                                    +......|+.+|...+.+.+.++.+ .++++..+.||.+..+...... ...-+.....+....  
T Consensus       162 --------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--  225 (259)
T d1oaaa_         162 --------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK--  225 (259)
T ss_dssp             --------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH--
T ss_pred             --------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC--
Confidence                          2233467999999999999988766 4688999999888754210000 000001111110000  


Q ss_pred             EEecCCcceeecccHHHHHHHHHHHHhCC
Q 019060          233 TVQAPGTQTRSFCYVSDMVDGLIRLMEGE  261 (346)
Q Consensus       233 ~~~~~~~~~~~~v~v~Dva~~i~~~~~~~  261 (346)
                             ....+...+|+|++++.+++..
T Consensus       226 -------~~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         226 -------SDGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             -------HTTCSBCHHHHHHHHHHHHHHC
T ss_pred             -------CCCCCCCHHHHHHHHHHHhhhc
Confidence                   0113467899999999988754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2e-14  Score=122.08  Aligned_cols=177  Identities=18%  Similarity=0.084  Sum_probs=120.0

Q ss_pred             CCEE-EEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccC------------
Q 019060           32 NMRI-LVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLI------------   96 (346)
Q Consensus        32 ~~~i-lItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~------------   96 (346)
                      +|+| |||||++.||.+++++|++. | +.|++.+|+.....+...++.. ..++.++.+|+.+.++.            
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            5676 89999999999999999986 7 8999999965433333222221 34688999999997543            


Q ss_pred             CCCEEEEcccCCCccccc----cChHHHHHHHHHHHHHHHHHHHHc---CCeEEEEecccccCC-CCCCC----------
Q 019060           97 EVDQIYHLACPASPIFYK----YNPVKTIKTNVIGTLNMLGLAKRV---GARILLTSTSEVYGD-PLVHP----------  158 (346)
Q Consensus        97 ~~d~vi~~a~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~---~~r~i~~SS~~v~~~-~~~~~----------  158 (346)
                      ++|++|||||...+....    ++....+++|+.++..+.+++...   ..|+|++||...... ....+          
T Consensus        81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccc
Confidence            599999999976543322    345667899999999999887542   238999999754210 00000          


Q ss_pred             CCCC--------------CcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh-------CCceEEEEeccccCC
Q 019060          159 QDES--------------YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH-------GIEIRIARIFNTYGP  209 (346)
Q Consensus       159 ~~e~--------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~~~~~ivR~~~i~G~  209 (346)
                      ..+.              ......+..+...|+.+|.....+.+.++.+.       ++.+..+.||.|--+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~  232 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  232 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCC
Confidence            0000              00000122344679999999988877655442       788999999988654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.55  E-value=7.6e-14  Score=116.15  Aligned_cols=201  Identities=17%  Similarity=0.131  Sum_probs=133.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----------CCCCEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----------IEVDQI  101 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~d~v  101 (346)
                      |++|||||++.||++++++|+++| +.|++.+|+...           .+...+++|+.+...           ...+.+
T Consensus         2 K~alITGas~GIG~aiA~~la~~G-a~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~   69 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARG-YRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV   69 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHT-CEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccccccch
Confidence            789999999999999999999999 999999986421           234566777766422           134555


Q ss_pred             EEcccCCCcc--------ccccChHHHHHHHHHHHHHHHHHHHHc----------C-CeEEEEecccccCCCCCCCCCCC
Q 019060          102 YHLACPASPI--------FYKYNPVKTIKTNVIGTLNMLGLAKRV----------G-ARILLTSTSEVYGDPLVHPQDES  162 (346)
Q Consensus       102 i~~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~-~r~i~~SS~~v~~~~~~~~~~e~  162 (346)
                      +++++.....        ......+..++.|+.+...+...+...          + .++|++||...+-          
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~----------  139 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE----------  139 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH----------
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhcc----------
Confidence            5555432211        112344567788888888777655322          2 2799999987642          


Q ss_pred             CcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCc
Q 019060          163 YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGT  239 (346)
Q Consensus       163 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
                            +......|+.+|...+.+.+.++.+   +++++..|.||.+..+....    .............++.      
T Consensus       140 ------~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~~~~~~~~~------  203 (241)
T d1uaya_         140 ------GQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG----LPEKAKASLAAQVPFP------  203 (241)
T ss_dssp             ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT----SCHHHHHHHHTTCCSS------
T ss_pred             ------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccch----hhhhHHHHHHhcCCCC------
Confidence                  2223357999999999999998876   47899999999987553211    1122222222222210      


Q ss_pred             ceeecccHHHHHHHHHHHHhCCC--CCcEEecCCCC
Q 019060          240 QTRSFCYVSDMVDGLIRLMEGEN--TGPINIGNPGE  273 (346)
Q Consensus       240 ~~~~~v~v~Dva~~i~~~~~~~~--~~~~~~~~~~~  273 (346)
                        ..+...+|+|++++.+++..-  +.++.+.+|-.
T Consensus       204 --~R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         204 --PRLGRPEEYAALVLHILENPMLNGEVVRLDGALR  237 (241)
T ss_dssp             --CSCCCHHHHHHHHHHHHHCTTCCSCEEEESTTCC
T ss_pred             --CCCcCHHHHHHHHHHHHhCCCCCCCEEEECCccc
Confidence              135578999999999888543  45677766643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.53  E-value=3.4e-13  Score=114.38  Aligned_cols=214  Identities=10%  Similarity=-0.038  Sum_probs=132.6

Q ss_pred             CCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-CCCCeeEEecccCCcccC-----------
Q 019060           31 SNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-GHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        31 ~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      .+|++|||||+|  .||.+++++|+++| ++|++++|+.. ..+...+.. ......+..+|+++....           
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~G-a~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQG-ATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTT-CEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCC-CEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            479999999887  79999999999999 99999999742 222222221 123566788888876332           


Q ss_pred             -CCCEEEEcccCCCccccc-----cChHHHHHHH---HHHHHHHHHHHHHcCC---eEEEEecccccCCCCCCCCCCCCc
Q 019060           97 -EVDQIYHLACPASPIFYK-----YNPVKTIKTN---VIGTLNMLGLAKRVGA---RILLTSTSEVYGDPLVHPQDESYW  164 (346)
Q Consensus        97 -~~d~vi~~a~~~~~~~~~-----~~~~~~~~~n---~~~~~~l~~~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~  164 (346)
                       .+|++||+++........     .........+   ......+.....+...   .++.+|+.....            
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~------------  149 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------------  149 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS------------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccc------------
Confidence             599999999975432211     1222222222   2233333333333222   355555555442            


Q ss_pred             CCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcce
Q 019060          165 GNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQT  241 (346)
Q Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
                          +......|+.+|...+.+.+..+.+.   ++++.++.||.+.-+........  ...........++         
T Consensus       150 ----~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~---------  214 (274)
T d2pd4a1         150 ----YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF--RMILKWNEINAPL---------  214 (274)
T ss_dssp             ----BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH--HHHHHHHHHHSTT---------
T ss_pred             ----ccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch--HHHHHHHhhhhhc---------
Confidence                22233569999999999998877664   68999999998876643211111  1122211111111         


Q ss_pred             eecccHHHHHHHHHHHHhCCC----CCcEEecCCCC
Q 019060          242 RSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGE  273 (346)
Q Consensus       242 ~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~  273 (346)
                      ..+...+|+|.+++.++....    +.++.+.+|..
T Consensus       215 ~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         215 RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChh
Confidence            245678999999999987543    44677777653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.51  E-value=4.4e-13  Score=114.29  Aligned_cols=211  Identities=15%  Similarity=0.053  Sum_probs=133.3

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecc-----------------cCCc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHD-----------------VTEP   93 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d-----------------~~~~   93 (346)
                      .+|||||++.||++++++|+++| +.|++.+|+.....+.+.+.+   .......+++|                 +++.
T Consensus         4 VAlITGas~GIG~aiA~~la~~G-a~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEG-YAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcC-CEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            57999999999999999999999 999988775433222222211   12234444444                 4432


Q ss_pred             cc------------CCCCEEEEcccCCCcccccc----C--------------hHHHHHHHHHHHHHHHHHHHHc-----
Q 019060           94 LL------------IEVDQIYHLACPASPIFYKY----N--------------PVKTIKTNVIGTLNMLGLAKRV-----  138 (346)
Q Consensus        94 ~~------------~~~d~vi~~a~~~~~~~~~~----~--------------~~~~~~~n~~~~~~l~~~~~~~-----  138 (346)
                      +.            .++|++||+||...+....+    +              ....+.+|+.+...+.+++.+.     
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            21            25999999999765432211    1              1235677888888777765321     


Q ss_pred             ----C-C-eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCC
Q 019060          139 ----G-A-RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGP  209 (346)
Q Consensus       139 ----~-~-r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~  209 (346)
                          + . ++|.++|.....                +......|+.+|...+.+.+.++.+.   ++++..+.||.+-..
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~----------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~  226 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV  226 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred             HHhcCCCCcccccccccccC----------------CccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence                1 2 577777765431                22334679999999999999888764   789999999863221


Q ss_pred             CCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCCCCC
Q 019060          210 RMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPGEFT  275 (346)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~~~s  275 (346)
                            ........+.....-++.        ..+...+|+|++++.++....    +..+.+.+|..++
T Consensus       227 ------~~~~~~~~~~~~~~~pl~--------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         227 ------DDMPPAVWEGHRSKVPLY--------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             ------GGSCHHHHHHHHTTCTTT--------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ------ccCCHHHHHHHHhcCCCC--------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence                  111233444433332210        135678999999999986543    4467777776543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.50  E-value=1.9e-13  Score=115.63  Aligned_cols=218  Identities=12%  Similarity=0.046  Sum_probs=134.0

Q ss_pred             CCCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-----------
Q 019060           30 QSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-----------   96 (346)
Q Consensus        30 ~~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-----------   96 (346)
                      ..+|++|||||+|  .||.+++++|.++| .+|++..|+..+..+.+.+... .+...+++|+.+....           
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~G-a~Vil~~~~~~~~~~~~~~~~~-~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQG-AQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTT-CEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcC-CEEEEEeCChHHHHHHHHHHcC-CceeeEeeecccccccccccchhhhcc
Confidence            3579999999654  69999999999999 9999998865333233333322 3577889999986321           


Q ss_pred             ----CCCEEEEcccCCCcccc------c---cChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEecccccCCCCCCCCCC
Q 019060           97 ----EVDQIYHLACPASPIFY------K---YNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLVHPQDE  161 (346)
Q Consensus        97 ----~~d~vi~~a~~~~~~~~------~---~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS~~v~~~~~~~~~~e  161 (346)
                          .+|+++|+++.......      +   ......+..|..........+.....  ..++++|.....         
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~---------  152 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR---------  152 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS---------
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccc---------
Confidence                48999999986542211      1   22334455555566655555554432  344554443321         


Q ss_pred             CCcCCCCCCCCCCchHHhHHHHHHHHHHHHHHh---CCceEEEEeccccCCCCC----CCCc----cHHHHHHHHHHcCC
Q 019060          162 SYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQH---GIEIRIARIFNTYGPRMN----IDDG----RVVSNFIAQAIRGE  230 (346)
Q Consensus       162 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ivR~~~i~G~~~~----~~~~----~~~~~~~~~~~~~~  230 (346)
                             .......|+.+|...+.+.+.++.+.   ++++..|.||.+-.+...    ....    .....+.......-
T Consensus       153 -------~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
T d2h7ma1         153 -------AMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA  225 (268)
T ss_dssp             -------CCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC
T ss_pred             -------cCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC
Confidence                   11223579999999999999887663   689999999987543100    0001    11111222222111


Q ss_pred             CeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCCC
Q 019060          231 PLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (346)
Q Consensus       231 ~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~~  273 (346)
                      ++.        +.+..++|+|++++.++....   .| ++.+.+|..
T Consensus       226 pl~--------rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         226 PIG--------WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             TTC--------CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             CCC--------CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence            111        235567999999999996543   34 577776653

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.49  E-value=1.6e-12  Score=109.59  Aligned_cols=209  Identities=16%  Similarity=0.118  Sum_probs=130.4

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc---CCCCeeEEecccCCcc----------------
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI---GHPRFELIRHDVTEPL----------------   94 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~----------------   94 (346)
                      ..|||||++.||++++++|+++| ++|++++|+..+..+.+.+.+   .......+..|..+..                
T Consensus         3 vAlVTGas~GIG~aia~~la~~G-~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQG-FRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            57999999999999999999999 999999986533322222211   1234556666554421                


Q ss_pred             cCCCCEEEEcccCCCccccc---------------cChHHHHHHHHHHHHHHHHHHHHc---------CC-eEEEEeccc
Q 019060           95 LIEVDQIYHLACPASPIFYK---------------YNPVKTIKTNVIGTLNMLGLAKRV---------GA-RILLTSTSE  149 (346)
Q Consensus        95 ~~~~d~vi~~a~~~~~~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~---------~~-r~i~~SS~~  149 (346)
                      ..++|++||+||...+....               ......+..|+.............         .. .++.+|+..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            12599999999976533211               112233444544444444433321         11 466666655


Q ss_pred             ccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHH
Q 019060          150 VYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQA  226 (346)
Q Consensus       150 v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~  226 (346)
                      ...                +......|+.+|...+.+.+.++.+   .++++..+.||.+.-+...   .   .......
T Consensus       162 ~~~----------------~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~---~---~~~~~~~  219 (266)
T d1mxha_         162 TDL----------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM---P---QETQEEY  219 (266)
T ss_dssp             GGS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS---C---HHHHHHH
T ss_pred             ccc----------------cCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC---C---HHHHHHH
Confidence            432                2223467999999999999988776   4789999999998765422   1   2233333


Q ss_pred             HcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC---CC-cEEecCCCC
Q 019060          227 IRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN---TG-PINIGNPGE  273 (346)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~---~~-~~~~~~~~~  273 (346)
                      ...-++   +     +-+...+|+|++++.++....   .| .+.+.+|-.
T Consensus       220 ~~~~pl---~-----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         220 RRKVPL---G-----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             HTTCTT---T-----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             HhcCCC---C-----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence            322221   0     124578999999999997543   44 677777654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.48  E-value=1.5e-12  Score=111.71  Aligned_cols=219  Identities=10%  Similarity=0.002  Sum_probs=135.4

Q ss_pred             hccCCCCEEEEEcCch--hHHHHHHHHHHhcCCCeEEEEeCCCCCCcc---------hhhhhc---CCC---CeeEEecc
Q 019060           27 KFFQSNMRILVTGGAG--FIGSHLVDKLMENEKNEVIVVDNYFTGSKD---------NLRKWI---GHP---RFELIRHD   89 (346)
Q Consensus        27 ~~~~~~~~ilItG~tG--~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---------~~~~~~---~~~---~~~~~~~d   89 (346)
                      ++...+|++|||||+|  .||+.++++|+++| .+|++.+|+......         ......   ...   .+..+..+
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~G-a~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAG-AEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCC-CEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            3445689999999987  89999999999999 999988874210000         000000   000   11112222


Q ss_pred             cCCc------------------------------ccCCCCEEEEcccCCCcc---c---cccChHHHHHHHHHHHHHHHH
Q 019060           90 VTEP------------------------------LLIEVDQIYHLACPASPI---F---YKYNPVKTIKTNVIGTLNMLG  133 (346)
Q Consensus        90 ~~~~------------------------------~~~~~d~vi~~a~~~~~~---~---~~~~~~~~~~~n~~~~~~l~~  133 (346)
                      +.+.                              ...++|++||+||.....   .   ..+++...+++|+.+...+.+
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence            2111                              012599999999864321   1   234567788999999999998


Q ss_pred             HHHHcCC---eEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHH----HhCCceEEEEeccc
Q 019060          134 LAKRVGA---RILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHR----QHGIEIRIARIFNT  206 (346)
Q Consensus       134 ~~~~~~~---r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~~~~~ivR~~~i  206 (346)
                      ++...-.   +.+.+++......               .......|+.+|...+.+.+.++.    .+++++..+.||.+
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~---------------~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i  226 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERI---------------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPL  226 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HHHHHhhcCCcceeeeehhhccc---------------ccccccceecccccccccccccchhccccceEEecccccccc
Confidence            8765432   4556665543321               112235699999999887765543    35899999999999


Q ss_pred             cCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHHHHHHHHHhCCC----CCcEEecCCC
Q 019060          207 YGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMVDGLIRLMEGEN----TGPINIGNPG  272 (346)
Q Consensus       207 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~i~~~~~~~~----~~~~~~~~~~  272 (346)
                      ..+....  ......+.+.....-++.         .+...+|+|.+++.++....    +.++.+.+|.
T Consensus       227 ~T~~~~~--~~~~~~~~~~~~~~~Plg---------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         227 GSRAAKA--IGFIDTMIEYSYNNAPIQ---------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             BCCCSSC--CSHHHHHHHHHHHHSSSC---------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cchhhhh--ccCCHHHHHHHHhCCCCC---------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            8775432  122334444433332221         35678999999999986432    4466776653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.37  E-value=1.5e-11  Score=106.73  Aligned_cols=160  Identities=9%  Similarity=-0.012  Sum_probs=104.6

Q ss_pred             CCEEEEEc--CchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchh--------hhhcC-----CCCeeEEecc-------
Q 019060           32 NMRILVTG--GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL--------RKWIG-----HPRFELIRHD-------   89 (346)
Q Consensus        32 ~~~ilItG--~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~--------~~~~~-----~~~~~~~~~d-------   89 (346)
                      ++..||||  ++..||+.+++.|.++| .+|.+..+.........        .....     ........+|       
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~G-A~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRN-VKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTT-CEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcC-CEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            47899999  56799999999999999 99988876431100000        00000     0111222222       


Q ss_pred             -------------cCCccc------------CCCCEEEEcccCCCcc------ccccChHHHHHHHHHHHHHHHHHHHHc
Q 019060           90 -------------VTEPLL------------IEVDQIYHLACPASPI------FYKYNPVKTIKTNVIGTLNMLGLAKRV  138 (346)
Q Consensus        90 -------------~~~~~~------------~~~d~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~  138 (346)
                                   +.+...            -++|++||+||...+.      ...+++...+++|+.+...+.+++...
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                         222211            2699999999865421      123456778899999888888877654


Q ss_pred             ---CCeEEEEecccccCCCCCCCCCCCCcCCCCCCCCCCchHHhHHHHHHHHHHHHHH----hCCceEEEEecccc
Q 019060          139 ---GARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQ----HGIEIRIARIFNTY  207 (346)
Q Consensus       139 ---~~r~i~~SS~~v~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ivR~~~i~  207 (346)
                         +.++|.+||......               -+.....|+.+|...+.+.+.++.+    +++++..|.||.|-
T Consensus       161 m~~~GsIv~iss~~~~~~---------------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~  221 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKV---------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEEECGGGTSC---------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             cccccccccceeehhccc---------------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence               237999988765321               1111246999999999998877643    58999999999774

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.35  E-value=4e-13  Score=112.83  Aligned_cols=223  Identities=13%  Similarity=0.034  Sum_probs=118.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      ||.||||||++.||++++++|+++| ++|++++|+..+....+...   ...+....|........+|+++++|+...  
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~G-a~V~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~id~lv~~Ag~~~--   74 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAG-HQIVGIDIRDAEVIADLSTA---EGRKQAIADVLAKCSKGMDGLVLCAGLGP--   74 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSSSSEECCTTSH---HHHHHHHHHHHTTCTTCCSEEEECCCCCT--
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCC-CEEEEEECChHHHHHHhcCH---HHHHHHHHHHHHHhCCCCcEEEEcCCCCC--
Confidence            4578999999999999999999999 99999998643222111110   01111112222222335899999998643  


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHH----HHcCC-eEEEEecccccCCC-CCCCCCCC----------C-cCCCCCCCCCC
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLA----KRVGA-RILLTSTSEVYGDP-LVHPQDES----------Y-WGNVNPIGVRS  174 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~-r~i~~SS~~v~~~~-~~~~~~e~----------~-~~~~~~~~~~~  174 (346)
                       ...........|..+...+.+..    .+... ....+++....... ...+....          . ...........
T Consensus        75 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~  153 (257)
T d1fjha_          75 -QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL  153 (257)
T ss_dssp             -TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchH
Confidence             23444555667777666665543    22232 45555544322100 00000000          0 00000111123


Q ss_pred             chHHhHHHHHHHHHHHHHH---hCCceEEEEeccccCCCCCCCCccHHHHHHHHHHcCCCeEEecCCcceeecccHHHHH
Q 019060          175 CYDEGKRVAETLMFDYHRQ---HGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRSFCYVSDMV  251 (346)
Q Consensus       175 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ivR~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva  251 (346)
                      .|+.+|...+.+.+.++.+   .++++..+.||.+-.+........  .......... ..       ....+...+|+|
T Consensus       154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~-~~-------PlgR~g~p~eva  223 (257)
T d1fjha_         154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAKF-VP-------PMGRRAEPSEMA  223 (257)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------C-CC-------STTSCCCTHHHH
T ss_pred             HHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--HHHHHHHHhc-CC-------CCCCCcCHHHHH
Confidence            5999999999999987755   479999999999876542110000  0011111100 00       112366789999


Q ss_pred             HHHHHHHhCCC---CC-cEEecCC
Q 019060          252 DGLIRLMEGEN---TG-PINIGNP  271 (346)
Q Consensus       252 ~~i~~~~~~~~---~~-~~~~~~~  271 (346)
                      ++++.++....   .| .+.+.+|
T Consensus       224 ~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         224 SVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHhCchhCCccCceEEeCCC
Confidence            99999986543   44 5666665

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.93  E-value=3.8e-11  Score=95.62  Aligned_cols=78  Identities=9%  Similarity=0.125  Sum_probs=59.0

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCccc-----CCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLL-----IEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~d~vi~~  104 (346)
                      -.+|+|+||||+|.||+.+++.|+++| .+|++++|+..+..+..........+....+|+.+...     .++|+|||+
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~   99 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEG-AEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA   99 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhc-cchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence            357999999999999999999999999 99999999754333332332223355677788877533     379999999


Q ss_pred             ccCC
Q 019060          105 ACPA  108 (346)
Q Consensus       105 a~~~  108 (346)
                      ||..
T Consensus       100 Ag~g  103 (191)
T d1luaa1         100 GAIG  103 (191)
T ss_dssp             CCTT
T ss_pred             Cccc
Confidence            9854

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.26  E-value=3e-06  Score=63.09  Aligned_cols=113  Identities=12%  Similarity=0.133  Sum_probs=71.8

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhh----cCCCCeeEEecccCCcccCCCCEEEE
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW----IGHPRFELIRHDVTEPLLIEVDQIYH  103 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~d~~~~~~~~~d~vi~  103 (346)
                      ++.+|||.|+|+ |++|..++..|+.+|. .+++++++...........+    ...........|..+  ..++|+||.
T Consensus         2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~--~~~adivvi   78 (146)
T d1ez4a1           2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSD--CKDADLVVI   78 (146)
T ss_dssp             BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGG--GTTCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHH--hccccEEEE
Confidence            455789999995 9999999999999884 58999997542211111111    111233445666543  457999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ++|...  ....+....+..|..-...+++.+.+.+.  -+|.+|
T Consensus        79 tag~~~--~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          79 TAGAPQ--KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             CCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             eccccc--CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence            997543  23345566778899999999999988875  344443

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.26  E-value=2e-06  Score=63.93  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=57.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC---CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-cccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK---NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~d~vi~~a~~  107 (346)
                      |++|.|+||||++|+.+++.|+++..   .+++.+.++.......  .+. .....  ..++.+ ....++|++|.+++ 
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~--~~~-~~~~~--~~~~~~~~~~~~~DivF~a~~-   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP--SFG-GTTGT--LQDAFDLEALKALDIIVTCQG-   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC--GGG-TCCCB--CEETTCHHHHHTCSEEEECSC-
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc--ccc-CCcee--eecccchhhhhcCcEEEEecC-
Confidence            45899999999999999999988752   3556555433221111  111 11111  111222 23457999998872 


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                                       ......+...+.+.|.+.+.++..+.|-
T Consensus        75 -----------------~~~s~~~~~~~~~~g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          75 -----------------GDYTNEIYPKLRESGWQGYWIDAASSLR  102 (146)
T ss_dssp             -----------------HHHHHHHHHHHHHTTCCCEEEECSSTTT
T ss_pred             -----------------chHHHHhhHHHHhcCCCeecccCCcccc
Confidence                             1124456666777787766666665553

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.23  E-value=1.3e-05  Score=59.46  Aligned_cols=111  Identities=12%  Similarity=0.094  Sum_probs=73.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCC-cch----hhhh--cCCCCeeEE-ecccCCcccCCCCEEEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGS-KDN----LRKW--IGHPRFELI-RHDVTEPLLIEVDQIYH  103 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~-~~~----~~~~--~~~~~~~~~-~~d~~~~~~~~~d~vi~  103 (346)
                      |||.|+||+|.+|+.++-.|..++. .++.++++..... .+.    +...  ......+.. .++-......+.|+||-
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            7999999999999999999999884 5888888753211 111    1110  111223332 22212234557999999


Q ss_pred             cccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC-eEEEE
Q 019060          104 LACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLT  145 (346)
Q Consensus       104 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-r~i~~  145 (346)
                      +||..  .....+....+..|..-.+.+++...+.+- .++.+
T Consensus        81 tAG~~--~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV  121 (145)
T d1hyea1          81 TSGVP--RKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI  121 (145)
T ss_dssp             CCSCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             ecccc--cCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence            99853  234456778889999999999999888764 44433

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.21  E-value=2.9e-06  Score=62.31  Aligned_cols=67  Identities=22%  Similarity=0.291  Sum_probs=51.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      |+|+|+|+ |.+|+.+++.|.+.| ++|++++++.    +...+.....+...+.+|.+++..+      +.|.++-+.
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g-~~v~vid~d~----~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t   73 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKG-HDIVLIDIDK----DICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT   73 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESCH----HHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCC-CCcceecCCh----hhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccC
Confidence            89999996 999999999999999 9999998743    3333322223678899999987543      588888654

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.15  E-value=6.1e-06  Score=63.90  Aligned_cols=101  Identities=12%  Similarity=0.153  Sum_probs=60.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe-CCCCC-Ccchhh---h-hcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD-NYFTG-SKDNLR---K-WIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~-r~~~~-~~~~~~---~-~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ||||.|.|||||+|+.|++.|..+...++..+. ++... ......   . +.......+...+..+....++|++|.+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al   80 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT   80 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence            579999999999999999999998645665553 32211 111111   1 11122333333333333345789999876


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                      ..                  .....+...+.+.++++|=.|+.+=
T Consensus        81 p~------------------~~s~~~~~~~~~~~~~vIDlSadfR  107 (179)
T d2g17a1          81 AH------------------EVSHDLAPQFLQAGCVVFDLSGAFR  107 (179)
T ss_dssp             CH------------------HHHHHHHHHHHHTTCEEEECSSTTS
T ss_pred             cc------------------hhHHHHhhhhhhcCceeeccccccc
Confidence            21                  1233455566667788988887753

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=2e-05  Score=58.41  Aligned_cols=112  Identities=16%  Similarity=0.051  Sum_probs=72.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHh-cCC-CeEEEEeCCCCCCcchhhhhcCC---CCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLME-NEK-NEVIVVDNYFTGSKDNLRKWIGH---PRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~-~g~-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+|++|.+|++++-.|.. .+. .++..++... ........+...   .....+..+-...+..+.|+||.+||.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence            7999999999999999988754 342 6888888642 222211122111   112222221112234579999999985


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ..  ....+....+..|..-.+.+.+.+.+.+.  .+|.+|.
T Consensus        80 ~~--k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          80 RR--KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             cC--CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccC
Confidence            42  33456667789999999999999988864  4666654

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.06  E-value=4.9e-05  Score=56.13  Aligned_cols=110  Identities=14%  Similarity=0.038  Sum_probs=73.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      |||.|+|+ |.+|++++..|+..+. .++.+++++.............     ....++...+. ..+..+.|+|+-+||
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag   78 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence            79999996 9999999999999885 5899998765322221111111     12333332221 234567999999997


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ...  ....+....+..|..-...+++.+.+.+.  .++.+|
T Consensus        79 ~~~--~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          79 LPR--KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             CCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             cCC--CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEec
Confidence            532  33445667788999999999998888764  455444

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.05  E-value=8.8e-06  Score=60.31  Aligned_cols=110  Identities=15%  Similarity=0.045  Sum_probs=73.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCC---Cee-EEecccCCcccCCCCEEEEcccCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHP---RFE-LIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~---~~~-~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ||.|+||+|.+|++++-.|..++. .+++.++....  ...........   ... .+..+-......+.|+||.+||..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~--~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~   79 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEecccc--chhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence            799999999999999999998885 57888886431  11111221111   111 122211112345799999999853


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      .  ....+....+..|....+.+++.+.+.+.  .++.+|.
T Consensus        80 ~--~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          80 R--KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             C--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             C--CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence            2  33456677889999999999999999875  5665554

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.04  E-value=9.2e-06  Score=60.29  Aligned_cols=94  Identities=17%  Similarity=0.170  Sum_probs=57.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcC--CCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENE--KNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g--~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      |+|.|.||||++|+.|++.|.+++  ..++..+..+... .....    ...-++...++......++|++|.+++.   
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~-Gk~i~----~~~~~~~~~~~~~~~~~~~d~vf~a~p~---   74 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA-GQRMG----FAESSLRVGDVDSFDFSSVGLAFFAAAA---   74 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT-TCEEE----ETTEEEECEEGGGCCGGGCSEEEECSCH---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC-Cccee----eccccchhccchhhhhccceEEEecCCc---
Confidence            799999999999999999997654  2466655432211 11111    1112333334444455679999877621   


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSE  149 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~  149 (346)
                                     .....+...+.+.+.++|=.||.+
T Consensus        75 ---------------~~s~~~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          75 ---------------EVSRAHAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             ---------------HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred             ---------------chhhhhccccccCCceEEeechhh
Confidence                           123445556667777888777764

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.01  E-value=2e-05  Score=59.06  Aligned_cols=118  Identities=13%  Similarity=0.036  Sum_probs=74.5

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc-----CCCCeeEEecccCCcccCCCCEEE
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIY  102 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~d~vi  102 (346)
                      ++...+||.|+|+ |.+|+.++..|...+..++++++.+..........+.     ..........+..+.+..+.|+|+
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVv   81 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI   81 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEE
Confidence            3455789999997 9999999998888885588888865432221111111     111122222222223345799999


Q ss_pred             EcccCCCccc---cccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          103 HLACPASPIF---YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       103 ~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      .++|......   ...+....+..|..-...+++.+.+.+.  -++.+|
T Consensus        82 itag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs  130 (154)
T d1pzga1          82 VTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT  130 (154)
T ss_dssp             ECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             EecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            9998543211   1235566778899999999999988875  455444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.93  E-value=5.2e-05  Score=55.81  Aligned_cols=109  Identities=15%  Similarity=0.097  Sum_probs=73.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      |||.|+|+ |.+|..++-.|+.++. .++..++++..........+.    -.........|.  .+..+.|+|+-+||.
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~--~~~~~adivvitag~   77 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY--ADLKGSDVVIVAAGV   77 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG--GGGTTCSEEEECCCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH--HHhcCCCEEEEeccc
Confidence            79999996 9999999999998885 578888875322111111110    112334444443  345679999999976


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ..  .........+..|..-...+++...+.+.  .++.+|
T Consensus        78 ~~--~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          78 PQ--KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             CC--CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             cc--CCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeC
Confidence            43  33455667788899999999999988875  455444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.92  E-value=0.00011  Score=54.16  Aligned_cols=109  Identities=17%  Similarity=0.157  Sum_probs=71.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcC----CCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIG----HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +||.|+|+ |.+|..++-.|+.++. .++.++++...........+..    ........+|.  .+..+.|+|+.+||.
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~~~adivvitag~   78 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY--SDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG--GGGTTCSEEEECCCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH--HHhCCCceEEEeccc
Confidence            58999996 9999999999999985 4899999865433333222221    12233333332  345679999999975


Q ss_pred             CCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          108 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ..  ....+....+..|..-...+++.+.+.+.  .+|.+|
T Consensus        79 ~~--~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          79 NR--KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             --------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred             cc--CcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence            42  33456778889999999999999998765  455444

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.91  E-value=4.8e-05  Score=56.06  Aligned_cols=109  Identities=17%  Similarity=0.070  Sum_probs=73.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc-----CCCCeeEE-ecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELI-RHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~-~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+|+ |.+|.+++-.|..++. .++.+++++..........+.     .....+.. ..|.  .+..+.|+||-+|
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~--~~~~~adiVvita   77 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY--SLLKGSEIIVVTA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG--GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH--HHhccccEEEEec
Confidence            79999996 9999999999998885 578888875322111111110     11122333 2343  3566799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      |...  ....+....+..|..-...+.+.+.+.+.  .++.+|
T Consensus        78 g~~~--~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          78 GLAR--KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             CCCC--CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             cccC--CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence            7532  34456778889999999999999988764  455444

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.91  E-value=5.9e-05  Score=56.07  Aligned_cols=110  Identities=15%  Similarity=0.218  Sum_probs=74.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhh-----cCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW-----IGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      ..||.|+|+ |++|.+++..|+..+. .++..+++...........+     +..........|.  .+..+.|+||.++
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~--~~l~daDvvvita   82 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY--DDCRDADLVVICA   82 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG--GGTTTCSEEEECC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH--HHhccceeEEEec
Confidence            569999996 9999999999999884 47999987532211111111     1122344445554  3355799999999


Q ss_pred             cCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          106 CPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      |...  ....+....+..|..-.+.+++.+.+.+.  .+|.+|
T Consensus        83 g~~~--~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          83 GANQ--KPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             SCCC--CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             cccc--ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            7543  33445566778899999999998888764  566554

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.88  E-value=6.3e-06  Score=61.08  Aligned_cols=94  Identities=16%  Similarity=0.212  Sum_probs=52.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-cccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-PLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~d~vi~~a~~~  108 (346)
                      |||.|+|||||+|+.|++.|+++..|   ++..+..+...  .....+..  ....+. +..+ ....++|+||.+... 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~--gk~~~~~~--~~~~~~-~~~~~~~~~~~DvvF~alp~-   74 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNFGK--DAGMLH-DAFDIESLKQLDAVITCQGG-   74 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS--SBCCCSSS--CCCBCE-ETTCHHHHTTCSEEEECSCH-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccc--ccccccCC--cceeee-cccchhhhccccEEEEecCc-
Confidence            79999999999999999999875423   44444432211  11111111  111111 1122 223579999987621 


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCe--EEEEeccc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSE  149 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r--~i~~SS~~  149 (346)
                                       .-...+...+.+.+.+  +|=.||.+
T Consensus        75 -----------------~~s~~~~~~l~~~g~~~~VIDlSsdf  100 (147)
T d1mb4a1          75 -----------------SYTEKVYPALRQAGWKGYWIDAASTL  100 (147)
T ss_dssp             -----------------HHHHHHHHHHHHTTCCSEEEESSSTT
T ss_pred             -----------------hHHHHHhHHHHHcCCceEEEeCCccc
Confidence                             1244566677777765  55445543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.85  E-value=0.00011  Score=53.94  Aligned_cols=109  Identities=14%  Similarity=0.005  Sum_probs=74.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCc--chhhhh----cCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSK--DNLRKW----IGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~--~~~~~~----~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ||.|+||+|.+|+.++-.|..++. .++.+++.......  .....+    .-.........|..  +..+.|+||.+||
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~--~~~~aDiVvitaG   79 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE--DTAGSDVVVITAG   79 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG--GGTTCSEEEECCC
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH--HhhhcCEEEEecc
Confidence            799999999999999999999985 47888875321111  111111    11233444444443  3457999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ..  .....+....+..|..-.+.+++...+.+-  .++.+|
T Consensus        80 ~~--~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          80 IP--RQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             CC--CCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC
T ss_pred             cc--cccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence            53  234457788899999999999999998864  455554

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.79  E-value=8e-05  Score=55.84  Aligned_cols=112  Identities=14%  Similarity=0.089  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhh-----cCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKW-----IGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      +++||.|+|+ |.+|+.++-.|..+|. .++.+++++..........+     +.......-..|.  .+..+.|+||.+
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~--~~~~~adiVVit   95 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY--SVTANSKIVVVT   95 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG--GGGTTCSEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch--hhcccccEEEEe
Confidence            3579999996 9999999999999995 47888887532221111111     1111222223333  345579999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ||...  ....+....+..|..-.+.++....+.+.  -+|.+|-
T Consensus        96 Ag~~~--~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          96 AGVRQ--QEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             CSCCC--CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             cCCcc--ccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            98643  33455667778899999999999888775  4665553

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=1.9e-05  Score=60.13  Aligned_cols=34  Identities=26%  Similarity=0.248  Sum_probs=31.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      |||+|+|+ |.+|+.++..|.+.| |+|++++|...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G-~~V~~~~r~~~   34 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQG-HEVQGWLRVPQ   34 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSSCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCC-CceEEEEcCHH
Confidence            89999996 999999999999999 99999999653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.73  E-value=1.5e-05  Score=62.55  Aligned_cols=34  Identities=29%  Similarity=0.444  Sum_probs=32.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |||.|+||+|.+|+.|++.|.++| |+|++.+|+.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G-~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLG-HEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTT-CEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            899999999999999999999999 9999999964

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.72  E-value=0.00019  Score=52.76  Aligned_cols=109  Identities=15%  Similarity=0.119  Sum_probs=72.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ||.|+|+ |.+|.+++-.|..++. .++.+++++..........+.    ..........+.. .+..+.|+||.+||..
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~-~~~~daDvVVitaG~~   80 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGPR   80 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCCC
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH-HHhhCCcEEEEecccc
Confidence            7999996 9999999999999985 488888875422211111111    0122333333222 2355799999999854


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      .  ....+....+..|..-.+.++..+.+.+-  -++.+|
T Consensus        81 ~--~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          81 Q--KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             C--CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             c--CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            2  34466678889999999999999988875  455444

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.66  E-value=0.00012  Score=56.19  Aligned_cols=34  Identities=24%  Similarity=0.385  Sum_probs=31.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|+|+|+|| |++|+++++.|.++| |+|++.+|+.
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g-~~V~v~dr~~   35 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSG-IKVTVACRTL   35 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTT-CEEEEEESCH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCC-CEEEEEECCh
Confidence            589999986 999999999999999 9999999965

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.65  E-value=0.00024  Score=54.18  Aligned_cols=111  Identities=17%  Similarity=0.116  Sum_probs=71.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC----C--eEEEEeCCCCCCcchhh----hh--cCCCCee-EEecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK----N--EVIVVDNYFTGSKDNLR----KW--IGHPRFE-LIRHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~----~--~V~~~~r~~~~~~~~~~----~~--~~~~~~~-~~~~d~~~~~~~~~d   99 (346)
                      -||.|+||+|.||++++-.|.....    .  .+..++...  ....+.    .+  ...+... .+..+-....+.+.|
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~--~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD  102 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER--SFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD  102 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG--GHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc--ccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence            3799999999999999999886431    2  344444422  111111    11  1112222 222332333456899


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEec
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST  147 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS  147 (346)
                      +||-++|..  .....+....+..|..-.+.+.+++.+..   ++++.+|-
T Consensus       103 vVvi~ag~~--rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1         103 WALLIGAKP--RGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             EEEECCCCC--CCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             eEEEeeccC--CCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence            999999753  35567778899999999999999998853   36666653

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=0.00011  Score=49.88  Aligned_cols=89  Identities=19%  Similarity=0.167  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      .+++|+|+|. |-.|.++++.|.+.| ++|++.+.+......   ..+. ....+...........++|.||..-|... 
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g-~~v~~~D~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~d~vi~SPGi~~-   76 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARG-VTPRVMDTRMTPPGL---DKLP-EAVERHTGSLNDEWLMAADLIVASPGIAL-   76 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTT-CCCEEEESSSSCTTG---GGSC-TTSCEEESBCCHHHHHHCSEEEECTTSCT-
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCC-CEEEEeeCCcCchhH---HHHh-hccceeecccchhhhccCCEEEECCCCCC-
Confidence            3689999995 888999999999999 999999875432211   1121 24444444443333446899998655421 


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                          .             ..+++.|++.++++|
T Consensus        77 ----~-------------~~~~~~a~~~gi~ii   92 (93)
T d2jfga1          77 ----A-------------HPSLSAAADAGIEIV   92 (93)
T ss_dssp             ----T-------------SHHHHHHHHTTCEEE
T ss_pred             ----C-------------CHHHHHHHHcCCCeE
Confidence                1             146777788777765

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.61  E-value=0.00021  Score=52.55  Aligned_cols=109  Identities=16%  Similarity=0.132  Sum_probs=67.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-----CCCeeEE-ecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELI-RHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~-~~d~~~~~~~~~d~vi~~a~  106 (346)
                      +||.|+|+ |.+|..++-.|...+..++..++............+..     ....... ..|..  +..+.|+||-+||
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~--~~~~advvvitag   78 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA--DTANSDVIVVTSG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG--GGTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH--HhcCCCEEEEeee
Confidence            69999995 99999999999888855888888754322222222111     1122333 23333  3457999999998


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ...  ....+....+..|..-...++....+.+.  .++.+|
T Consensus        79 ~~~--~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          79 APR--KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             CC-----------CHHHHHHHHHHHHHHHGGGCTTCEEEECS
T ss_pred             ccC--CcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeC
Confidence            543  22344556678899999999999988764  455443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.60  E-value=8.5e-05  Score=55.65  Aligned_cols=111  Identities=15%  Similarity=0.129  Sum_probs=69.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCC---e-E--EEEeCCCCCCcchhhh------hcCCCCeeEEecc-cCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKN---E-V--IVVDNYFTGSKDNLRK------WIGHPRFELIRHD-VTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~---~-V--~~~~r~~~~~~~~~~~------~~~~~~~~~~~~d-~~~~~~~~~d   99 (346)
                      |||.|+||+|++|++++-.|...+..   + +  ..+.-.  ...+....      .........+... -......+.|
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad   82 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP--QAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD   82 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG--GGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccc--cchhhHcCchhhhhccccccccccccCCchhhhccccc
Confidence            69999999999999999999886521   1 1  222211  11111111      1111223332222 2233456899


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcC---CeEEEEec
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG---ARILLTST  147 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~r~i~~SS  147 (346)
                      +||.++|...  ....+....+..|..-.+.+...+.+..   +.++.+|-
T Consensus        83 vViitaG~~~--~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          83 YALLVGAAPR--KAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             EEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             EEEeecCcCC--CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence            9999998642  4456777888999999999999988853   25655553

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.59  E-value=0.0002  Score=54.16  Aligned_cols=65  Identities=25%  Similarity=0.323  Sum_probs=42.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+| .|.+|+.+++.|.+.| |+|++++|+..    ...+......+.....++.  ...++|+||.+.
T Consensus         1 MkI~iIG-~G~mG~~lA~~l~~~g-~~V~~~d~~~~----~~~~a~~~~~~~~~~~~~~--~~~~~DiIilav   65 (165)
T d2f1ka2           1 MKIGVVG-LGLIGASLAGDLRRRG-HYLIGVSRQQS----TCEKAVERQLVDEAGQDLS--LLQTAKIIFLCT   65 (165)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCHH----HHHHHHHTTSCSEEESCGG--GGTTCSEEEECS
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCC-CEEEEEECCch----HHHHHHHhhccceeeeecc--cccccccccccC
Confidence            7999997 6999999999999999 99999998532    2222222111222222221  234689998654

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.59  E-value=0.00052  Score=48.20  Aligned_cols=88  Identities=14%  Similarity=0.094  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      .+++|||+| .|-+|..-++.|++.| ..|+++...   ..+....+....++++......+....+++.|+.+.+  . 
T Consensus        11 ~~k~vlVvG-~G~va~~ka~~ll~~g-a~v~v~~~~---~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~--d-   82 (113)
T d1pjqa1          11 RDRDCLIVG-GGDVAERKARLLLEAG-ARLTVNALT---FIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATD--D-   82 (113)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTT-BEEEEEESS---CCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCS--C-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CeEEEEecc---CChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCC--C-
Confidence            478999999 7889999999999999 899988753   3344555556678889888888877778898886541  1 


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCC
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGA  140 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  140 (346)
                            .    +    ....+.+.|++.++
T Consensus        83 ------~----~----~n~~i~~~a~~~~i   98 (113)
T d1pjqa1          83 ------D----T----VNQRVSDAAESRRI   98 (113)
T ss_dssp             ------H----H----HHHHHHHHHHHTTC
T ss_pred             ------H----H----HHHHHHHHHHHcCC
Confidence                  1    1    12357778888774

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.59  E-value=0.00041  Score=51.33  Aligned_cols=113  Identities=14%  Similarity=0.124  Sum_probs=72.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-----CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-----HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ++||.|+|+ |.+|+.++..|..++..++.++++...........+..     .........+ ...+..+.|+|+.++|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~-~~~~~~~advvvitag   80 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN-TYDDLAGADVVIVTAG   80 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC-CGGGGTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc-cccccCCCcEEEEecc
Confidence            569999995 99999999888877756888888754322222111111     1122222222 1234457999999998


Q ss_pred             CCCccc---cccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIF---YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ......   ...+....+..|..-.+.+++.+.+.+.  .++.+|
T Consensus        81 ~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          81 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             cccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            543211   1224556778999999999999988875  455444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.58  E-value=0.00017  Score=51.86  Aligned_cols=73  Identities=21%  Similarity=0.278  Sum_probs=52.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPI  111 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~  111 (346)
                      |||.|.|++|-+|+.|++.+.+.+ +++.+- +++.                        .....++|+||....+    
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~-~~l~~~id~~~------------------------~~~~~~~DVvIDFS~p----   51 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKG-HELVLKVDVNG------------------------VEELDSPDVVIDFSSP----   51 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTT-CEEEEEEETTE------------------------EEECSCCSEEEECSCG----
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCC-CeEEEEECCCc------------------------HHHhccCCEEEEecCH----
Confidence            799999999999999999998888 877643 3210                        0112358999987632    


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                    ..+...++.|.+.++.+|.=+|.
T Consensus        52 --------------~~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          52 --------------EALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             --------------GGHHHHHHHHHHHTCEEEECCCS
T ss_pred             --------------HHHHHHHHHHHhcCCCEEEEcCC
Confidence                          14667888999999887644443

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.56  E-value=0.00023  Score=53.11  Aligned_cols=93  Identities=15%  Similarity=0.185  Sum_probs=53.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCC---eEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKN---EVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      ||.|+|||||+|+.|++.|.++. +   ++..+..+.  ...  +. .....-.....+..+....+.|.++.+++.   
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~-fp~~~l~~~~s~~--s~G--~~-~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~---   73 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEEST-LPIDKIRYLASAR--SAG--KS-LKFKDQDITIEETTETAFEGVDIALFSAGS---   73 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCC-SCEEEEEEEECGG--GTT--CE-EEETTEEEEEEECCTTTTTTCSEEEECSCH---
T ss_pred             EEEEECCCcHHHHHHHHHHHcCC-CCceEEEEecccc--ccc--cc-ccccCCcccccccchhhhhhhhhhhhccCc---
Confidence            79999999999999999888875 3   333333211  110  00 000111223334444555678888877631   


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccc
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEV  150 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v  150 (346)
                                     .....+...+.+.++++|=.|+..=
T Consensus        74 ---------------~~s~~~~~~~~~~~~~VIDlSsdfR   98 (154)
T d2gz1a1          74 ---------------STSAKYAPYAVKAGVVVVDNTSYFR   98 (154)
T ss_dssp             ---------------HHHHHHHHHHHHTTCEEEECSSTTT
T ss_pred             ---------------cchhhHHhhhccccceehhcChhhh
Confidence                           1233445555666778887777654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=9.2e-05  Score=55.49  Aligned_cols=112  Identities=13%  Similarity=0.070  Sum_probs=71.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc-----CCCCeeEEecccCCcccCCCCEEEEc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      ...||.|+|+ |.+|..++-.|...+. .++.+++++..........+.     ..........|.  .+..+.|+||.+
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~--~~~~~adivvit   94 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY--NVSANSKLVIIT   94 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG--GGGTTEEEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch--hhhccccEEEEe
Confidence            3468999995 9999999999999985 478898875322211111111     111222223343  234579999999


Q ss_pred             ccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEec
Q 019060          105 ACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTST  147 (346)
Q Consensus       105 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~SS  147 (346)
                      ||...  ....+....++.|..-...++..+.+.+-  .++.+|-
T Consensus        95 ag~~~--~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          95 AGARM--VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             CSCCC--CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ccccc--CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence            97543  22344445568899989999888887764  4555553

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.49  E-value=5.3e-05  Score=56.71  Aligned_cols=39  Identities=18%  Similarity=0.279  Sum_probs=34.9

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +++..++|.|+||.|.+|+.+++.|.+.| |+|.+++|..
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G-~~V~~~d~~~   43 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASG-YPISILDRED   43 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTT-CCEEEECTTC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcC-CCcEeccccc
Confidence            34456899999999999999999999999 9999999854

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=0.00016  Score=54.35  Aligned_cols=98  Identities=16%  Similarity=0.320  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEE-EEeCCCCCC-cchhhhhcCC--CCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVI-VVDNYFTGS-KDNLRKWIGH--PRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~-~~~r~~~~~-~~~~~~~~~~--~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      +.+||+|.|++|-+|+.+++.+.+....++. +++|..... .....+....  .++. +.-|+ +.....+|+||...-
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~-~~~~~-~~~~~~~DViIDFs~   80 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVT-VQSSL-DAVKDDFDVFIDFTR   80 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCC-EESCS-TTTTTSCSEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCce-eeccH-HHHhcccceEEEecc
Confidence            4689999999999999999999987645654 445533211 1111111111  1111 22222 233446999998751


Q ss_pred             CCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          107 PASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                        -..+...++.|.+.++.+|.=+|.
T Consensus        81 ------------------p~~~~~~~~~a~~~~~~~ViGTTG  104 (162)
T d1diha1          81 ------------------PEGTLNHLAFCRQHGKGMVIGTTG  104 (162)
T ss_dssp             ------------------HHHHHHHHHHHHHTTCEEEECCCC
T ss_pred             ------------------HHHHHHHHHHHHhccceeEEecCC
Confidence                              124567888999999888754443

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.47  E-value=0.00037  Score=52.93  Aligned_cols=69  Identities=13%  Similarity=0.160  Sum_probs=46.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |++|+|+| .|.+|.++++.|.+.|. .+|++++|+.    +..........+.....+.......++|.||.+.
T Consensus         1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~----~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~   70 (171)
T d2g5ca2           1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINP----ESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSS   70 (171)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCH----HHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECS
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECCh----HHHHHHHHhhcchhhhhhhhhhhccccccccccC
Confidence            35799998 79999999999999983 4788888743    2222222222334444454454555789999765

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.45  E-value=0.00024  Score=51.69  Aligned_cols=66  Identities=18%  Similarity=0.262  Sum_probs=49.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      |+++|+| .|-+|+.+++.|.+.| ++|++++.+    ++...+. .......+.+|.+++..+      ++|.||-+.
T Consensus         1 k~~iIiG-~G~~G~~la~~L~~~g-~~vvvid~d----~~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           1 KQFAVIG-LGRFGGSIVKELHRMG-HEVLAVDIN----EEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTT-CCCEEEESC----HHHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CeEEEecCc----HHHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEc
Confidence            4688897 5999999999999999 999999863    3333333 334667888998887543      588887654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.42  E-value=0.00024  Score=52.38  Aligned_cols=111  Identities=13%  Similarity=0.089  Sum_probs=68.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCCCCCcchhhhhc-----CCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYFTGSKDNLRKWI-----GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      +||.|+|+ |.+|..++-.|+.+|. .++..++++..........+.     ..........|..  +..+.|+||-+||
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~--~l~~adiVVitaG   78 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA--ALADADVVISTLG   78 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG--GGTTCSEEEECCS
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH--HhccccEEEEecc
Confidence            69999995 9999999999999884 588888875422111111111     1112333344433  3567999999997


Q ss_pred             CCCccc--cccChHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          107 PASPIF--YKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       107 ~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ......  ...+....++.|..-...+.+.+.+.+.  -+|.+|
T Consensus        79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             CGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEec
Confidence            532111  1122234567899999999999888764  455444

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.42  E-value=5.6e-05  Score=57.73  Aligned_cols=33  Identities=21%  Similarity=0.415  Sum_probs=27.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      ||||.|.||||++|+.|++.|.++...++..+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~   33 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLS   33 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEee
Confidence            579999999999999999999988745666554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.34  E-value=0.00028  Score=52.67  Aligned_cols=110  Identities=16%  Similarity=0.132  Sum_probs=66.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC----C--eEEEEeCCCCCCcchhhhh------cCCCCeeEE-ecccCCcccCCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK----N--EVIVVDNYFTGSKDNLRKW------IGHPRFELI-RHDVTEPLLIEVD   99 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~----~--~V~~~~r~~~~~~~~~~~~------~~~~~~~~~-~~d~~~~~~~~~d   99 (346)
                      |||.|+||+|.+|++++-.|...+.    .  ++..++...  ........      ........+ ..+-......+.|
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   81 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP--MMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD   81 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG--GHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc--chhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence            6999999999999999999876542    1  234444322  11111111      111222222 2222233456799


Q ss_pred             EEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHc-CC--eEEEEe
Q 019060          100 QIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRV-GA--RILLTS  146 (346)
Q Consensus       100 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~--r~i~~S  146 (346)
                      +||-++|...  ....+....+..|..-.+.+.....+. +.  .+|.+|
T Consensus        82 vVVitag~~~--~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          82 VAILVGSMPR--RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             EEEECCSCCC--CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             EEEEecccCC--CCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence            9999997543  333445566788999999998888664 43  455555

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.29  E-value=0.00019  Score=55.37  Aligned_cols=34  Identities=26%  Similarity=0.522  Sum_probs=28.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      .++||.|.|||||+|+.|++.|.++...++..+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~   37 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT   37 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence            3579999999999999999999988645666554

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.24  E-value=0.00026  Score=54.07  Aligned_cols=74  Identities=20%  Similarity=0.095  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC----cccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE----PLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~d~vi~~a~  106 (346)
                      .+.+|||+||+|.+|...++.+...| .+|++++++..+ .+...+. ....+.....+..+    ....++|+||.+.|
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~G-a~Viat~~s~~k-~~~~~~l-Ga~~vi~~~~~~~~~~~~~~~~gvD~vid~vg  107 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRG-YTVEASTGKAAE-HDYLRVL-GAKEVLAREDVMAERIRPLDKQRWAAAVDPVG  107 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCTTC-HHHHHHT-TCSEEEECC---------CCSCCEEEEEECST
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcC-CceEEecCchHH-HHHHHhc-ccceeeecchhHHHHHHHhhccCcCEEEEcCC
Confidence            36789999999999999999999999 999998876432 2333332 22111111111111    12236999999886


Q ss_pred             C
Q 019060          107 P  107 (346)
Q Consensus       107 ~  107 (346)
                      .
T Consensus       108 g  108 (176)
T d1xa0a2         108 G  108 (176)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.12  E-value=0.00018  Score=54.05  Aligned_cols=74  Identities=19%  Similarity=0.285  Sum_probs=48.2

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      ..+++|||+|+ |-+|+.+++.|...|...+++..|+..+. ..+...+   +...+..+-......++|+||.+.+..
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka-~~l~~~~---~~~~~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA-VELARDL---GGEAVRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHHH---TCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHH-HHHHHhh---hcccccchhHHHHhccCCEEEEecCCC
Confidence            35789999996 99999999999999945799999864222 2222222   223332222222334799999987643

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.00024  Score=45.91  Aligned_cols=36  Identities=31%  Similarity=0.349  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|||+||+|.+|...++.+...| .+|++++++.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G-~~Vi~~t~s~   66 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLG-YQVVAVSGRE   66 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcC-CeEEEEECCH
Confidence            46799999999999999999999999 8999988754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.02  E-value=0.0019  Score=46.58  Aligned_cols=75  Identities=15%  Similarity=0.186  Sum_probs=51.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEE-EeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCccc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIV-VDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIF  112 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~~~  112 (346)
                      ||.|.|++|-+|+.+++.+.+...+++.. +++..+                     +......++|+||.+..+.    
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~---------------------~~~~~~~~~DvvIDFS~p~----   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP---------------------LSLLTDGNTEVVIDFTHPD----   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC---------------------THHHHTTTCSEEEECCCTT----
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc---------------------hhhhccccCCEEEEcccHH----
Confidence            79999999999999999988876567654 333210                     0111123589999876332    


Q ss_pred             cccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEec
Q 019060          113 YKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST  147 (346)
Q Consensus       113 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS  147 (346)
                                    .+...++.|.+.++.+|.=+|
T Consensus        56 --------------~~~~~~~~~~~~~~~~ViGTT   76 (135)
T d1yl7a1          56 --------------VVMGNLEFLIDNGIHAVVGTT   76 (135)
T ss_dssp             --------------THHHHHHHHHHTTCEEEECCC
T ss_pred             --------------HHHHHHHHHHhcCCCEEEecc
Confidence                          356788889999988764333

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=96.97  E-value=0.00089  Score=51.35  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|||+||+|.+|...++.....| .+|++++++.
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~G-a~vi~~~~~~   64 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKG-CKVVGAAGSD   64 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTT-CEEEEEESSH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccC-CEEEEeCCCH
Confidence            357899999999999999999999999 8999998743

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.90  E-value=0.00027  Score=53.81  Aligned_cols=70  Identities=16%  Similarity=0.102  Sum_probs=46.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCC-----cccCCCCEEEEc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTE-----PLLIEVDQIYHL  104 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~d~vi~~  104 (346)
                      ..+.+|||+||+|-+|...++.+...| .+|++++++.. +.+..++. .   .+.+ .|..+     ....++|+||.+
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G-~~vi~~~~~~~-~~~~~~~l-G---a~~~-i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMG-LRVLAAASRPE-KLALPLAL-G---AEEA-ATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTT-CEEEEEESSGG-GSHHHHHT-T---CSEE-EEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccc-ccccccccccc-cccccccc-c---ccee-eehhhhhhhhhccccccccccc
Confidence            457899999999999999999999999 89998887542 22222222 2   2111 02222     123469999997


Q ss_pred             cc
Q 019060          105 AC  106 (346)
Q Consensus       105 a~  106 (346)
                      .|
T Consensus        99 ~G  100 (171)
T d1iz0a2          99 RG  100 (171)
T ss_dssp             SC
T ss_pred             cc
Confidence            64

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.00088  Score=50.76  Aligned_cols=72  Identities=19%  Similarity=0.249  Sum_probs=48.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccCCCCEEEEccc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ..+++|||.| +|..+++++..|.+.| .+|+++.|+..+. +.+.+.+. ...+.  ..++.+....++|+||++..
T Consensus        16 ~~~k~vlIlG-aGGaarai~~al~~~g-~~i~I~nRt~~ka-~~l~~~~~~~~~~~--~~~~~~~~~~~~dliIN~Tp   88 (170)
T d1nyta1          16 RPGLRILLIG-AGGASRGVLLPLLSLD-CAVTITNRTVSRA-EELAKLFAHTGSIQ--ALSMDELEGHEFDLIINATS   88 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSHHHH-HHHHHHTGGGSSEE--ECCSGGGTTCCCSEEEECCS
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHhcccc-eEEEeccchHHHH-HHHHHHHhhccccc--ccccccccccccceeecccc
Confidence            4578999999 5778999999999999 7899999965332 22222222 12233  33344444557999999864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.83  E-value=0.0011  Score=49.23  Aligned_cols=64  Identities=14%  Similarity=0.134  Sum_probs=42.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+| .|.+|+.+++.|+++| ++|++.+|...........     ++..  .+..+....+.|+||.+.
T Consensus         1 MkIgiIG-~G~mG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~-----~~~~--~~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIG-FGEVAQTLASRLRSRG-VEVVTSLEGRSPSTIERAR-----TVGV--TETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTT-CEEEECCTTCCHHHHHHHH-----HHTC--EECCHHHHHTSSEEEECS
T ss_pred             CEEEEEc-HHHHHHHHHHHHHHCC-CeEEEEcCchhHHHHHhhh-----cccc--cccHHHHHhhcCeEEEEe
Confidence            7999997 7999999999999999 9999887754322211111     1111  111222334689999765

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.78  E-value=0.0049  Score=46.43  Aligned_cols=85  Identities=11%  Similarity=0.104  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCCc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASP  110 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~~  110 (346)
                      +.+||.|.| +|.+|+.+++.|.+....+++++.........         .......+-......++|+|+.+..... 
T Consensus         2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------~~~~~~~~~~~~~~~~~D~Vvi~tp~~~-   70 (170)
T d1f06a1           2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------KTPVFDVADVDKHADDVDVLFLCMGSAT-   70 (170)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------SSCEEEGGGGGGTTTTCSEEEECSCTTT-
T ss_pred             CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------ccccccchhhhhhccccceEEEeCCCcc-
Confidence            357899999 79999999999988754676655432211111         1112222222222346999997763221 


Q ss_pred             cccccChHHHHHHHHHHHHHHHHHHHHcCCeEE
Q 019060          111 IFYKYNPVKTIKTNVIGTLNMLGLAKRVGARIL  143 (346)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i  143 (346)
                                       ...++..+.+.|+++|
T Consensus        71 -----------------h~~~a~~aL~aG~~vv   86 (170)
T d1f06a1          71 -----------------DIPEQAPKFAQFACTV   86 (170)
T ss_dssp             -----------------HHHHHHHHHTTTSEEE
T ss_pred             -----------------cHHHHHHHHHCCCcEE
Confidence                             2345666777787766

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.77  E-value=0.0075  Score=43.02  Aligned_cols=87  Identities=16%  Similarity=0.140  Sum_probs=56.5

Q ss_pred             CEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      ++|+|+|+|   |..|..+.+.|.+.|.++|+.+..+.    ....      +.+ ...++.+.. ..+|.++-+..   
T Consensus         9 ksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~----~~i~------G~~-~y~sl~dlp-~~vDlvvi~vp---   73 (129)
T d2csua1           9 KGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE----EEVQ------GVK-AYKSVKDIP-DEIDLAIIVVP---   73 (129)
T ss_dssp             SEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC----SEET------TEE-CBSSTTSCS-SCCSEEEECSC---
T ss_pred             CeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc----cccC------CeE-eecchhhcC-CCCceEEEecC---
Confidence            689999999   99999999998776546898886422    1110      111 122333322 24899887651   


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCe-EEEEeccc
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTSE  149 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~i~~SS~~  149 (346)
                                     -..+..+++.|.+.|++ ++.+|+.+
T Consensus        74 ---------------~~~~~~~~~~~~~~g~~~~vi~s~Gf   99 (129)
T d2csua1          74 ---------------KRFVKDTLIQCGEKGVKGVVIITAGF   99 (129)
T ss_dssp             ---------------HHHHHHHHHHHHHHTCCEEEECCCSS
T ss_pred             ---------------hHHhHHHHHHHHHcCCCEEEEecccc
Confidence                           22456678888888884 67776653

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.75  E-value=0.0035  Score=47.69  Aligned_cols=34  Identities=21%  Similarity=0.080  Sum_probs=31.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|||.|+|+ |.+|..++..|.++| |+|.+++|..
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G-~~V~~~~r~~   34 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKG-QSVLAWDIDA   34 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCC-CEEEEEECCH
Confidence            479999995 999999999999999 9999999853

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0028  Score=43.95  Aligned_cols=63  Identities=17%  Similarity=0.211  Sum_probs=46.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC-------CCCEEEE
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI-------EVDQIYH  103 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~d~vi~  103 (346)
                      ..||.|+| +|++|+-++....+.| ++|++++.+........       .-+++.+|+.|.+.+       ++|+|-.
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG-~~v~v~d~~~~~PA~~v-------a~~~i~~~~~d~~~l~~~~~~~~~DviT~   80 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLG-VEVIAVDRYADAPAMHV-------AHRSHVINMLDGDALRRVVELEKPHYIVP   80 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTT-CEEEEEESSTTCGGGGG-------SSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCC-CEEEEEcCCCCCchhhc-------CCeEEECCCCCHHHHHHHHHhhCCceEEE
Confidence            45899999 8999999999999999 99999997543222111       225677888886532       4788864

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.0024  Score=50.52  Aligned_cols=71  Identities=14%  Similarity=0.153  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC----------------chhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-
Q 019060           31 SNMRILVTGG----------------AGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-   93 (346)
Q Consensus        31 ~~~~ilItG~----------------tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-   93 (346)
                      .+|+||||+|                ||.+|.+|++++.++| ++|+++........        ...+..+.....+. 
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~G-a~V~li~g~~~~~~--------p~~~~~~~~~t~~~m   75 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRG-ANVTLVSGPVSLPT--------PPFVKRVDVMTALEM   75 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTT-CEEEEEECSCCCCC--------CTTEEEEECCSHHHH
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcC-CchhhhhcccccCc--------ccccccceehhhHHH
Confidence            4788888876                7999999999999999 99999876432211        12445444332221 


Q ss_pred             ------ccCCCCEEEEcccCCCc
Q 019060           94 ------LLIEVDQIYHLACPASP  110 (346)
Q Consensus        94 ------~~~~~d~vi~~a~~~~~  110 (346)
                            ...+.|++|++|+....
T Consensus        76 ~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          76 EAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHGGGCSEEEECCBCCSE
T ss_pred             HHHHHhhhccceeEeeeechhhh
Confidence                  22369999999997664

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.70  E-value=0.0018  Score=47.92  Aligned_cols=65  Identities=12%  Similarity=0.154  Sum_probs=43.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |+|.++| .|-+|.++++.|+++|.++|.+.+|+..    ....+....++... .|.  .+..+.|+||.+.
T Consensus         1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~----~~~~l~~~~~~~~~-~~~--~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAE----KRERLEKELGVETS-ATL--PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHH----HHHHHHHHTCCEEE-SSC--CCCCTTSEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChh----HHHHhhhhcccccc-ccc--ccccccceEEEec
Confidence            7999998 5999999999999998789999988542    22222221233332 222  2234589999754

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.66  E-value=0.014  Score=38.39  Aligned_cols=70  Identities=14%  Similarity=0.095  Sum_probs=46.0

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      +|||-++|-.|-==+.|++.|.+.| +.|.+-++.......    .+...++++..+. ......++|.||...+.
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G-~~VsGSD~~~~~~t~----~L~~~Gi~i~~gh-~~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNG-NDVYGSNIEETERTA----YLRKLGIPIFVPH-SADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEECSSCCHHHH----HHHHTTCCEESSC-CTTSCCCCSEEEECTTC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCC-CeEEEEeCCCChhHH----HHHHCCCeEEeee-cccccCCCCEEEEecCc
Confidence            4789988754443347899999999 999999986432222    2333567665442 22223468999987764

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.66  E-value=0.0024  Score=48.31  Aligned_cols=73  Identities=15%  Similarity=0.280  Sum_probs=48.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcC-CCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIG-HPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ..+++|+|.| +|..|++++..|.+.+ .+|+++.|+.... +.+.+.+. ...+.....|  +.....+|+||++...
T Consensus        16 ~~~k~vlIlG-aGGaarai~~aL~~~~-~~i~I~nR~~~~a-~~l~~~~~~~~~~~~~~~~--~~~~~~~diiIN~tp~   89 (171)
T d1p77a1          16 RPNQHVLILG-AGGATKGVLLPLLQAQ-QNIVLANRTFSKT-KELAERFQPYGNIQAVSMD--SIPLQTYDLVINATSA   89 (171)
T ss_dssp             CTTCEEEEEC-CSHHHHTTHHHHHHTT-CEEEEEESSHHHH-HHHHHHHGGGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred             CCCCEEEEEC-CcHHHHHHHHHHcccC-ceeeeccchHHHH-HHHHHHHhhccccchhhhc--cccccccceeeecccc
Confidence            3578999998 5777999999999877 8999999975322 22222222 1233333333  3345679999998643

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.64  E-value=0.004  Score=48.40  Aligned_cols=32  Identities=38%  Similarity=0.507  Sum_probs=29.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |||.|+| .||+|..++..|.+.| |+|++++.+
T Consensus         1 MkI~ViG-lG~vGl~~a~~la~~g-~~V~g~D~n   32 (202)
T d1mv8a2           1 MRISIFG-LGYVGAVCAGCLSARG-HEVIGVDVS   32 (202)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSC
T ss_pred             CEEEEEC-CCHhHHHHHHHHHhCC-CcEEEEeCC
Confidence            7999996 9999999999999999 999999864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.50  E-value=0.0058  Score=43.12  Aligned_cols=35  Identities=26%  Similarity=0.377  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|.| .|++|.+++..|.+.| .+|+++.|..
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g-~~Vtli~~~~   63 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAG-VHVSLVETQP   63 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhccc-ceEEEEeecc
Confidence            457999998 8999999999999999 9999998865

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00079  Score=51.25  Aligned_cols=35  Identities=14%  Similarity=0.168  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+.+|||+||+|.+|...++.+...| .+|++++++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G-~~vi~~~~~   62 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYG-LKILGTAGT   62 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred             CCCEEEEEeccccccccccccccccC-ccccccccc
Confidence            57799999999999999999999999 899998874

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.42  E-value=0.025  Score=37.83  Aligned_cols=72  Identities=10%  Similarity=-0.031  Sum_probs=46.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ...++|.++|-.|--=+.||+.|.+.| ++|.+.++...   .....+.. .++++..+.-.+ ...++|.||...+.
T Consensus         6 ~~~~~ihfiGigG~GMs~LA~~L~~~G-~~VsGSD~~~~---~~~~~L~~-~Gi~v~~g~~~~-~i~~~d~vV~S~AI   77 (96)
T d1p3da1           6 RRVQQIHFIGIGGAGMSGIAEILLNEG-YQISGSDIADG---VVTQRLAQ-AGAKIYIGHAEE-HIEGASVVVVSSAI   77 (96)
T ss_dssp             TTCCEEEEETTTSTTHHHHHHHHHHHT-CEEEEEESCCS---HHHHHHHH-TTCEEEESCCGG-GGTTCSEEEECTTS
T ss_pred             hhCCEEEEEEECHHHHHHHHHHHHhCC-CEEEEEeCCCC---hhhhHHHH-CCCeEEECCccc-cCCCCCEEEECCCc
Confidence            346789988743332277899999999 99999998532   22222222 467666554433 23578999987654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.36  E-value=0.002  Score=48.48  Aligned_cols=67  Identities=13%  Similarity=0.248  Sum_probs=44.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++|+|+| +|..|++++..|.+.|..+|+++.|+.. +.+.+...+.   ...+    ......++|+||++..
T Consensus        16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~-ka~~L~~~~~---~~~~----~~~~~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVK-TGQYLAALYG---YAYI----NSLENQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHH-HHHHHHHHHT---CEEE----SCCTTCCCSEEEECSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHH-HHHHHHHhhh---hhhh----hcccccchhhheeccc
Confidence            467999999 5889999999999999558999998642 2223333222   1221    1222346899998754

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.36  E-value=0.0091  Score=44.77  Aligned_cols=36  Identities=28%  Similarity=0.160  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|+|+| +|.+|...++.+...| .+|++++++.
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~G-a~vi~v~~~~   60 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYG-AFVVCTARSP   60 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCH
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhc-ccccccchHH
Confidence            3467999997 6899999999999999 8999998743

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.31  E-value=0.0079  Score=45.71  Aligned_cols=32  Identities=38%  Similarity=0.481  Sum_probs=30.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|.|+| +|-.|..++..|.++| ++|.+..|.
T Consensus         1 MkI~ViG-aG~~GtalA~~la~~g-~~V~l~~r~   32 (180)
T d1txga2           1 MIVSILG-AGAMGSALSVPLVDNG-NEVRIWGTE   32 (180)
T ss_dssp             CEEEEES-CCHHHHHHHHHHHHHC-CEEEEECCG
T ss_pred             CEEEEEC-CCHHHHHHHHHHHHCC-CEEEEEEec
Confidence            8999999 7999999999999999 999999884

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.31  E-value=0.0027  Score=46.98  Aligned_cols=69  Identities=16%  Similarity=0.277  Sum_probs=50.5

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      .|+|+|. |-+|..+++.|.+.| +.|++++.............. ..++.++.+|.+++..+      ++|.||-+.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~-~~v~vId~d~~~~~~~~~~~~-~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~   79 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRG-QNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcC-CCEEEEeccchhHHHHHHHhh-cCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence            5888885 899999999999999 999998864322112222222 35789999999997543      588998765

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.29  E-value=0.0029  Score=47.56  Aligned_cols=71  Identities=20%  Similarity=0.201  Sum_probs=46.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-----ccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-----LLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~d~vi~~a~  106 (346)
                      +.+|||+||+|.+|...++.....| .+|++++++.. +.+.+.++-. ..+ +...|....     ...++|.|+.+.|
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~G-a~Viat~~s~~-k~~~~~~lGa-d~v-i~~~~~~~~~~~~~~~~gvd~vid~vg   99 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRG-YDVVASTGNRE-AADYLKQLGA-SEV-ISREDVYDGTLKALSKQQWQGAVDPVG   99 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHT-CCEEEEESSSS-THHHHHHHTC-SEE-EEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcC-CceEEEecCHH-HHHHHHhhcc-cce-EeccchhchhhhcccCCCceEEEecCc
Confidence            5679999999999999999999999 99999988643 2333333322 111 111222111     1236999998874

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.26  E-value=0.0052  Score=46.30  Aligned_cols=34  Identities=21%  Similarity=0.386  Sum_probs=28.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      |.+||.|-| -|-||+.+++.|+++...+++.+..
T Consensus         1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd   34 (172)
T d2czca2           1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITK   34 (172)
T ss_dssp             CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred             CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEec
Confidence            568999999 7999999999999877567776654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=96.14  E-value=0.0012  Score=50.29  Aligned_cols=36  Identities=14%  Similarity=0.036  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+||+|.+|..+++.+...| .+|++++++.
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~G-a~Vi~~~~s~   63 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALG-AKLIGTVGTA   63 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCEEEEEccccccchHHHHHHHHhC-CeEeecccch
Confidence            46799999999999999999999999 9999998854

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.12  E-value=0.003  Score=47.23  Aligned_cols=34  Identities=21%  Similarity=0.277  Sum_probs=30.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +++|.++| .|.+|+.+++.|+++| |+|.+.+|+.
T Consensus         1 M~kIg~IG-lG~MG~~iA~~L~~~g-~~v~~~d~~~   34 (162)
T d3cuma2           1 MKQIAFIG-LGHMGAPMATNLLKAG-YLLNVFDLVQ   34 (162)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSSH
T ss_pred             CCEEEEEE-EHHHHHHHHHHHHHCC-CeEEEEECch
Confidence            46899998 8999999999999999 9999999853

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.11  E-value=0.0029  Score=47.28  Aligned_cols=64  Identities=17%  Similarity=0.307  Sum_probs=42.8

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+| .|.+|+.+++.|+++| |+|++.+|+.    +....+.. .....  ++.......++|+||-+.
T Consensus         1 MkIgiIG-lG~MG~~~A~~L~~~G-~~V~~~d~~~----~~~~~~~~-~~~~~--~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIG-LGIMGKPMSKNLLKAG-YSLVVSDRNP----EAIADVIA-AGAET--ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHH-TTCEE--CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEe-hhHHHHHHHHHHHHCC-CeEEEEeCCc----chhHHHHH-hhhhh--cccHHHHHhCCCeEEEEc
Confidence            7899998 8999999999999999 9999999853    22222221 12221  121122233689998765

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0048  Score=47.51  Aligned_cols=35  Identities=23%  Similarity=0.408  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +-++|.|+|+ |.+|+.++..++.+| ++|++++++.
T Consensus         3 ~IkkvaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~   37 (192)
T d1f0ya2           3 IVKHVTVIGG-GLMGAGIAQVAAATG-HTVVLVDQTE   37 (192)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTT-CEEEEECSCH
T ss_pred             eeEEEEEECc-CHHHHHHHHHHHhCC-CcEEEEECCh
Confidence            4579999995 999999999999999 9999999864

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.95  E-value=0.011  Score=44.90  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+||+|.+|...++.+...| .+|++++++.
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g-~~vi~~~~~~   60 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSD   60 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSH
T ss_pred             CCCEEEEECCCCCcccccchhhcccc-ccceeeeccc
Confidence            46799999999999999999999999 8999888743

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.94  E-value=0.0032  Score=47.84  Aligned_cols=34  Identities=26%  Similarity=0.462  Sum_probs=31.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .|||-|+| .|.+|..++++|+++| |+|.+.+|+.
T Consensus         1 ~MkIGvIG-lG~MG~~ma~~L~~~G-~~V~~~dr~~   34 (178)
T d1pgja2           1 SMDVGVVG-LGVMGANLALNIAEKG-FKVAVFNRTY   34 (178)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred             CCEEEEEe-ehHHHHHHHHHHHHCC-CeEEEEECCH
Confidence            37899998 9999999999999999 9999999854

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=95.83  E-value=0.0038  Score=47.37  Aligned_cols=35  Identities=31%  Similarity=0.357  Sum_probs=31.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +.+|||+||+|.+|...++.+...| .+|++++|+.
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~G-a~Via~~~~~   66 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLG-YQVVAVSGRE   66 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTT-CCEEEEESCG
T ss_pred             CCcEEEEEccccchHHHHHHHHHcC-CCeEEEecch
Confidence            3589999999999999999999999 9999998854

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.80  E-value=0.011  Score=43.59  Aligned_cols=70  Identities=14%  Similarity=0.206  Sum_probs=38.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHh-cCCCeEEEE-eCCCCCCcchhhhhcCCCCeeEEeccc----CCcccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLME-NEKNEVIVV-DNYFTGSKDNLRKWIGHPRFELIRHDV----TEPLLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~-~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~d~----~~~~~~~~d~vi~~a  105 (346)
                      .+||.|+| +|.+|+.+...+++ ....+++++ +|+.........+.   .++......+    .++++.++|+||.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~---~~i~~~~~~~d~l~~~~~~~~iDiVf~AT   79 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQR---MGVTTTYAGVEGLIKLPEFADIDFVFDAT   79 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHH---TTCCEESSHHHHHHHSGGGGGEEEEEECS
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhh---cCCcccccceeeeeecccccccCEEEEcC
Confidence            47999999 99999976544554 442466665 45332222122221   2344433222    223445689999754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.72  E-value=0.011  Score=44.78  Aligned_cols=36  Identities=19%  Similarity=0.207  Sum_probs=30.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|||+|+ |-+|...++.+...|...|++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~   63 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP   63 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccc
Confidence            4679999996 88999999999999934788888743

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.0049  Score=46.30  Aligned_cols=75  Identities=12%  Similarity=0.062  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACP  107 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~  107 (346)
                      ..+.+|+|.|+ |.+|...++.+...| .++++++++.. +.+..+++-...-++....+.......++|++|.+.|.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~G-a~~i~~~~~~~-~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~  103 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMG-AHVVAFTTSEA-KREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAA  103 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESSGG-GHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhccc-ccchhhccchh-HHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeec
Confidence            45789999986 889999999999899 88888887543 22222232211011111111111223469999998864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=95.66  E-value=0.0043  Score=47.64  Aligned_cols=41  Identities=12%  Similarity=0.032  Sum_probs=32.9

Q ss_pred             CCCEEEE-EcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcc
Q 019060           31 SNMRILV-TGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKD   72 (346)
Q Consensus        31 ~~~~ilI-tG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~   72 (346)
                      .+.+++| +||+|.+|...++.+...| .+|+++.|+....++
T Consensus        28 ~g~~vli~~ga~g~vG~~aiqlAk~~G-a~vI~~v~~~~~~~~   69 (189)
T d1gu7a2          28 PGKDWFIQNGGTSAVGKYASQIGKLLN-FNSISVIRDRPNLDE   69 (189)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHT-CEEEEEECCCTTHHH
T ss_pred             CCCEEEEEeCCCchHHHHHHHHHhhcC-CeEEEEEecccccch
Confidence            3567777 5999999999999999999 899998886554443

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.64  E-value=0.0098  Score=45.25  Aligned_cols=75  Identities=8%  Similarity=0.035  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhh---c-CCCCeeEEecccCCcc-----cCCCCEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKW---I-GHPRFELIRHDVTEPL-----LIEVDQI  101 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~~d~~~~~-----~~~~d~v  101 (346)
                      .+++|+|+|+ |..|++++..|.+.|...+++++|+..... ....+   + ..-.......++.+..     ...+|+|
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFD-KALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHH-HHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHH-HHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            4689999995 788999999999999678999999653322 21111   1 1112223344444432     2368999


Q ss_pred             EEcccC
Q 019060          102 YHLACP  107 (346)
Q Consensus       102 i~~a~~  107 (346)
                      |++...
T Consensus        95 IN~Tp~  100 (182)
T d1vi2a1          95 TNGTKV  100 (182)
T ss_dssp             EECSST
T ss_pred             ccccCC
Confidence            998643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.03  Score=41.81  Aligned_cols=36  Identities=25%  Similarity=0.228  Sum_probs=29.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|+|+|+ |.+|...++.+...|...|++++++.
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~   61 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA   61 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH
Confidence            4679999986 99999999999999944788888743

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.34  E-value=0.014  Score=40.73  Aligned_cols=34  Identities=21%  Similarity=0.341  Sum_probs=30.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|.| .|++|..++..|.+.| .+|+++.|..
T Consensus        22 p~~v~IiG-gG~ig~E~A~~l~~~G-~~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIG-GGYIGIELGTAYANFG-TKVTILEGAG   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             CCeEEEEC-CCccceeeeeeecccc-cEEEEEEecc
Confidence            36899999 8999999999999999 9999998753

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.32  E-value=0.039  Score=39.64  Aligned_cols=86  Identities=13%  Similarity=0.132  Sum_probs=56.4

Q ss_pred             CCEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      .++|+|+|+|   +-.|..+++.|.+.| |+|+.+....    ...      .+... ..++.+.. ..+|.++-+..  
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g-~~v~pVnP~~----~~i------~G~~~-~~sl~dlp-~~iD~v~i~vp--   83 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHG-YDVYPVNPKY----EEV------LGRKC-YPSVLDIP-DKIEVVDLFVK--   83 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEE------TTEEC-BSSGGGCS-SCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCC-CEEEEECCcc----ccc------CCCcc-cccccccC-ccceEEEEEeC--
Confidence            5799999998   889999999999999 8998886421    111      11111 22333322 24888876651  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                      ...+..+++.|.+.|++.+++.+.
T Consensus        84 ----------------~~~~~~~~~e~~~~g~k~v~~~~G  107 (139)
T d2d59a1          84 ----------------PKLTMEYVEQAIKKGAKVVWFQYN  107 (139)
T ss_dssp             ----------------HHHHHHHHHHHHHHTCSEEEECTT
T ss_pred             ----------------HHHHHHHHHHHHHhCCCEEEEecc
Confidence                            224567788888888876666443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.24  E-value=0.019  Score=40.43  Aligned_cols=35  Identities=23%  Similarity=0.417  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|.| .|++|.+++..|.+.| .+|+++.|..
T Consensus        29 ~~k~vvViG-gG~iG~E~A~~l~~~g-~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIG-SGYIGIEAAEAFAKAG-KKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             CCCEEEEEC-ChHHHHHHHHHhhccc-eEEEEEEecC
Confidence            457899998 8999999999999999 9999998753

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.23  E-value=0.013  Score=46.73  Aligned_cols=37  Identities=24%  Similarity=0.347  Sum_probs=32.6

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +...+||+|+| .|..|...+..|.++| ++|+++.|..
T Consensus         3 ~~~~~kVvVIG-aGiaGl~~A~~L~~~G-~~V~vier~~   39 (268)
T d1c0pa1           3 MHSQKRVVVLG-SGVIGLSSALILARKG-YSVHILARDL   39 (268)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSC
T ss_pred             CCCCCcEEEEC-ccHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            34467999999 8999999999999999 9999999853

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.21  E-value=0.015  Score=40.94  Aligned_cols=34  Identities=24%  Similarity=0.289  Sum_probs=30.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|+| .|+||.+++..|.+.| .+|+++.|..
T Consensus        23 p~~~vIiG-~G~ig~E~A~~l~~lG-~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIG-GGIIGLEMGSVYSRLG-SKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCeEEEEC-CCchHHHHHHHHHhhC-cceeEEEecc
Confidence            36899999 8999999999999999 9999998743

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.20  E-value=0.0095  Score=43.84  Aligned_cols=33  Identities=24%  Similarity=0.475  Sum_probs=30.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |||.++| +|-+|+++++.|++.| +++++.+|+.
T Consensus         1 MkIg~IG-~G~mG~al~~~l~~~~-~~i~v~~r~~   33 (152)
T d2ahra2           1 MKIGIIG-VGKMASAIIKGLKQTP-HELIISGSSL   33 (152)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHTTSS-CEEEEECSSH
T ss_pred             CEEEEEe-ccHHHHHHHHHHHhCC-CeEEEEcChH
Confidence            7999997 9999999999999999 9999998853

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.15  E-value=0.0096  Score=45.46  Aligned_cols=34  Identities=15%  Similarity=0.219  Sum_probs=30.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++|.|+|+ |.+|+.++..++.+| ++|++++++.
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G-~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKG-TPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTT-CCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCC-CeEEEEECCH
Confidence            358999995 999999999999999 9999999854

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.13  E-value=0.018  Score=40.35  Aligned_cols=34  Identities=29%  Similarity=0.274  Sum_probs=30.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|+| +|+||..++..|.+.| .+|+++.|..
T Consensus        22 p~~i~IiG-~G~ig~E~A~~l~~~G-~~Vtiv~~~~   55 (119)
T d3lada2          22 PGKLGVIG-AGVIGLELGSVWARLG-AEVTVLEAMD   55 (119)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHHHHcC-CceEEEEeec
Confidence            37899999 8999999999999999 9999998764

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.09  E-value=0.016  Score=40.40  Aligned_cols=34  Identities=15%  Similarity=0.277  Sum_probs=30.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++|+|.| .|++|.+++..|.+.| .+|+++.|..
T Consensus        22 p~~v~IiG-gG~iG~E~A~~l~~~g-~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVG-SGYIAVELINVIKRLG-IDSYIFARGN   55 (117)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECSSS
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhcc-ccceeeehhc
Confidence            46899998 8999999999999999 9999998854

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.07  E-value=0.017  Score=40.27  Aligned_cols=34  Identities=24%  Similarity=0.341  Sum_probs=30.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++|+|.| .|++|.+++..|.+.| .+|+++.|..
T Consensus        21 p~~vvIiG-gG~ig~E~A~~l~~~G-~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVG-AGYIGVELGGVINGLG-AKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCEEEEEC-CChhhHHHHHHhhccc-cEEEEEeecc
Confidence            36899998 8999999999999999 9999998853

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.01  E-value=0.021  Score=43.01  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=28.0

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -||.|.| .|-||+.+++.|.+++..+|+++...
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            4899998 89999999999999876788877653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.01  E-value=0.016  Score=43.65  Aligned_cols=36  Identities=17%  Similarity=0.166  Sum_probs=29.8

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|+|+|+ |.+|...++.+...|..+|++++++
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~   61 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSR   61 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCC
T ss_pred             CCCCEEEEEcC-Ccchhhhhhhhhcccccccccccch
Confidence            34779999985 9999999999998884478888864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.95  E-value=0.0079  Score=46.09  Aligned_cols=34  Identities=26%  Similarity=0.207  Sum_probs=30.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ++||.|+| +|-.|.+++..|.++| |+|++..|+.
T Consensus         7 m~KI~ViG-aG~wGtAlA~~La~~g-~~V~l~~r~~   40 (189)
T d1n1ea2           7 LNKAVVFG-SGAFGTALAMVLSKKC-REVCVWHMNE   40 (189)
T ss_dssp             EEEEEEEC-CSHHHHHHHHHHHTTE-EEEEEECSCH
T ss_pred             eceEEEEC-CCHHHHHHHHHHHHcC-CeEEEEEecH
Confidence            35799999 8899999999999999 9999999853

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.93  E-value=0.02  Score=42.76  Aligned_cols=36  Identities=25%  Similarity=0.288  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+.+|+|+|++|-+|...++.+...|...|++++++
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~   62 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR   62 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccc
Confidence            467999999999999999999998885578888764

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.93  E-value=0.017  Score=43.10  Aligned_cols=72  Identities=19%  Similarity=0.124  Sum_probs=45.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEe-ccc---CCcccCCCCEEEEcc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIR-HDV---TEPLLIEVDQIYHLA  105 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~d~---~~~~~~~~d~vi~~a  105 (346)
                      ..+.+|+|+|+ |.+|...++.+...| .+|++++++.. +.+..+++ ...  ..+. .+.   ......++|.++.+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G-~~vi~~~~~~~-k~~~a~~l-Ga~--~~i~~~~~~~~~~~~~~~~d~vi~~~   99 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMG-AETYVISRSSR-KREDAMKM-GAD--HYIATLEEGDWGEKYFDTFDLIVVCA   99 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHT-CEEEEEESSST-THHHHHHH-TCS--EEEEGGGTSCHHHHSCSCEEEEEECC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhcc-ccccccccchh-HHHHhhcc-CCc--EEeeccchHHHHHhhhcccceEEEEe
Confidence            35789999986 999999999888889 89999998643 33333332 211  1221 111   111223689999887


Q ss_pred             cC
Q 019060          106 CP  107 (346)
Q Consensus       106 ~~  107 (346)
                      +.
T Consensus       100 ~~  101 (168)
T d1piwa2         100 SS  101 (168)
T ss_dssp             SC
T ss_pred             cC
Confidence            54

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.91  E-value=0.071  Score=36.88  Aligned_cols=82  Identities=21%  Similarity=0.252  Sum_probs=53.3

Q ss_pred             CEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           33 MRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        33 ~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      |+|.|.|+|   +-.|..+.+.|++.| |+|+.+....    +..      .+.+.+ .++.+... .+|.++-+..   
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g-~~V~pVnP~~----~~i------~G~~~y-~sl~~lp~-~~D~vvi~vp---   65 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKG-FEVLPVNPNY----DEI------EGLKCY-RSVRELPK-DVDVIVFVVP---   65 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTT-CEEEEECTTC----SEE------TTEECB-SSGGGSCT-TCCEEEECSC---
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCC-CEEEEEcccc----ccc------cCcccc-ccchhccc-cceEEEEEeC---
Confidence            689999988   789999999999999 8988885321    111      122222 23333222 4898886541   


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEE
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLT  145 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~  145 (346)
                                     -..+..+++.|.+.|.+.+++
T Consensus        66 ---------------~~~~~~~l~~~~~~g~k~v~~   86 (116)
T d1y81a1          66 ---------------PKVGLQVAKEAVEAGFKKLWF   86 (116)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred             ---------------HHHHHHHHHHHHhcCCceEEe
Confidence                           223556777788888876654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.89  E-value=0.044  Score=41.24  Aligned_cols=35  Identities=20%  Similarity=0.224  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|+| +|..|.+.+..|.++| |+|+++.+..
T Consensus        42 ~~k~V~IIG-aGPAGL~AA~~la~~G-~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVG-AGPAGLAFAINAAARG-HQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEESSS
T ss_pred             CCcEEEEEC-ccHHHHHHHHHHHhhc-cceEEEeccC
Confidence            468999999 8999999999999999 9999998753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.89  E-value=0.024  Score=40.50  Aligned_cols=35  Identities=23%  Similarity=0.487  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|+| +|++|.+++..|.+.| .+|+++.+..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g-~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKAN-MHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhC-cceeeeeecc
Confidence            357999998 8999999999999999 9999998753

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.88  E-value=0.018  Score=40.44  Aligned_cols=34  Identities=26%  Similarity=0.416  Sum_probs=30.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++++|.| .|++|-+++..|.+.| ++|+++.|..
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g-~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAG-YHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhccc-ceEEEEeccc
Confidence            36899988 8999999999999999 9999998753

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.84  E-value=0.004  Score=47.73  Aligned_cols=34  Identities=24%  Similarity=0.153  Sum_probs=27.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      +.+|||+||+|-+|...++.+...|...|+++++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~   64 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICG   64 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEES
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccc
Confidence            3689999999999999999998888334555554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.80  E-value=0.036  Score=40.94  Aligned_cols=37  Identities=14%  Similarity=0.250  Sum_probs=32.6

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .-.+++|+|.|-+..+|+.|+..|.+.| ..|++....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~g-atVt~~h~~   70 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAG-CTTTVTHRF   70 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTT-CEEEEECSS
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhh-ccccccccc
Confidence            3468999999999999999999999999 999887653

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.78  E-value=0.023  Score=40.13  Aligned_cols=33  Identities=18%  Similarity=0.225  Sum_probs=30.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ++++|.| .|++|..++..|.+.| .+|+++.|..
T Consensus        23 k~vvIvG-gG~iG~E~A~~l~~~G-~~Vtlv~~~~   55 (125)
T d3grsa2          23 GRSVIVG-AGYIAVEMAGILSALG-SKTSLMIRHD   55 (125)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CEEEEEc-CCccHHHHHHHHhcCC-cEEEEEeecc
Confidence            6899999 8999999999999999 9999998864

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.74  E-value=0.028  Score=42.04  Aligned_cols=114  Identities=11%  Similarity=0.098  Sum_probs=61.9

Q ss_pred             CCEEEEEcCchhHHHH--HHHHHHhcC---CCeEEEEeCCCCCCcch---hhhh--cCCCCeeEEecccCCcccCCCCEE
Q 019060           32 NMRILVTGGAGFIGSH--LVDKLMENE---KNEVIVVDNYFTGSKDN---LRKW--IGHPRFELIRHDVTEPLLIEVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~--l~~~L~~~g---~~~V~~~~r~~~~~~~~---~~~~--~~~~~~~~~~~d~~~~~~~~~d~v  101 (346)
                      .|||.|+|| |.+|..  ++..|+...   ..+++.++.+.......   ....  ......++...+-......++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            689999996 877764  444555432   15899998853211110   0110  012234444433333455679999


Q ss_pred             EEcccCCCccccccChH------------------------HHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          102 YHLACPASPIFYKYNPV------------------------KTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       102 i~~a~~~~~~~~~~~~~------------------------~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      +..++.........+..                        .....|+.-...+++..++...  .+|.+|
T Consensus        81 v~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1          81 INTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             EECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             eeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEEC
Confidence            99886543211100000                        0013477778888888887764  566555

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.60  E-value=0.024  Score=39.30  Aligned_cols=34  Identities=26%  Similarity=0.326  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|.| .|++|.+++..|.+.| ++|+++.|..
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g-~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLG-AQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcc-cceEEEeeec
Confidence            36899988 8999999999999999 9999998753

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=94.42  E-value=0.084  Score=39.43  Aligned_cols=37  Identities=16%  Similarity=0.052  Sum_probs=30.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|+|.|+ |.+|...++.+...|..+|++++++.
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~   62 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK   62 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH
Confidence            34789999985 89999999999999955788887743

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.38  E-value=0.026  Score=39.66  Aligned_cols=32  Identities=22%  Similarity=0.207  Sum_probs=29.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ++++|+| .|+||.+++..|.+.| .+|+++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG-~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIG-LDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcC-CeEEEEEec
Confidence            5799998 8999999999999999 999999874

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.36  E-value=0.019  Score=36.63  Aligned_cols=32  Identities=22%  Similarity=0.091  Sum_probs=29.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|.|.| +|++|+-++....+-| ++|.+++-.
T Consensus         2 k~vgIlG-~GQLgrMl~~Aa~~LG-~~v~vldp~   33 (78)
T d3etja2           2 KQVCVLG-NGQLGRMLRQAGEPLG-IAVWPVGLD   33 (78)
T ss_dssp             EEEEEEB-CSHHHHHHHHHHGGGT-EEEEEECTT
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHcC-CEEEEEcCC
Confidence            6899999 8999999999999999 999999853

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.24  E-value=0.024  Score=42.70  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=30.6

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +.+|.++| .|.+|..+++.|+++| |+|++.+|+.
T Consensus         2 ~~nIg~IG-lG~MG~~mA~~L~~~G-~~V~v~dr~~   35 (176)
T d2pgda2           2 QADIALIG-LAVMGQNLILNMNDHG-FVVCAFNRTV   35 (176)
T ss_dssp             CBSEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSST
T ss_pred             CCcEEEEe-EhHHHHHHHHHHHHCC-CeEEEEcCCH
Confidence            34789999 7999999999999999 9999999864

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.22  E-value=0.1  Score=39.22  Aligned_cols=35  Identities=20%  Similarity=0.162  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|.|+| .|-||+.+++.|..-| .+|.+++|..
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g-~~v~~~d~~~   75 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALG-AQVRGFSRTP   75 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             cCceEEEec-cccccccceeeeeccc-cccccccccc
Confidence            478999999 8889999999999999 9999999864

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.08  E-value=0.069  Score=39.78  Aligned_cols=33  Identities=21%  Similarity=0.427  Sum_probs=27.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      |++|.|-| -|-||+.+++.|..++..+|+.+..
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            45899998 8999999999998888567776654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=94.04  E-value=0.026  Score=42.42  Aligned_cols=37  Identities=16%  Similarity=0.124  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|+|+| .|.||...++.+...|...|++.+++.
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~   63 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDING   63 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccch
Confidence            3468999997 599999999999999944677777643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.97  E-value=0.03  Score=39.35  Aligned_cols=34  Identities=29%  Similarity=0.364  Sum_probs=30.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|+| .|+||-+++..|.+.| .+|+++.|..
T Consensus        25 p~~~viiG-~G~iglE~A~~~~~~G-~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIG-AGYIGLEMGSVWGRIG-SEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESC-CSHHHHHHHHHHHHHT-CEEEEECSSS
T ss_pred             CCeEEEEc-cchHHHHHHHHHHhcC-CeEEEEEEcc
Confidence            46899999 8999999999999999 9999998854

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.96  E-value=0.039  Score=38.85  Aligned_cols=34  Identities=21%  Similarity=0.253  Sum_probs=30.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -++++|.| .|+||.+++..|.+.| .+|+++.+..
T Consensus        26 p~~vvIiG-gG~IG~E~A~~~~~~G-~~Vtive~~~   59 (125)
T d1ojta2          26 PGKLLIIG-GGIIGLEMGTVYSTLG-SRLDVVEMMD   59 (125)
T ss_dssp             CSEEEEES-CSHHHHHHHHHHHHHT-CEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHhhcCC-CEEEEEEeec
Confidence            36899999 8999999999999999 9999998754

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.94  E-value=0.027  Score=43.19  Aligned_cols=31  Identities=42%  Similarity=0.622  Sum_probs=26.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |||.|+| .||+|..++..| +.| ++|++++-+
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g-~~V~g~Din   31 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQ-NEVTIVDIL   31 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTT-SEEEEECSC
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCC-CcEEEEECC
Confidence            8999997 999999998755 678 999999864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.93  E-value=0.086  Score=46.93  Aligned_cols=102  Identities=8%  Similarity=0.154  Sum_probs=64.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhh-------------------hcC--CC--CeeEEec
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRK-------------------WIG--HP--RFELIRH   88 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-------------------~~~--~~--~~~~~~~   88 (346)
                      +.+|+|.|+ |.+|.++++.|...|...+++++...-. ...+.+                   .+.  .+  .+..+..
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~-~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~  102 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVS-GEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE  102 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCC-HHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCC-hhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence            469999996 6799999999999997788888753211 111111                   010  12  2344544


Q ss_pred             ccCC-----cc-cCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecccccC
Q 019060           89 DVTE-----PL-LIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG  152 (346)
Q Consensus        89 d~~~-----~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~~v~~  152 (346)
                      +..+     .. ..++|+||.+..                 +......+-+.|++.++.+|..+|.+.||
T Consensus       103 ~~~~~~~~~~~~~~~~dvVv~~~~-----------------~~~~~~~l~~~c~~~~ip~i~~~~~G~~G  155 (529)
T d1yova1         103 SPENLLDNDPSFFCRFTVVVATQL-----------------PESTSLRLADVLWNSQIPLLICRTYGLVG  155 (529)
T ss_dssp             CHHHHHHSCGGGGGGCSEEEEESC-----------------CHHHHHHHHHHHHHHTCCEEEEEEETTEE
T ss_pred             CchhhhhhHHHHhcCCCEEEECCC-----------------CHHHHHHHHHHHHHcCCCEEEEeccCCEE
Confidence            4332     11 235899997541                 22234457788988898999998877776

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=93.81  E-value=0.041  Score=45.62  Aligned_cols=34  Identities=32%  Similarity=0.557  Sum_probs=30.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|+|+|+| +|.-|...|..|.+.| ++|+++.++.
T Consensus         2 ~KKI~IIG-aG~sGL~aA~~L~k~G-~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVG-AGFSGAVIGRQLAEKG-HQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEESSS
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHhCC-CCEEEEECCC
Confidence            58999999 8999999999999999 9999998754

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=93.81  E-value=0.026  Score=42.46  Aligned_cols=36  Identities=17%  Similarity=0.131  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+.+|+|+|+ |.+|...++.+...|..+|++++++.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~   64 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK   64 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcH
Confidence            4678999985 99999999999999855789988754

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.74  E-value=0.084  Score=39.12  Aligned_cols=38  Identities=18%  Similarity=0.225  Sum_probs=33.6

Q ss_pred             cCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           29 FQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        29 ~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .-.+++|+|+|-+.-+|+.|+..|+++| ..|++.....
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~g-atVt~~~~~t   73 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNN-ATVTTCHSKT   73 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTT-CEEEEECTTC
T ss_pred             ccccceEEEEecCCccchHHHHHHHhcc-CceEEEeccc
Confidence            3457999999999999999999999999 9999987643

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=93.71  E-value=0.042  Score=41.19  Aligned_cols=37  Identities=19%  Similarity=0.091  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|+|.|+ |.+|...+..+...|..+|++++++.
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~   63 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK   63 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH
Confidence            34679999998 55899999999999856788887754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.71  E-value=0.031  Score=40.74  Aligned_cols=33  Identities=33%  Similarity=0.515  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      .+++|||+|| |.+|..-++.|++.| -+|+++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~G-A~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTG-CKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGT-CEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCC-CEEEEEeC
Confidence            5789999995 899999999999999 89998853

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.68  E-value=0.026  Score=42.54  Aligned_cols=72  Identities=21%  Similarity=0.201  Sum_probs=42.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhc----CCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWI----GHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++|||+| +|..+++++..|.+.  .+|+++.|+..+.. .+...+    .......+..+-.+.....+|.+|++..
T Consensus        17 ~~k~vlIlG-aGG~arai~~aL~~~--~~i~I~nR~~~ka~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp   92 (177)
T d1nvta1          17 KDKNIVIYG-AGGAARAVAFELAKD--NNIIIANRTVEKAE-ALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP   92 (177)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHTSS--SEEEEECSSHHHHH-HHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHccc--cceeeehhhhhHHH-HHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCc
Confidence            578999999 677899999998655  48999999643222 221111    1111111222222223346899998764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.66  E-value=0.06  Score=37.43  Aligned_cols=34  Identities=6%  Similarity=-0.006  Sum_probs=30.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++|+|.| +|++|..++..|.+.| .+|+++.|..
T Consensus        22 ~~~vvVvG-gG~ig~E~A~~l~~~g-~~vt~i~~~~   55 (121)
T d1mo9a2          22 GSTVVVVG-GSKTAVEYGCFFNATG-RRTVMLVRTE   55 (121)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhcc-hhheEeeccc
Confidence            57899988 8999999999999999 9999998854

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.65  E-value=0.056  Score=36.77  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=27.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+|+|+|.| +|.-|..++..|.+.. ..++.+.|.
T Consensus        31 ~gK~VlVVG-~g~Sa~dia~~l~~~a-k~v~~~~~r   64 (107)
T d2gv8a2          31 VGESVLVVG-GASSANDLVRHLTPVA-KHPIYQSLL   64 (107)
T ss_dssp             TTCCEEEEC-SSHHHHHHHHHHTTTS-CSSEEEECT
T ss_pred             CCCeEEEEC-CCCCHHHHHHHHHHhc-CEEEEEEec
Confidence            479999999 7899999999999887 555555443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.56  E-value=0.21  Score=39.46  Aligned_cols=34  Identities=21%  Similarity=0.329  Sum_probs=29.4

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      +.+|+|.| .|.+|++++..|.+.|..++++++..
T Consensus        30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            46999999 77799999999999997688888753

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.49  E-value=0.011  Score=44.47  Aligned_cols=35  Identities=17%  Similarity=0.154  Sum_probs=27.7

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ..+.+|+|+|+ |.+|...++.+...|...|+++++
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~   61 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDI   61 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEES
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeecc
Confidence            34779999997 999999999999999445555554

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.43  E-value=0.054  Score=43.13  Aligned_cols=35  Identities=23%  Similarity=0.172  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+||+|+| .|..|..++..|.++| ++|+++.|..
T Consensus         3 ~~~kV~IiG-aG~aGl~~A~~L~~~G-~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVG-GSISGLTAALMLRDAG-VDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCCcEEEEC-cCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            467999999 8999999999999999 9999998853

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=93.25  E-value=0.038  Score=44.91  Aligned_cols=32  Identities=19%  Similarity=0.450  Sum_probs=29.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|+|+| +|.-|...+..|.++| ++|+++.+.
T Consensus         1 m~V~IIG-aG~aGL~aA~~L~~~G-~~V~vlE~~   32 (347)
T d2ivda1           1 MNVAVVG-GGISGLAVAHHLRSRG-TDAVLLESS   32 (347)
T ss_dssp             CCEEEEC-CBHHHHHHHHHHHTTT-CCEEEECSS
T ss_pred             CeEEEEC-CCHHHHHHHHHHHhCC-CCEEEEecC
Confidence            7899999 5999999999999999 999999874

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.00  E-value=0.062  Score=40.95  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=28.9

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~   67 (346)
                      |||+|+| .|++|.+++..|.+.+. .+|+++.|..
T Consensus         1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            7999999 78999999999998763 5788888753

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.94  E-value=0.075  Score=38.79  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=29.5

Q ss_pred             CCCEEEEE-cCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVT-GGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilIt-G~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..++++|. .|.||+|.++++.|.+.| ++|+++.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G-~~Vtlv~~~   73 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAG-HEVTIVSGV   73 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTT-CEEEEEESS
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcC-CeEEEEecC
Confidence            35667766 357999999999999999 999999874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.93  E-value=0.047  Score=40.80  Aligned_cols=35  Identities=20%  Similarity=0.129  Sum_probs=26.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ..+.+|||.|+ |.+|...++.+...|...|+++++
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~   61 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDI   61 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECS
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcc
Confidence            34679999998 568999999999999445555554

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=92.92  E-value=0.12  Score=38.07  Aligned_cols=68  Identities=18%  Similarity=0.161  Sum_probs=35.7

Q ss_pred             CEEEEEcCchhHHHH-HHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~-l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      |||.|+| .|.+|+. .+..|.+.+..++.+++++. .......+...   +..+..|+.+....++|+|+-+.
T Consensus         2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~-~~~~~~~~~~~---~~~~~~~~~~ll~~~iD~V~I~t   70 (167)
T d1xeaa1           2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNP-KVLGTLATRYR---VSATCTDYRDVLQYGVDAVMIHA   70 (167)
T ss_dssp             EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCH-HHHHHHHHHTT---CCCCCSSTTGGGGGCCSEEEECS
T ss_pred             eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCH-HHHHHHHHhcc---cccccccHHHhcccccceecccc
Confidence            6899999 6777865 55666555535666555432 22222222222   22222343332223689988644

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.80  E-value=0.14  Score=38.38  Aligned_cols=72  Identities=15%  Similarity=0.071  Sum_probs=40.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a  105 (346)
                      +||.|+| .|.+|+..++.|...+..+|+++.-....+.....+....+...-+..|+.+. +..++|+|+-+.
T Consensus         2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECC
T ss_pred             eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecc
Confidence            6899999 68899999999988754677765432212222222222221111122333322 234689998643

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.64  E-value=0.15  Score=37.79  Aligned_cols=115  Identities=10%  Similarity=0.011  Sum_probs=59.7

Q ss_pred             CCEEEEEcC-chhHHHHHHHHHHhcCC---CeEEEEeCCCCCCcchhhhh-----cC--CCCeeEEecccCCcccCCCCE
Q 019060           32 NMRILVTGG-AGFIGSHLVDKLMENEK---NEVIVVDNYFTGSKDNLRKW-----IG--HPRFELIRHDVTEPLLIEVDQ  100 (346)
Q Consensus        32 ~~~ilItG~-tG~iG~~l~~~L~~~g~---~~V~~~~r~~~~~~~~~~~~-----~~--~~~~~~~~~d~~~~~~~~~d~  100 (346)
                      .|||.|+|| +.+.+..++..+.....   .++..++.+...........     ..  ....+.....-......+.|+
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv   80 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF   80 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence            479999996 44555666665555431   37778876432111111111     10  122333222211223457999


Q ss_pred             EEEcccCCCcccccc----------------Ch--HHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Q 019060          101 IYHLACPASPIFYKY----------------NP--VKTIKTNVIGTLNMLGLAKRVGA--RILLTS  146 (346)
Q Consensus       101 vi~~a~~~~~~~~~~----------------~~--~~~~~~n~~~~~~l~~~~~~~~~--r~i~~S  146 (346)
                      ||.+|+.........                .+  ......|+...+.+++..++...  .+|.+|
T Consensus        81 Vv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          81 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence            999997543211000                00  12234677778888888888765  455444

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.63  E-value=0.35  Score=41.52  Aligned_cols=34  Identities=26%  Similarity=0.433  Sum_probs=29.1

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      +.||||+|+ |.+|.++++.|...|...+++++..
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            568999996 5599999999999996688888764

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.54  E-value=0.083  Score=39.17  Aligned_cols=35  Identities=17%  Similarity=0.273  Sum_probs=29.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~   67 (346)
                      ++||+|+| .|++|..++..|.+.+. .+|+++.+..
T Consensus         2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            68999999 89999999999999883 3788887653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.53  E-value=0.066  Score=38.86  Aligned_cols=34  Identities=21%  Similarity=0.336  Sum_probs=27.3

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r   65 (346)
                      |++|.|.|+||-||....+-+.++.. ++|.++.-
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            45799999999999999998877652 57776653

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=92.33  E-value=0.12  Score=38.31  Aligned_cols=36  Identities=22%  Similarity=0.200  Sum_probs=28.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|+|.|+ |.+|...++.+...|...|++++++
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~   66 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVK   66 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccch
Confidence            34678999885 9999999999988884566676664

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.32  E-value=0.072  Score=40.27  Aligned_cols=34  Identities=15%  Similarity=0.161  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCC-eEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKN-EVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~-~V~~~~r~~   67 (346)
                      .+||+|+| .|..|...+..|.+.| + +|+++.|..
T Consensus         4 ~~kVaIIG-aGpaGl~aA~~l~~~G-~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLG-AGPASISCASFLARLG-YSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEEC-CSHHHHHHHHHHHHTT-CCCEEEEESSS
T ss_pred             CCEEEEEC-ChHHHHHHHHHHHHCC-CCeEEEEEecC
Confidence            47999999 8999999999999999 7 599998753

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.07  E-value=0.097  Score=40.17  Aligned_cols=72  Identities=14%  Similarity=0.213  Sum_probs=42.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCC-----cchhhhhcCCCCeeEEe-cccCCcc------cCCCCE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGS-----KDNLRKWIGHPRFELIR-HDVTEPL------LIEVDQ  100 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~-~d~~~~~------~~~~d~  100 (346)
                      |||++.| ++-.|..+++.|+++| ++|.++....+..     ...+..+....++.++. .++.+..      ..++|.
T Consensus         1 Mkiv~~~-~~~~g~~~l~~L~~~g-~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dl   78 (203)
T d2blna2           1 MKTVVFA-YHDMGCLGIEALLAAG-YEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDV   78 (203)
T ss_dssp             CEEEEEE-CHHHHHHHHHHHHHTT-CEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSE
T ss_pred             CeEEEEe-cCHHHHHHHHHHHHCC-CCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccc
Confidence            7999997 5568999999999999 8986554221111     11222222223455544 2333332      236899


Q ss_pred             EEEccc
Q 019060          101 IYHLAC  106 (346)
Q Consensus       101 vi~~a~  106 (346)
                      +|....
T Consensus        79 ii~~g~   84 (203)
T d2blna2          79 IFSFYY   84 (203)
T ss_dssp             EEEESC
T ss_pred             eeeeec
Confidence            887653

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.90  E-value=0.16  Score=38.82  Aligned_cols=30  Identities=30%  Similarity=0.425  Sum_probs=26.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      |||++.| ++..|..+.+.|+++| ++|.++.
T Consensus         1 MkI~~~G-~~~~~~~~l~~L~~~~-~~i~~V~   30 (203)
T d2bw0a2           1 MKIAVIG-QSLFGQEVYCHLRKEG-HEVVGVF   30 (203)
T ss_dssp             CEEEEEC-CHHHHHHHHHHHHHTT-CEEEEEE
T ss_pred             CEEEEEc-CCHHHHHHHHHHHHCC-CcEEEEE
Confidence            7999998 7788999999999999 8887554

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.87  E-value=0.081  Score=42.44  Aligned_cols=31  Identities=23%  Similarity=0.378  Sum_probs=28.7

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      |+|+| .|.+|..++.+|.++| ++|+++.+..
T Consensus         7 vvIIG-aGi~Gls~A~~La~~G-~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIG-GGIIGSAIAYYLAKEN-KNTALFESGT   37 (276)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence            99998 8999999999999999 9999998853

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.84  E-value=0.32  Score=36.78  Aligned_cols=36  Identities=17%  Similarity=0.270  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      .+++|.|.| .|-||+.+++.|..-| .+|.+.++...
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   83 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFG-FNVLFYDPYLS   83 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECTTSC
T ss_pred             eCceEEEec-cccccccceeeeeccc-cceeeccCccc
Confidence            468999998 9999999999999888 99999988643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.52  E-value=0.11  Score=42.21  Aligned_cols=33  Identities=30%  Similarity=0.292  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .|||+|+| +|.-|..-+.+|.+.| ++|+++.+.
T Consensus         1 ~KkV~IIG-aG~aGL~aA~~La~~G-~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIG-AGVSGLAAAYKLKIHG-LNVTVFEAE   33 (373)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHTTS-CEEEEECSS
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHhCC-CCEEEEeCC
Confidence            47999998 8999999999999999 999999864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.48  E-value=0.17  Score=37.00  Aligned_cols=69  Identities=14%  Similarity=0.119  Sum_probs=45.2

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ..-.+|+++|+| .|.+|+.+++.|...| .+|.++...+   ...++...  .++.....   +......|+||-+.|
T Consensus        20 ~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G-~~V~v~e~dp---~~al~A~~--dG~~v~~~---~~a~~~adivvtaTG   88 (163)
T d1li4a1          20 VMIAGKVAVVAG-YGDVGKGCAQALRGFG-ARVIITEIDP---INALQAAM--EGYEVTTM---DEACQEGNIFVTTTG   88 (163)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH---HHHHHHHH--TTCEECCH---HHHTTTCSEEEECSS
T ss_pred             ceecCCEEEEec-cccccHHHHHHHHhCC-CeeEeeeccc---chhHHhhc--CceEeeeh---hhhhhhccEEEecCC
Confidence            344578999998 9999999999999999 9999998632   12222222  13333222   223345788887665

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.14  E-value=0.38  Score=36.46  Aligned_cols=34  Identities=24%  Similarity=0.328  Sum_probs=30.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +++|.|.| .|-||+.+++.|..-| .+|.++++..
T Consensus        43 gk~vgIiG-~G~IG~~va~~l~~fg-~~V~~~d~~~   76 (197)
T d1j4aa1          43 DQVVGVVG-TGHIGQVFMQIMEGFG-AKVITYDIFR   76 (197)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             CCeEEEec-ccccchhHHHhHhhhc-ccccccCccc
Confidence            68999999 9999999999999889 9999998753

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.10  E-value=0.51  Score=35.40  Aligned_cols=35  Identities=20%  Similarity=0.074  Sum_probs=31.1

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|.|.| .|.||+.+++.|..-| .+|...++..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg-~~v~~~d~~~   77 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLG-MYVYFYDIEN   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             cceEEEEee-cccchhhhhhhccccc-ceEeeccccc
Confidence            468999997 9999999999999888 9999998754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=91.09  E-value=0.13  Score=39.34  Aligned_cols=67  Identities=18%  Similarity=0.267  Sum_probs=44.7

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++|+|-| -|-+|+++++.|.+.| .+|++.+...    ..+..... .+.+.+.  ..+.-..++|+++=||.
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~G-akvvv~d~d~----~~~~~~~~-~g~~~~~--~~~~~~~~~DI~iPcA~   92 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAG-AQLLVADTDT----ERVAHAVA-LGHTAVA--LEDVLSTPCDVFAPCAM   92 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSCH----HHHHHHHH-TTCEECC--GGGGGGCCCSEEEECSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEEecchH----HHHHHHHh-hcccccC--ccccccccceeeecccc
Confidence            468999998 9999999999999999 9998887532    22222111 1233322  22333457999998873

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.09  E-value=0.2  Score=39.04  Aligned_cols=69  Identities=16%  Similarity=0.178  Sum_probs=46.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      ..+++|+|-| -|-+|+++++.|.+.| .+|++.+.+    ...+.......+...+  +..+.-..++|+++=||.
T Consensus        37 l~g~~v~IqG-~GnVG~~~a~~L~~~G-akvv~~d~~----~~~~~~~~~~~g~~~~--~~~~~~~~~cDIl~PcA~  105 (230)
T d1leha1          37 LEGLAVSVQG-LGNVAKALCKKLNTEG-AKLVVTDVN----KAAVSAAVAEEGADAV--APNAIYGVTCDIFAPCAL  105 (230)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSC----HHHHHHHHHHHCCEEC--CGGGTTTCCCSEEEECSC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCC-CEEEeeccc----HHHHHHHHHhcCCccc--CCcccccccccEeccccc
Confidence            3578999998 9999999999999999 999888653    2222222222223332  222333457999999884

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=91.08  E-value=0.076  Score=37.39  Aligned_cols=64  Identities=13%  Similarity=0.061  Sum_probs=44.1

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccC------CCCEEEEcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLI------EVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~------~~d~vi~~a  105 (346)
                      +.|+|+| -|-+|+.+++.|.  + +.|.++.....    .... ....++.++.+|.++++.+      +++.++-+.
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~-~~i~vi~~d~~----~~~~-~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~   70 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--G-SEVFVLAEDEN----VRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL   70 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--G-GGEEEEESCTT----HHHH-HHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--C-CCCEEEEcchH----HHHH-HHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence            3578888 5888999999984  5 56777765332    1122 1235789999999987543      588888654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.85  E-value=0.51  Score=34.36  Aligned_cols=33  Identities=21%  Similarity=0.149  Sum_probs=22.9

Q ss_pred             CCEEEEEcCchhHHHH-HHHHHHhcCCCeEEEEeC
Q 019060           32 NMRILVTGGAGFIGSH-LVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~-l~~~L~~~g~~~V~~~~r   65 (346)
                      .|||.|+| +|.+|+. .+..|...+..+++++..
T Consensus         1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d   34 (164)
T d1tlta1           1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWS   34 (164)
T ss_dssp             CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEEC
T ss_pred             CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            36899999 6899975 566666654367765543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.85  E-value=0.12  Score=38.43  Aligned_cols=33  Identities=18%  Similarity=0.191  Sum_probs=27.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      .+++|+|+| +|++|-+++..|.+.| .+|.++.+
T Consensus         2 ~~~~VvIIG-gG~~G~e~A~~l~~~g-~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVG-TGLAGVEVAFGLRASG-WEGNIRLV   34 (185)
T ss_dssp             CSCEEEEEC-CSHHHHHHHHHHHHTT-CCSEEEEE
T ss_pred             CCCCEEEEC-CcHHHHHHHHHHHHcC-CceEEEEe
Confidence            367899998 8999999999999999 77665544

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.82  E-value=0.43  Score=36.20  Aligned_cols=34  Identities=26%  Similarity=0.342  Sum_probs=30.9

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +++|.|.| .|-||+.+++.|..-| .+|+++++..
T Consensus        45 ~ktvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~   78 (199)
T d1dxya1          45 QQTVGVMG-TGHIGQVAIKLFKGFG-AKVIAYDPYP   78 (199)
T ss_dssp             GSEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSC
T ss_pred             ceeeeeee-cccccccccccccccc-eeeeccCCcc
Confidence            68999998 9999999999999989 9999998854

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.69  E-value=0.21  Score=36.58  Aligned_cols=35  Identities=17%  Similarity=0.138  Sum_probs=30.4

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|+|.|+ |.+|...++.+...| .+|++++++
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G-~~Vi~~~~~   60 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMG-LHVAAIDID   60 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTT-CEEEEEESC
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcC-Cccceecch
Confidence            34789999986 899999999999999 899999874

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.50  E-value=0.022  Score=44.90  Aligned_cols=27  Identities=37%  Similarity=0.532  Sum_probs=24.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEE
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVI   61 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~   61 (346)
                      |||+|+| .|.+|...+.+|.++| ++|+
T Consensus         1 mkV~VIG-aGi~GlstA~~L~~~G-~~v~   27 (246)
T d1kifa1           1 MRVVVIG-AGVIGLSTALCIHERY-HSVL   27 (246)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHH-TTTS
T ss_pred             CEEEEEC-chHHHHHHHHHHHHCC-CCce
Confidence            7999999 8999999999999999 6543

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.36  E-value=0.21  Score=32.41  Aligned_cols=30  Identities=17%  Similarity=0.138  Sum_probs=26.2

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEe
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVD   64 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~   64 (346)
                      |||||+| +|.=-.+|+..|.++. +++++.-
T Consensus         1 MkVLviG-sGgREHAia~~l~~s~-~~v~~~p   30 (90)
T d1vkza2           1 VRVHILG-SGGREHAIGWAFAKQG-YEVHFYP   30 (90)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHTT-CEEEEEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHhcCC-CeEEEec
Confidence            8999999 7777999999999988 8888763

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.34  E-value=0.14  Score=41.97  Aligned_cols=33  Identities=21%  Similarity=0.347  Sum_probs=30.2

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      -++|+|+| +|..|...+..|.++| ++|+++.+.
T Consensus        30 pkkV~IIG-aG~aGLsaA~~L~~~G-~~V~vlE~~   62 (370)
T d2iida1          30 PKHVVIVG-AGMAGLSAAYVLAGAG-HQVTVLEAS   62 (370)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHHT-CEEEEECSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHHHCC-CCEEEEeCC
Confidence            36999999 8999999999999999 999999864

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=90.28  E-value=0.11  Score=37.57  Aligned_cols=33  Identities=27%  Similarity=0.393  Sum_probs=26.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDN   65 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r   65 (346)
                      ++|.|.|+||-||....+-+.+... ++|.++.-
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa   36 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTA   36 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEe
Confidence            6899999999999999998877642 66766643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.15  E-value=0.24  Score=38.61  Aligned_cols=35  Identities=31%  Similarity=0.358  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|+| .|..|...+..|.+.| ++|+++.+..
T Consensus        48 ~~k~VvIIG-aGpAGl~aA~~l~~~G-~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVG-AGPSGSEAARVLMESG-YTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEEC-CSHHHHHHHHHHHHTT-CEEEEECSSS
T ss_pred             CCceEEEEc-ccHHHHHHHHHHHHhc-cceeeEeecc
Confidence            468999999 8999999999999999 9999998743

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.06  E-value=0.13  Score=41.95  Aligned_cols=33  Identities=18%  Similarity=0.452  Sum_probs=29.4

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..|+|+| +|.-|..+|++|.+.| ++|.++.++.
T Consensus         2 ~dv~IIG-aG~sGl~~A~~L~~~g-~~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVG-SGLFGAVCANELKKLN-KKVLVIEKRN   34 (298)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHGGGT-CCEEEECSSS
T ss_pred             ccEEEEC-CcHHHHHHHHHHHhCC-CcEEEEECCC
Confidence            4689999 8999999999999999 9999997643

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.90  E-value=0.16  Score=39.61  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -|+|+| +|.-|...+..|.++| ++|.++.+..
T Consensus         7 DviViG-aG~~Gl~~A~~La~~G-~~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLG-TGITECILSGLLSVDG-KKVLHIDKQD   38 (297)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSS
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCC-CCEEEEcCCC
Confidence            378888 9999999999999999 9999998854

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=89.87  E-value=0.81  Score=35.20  Aligned_cols=71  Identities=7%  Similarity=0.076  Sum_probs=36.7

Q ss_pred             CEEEEEcCchhHHH-HHHHHHHhcCCCeEEEE-eCCCCCCcchhhhhcCCCCeeE-EecccCCc-ccCCCCEEEEcc
Q 019060           33 MRILVTGGAGFIGS-HLVDKLMENEKNEVIVV-DNYFTGSKDNLRKWIGHPRFEL-IRHDVTEP-LLIEVDQIYHLA  105 (346)
Q Consensus        33 ~~ilItG~tG~iG~-~l~~~L~~~g~~~V~~~-~r~~~~~~~~~~~~~~~~~~~~-~~~d~~~~-~~~~~d~vi~~a  105 (346)
                      -+|.|+| .|.+|+ ++++.+......+|+++ +|+. .+.....+....+.... ...|+.+. +..++|+|+-+.
T Consensus        34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~-~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~t  108 (221)
T d1h6da1          34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNA-EKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL  108 (221)
T ss_dssp             EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCH-HHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred             EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCH-HHHHHHHHhhccccccccccCchhhhcccccceeeeecc
Confidence            3899999 689996 56666665543677755 4432 22222222222221111 22333332 233689998654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.71  E-value=0.099  Score=38.76  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      -.+++++|+|-|.-+|+.|+..|+++| ..|+....
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~g-aTVt~~~~   61 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDG-ATVYSVDV   61 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTS-CEEEEECS
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCC-CEEEEecc
Confidence            357999999999999999999999999 89887765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=89.68  E-value=0.23  Score=41.10  Aligned_cols=37  Identities=19%  Similarity=0.266  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCC-CeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEK-NEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~-~~V~~~~r~~   67 (346)
                      +..|+|+|+| .|.-|...+..|+++|. ++|+++.|..
T Consensus         2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            3467999999 89999999999998773 6999998864

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.52  E-value=0.1  Score=39.11  Aligned_cols=31  Identities=19%  Similarity=0.348  Sum_probs=25.5

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEE
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVV   63 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~   63 (346)
                      |..+|+|+| +|++|-+++..|.+.| .++.++
T Consensus         2 m~a~VvIIG-gG~~G~e~A~~l~~~g-~~v~i~   32 (183)
T d1d7ya1           2 LKAPVVVLG-AGLASVSFVAELRQAG-YQGLIT   32 (183)
T ss_dssp             CCSSEEEEC-CSHHHHHHHHHHHHHT-CCSCEE
T ss_pred             CCCCEEEEC-ccHHHHHHHHHHHhcC-CceEEE
Confidence            456799999 8999999999999998 554444

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.43  E-value=0.93  Score=33.98  Aligned_cols=36  Identities=19%  Similarity=0.219  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFT   68 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~   68 (346)
                      .++++.|.| .|-||+.+++.|..-| .+|...++...
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg-~~v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFD-MDIDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECSSCC
T ss_pred             cccceEEee-cccchHHHHHHHHhhc-ccccccccccc
Confidence            368999998 9999999999999888 99999987543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=89.33  E-value=0.37  Score=34.10  Aligned_cols=88  Identities=15%  Similarity=0.064  Sum_probs=53.0

Q ss_pred             CCEEEEEcCc---hhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCC
Q 019060           32 NMRILVTGGA---GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        32 ~~~ilItG~t---G~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~  108 (346)
                      -++|.|+|+|   +-.|..+++.|++.| +.+..+.-+..  ....      .+.. ...++.+.. ..+|.++-+..  
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g-~~~~~v~~~~~--~~~i------~g~~-~~~~l~~i~-~~iD~v~v~~p--   79 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQG-YRVLPVNPRFQ--GEEL------FGEE-AVASLLDLK-EPVDILDVFRP--   79 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTT-CEEEEECGGGT--TSEE------TTEE-CBSSGGGCC-SCCSEEEECSC--
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCC-CCceEEEeccc--ccee------ecee-cccchhhcc-CCCceEEEecc--
Confidence            3689999998   679999999999999 99887742110  0000      0111 122222221 24788887651  


Q ss_pred             CccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          109 SPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                                      -.....+++.|.+.+++.+++.+.
T Consensus        80 ----------------~~~v~~~v~~~~~~g~k~i~~q~G  103 (136)
T d1iuka_          80 ----------------PSALMDHLPEVLALRPGLVWLQSG  103 (136)
T ss_dssp             ----------------HHHHTTTHHHHHHHCCSCEEECTT
T ss_pred             ----------------HHHHHHHHHHHHhhCCCeEEEecC
Confidence                            123445666777778876666543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=89.17  E-value=0.78  Score=33.62  Aligned_cols=37  Identities=19%  Similarity=0.111  Sum_probs=27.1

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..+.+|+|+|+.| +|...+..+...+...|++++++.
T Consensus        27 k~g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~   63 (175)
T d1cdoa2          27 EPGSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNP   63 (175)
T ss_dssp             CTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCG
T ss_pred             CCCCEEEEEecCC-ccchHHHHHHHHhhchheeecchH
Confidence            3467999999655 777777777777746788887643

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.09  E-value=0.19  Score=40.79  Aligned_cols=33  Identities=36%  Similarity=0.642  Sum_probs=28.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|+|+| .|.+|..++.+|.++|.++|+++.|..
T Consensus         3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            689999 899999999999999934799998853

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=88.97  E-value=0.23  Score=34.12  Aligned_cols=34  Identities=21%  Similarity=0.325  Sum_probs=26.5

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCC--CeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEK--NEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~--~~V~~~~r~   66 (346)
                      .++++|.| .|++|.+++..|.+.+.  .+|+++.|.
T Consensus        20 p~~v~ivG-gG~ig~E~A~~l~~l~~~~~~Vtli~~~   55 (117)
T d1aoga2          20 PRRVLTVG-GGFISVEFAGIFNAYKPKDGQVTLCYRG   55 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHCCTTCEEEEEESS
T ss_pred             CCeEEEEC-CcHHHHHHHHHhhhcccCCcEEEEEecc
Confidence            36899999 59999999977765541  579888774

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.89  E-value=0.18  Score=40.70  Aligned_cols=33  Identities=18%  Similarity=0.254  Sum_probs=29.5

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -+|+|+| .|..|..++..|.+.| ++|.++.|..
T Consensus         3 ~~V~IvG-aGp~Gl~~A~~L~~~G-~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIG-AGPSGLLLGQLLHKAG-IDNVILERQT   35 (292)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHHT-CCEEEECSSC
T ss_pred             CCEEEEC-cCHHHHHHHHHHHHCC-CCEEEEeCCC
Confidence            3699999 6799999999999999 9999998753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=88.65  E-value=0.18  Score=38.10  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=30.9

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .+++|.|.| .|-||+.+++.|..-| .+|...+|..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg-~~v~~~d~~~   77 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFD-VHLHYTDRHR   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGT-CEEEEECSSC
T ss_pred             cccceeecc-ccccchhhhhhhhccC-ceEEEEeecc
Confidence            367999988 9999999999999888 8999999854

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=88.45  E-value=0.58  Score=32.47  Aligned_cols=92  Identities=14%  Similarity=-0.012  Sum_probs=52.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEcccCCCcc
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLACPASPI  111 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a~~~~~~  111 (346)
                      -+|+|.| .|.+|+.|++.+..+..++++++....+.....   .  -.+++.+..|-... ....++.++.+..     
T Consensus         4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~---~--I~Gi~V~~~~~l~~~~~~~i~iai~~i~-----   72 (126)
T d2dt5a2           4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGR---P--VRGGVIEHVDLLPQRVPGRIEIALLTVP-----   72 (126)
T ss_dssp             EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTC---E--ETTEEEEEGGGHHHHSTTTCCEEEECSC-----
T ss_pred             ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCC---E--ECCEEEecHHHHHHHHhhcccEEEEeCC-----
Confidence            3799999 899999999987654437777665433222111   1  12556554442221 1124566555431     


Q ss_pred             ccccChHHHHHHHHHHHHHHHHHHHHcCCe-EEEEecc
Q 019060          112 FYKYNPVKTIKTNVIGTLNMLGLAKRVGAR-ILLTSTS  148 (346)
Q Consensus       112 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r-~i~~SS~  148 (346)
                                   ......+++.|.+.+++ +.-++..
T Consensus        73 -------------~~~~~~I~d~l~~~gIk~I~~f~~~   97 (126)
T d2dt5a2          73 -------------REAAQKAADLLVAAGIKGILNFAPV   97 (126)
T ss_dssp             -------------HHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             -------------HHHHHHHHHHHHHcCCCEEeecCce
Confidence                         11235688888888985 5555443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.35  E-value=0.25  Score=39.55  Aligned_cols=32  Identities=25%  Similarity=0.411  Sum_probs=28.7

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      -|+|+| .|..|..++.+|.++| ++|+++.+..
T Consensus         5 DvvIIG-aGi~Gls~A~~La~~G-~~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVG-AGSMGMAAGYQLAKQG-VKTLLVDAFD   36 (281)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTT-CCEEEECSSC
T ss_pred             CEEEEC-cCHHHHHHHHHHHHCC-CcEEEEeCCC
Confidence            488888 8999999999999999 9999998743

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.77  E-value=0.82  Score=34.05  Aligned_cols=35  Identities=23%  Similarity=0.322  Sum_probs=30.4

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++++.|+| .|.||+.+++.|..-| .+|.+.++..
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg-~~v~~~d~~~   77 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFG-AYVVAYDPYV   77 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEECTTS
T ss_pred             cceeeeecc-ccchhHHHHHHhhhcc-ceEEeecCCC
Confidence            367888888 8999999999999888 8999998754

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.76  E-value=0.31  Score=35.44  Aligned_cols=31  Identities=29%  Similarity=0.424  Sum_probs=26.2

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ||+|+| .|++|.+++..|. ++ .+|+++.|..
T Consensus         2 rVvIIG-gG~~G~e~A~~l~-~~-~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVG-NGPGGFELAKQLS-QT-YEVTVIDKEP   32 (167)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TT-SEEEEECSSS
T ss_pred             eEEEEC-CcHHHHHHHHHHH-cC-CCEEEEeccc
Confidence            789998 7999999999885 46 7999998743

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.71  E-value=0.42  Score=37.82  Aligned_cols=34  Identities=24%  Similarity=0.321  Sum_probs=29.6

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ++|+|+| .|..|..++..|.+.|.+.|+++.|..
T Consensus         2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            5899999 899999999999999944899998754

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=87.34  E-value=0.48  Score=34.77  Aligned_cols=76  Identities=17%  Similarity=0.234  Sum_probs=38.8

Q ss_pred             CCEEEEEcCchhHHH-HHHHHHHhcCC----CeEEEEeCCCCCCc---chhhhhcC--CCCeeEEecccCCcccCCCCEE
Q 019060           32 NMRILVTGGAGFIGS-HLVDKLMENEK----NEVIVVDNYFTGSK---DNLRKWIG--HPRFELIRHDVTEPLLIEVDQI  101 (346)
Q Consensus        32 ~~~ilItG~tG~iG~-~l~~~L~~~g~----~~V~~~~r~~~~~~---~~~~~~~~--~~~~~~~~~d~~~~~~~~~d~v  101 (346)
                      ..||.|+||.+ +|. .++..|+..-.    .+++.++.......   ..+.....  ....+.....-......+.|+|
T Consensus         3 ~~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~V   81 (167)
T d1u8xx1           3 SFSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV   81 (167)
T ss_dssp             CEEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred             CceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEE
Confidence            56899999854 444 34455554321    37888886432211   00111100  1223333222122334579999


Q ss_pred             EEcccCC
Q 019060          102 YHLACPA  108 (346)
Q Consensus       102 i~~a~~~  108 (346)
                      |.+++..
T Consensus        82 vitag~~   88 (167)
T d1u8xx1          82 MAHIRVG   88 (167)
T ss_dssp             EECCCTT
T ss_pred             EECCCcC
Confidence            9999864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=87.11  E-value=0.15  Score=37.48  Aligned_cols=72  Identities=18%  Similarity=0.284  Sum_probs=46.7

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEeccc--CCcccCCCCEEEEcccCC
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDV--TEPLLIEVDQIYHLACPA  108 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~d~vi~~a~~~  108 (346)
                      -+|+|+| .|-.|..-++.+...| -.|++++.+.. ..+.++..+. ..++....+-  ......+.|+||.++-..
T Consensus        33 a~V~ViG-aGvaG~~A~~~A~~lG-A~V~~~D~~~~-~l~~l~~~~~-~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          33 GKVVILG-GGVVGTEAAKMAVGLG-AQVQIFDINVE-RLSYLETLFG-SRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTT-CEEEEEESCHH-HHHHHHHHHG-GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             cEEEEEC-CChHHHHHHHHHhhCC-CEEEEEeCcHH-HHHHHHHhhc-ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            4899999 8999999999999999 99999997532 1122222222 1233332221  122334799999988543

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.03  E-value=0.51  Score=32.16  Aligned_cols=34  Identities=18%  Similarity=0.175  Sum_probs=27.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc---CCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN---EKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~---g~~~V~~~~r~~   67 (346)
                      -++++|+| .|++|-+++..|.+.   | .+|+++.|..
T Consensus        18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g-~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVG-GGYISIEFAGIFNAYKARG-GQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEEC-SSHHHHHHHHHHHHHSCTT-CEEEEEESSS
T ss_pred             CCeEEEEC-CChHHHHHHHHhHhhcccc-cccceecccc
Confidence            36899999 899999999876554   6 7999998754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.87  E-value=0.46  Score=38.83  Aligned_cols=33  Identities=15%  Similarity=0.318  Sum_probs=29.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..||+|+| +|.-|..-+.+|.++| ++|+++-+.
T Consensus         5 ~~kViVIG-aG~aGL~aA~~L~~~G-~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIG-SGVSGLAAARQLQSFG-MDVTLLEAR   37 (449)
T ss_dssp             CCEEEEEC-CBHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhCC-CCEEEEeCC
Confidence            45899999 8999999999999999 999999654

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.52  E-value=0.47  Score=33.46  Aligned_cols=34  Identities=32%  Similarity=0.312  Sum_probs=27.8

Q ss_pred             CCEEEEEcCchhHHHHHHHHHH----hcCCCeEEEEeCCC
Q 019060           32 NMRILVTGGAGFIGSHLVDKLM----ENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~----~~g~~~V~~~~r~~   67 (346)
                      .++++|.| .|++|..++..|.    +.| .+|+++.+..
T Consensus        37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g-~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIG-GGFLGSELACALGRKARALG-TEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHHHHHT-CEEEEECSSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHHHHhcC-CEEEEecccc
Confidence            57899998 6999999999885    357 8999987753

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.27  E-value=0.2  Score=36.48  Aligned_cols=31  Identities=19%  Similarity=0.354  Sum_probs=25.9

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ||.++| .|.+|..+++.|++.| +.+ +.+|..
T Consensus         2 kIg~IG-lG~MG~~ma~~L~~~g-~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIG-LGAMGYPMAGHLARRF-PTL-VWNRTF   32 (156)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHTTS-CEE-EECSST
T ss_pred             eEEEEe-HHHHHHHHHHHHHhCC-CEE-EEeCCH
Confidence            688888 7999999999999988 765 566654

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=86.14  E-value=0.31  Score=41.46  Aligned_cols=32  Identities=25%  Similarity=0.377  Sum_probs=24.5

Q ss_pred             CEEEEEc---------CchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           33 MRILVTG---------GAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        33 ~~ilItG---------~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ||||+++         |-|-.-.+|++.|.+.| |+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~G-h~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLG-HEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTT-CEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcC-CEEEEEec
Confidence            7888855         44444477899999999 99998863

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=86.10  E-value=0.11  Score=37.62  Aligned_cols=61  Identities=11%  Similarity=0.121  Sum_probs=29.6

Q ss_pred             EEEcCchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcc
Q 019060           36 LVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLA  105 (346)
Q Consensus        36 lItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a  105 (346)
                      -++| +|-+|+++++.|.+.+ +.+.+.+|+.. +.+.+.+...   ..  ..+. .....+.|+||.+.
T Consensus         3 gfIG-~G~mg~~l~~~L~~~~-~~~~v~~R~~~-~~~~l~~~~~---~~--~~~~-~~~~~~~DiVil~v   63 (153)
T d2i76a2           3 NFVG-TGTLTRFFLECLKDRY-EIGYILSRSID-RARNLAEVYG---GK--AATL-EKHPELNGVVFVIV   63 (153)
T ss_dssp             EEES-CCHHHHHHHHTTC-----CCCEECSSHH-HHHHHHHHTC---CC--CCSS-CCCCC---CEEECS
T ss_pred             EEEe-CcHHHHHHHHHHHhCC-CEEEEEeCChh-hhcchhhccc---cc--ccch-hhhhccCcEEEEec
Confidence            3455 9999999999875543 55567787532 2222222222   11  1121 12234589998765

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.95  E-value=0.39  Score=37.58  Aligned_cols=33  Identities=24%  Similarity=0.484  Sum_probs=28.6

Q ss_pred             EEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           34 RILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        34 ~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      +|+|+| +|.-|...+..|.++|.++|+++.+..
T Consensus         2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            689999 899999999999999944799998753

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=85.87  E-value=0.55  Score=34.07  Aligned_cols=37  Identities=16%  Similarity=0.248  Sum_probs=31.9

Q ss_pred             ccCCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           28 FFQSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        28 ~~~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+-.+|+++|.| -|++|+.+++.|...| -.|+++...
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~G-a~V~V~E~D   55 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGLG-ARVYITEID   55 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHHT-CEEEEECSC
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhCC-CEEEEEecC
Confidence            344578999998 9999999999999999 999998763

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=85.05  E-value=0.21  Score=37.89  Aligned_cols=36  Identities=22%  Similarity=0.154  Sum_probs=28.6

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      ..+.+|||+|+ |-+|...++.+...|..+|++++++
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~   59 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLN   59 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeeccc
Confidence            34789999985 9999988888877884578887764

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=84.78  E-value=0.43  Score=39.77  Aligned_cols=30  Identities=17%  Similarity=0.221  Sum_probs=27.6

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|+| +|+-|..++.+|.+.| ++|.++-+-
T Consensus         5 VIVVG-sG~aG~v~A~rLaeaG-~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIG-TGYGAAVSALRLGEAG-VQTLMLEMG   34 (367)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred             EEEeC-cCHHHHHHHHHHHHCc-CeEEEEecC
Confidence            78888 9999999999999999 999999874

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=84.57  E-value=1.2  Score=32.94  Aligned_cols=70  Identities=16%  Similarity=0.153  Sum_probs=37.0

Q ss_pred             CCEEEEEcCchhHHHH-HHHHHHhcCC-CeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCc-ccCCCCEEEEcc
Q 019060           32 NMRILVTGGAGFIGSH-LVDKLMENEK-NEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEP-LLIEVDQIYHLA  105 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~-l~~~L~~~g~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~d~vi~~a  105 (346)
                      .+||.|+| +|.+|+. .+..|.+.+. .+++++............+...   ...+..|+.+. +..++|+|+-+.
T Consensus         3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~---~~~~~~~~~ell~~~~id~v~I~t   75 (181)
T d1zh8a1           3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG---NPAVFDSYEELLESGLVDAVDLTL   75 (181)
T ss_dssp             CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS---SCEEESCHHHHHHSSCCSEEEECC
T ss_pred             CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccc---ccceeeeeeccccccccceeeccc
Confidence            46899999 7899987 4666665442 3666554322222222222222   22233343332 234689998654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.39  E-value=0.69  Score=33.60  Aligned_cols=34  Identities=21%  Similarity=0.122  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      .+.+|||.|+ |-+|...++.+...| .+|++++++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g-~~v~~~~~~   60 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMG-LNVVAVDIG   60 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTT-CEEEEECSC
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCC-CeEeccCCC
Confidence            4679999875 889999999999988 899888764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.61  E-value=0.6  Score=38.18  Aligned_cols=32  Identities=25%  Similarity=0.446  Sum_probs=23.5

Q ss_pred             CEEEEEc-Cc-hhH--HHHHHHHHHhcCCCeEEEEeC
Q 019060           33 MRILVTG-GA-GFI--GSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        33 ~~ilItG-~t-G~i--G~~l~~~L~~~g~~~V~~~~r   65 (346)
                      |||||++ || |.+  +.+|+++|.++| |+|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G-~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQG-WQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTT-CEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCC-CEEEEEEe
Confidence            5788776 44 443  345889999999 99988764

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.94  E-value=1.2  Score=31.97  Aligned_cols=36  Identities=17%  Similarity=0.072  Sum_probs=30.2

Q ss_pred             CCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           31 SNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        31 ~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      ..++|+|+| .|.+|...+..+++.|...|+++.|..
T Consensus        44 ~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            357899998 899999999999999856788887753

>d1m3sa_ c.80.1.3 (A:) Hypothetical protein YckF {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: SIS domain
superfamily: SIS domain
family: mono-SIS domain
domain: Hypothetical protein YckF
species: Bacillus subtilis [TaxId: 1423]

Probab=82.69  E-value=3.9  Score=30.06  Aligned_cols=77  Identities=16%  Similarity=0.209  Sum_probs=49.6

Q ss_pred             CCEEEEEc--CchhHHHHHHHHHHhcCCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEcccCCC
Q 019060           32 NMRILVTG--GAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPAS  109 (346)
Q Consensus        32 ~~~ilItG--~tG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~~~~  109 (346)
                      .++|.++|  .++.++..+..+|..-| ..+..+.                        |+......+-|++|-..... 
T Consensus        37 a~~I~i~G~G~S~~~a~~~~~~l~~lg-~~~~~~~------------------------d~~~~~~~~~Dl~I~iS~sG-   90 (186)
T d1m3sa_          37 SHQIFTAGAGRSGLMAKSFAMRLMHMG-FNAHIVG------------------------EILTPPLAEGDLVIIGSGSG-   90 (186)
T ss_dssp             CSCEEEECSHHHHHHHHHHHHHHHHTT-CCEEETT------------------------STTCCCCCTTCEEEEECSSS-
T ss_pred             CCeEEEEECcHHHHHHHHHHHHHHhcc-CCCCcCC------------------------hhhcccCCCCCEEEEecCcc-
Confidence            46888887  58889999999999999 6665531                        11111122346666543211 


Q ss_pred             ccccccChHHHHHHHHHHHHHHHHHHHHcCCeEEEEecc
Q 019060          110 PIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTS  148 (346)
Q Consensus       110 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~i~~SS~  148 (346)
                           .         ...+..+++.+++.|+++|.+++.
T Consensus        91 -----~---------t~~~i~~~~~ak~~g~~iI~IT~~  115 (186)
T d1m3sa_          91 -----E---------TKSLIHTAAKAKSLHGIVAALTIN  115 (186)
T ss_dssp             -----C---------CHHHHHHHHHHHHTTCEEEEEESC
T ss_pred             -----c---------hhhhHHHHHHHHHCCCCEEEEecC
Confidence                 1         123557888899999998888763

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.14  E-value=0.71  Score=37.74  Aligned_cols=30  Identities=23%  Similarity=0.430  Sum_probs=27.5

Q ss_pred             EEEEcCchhHHHHHHHHHHhcCCCeEEEEeCC
Q 019060           35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNY   66 (346)
Q Consensus        35 ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r~   66 (346)
                      |+|+| +|.-|...+..|.++| ++|+++.+.
T Consensus         2 ViVIG-aG~aGL~aA~~L~~~G-~~V~VlE~~   31 (383)
T d2v5za1           2 VVVVG-GGISGMAAAKLLHDSG-LNVVVLEAR   31 (383)
T ss_dssp             EEEEC-CBHHHHHHHHHHHHTT-CCEEEEESS
T ss_pred             EEEEC-CCHHHHHHHHHHHhCC-CCEEEEecC
Confidence            78888 8999999999999999 999999864

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=81.80  E-value=7.9  Score=28.63  Aligned_cols=91  Identities=18%  Similarity=0.247  Sum_probs=55.3

Q ss_pred             CEEEEEcCchhHHHHHHHHHHhcCCCeE--EEEeCCCCCCcchhhhhcCCCCeeEEec-ccCC-----------------
Q 019060           33 MRILVTGGAGFIGSHLVDKLMENEKNEV--IVVDNYFTGSKDNLRKWIGHPRFELIRH-DVTE-----------------   92 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~L~~~g~~~V--~~~~r~~~~~~~~~~~~~~~~~~~~~~~-d~~~-----------------   92 (346)
                      |||.|+| -|.-|..++.+|.+.+...|  ++++.    ..+.+....  ...++.-+ +++.                 
T Consensus         1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainT----D~~~L~~~~--a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e   73 (194)
T d1w5fa1           1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNT----DLQVLEASN--ADVKIQIGENITRGLGAGGRPEIGEQAALE   73 (194)
T ss_dssp             CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEES----CHHHHHTCC--CSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred             CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcC----CHHHHhcCC--cceEEecccccCCCcccccCchhhHhHHHH
Confidence            5889998 88899999999999885434  44432    112222111  11222221 1111                 


Q ss_pred             ------cccCCCCEEEEcccCCCccccccChHHHHHHHHHHHHHHHHHHHHcCCeE
Q 019060           93 ------PLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARI  142 (346)
Q Consensus        93 ------~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~r~  142 (346)
                            ....+.|.||-+||...            .....++.-+.+.|++.++-+
T Consensus        74 ~~~~I~~~l~~~d~vfi~AGlGG------------gTGtgaapviA~~ake~g~lv  117 (194)
T d1w5fa1          74 SEEKIREVLQDTHMVFITAGFGG------------GTGTGASPVIAKIAKEMGILT  117 (194)
T ss_dssp             THHHHHHHTTTCSEEEEEEETTS------------SHHHHHHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHHhcCCCeEEEEEecCC------------CcccchHHHHHHHHHHcCCce
Confidence                  01226999999999876            234556777889999998743

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.31  E-value=0.79  Score=33.35  Aligned_cols=74  Identities=23%  Similarity=0.275  Sum_probs=39.1

Q ss_pred             CEEEEEcCchhHHHHHHHH-HHhcC----CCeEEEEeCCCCCCcchhhhh---cCCCCeeEEecccCCcccCCCCEEEEc
Q 019060           33 MRILVTGGAGFIGSHLVDK-LMENE----KNEVIVVDNYFTGSKDNLRKW---IGHPRFELIRHDVTEPLLIEVDQIYHL  104 (346)
Q Consensus        33 ~~ilItG~tG~iG~~l~~~-L~~~g----~~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~d~vi~~  104 (346)
                      |||.|+||. -+|...+-. |+..-    ..++..++.+.... ......   ......+.....-...+..+.|+||..
T Consensus         1 mKIaiIGaG-s~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~-~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVit   78 (162)
T d1up7a1           1 MRIAVIGGG-SSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQ-KIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQ   78 (162)
T ss_dssp             CEEEEETTT-CTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHH-HHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEEC
T ss_pred             CEEEEECCC-HHHHHHHHHHHHhcccccCccEEEEEecCcHHH-HHHHHHHHhhhccCceEEEecCcccccCCCCEEEEe
Confidence            799999974 456555533 32221    15899998754221 111111   111233333322223345689999999


Q ss_pred             ccCC
Q 019060          105 ACPA  108 (346)
Q Consensus       105 a~~~  108 (346)
                      |+..
T Consensus        79 a~~~   82 (162)
T d1up7a1          79 FRPG   82 (162)
T ss_dssp             CCTT
T ss_pred             cccC
Confidence            9753

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=80.97  E-value=0.96  Score=37.28  Aligned_cols=74  Identities=11%  Similarity=0.107  Sum_probs=51.7

Q ss_pred             CCEEEEEcCchhHHHHHHHHHHhc-CCCeEEEEeCCCCCCcchhhhhcCCCCeeEEecccCCcccCCCCEEEEccc
Q 019060           32 NMRILVTGGAGFIGSHLVDKLMEN-EKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLAC  106 (346)
Q Consensus        32 ~~~ilItG~tG~iG~~l~~~L~~~-g~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~vi~~a~  106 (346)
                      .+++.|+| +|.++..-++.+... +..+|++.+|+.........+.....++++..++-......+.|+|+-+.+
T Consensus       128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA  202 (340)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred             CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence            46899998 889999888877664 337899999864333333333333457888888776666778999986553

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.91  E-value=1.6  Score=30.06  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=29.9

Q ss_pred             CCEEEEEcC----------chhHHHHHHHHHHhcCCCeEEEEeCCC
Q 019060           32 NMRILVTGG----------AGFIGSHLVDKLMENEKNEVIVVDNYF   67 (346)
Q Consensus        32 ~~~ilItG~----------tG~iG~~l~~~L~~~g~~~V~~~~r~~   67 (346)
                      .++|||+|+          --|-+.+.++.|.+.| ++++.++-+.
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g-~~~iliN~NP   51 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEG-YRVINVNSNP   51 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHT-CEEEEECSCT
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcC-CeEEEecCch
Confidence            579999998          4588999999999999 9988887643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=80.17  E-value=1.1  Score=34.87  Aligned_cols=34  Identities=21%  Similarity=0.270  Sum_probs=29.9

Q ss_pred             CCCCEEEEEcCchhHHHHHHHHHHhcCCCeEEEEeC
Q 019060           30 QSNMRILVTGGAGFIGSHLVDKLMENEKNEVIVVDN   65 (346)
Q Consensus        30 ~~~~~ilItG~tG~iG~~l~~~L~~~g~~~V~~~~r   65 (346)
                      ..+++|+|-| -|-+|+++++.|.+.| .+|++++.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~G-akvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMG-AKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTT-CEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcC-CeEEEeec
Confidence            3578999998 9999999999999999 88887764