Citrus Sinensis ID: 019064

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340------
Protein Sequence
MGDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSFSALA
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHcHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHccccccccHHHHHccccHHHcccccccccccccEEHccEEEEEcccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
mgdkvagikqkggfraCTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYskslhppdcgkssclKGAIAAYFYGSLYLYslgcggnrgtlpalgagqfdendpkGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAigkpfyriqqpgesplvRVAQVIVVAIKnrklslpdnpeelyeinkiervgteeriphtnqfrcldkaaivpkdstaaapwrvctVTQVEEVKILARMMPILASTIIMNTCLAQlqtlsdtpqeshsfsala
Flexible Loop (DISEMBL)
mgdkvagikqkggfraCTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIknrklslpdnpeelYEINKiervgteeriphtnqfrcldkaaivpkdstaaapwrvctvTQVEEVKILARMMPILASTIIMNTCLAQLQTlsdtpqeshsfsala
Low Complexity Region (SEG)
MGDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAyfygslylyslgcggNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSFSALA
Disordered region (IsUnstruct)
*******IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE***KGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQ****************
Disordered Region (DISOPRED)
************GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPP*********GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE******KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELY******************QFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQ*********
Disordered Region (DISEMBL)
********KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQT***************
Disordered Region (DISPRO)
*****A***QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQES*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSFSALA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	346	2.2.26 [Sep-21-2011]
Q93VV5	591	Probable peptide/nitrate	yes	no	0.939	0.549	0.418	2e-67
Q8VYE4	567	Probable peptide/nitrate	no	no	0.936	0.571	0.380	9e-57
Q05085	590	Nitrate transporter 1.1 O	no	no	0.971	0.569	0.358	3e-55
Q56XQ6	601	Probable peptide/nitrate	no	no	0.919	0.529	0.404	4e-55
Q8H157	585	Nitrate transporter 1.2 O	no	no	0.945	0.558	0.366	2e-54
Q9M390	570	Peptide transporter PTR1	no	no	0.945	0.573	0.321	1e-53
Q93Z20	590	Probable peptide/nitrate	no	no	0.927	0.544	0.338	2e-53
P46032	585	Peptide transporter PTR2	no	no	0.936	0.553	0.320	5e-53
Q9LYR6	624	Probable peptide/nitrate	no	no	0.959	0.532	0.357	2e-52
Q9LFB8	570	Peptide transporter PTR5	no	no	0.947	0.575	0.322	2e-50

>sp|Q93VV5|PTR16_ARATH Probable peptide/nitrate transporter At1g59740 OS=Arabidopsis thaliana GN=At1g59740 PE=2 SV=1

 Score =  256 bits (654), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/332 (41%), Positives = 204/332 (61%), Gaps = 7/332 (2%)

Query: 9   KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
            + GG RA  FV  L A E MG  A G +++ Y  NEMHF ++ A+N +TNF G+ F+  
Sbjct: 40  NKHGGMRAALFVLGLQAFEIMGIAAVGNNLITYVINEMHFPLSKAANIVTNFVGTIFIFA 99

Query: 69  LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG---KSSC--LKGAI 123
           L+GG++SD +L  F T ++FG +E+   ++L++QA+   L PP C      +C   KG  
Sbjct: 100 LLGGYLSDAFLGSFWTIIIFGFVELSGFILLSVQAHLPQLKPPKCNPLIDQTCEEAKGFK 159

Query: 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 183
           A  F+ +LYL +LG G  +  + A GA QF ++ PK +K L+SYFN   FA ++  +I +
Sbjct: 160 AMIFFMALYLVALGSGCVKPNMIAHGADQFSQSHPKQSKRLSSYFNAAYFAFSMGELIAL 219

Query: 184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243
           T +V+V    G  +GF +S+ A  +G+I+L  G  ++R ++P  S    +A VIV AI  
Sbjct: 220 TLLVWVQTHSGMDIGFGVSAAAMTMGIISLVSGTMYFRNKRPRRSIFTPIAHVIVAAILK 279

Query: 244 RKLSLPDNPEELYEINKI-ERVGTEERIPHTNQFRCLDKAAIVPKDS-TAAAPWRVCTVT 301
           RKL+ P +P  L+  + +   V     +PHT +FR LDKA I  +D+ T  +PWR+CTVT
Sbjct: 280 RKLASPSDPRMLHGDHHVANDVVPSSTLPHTPRFRFLDKACIKIQDTNTKESPWRLCTVT 339

Query: 302 QVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           QVE+VK L  ++PI ASTI+ NT LAQLQT S
Sbjct: 340 QVEQVKTLISLVPIFASTIVFNTILAQLQTFS 371

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VYE4|PTR12_ARATH Probable peptide/nitrate transporter At1g27040 OS=Arabidopsis thaliana GN=At1g27040 PE=2 SV=1

 Score =  221 bits (562), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/339 (38%), Positives = 200/339 (58%), Gaps = 15/339 (4%)

Query: 3   DKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG 62
           +K A   + GG  A +FV  +  LEN+ F+AN  ++VLY KN MH  +A +S+ +T F  
Sbjct: 20  NKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNFMHMSLARSSSEVTTFMA 79

Query: 63  STFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLK-- 120
           + FLL L+GGF++D + S F   L+  ++E L L++LTIQA   SL PP C  S+ L+  
Sbjct: 80  TAFLLALLGGFLADAFFSTFVIFLISASIEFLGLILLTIQARRPSLMPPPCKSSAALRCE 139

Query: 121 ---GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177
              G+ AA+ +  LYL SLG GG +G+LP+ GA QFDE  PKG K  +++FN+Y+F  + 
Sbjct: 140 VVGGSKAAFLFVGLYLVSLGIGGIKGSLPSHGAEQFDEGTPKGRKQRSTFFNYYVFCLSC 199

Query: 178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVI 237
            A++ VT +V++  ++GW  GF +S+++  + ++   +G  FY+ + P  SPL  + +V+
Sbjct: 200 GALVAVTFVVWIEDNKGWEWGFGVSTISIFLSILVFLLGSRFYKNKIPRGSPLTTIFKVL 259

Query: 238 VVAIKNRKLSLPDNPEELYEINKIERVGTEERIPH---TNQFRCLDKAAIVPKDSTAAAP 294
           + A     +S        +  ++  +   EE+ P    TN   CL+KA     +      
Sbjct: 260 LAA---SIVSCSSKTSSNHFTSREVQSEHEEKTPSQSLTNSLTCLNKAI----EGKTHHI 312

Query: 295 WRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           W  CTV QVE+VKI+ +M+PI   TI++N CLAQL T S
Sbjct: 313 WLECTVQQVEDVKIVLKMLPIFGCTIMLNCCLAQLSTYS 351

Arabidopsis thaliana (taxid: 3702)

>sp|Q05085|PTR7_ARATH Nitrate transporter 1.1 OS=Arabidopsis thaliana GN=NRT1.1 PE=1 SV=1

 Score =  215 bits (548), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/349 (35%), Positives = 197/349 (56%), Gaps = 13/349 (3%)

Query: 4   KVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGS 63
           + A   + GG+ +   +  + A+E +  +  G+++V Y    MH   A A+NT+TNF G+
Sbjct: 21  RPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGT 80

Query: 64  TFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG---KSSCLK 120
           +F+LCL+GGFI+DT+L R+ T  +F  ++   + +LT+      L PP C     S C +
Sbjct: 81  SFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQ 140

Query: 121 --GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA 178
             G      Y +LYL +LG GG + ++   G+ QFDE +PK    +  +FN + F   + 
Sbjct: 141 ASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVG 200

Query: 179 AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIV 238
           +++ VT +VYV  D G   G+ I + A ++ L     G   YR ++   SP+ +VA VIV
Sbjct: 201 SLLAVTVLVYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIV 260

Query: 239 VAIKNRKLSLPDNPEELYEINKI----ERVGTEERIPHTNQFRCLDKAAIVPKDSTAAA- 293
            A +NRKL LP +P  LY+++ I      +  ++++PHT QFR LDKAAI  +++   + 
Sbjct: 261 AAWRNRKLELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQEAGVTSN 320

Query: 294 ---PWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQES 339
               W + T+T VEEVK + RM+PI A+ I+  T  AQL TLS    E+
Sbjct: 321 VFNKWTLSTLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSET 369

Dual affinity nitrate transporter. Involved in proton-dependent nitrate uptake and in the regulation of the nitrate transporter NRT2.1. Acts also as a nitrate sensor that trigger a specific signaling pathway stimulating lateral root growth and seed germination. The uptake activity is not required for sensor function. Displays an auxin transport facilitation inhibited by high nitrate concentration. Required to prevent auxin accumulation in preemerged lateral root primordia and young lateral roots when external nitrate concentration is low or null. May be involved in the basipetal transport of auxin out of the lateral root tips.

Arabidopsis thaliana (taxid: 3702)

>sp|Q56XQ6|PTR15_ARATH Probable peptide/nitrate transporter At1g33440 OS=Arabidopsis thaliana GN=At1g33440 PE=2 SV=1

 Score =  215 bits (547), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 134/331 (40%), Positives = 194/331 (58%), Gaps = 13/331 (3%)

Query: 10  QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCL 69
           + GG RA  FV    A E M   A G +++ Y  NEMHF ++ ++N +TNF G+ FLL L
Sbjct: 38  KHGGTRAALFVLGFQAFEMMAIAAVGNNLITYVFNEMHFPLSKSANLVTNFIGTVFLLSL 97

Query: 70  VGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS----CLK--GAI 123
           +GGF+SD+YL  F T LVFG +E+   ++L++QA+   L PP+C   S    C++  G  
Sbjct: 98  LGGFLSDSYLGSFRTMLVFGVIEISGFILLSVQAHLPELRPPECNMKSTTIHCVEANGYK 157

Query: 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 183
           AA  Y +L L +LG G  +  + + GA QF   D    + L+S+FN   FA ++  +I +
Sbjct: 158 AATLYTALCLVALGSGCLKPNIISHGANQFQRKD---LRKLSSFFNAAYFAFSMGQLIAL 214

Query: 184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243
           T +V+V    G  +GF +S+     G+I+L  G  FYR + P  S    +AQV V AI  
Sbjct: 215 TLLVWVQTHSGMDVGFGVSAAVMAAGMISLVAGTSFYRNKPPSGSIFTPIAQVFVAAITK 274

Query: 244 RKLSLPDNPEELYEIN-KIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQ 302
           RK   P NP  +++ +  + RV   + + H+N+FR LDKA I  +     +PWR+CT+ Q
Sbjct: 275 RKQICPSNPNMVHQPSTDLVRV---KPLLHSNKFRFLDKACIKTQGKAMESPWRLCTIEQ 331

Query: 303 VEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           V +VKIL  ++PI A TII NT LAQLQT S
Sbjct: 332 VHQVKILLSVIPIFACTIIFNTILAQLQTFS 362

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H157|PTR19_ARATH Nitrate transporter 1.2 OS=Arabidopsis thaliana GN=NRT1.2 PE=1 SV=1

 Score =  213 bits (542), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 204/355 (57%), Gaps = 28/355 (7%)

Query: 3   DKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG 62
           ++ A   + GG  A +FV V+  LEN+ ++AN  ++VLY +  MH   + ++N +TNF G
Sbjct: 18  NRAAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHMSPSKSANDVTNFMG 77

Query: 63  STFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC--LK 120
           + FLL L+GGF+SD + S F   L+  ++E L L++LTIQA + SL PP C   +C  + 
Sbjct: 78  TAFLLALLGGFLSDAFFSTFQIFLISASIEFLGLIILTIQARTPSLMPPSCDSPTCEEVS 137

Query: 121 GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180
           G+ AA  +  LYL +LG GG +G+L + GA QFDE+ PKG K  +++FN+++F     A+
Sbjct: 138 GSKAAMLFVGLYLVALGVGGIKGSLASHGAEQFDESTPKGRKQRSTFFNYFVFCLACGAL 197

Query: 181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVA 240
           + VT +V++  ++GW  GF +S++A  + ++    G  FYR + P  SPL  + +V++ A
Sbjct: 198 VAVTFVVWLEDNKGWEWGFGVSTIAIFVSILIFLSGSRFYRNKIPCGSPLTTILKVLLAA 257

Query: 241 ---------IKNRKLSLPDNP---------EELYEINKIERVGTEERIPH----TNQFRC 278
                      N   S+  +P         +E+    ++E+   EE +P     TN  + 
Sbjct: 258 SVKCCSSGSSSNAVASMSVSPSNHCVSKGKKEVESQGELEKPRQEEALPPRAQLTNSLKV 317

Query: 279 LDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           L+ AA    D         CTV QVE+VKI+ +M+PI A TI++N CLAQL T S
Sbjct: 318 LNGAA----DEKPVHRLLECTVQQVEDVKIVLKMLPIFACTIMLNCCLAQLSTFS 368

Low-affinity proton-dependent nitrate transporter. Involved in constitutive nitrate uptake. Not involved in histidine or dipeptides transport.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M390|PTR1_ARATH Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1

 Score =  210 bits (535), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 188/333 (56%), Gaps = 6/333 (1%)

Query: 6   AGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTF 65
           A  ++ G ++AC F+      E + +   G ++V Y ++ ++   A A+N +TN+ G+ +
Sbjct: 20  ANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCY 79

Query: 66  LLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL-KGAIA 124
           +  L+G FI+D YL R+ T   F  + V  + +LT+ A    L P +C   +C    +  
Sbjct: 80  ITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQT 139

Query: 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184
           A F+ +LY+ +LG GG +  + + GA QFDEND       +S+FN++ F+  + A+I  T
Sbjct: 140 AVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAAT 199

Query: 185 AIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNR 244
            +V++ ++ GW  GF + +VA +I +     G  FYR+Q+PG SPL R+ QVIV A +  
Sbjct: 200 VLVWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKI 259

Query: 245 KLSLPDNPEELYEINKIE-RVGTEERIPHTNQFRCLDKAAIVPKDST----AAAPWRVCT 299
            + +P++   L+E    E  +    ++ HT+  +  DKAA+  +  +       PWR+C+
Sbjct: 260 SVKVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCS 319

Query: 300 VTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
           VTQVEE+K +  ++P+ A+ I+  T  +Q+ T+
Sbjct: 320 VTQVEELKSIITLLPVWATGIVFATVYSQMSTM 352

Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter with low selectivity. No transport of amino acids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q93Z20|PTR17_ARATH Probable peptide/nitrate transporter At1g62200 OS=Arabidopsis thaliana GN=At1g62200 PE=2 SV=1

 Score =  210 bits (534), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 188/337 (55%), Gaps = 16/337 (4%)

Query: 9   KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
           K+ G ++AC F+      E + +     +++ Y+ +E+H     A++ +  + G+ ++  
Sbjct: 51  KKTGNWKACPFILGNECCERLAYYGIAKNLITYYTSELHESNVSAASDVMIWQGTCYITP 110

Query: 69  LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD--------CGKSSCLK 120
           L+G  I+D+Y  R+ T   F  +  + + +LT+ A    L P          C  ++ ++
Sbjct: 111 LIGAVIADSYWGRYWTIASFSAIYFIGMALLTLSASLPVLKPAACAGVAAALCSPATTVQ 170

Query: 121 GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM 180
            A+   F+  LYL +LG GG +  + + GA QFD+ DP+     AS+FN++ F+  + + 
Sbjct: 171 YAV---FFTGLYLIALGTGGIKPCVSSFGADQFDDTDPRERVRKASFFNWFYFSINIGSF 227

Query: 181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVA 240
           I  T +V+V  + GW LGFLI +V   + + +  IG P YR Q+PG SP+ RV QV+V A
Sbjct: 228 ISSTLLVWVQENVGWGLGFLIPTVFMGVSIASFFIGTPLYRFQKPGGSPITRVCQVLVAA 287

Query: 241 IKNRKLSLPDNPEELYEI-NKIERVGTEERIPHTNQFRCLDKAAIV----PKDSTAAAPW 295
            +  KL+LP++   LYE   K   +    +I HT+ ++ LDKAA++     K    + PW
Sbjct: 288 YRKLKLNLPEDISFLYETREKNSMIAGSRKIQHTDGYKFLDKAAVISEYESKSGAFSNPW 347

Query: 296 RVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
           ++CTVTQVEEVK L RM PI AS I+ +   +Q+ TL
Sbjct: 348 KLCTVTQVEEVKTLIRMFPIWASGIVYSVLYSQISTL 384

Arabidopsis thaliana (taxid: 3702)

>sp|P46032|PTR2_ARATH Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1

 Score =  208 bits (529), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 184/331 (55%), Gaps = 7/331 (2%)

Query: 9   KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
           ++ G ++AC F+      E + +     +++ Y   ++H     A+  +T + G+ +L  
Sbjct: 40  EKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTP 99

Query: 69  LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY-- 126
           L+G  ++D Y  R+ T   F  +  + +  LT+ A   +L P +C    C     A Y  
Sbjct: 100 LIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGDFCPSATPAQYAM 159

Query: 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186
           F+G LYL +LG GG +  + + GA QFD+ D +     AS+FN++ F+  + A++  + +
Sbjct: 160 FFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLL 219

Query: 187 VYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246
           V++  ++GW LGF I +V   + + +   G P YR Q+PG SP+ R++QV+V + +   +
Sbjct: 220 VWIQENRGWGLGFGIPTVFMGLAIASFFFGTPLYRFQKPGGSPITRISQVVVASFRKSSV 279

Query: 247 SLPDNPEELYEI-NKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAA----PWRVCTVT 301
            +P++   LYE  +K   +    +I HT+  + LDKAA++ ++ + +      WR+CTVT
Sbjct: 280 KVPEDATLLYETQDKNSAIAGSRKIEHTDDCQYLDKAAVISEEESKSGDYSNSWRLCTVT 339

Query: 302 QVEEVKILARMMPILASTIIMNTCLAQLQTL 332
           QVEE+KIL RM PI AS II +   AQ+ T+
Sbjct: 340 QVEELKILIRMFPIWASGIIFSAVYAQMSTM 370

Peptide transporter. Mediates the transport of di- and tripeptides. High affinity, low capacity transporter. Can also transport histidine.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYR6|PTR49_ARATH Probable peptide/nitrate transporter At5g13400 OS=Arabidopsis thaliana GN=At5g13400 PE=2 SV=1

 Score =  206 bits (524), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 12/344 (3%)

Query: 2   GDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF 61
           G  +A + + GG+ A  F+F     E M +    ++MV +    MH     +SN + NF 
Sbjct: 56  GKPIANLSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSSNAVNNFL 115

Query: 62  GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP--PDCGKSSCL 119
           G +    ++GGF++D YL R+ T  +F T+ ++ L+ +T+ A  K   P   +CG+ S L
Sbjct: 116 GISQASSVLGGFLADAYLGRYWTIAIFTTMYLVGLIGITLGASLKMFVPDQSNCGQLSLL 175

Query: 120 KGAIAA-------YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL 172
            G           Y Y  LY+   G  G R  + + GA QFDE        L  +FNF+ 
Sbjct: 176 LGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDEKSKDYKTHLDRFFNFFY 235

Query: 173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVR 232
            + TL A+I  T +VYV ++ GW + F   +VA  I       G P YR + PG SPL R
Sbjct: 236 LSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTR 295

Query: 233 VAQVIVVAIKNRKLSLPDNP-EELYEINKIER-VGTEERIPHTNQFRCLDKAAI-VPKDS 289
           VAQV+V A + R  +   +    LYE+  ++  +    +IPH+N F  LDKAA+ + +D 
Sbjct: 296 VAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSAINGSRKIPHSNDFIWLDKAALELKEDG 355

Query: 290 TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
              +PW++CTVTQVEEVKIL R++PI   TI+++  L +  TLS
Sbjct: 356 LEPSPWKLCTVTQVEEVKILIRLIPIPTCTIMLSLVLTEYLTLS 399

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFB8|PTR5_ARATH Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1

 Score =  200 bits (508), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 186/335 (55%), Gaps = 7/335 (2%)

Query: 4   KVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGS 63
           K A   + G ++AC F+      E + +     +++ Y + +M+ +   AS +++N+ G+
Sbjct: 19  KPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGT 78

Query: 64  TFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123
            +   L+G FI+D YL R+ T   F  + +  + +LTI A    L P   G++       
Sbjct: 79  CYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTPTCSGETCHATAGQ 138

Query: 124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 183
            A  + +LYL +LG GG +  + + GA QFD+ D K  ++ +S+FN++ F   + AMI  
Sbjct: 139 TAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIAS 198

Query: 184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243
           + +V++ ++ GW  G  + +VA  I ++    G  FYR+Q+PG SPL R+ QVIV + + 
Sbjct: 199 SVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVASCRK 258

Query: 244 RKLSLPDNPEELYEINKIER--VGTEERIPHTNQFRCLDKAAI-VPKDSTAAAP---WRV 297
            K+ +P++   LYE    E   +G+  ++ HT      DKAA+    D+  AA    W++
Sbjct: 259 SKVKIPEDESLLYENQDAESSIIGS-RKLEHTKILTFFDKAAVETESDNKGAAKSSSWKL 317

Query: 298 CTVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
           CTVTQVEE+K L R++PI A+ I+  +  +Q+ T+
Sbjct: 318 CTVTQVEELKALIRLLPIWATGIVFASVYSQMGTV 352

Peptide transporter. Mediates the transport of di- and tripeptides. High affinity transporter. Involved in the uptake of peptides during pollen germination and tube growth.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
357441977	606	Peptide transporter PTR1 [Medicago trunc	0.953	0.544	0.628	1e-121
356574054	618	PREDICTED: probable peptide/nitrate tran	0.947	0.530	0.632	1e-118
357511669	585	Peptide transporter PTR1 [Medicago trunc	0.930	0.550	0.636	1e-117
356534943	604	PREDICTED: probable peptide/nitrate tran	0.950	0.544	0.629	1e-117
255543056	640	nitrate transporter, putative [Ricinus c	0.930	0.503	0.634	1e-115
356505723	582	PREDICTED: nitrate transporter 1.2-like	0.930	0.553	0.621	1e-115
225450417	736	PREDICTED: probable peptide/nitrate tran	0.930	0.437	0.625	1e-114
296089862	626	unnamed protein product [Vitis vinifera]	0.930	0.514	0.625	1e-114
224124288	623	predicted protein [Populus trichocarpa]	0.945	0.524	0.604	1e-104
449454111	662	PREDICTED: probable peptide/nitrate tran	0.930	0.486	0.604	1e-103

>gi|357441977|ref|XP_003591266.1| Peptide transporter PTR1 [Medicago truncatula] gi|355480314|gb|AES61517.1| Peptide transporter PTR1 [Medicago truncatula]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/342 (62%), Positives = 264/342 (77%), Gaps = 12/342 (3%)

Query: 1   MGDK---------VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA 51
           MGDK         +   KQKGGFRA  F+FVLSAL+NMGF+ N +S+VLYF   MHFD++
Sbjct: 1   MGDKEVKEELKPIIQWKKQKGGFRASMFIFVLSALDNMGFVTNMVSLVLYFIGVMHFDLS 60

Query: 52  GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPP 111
            ++NTLTNF GSTFLL LVG FISDTYL+RF TCLVFG+LEV++LVM+T+QA   +LHP 
Sbjct: 61  SSANTLTNFMGSTFLLSLVGAFISDTYLNRFTTCLVFGSLEVMALVMITVQAALDNLHPK 120

Query: 112 DCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY 171
            CGKSSC++G IA  FY SL LY+LG GG RG+L A GA QFDE DP  AKALA++FN+ 
Sbjct: 121 ACGKSSCVEGGIAVMFYTSLCLYALGMGGVRGSLTAFGANQFDEKDPNEAKALATFFNWL 180

Query: 172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLV 231
           L ++TL ++IGVT IV+V   + W  GF I +VA+ IG + LAIGKPFYRI+ PGESP++
Sbjct: 181 LLSSTLGSVIGVTGIVWVSTQKAWHWGFFIITVASSIGFVTLAIGKPFYRIKTPGESPIL 240

Query: 232 RVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTA 291
           R+ QVIVVA KNRKL LP++ E+LYE+ K     T E+I HTNQ R LDKAAI+ ++S +
Sbjct: 241 RIIQVIVVAFKNRKLQLPESNEQLYEVYK---DATIEKIVHTNQMRFLDKAAILQENSES 297

Query: 292 AAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
             PW+VCTVTQVEEVKIL RM+PILASTI+MNTCLAQLQT S
Sbjct: 298 QQPWKVCTVTQVEEVKILTRMLPILASTIVMNTCLAQLQTFS 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574054|ref|XP_003555167.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/332 (63%), Positives = 261/332 (78%), Gaps = 4/332 (1%)

Query: 2   GDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF 61
           GDK    + KGGFRA  F+FVLSAL+NMGF+AN +S+VLYF   MHFD++ ++NTLTNF 
Sbjct: 19  GDKEVKEELKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSNSANTLTNFM 78

Query: 62  GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG 121
           GSTFLL LVGGFISDTY +R  TCL+FG+LEVL+LVMLT+QA    LHP  CGKSSC+KG
Sbjct: 79  GSTFLLSLVGGFISDTYFNRLTTCLLFGSLEVLALVMLTVQAALDHLHPDFCGKSSCVKG 138

Query: 122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMI 181
            IA  FY SLYL +LG GG RG+L A GA QF E +P+ AKALASYFN+ L ++TL ++I
Sbjct: 139 GIAVMFYSSLYLLALGMGGVRGSLTAFGADQFGEKNPQEAKALASYFNWLLLSSTLGSII 198

Query: 182 GVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAI 241
           GVT +V+V   + W  GF+I +VA+ IG + LA+GKPFYRI+ PG+SP+ R+AQVIVVA 
Sbjct: 199 GVTGVVWVSTQKAWHWGFIIITVASSIGFLTLALGKPFYRIKTPGQSPISRIAQVIVVAF 258

Query: 242 KNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVT 301
           KNRKL LP++ EELYE+ +     T E+I HTNQ R LD+A+I+ +++  + PW+VCTVT
Sbjct: 259 KNRKLPLPESNEELYEVYE---EATLEKIAHTNQMRFLDRASIL-QENIESRPWKVCTVT 314

Query: 302 QVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           QVEEVKIL RM+PILASTIIMNTCLAQLQT S
Sbjct: 315 QVEEVKILTRMLPILASTIIMNTCLAQLQTFS 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511669|ref|XP_003626123.1| Peptide transporter PTR1 [Medicago truncatula] gi|87241322|gb|ABD33180.1| TGF-beta receptor, type I/II extracellular region [Medicago truncatula] gi|355501138|gb|AES82341.1| Peptide transporter PTR1 [Medicago truncatula]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/325 (63%), Positives = 255/325 (78%), Gaps = 3/325 (0%)

Query: 9   KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
           ++KGGFRA  F+FVLSAL+NMGF+AN +S+VLYF   MHFDI  ++NTLTNF GSTFLL 
Sbjct: 18  RKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDIPSSANTLTNFMGSTFLLS 77

Query: 69  LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY 128
           LVGGFISDTYL+RF TCL+FG+LEVL+L ++T QA S  LHP  CGKSSC+KG I   FY
Sbjct: 78  LVGGFISDTYLNRFTTCLLFGSLEVLALALVTFQAASDHLHPNACGKSSCVKGGIEFMFY 137

Query: 129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY 188
            SL L +LG GG RG++ A GA QF+E D   AKALAS+FN+ L ++TL A+ GVT +V+
Sbjct: 138 TSLSLLALGIGGVRGSMTAFGADQFEEKDSNEAKALASFFNWLLLSSTLGAITGVTGVVW 197

Query: 189 VFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSL 248
           V   + W  GF I ++A+ IG + LA+GKPFYRI+ PG+SP +R+AQVIVVA KNRKLSL
Sbjct: 198 VSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPGDSPTIRIAQVIVVAFKNRKLSL 257

Query: 249 PDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKI 308
           P++ EELYEI+  ++ GT E+I HT Q R LDKAAI P++     PW+VCTVTQVEEVKI
Sbjct: 258 PESHEELYEIS--DKDGTVEKIVHTKQMRFLDKAAI-PQEYIKPQPWKVCTVTQVEEVKI 314

Query: 309 LARMMPILASTIIMNTCLAQLQTLS 333
           L RM+PI+ASTIIMNTCLAQLQT S
Sbjct: 315 LTRMLPIVASTIIMNTCLAQLQTFS 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534943|ref|XP_003536010.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 211/335 (62%), Positives = 264/335 (78%), Gaps = 6/335 (1%)

Query: 1   MGDK-VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTN 59
           MGDK V   +QKGGFRA  F+FVLSAL+NMGF+AN +S+VLYF   MHFD++ ++NTLTN
Sbjct: 1   MGDKEVKEEEQKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSNSANTLTN 60

Query: 60  FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL 119
           F GSTFLL LVGGFISDTY +R  TCL+FG+LEVL+LVMLT+QA    LHP  CGKSSC+
Sbjct: 61  FMGSTFLLSLVGGFISDTYFNRLTTCLLFGSLEVLALVMLTVQAGLDHLHPDYCGKSSCV 120

Query: 120 KGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE-NDPKGAKALASYFNFYLFATTLA 178
           KG IA  FY SLYL +LG GG RG+L A GA QFDE  +P  AKALAS+FN+ L ++TL 
Sbjct: 121 KGGIAVMFYSSLYLLALGMGGVRGSLTAFGADQFDEKKNPGEAKALASFFNWILLSSTLG 180

Query: 179 AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIV 238
           ++IGVT +V+V   + W  GF+I ++A+ IG + LA+GKPFYRI+ PG+SP++R+AQVIV
Sbjct: 181 SIIGVTGVVWVSTQKAWHWGFIIITIASSIGFLTLALGKPFYRIKTPGQSPILRIAQVIV 240

Query: 239 VAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVC 298
           VA KNRKL LP++ EELYE+ +     T E+I HTNQ R LD+A+I+ +++  +  W+VC
Sbjct: 241 VAFKNRKLPLPESDEELYEVYED---ATLEKIAHTNQMRFLDRASIL-QENIESQQWKVC 296

Query: 299 TVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
           TVTQVEEVKIL RM+PILASTIIMNTCLAQLQT S
Sbjct: 297 TVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFS 331

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543056|ref|XP_002512591.1| nitrate transporter, putative [Ricinus communis] gi|223548552|gb|EEF50043.1| nitrate transporter, putative [Ricinus communis]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/323 (63%), Positives = 259/323 (80%), Gaps = 1/323 (0%)

Query: 11  KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLV 70
           KGGFRAC FVFVL AL+NMGFIAN +S+VLYF   M+FDI  ++NTLTN  GS FLL L+
Sbjct: 18  KGGFRACMFVFVLVALDNMGFIANMVSLVLYFLKVMYFDIPNSANTLTNLMGSIFLLTLL 77

Query: 71  GGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS 130
           GGFISDT+L++  T L+F  +E+L++V++TIQA++KSLHPP CGK  C++G I    Y S
Sbjct: 78  GGFISDTFLNKLYTVLLFAVIEILAMVLMTIQAHAKSLHPPYCGKPKCVEGKIEFTLYAS 137

Query: 131 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190
           L L +LG GG RG LP+LGA QF++NDP+ AK LA+YFN+   +T L A +GVT IV+V 
Sbjct: 138 LALLALGSGGVRGALPSLGADQFNQNDPEEAKDLATYFNWMTLSTVLGAAVGVTGIVWVS 197

Query: 191 IDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250
           ++  W+ GF+IS++A  +G I LA GK +Y +++PGESPL+R+ QV VVAIKNRKLSLP+
Sbjct: 198 VNDAWYKGFMISTIAAFVGFIVLACGKRYYHLKEPGESPLIRIVQVFVVAIKNRKLSLPE 257

Query: 251 NPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILA 310
           NPEELYEI+  ER+ ++E+I HT+QFR LD+AAI+PKD T AAPW+VCTVTQVEEVKIL 
Sbjct: 258 NPEELYEISDEERIYSDEKIAHTDQFRFLDRAAILPKDLT-AAPWQVCTVTQVEEVKILT 316

Query: 311 RMMPILASTIIMNTCLAQLQTLS 333
           RMMPIL STIIMNTCLAQLQT S
Sbjct: 317 RMMPILFSTIIMNTCLAQLQTFS 339

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505723|ref|XP_003521639.1| PREDICTED: nitrate transporter 1.2-like [Glycine max]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/325 (62%), Positives = 257/325 (79%), Gaps = 3/325 (0%)

Query: 9   KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
           + KGGF A  F+FVLSAL+NMGF+AN +S+VLYF   MHFD+A ++NTLTNF GST+LL 
Sbjct: 24  RSKGGFMASMFIFVLSALDNMGFVANMVSIVLYFYGVMHFDLASSANTLTNFMGSTYLLS 83

Query: 69  LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY 128
           LVGGFISDTYL+RF TCL+FG+LEVL+L MLT+QA SK LHP  CGKSSC+KG IA  FY
Sbjct: 84  LVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASKHLHPEACGKSSCVKGGIAVMFY 143

Query: 129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY 188
            SL L +LG GG RG++ A GA QFDE DP  AKALAS+FN+ L ++T+ A+ GVT +V+
Sbjct: 144 TSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVW 203

Query: 189 VFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSL 248
           V   + W  GF I ++A+ +G + LA+GK FYRI+ PG+SP +R+AQVIVV+ KNRKLSL
Sbjct: 204 VSTQKAWHWGFFIITIASSVGFVTLALGKQFYRIKTPGDSPTLRIAQVIVVSFKNRKLSL 263

Query: 249 PDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKI 308
           P++  ELYEI+  ++  T E+I HTNQ R LDKAAI+ ++S+    W++CTVTQVEEVKI
Sbjct: 264 PESHGELYEIS--DKDATAEKIAHTNQMRFLDKAAII-QESSKPQAWKICTVTQVEEVKI 320

Query: 309 LARMMPILASTIIMNTCLAQLQTLS 333
           L RM+PI+ASTII+NTC+AQLQT S
Sbjct: 321 LTRMLPIVASTIILNTCMAQLQTFS 345

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450417|ref|XP_002276071.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Vitis vinifera]

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/323 (62%), Positives = 248/323 (76%), Gaps = 1/323 (0%)

Query: 11  KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLV 70
           KGGFRA  F+++L++LENMGF+AN +S+  YF   MHFD++GA+NTLTNF G+TFLL LV
Sbjct: 140 KGGFRASMFIYILTSLENMGFVANMVSLFSYFYGLMHFDLSGAANTLTNFMGATFLLSLV 199

Query: 71  GGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS 130
           GGF+SDT LSR  TCL+FGT+E+L L+++TIQAYS  LHP DCGK SC++G  A  FY S
Sbjct: 200 GGFVSDTLLSRLNTCLIFGTIELLGLMLMTIQAYSNKLHPADCGKPSCVEGGTAVMFYVS 259

Query: 131 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190
           L LY+LG GG RG LPALGA QF++ DP  A+ALAS+FN+ + + T+ A +GVT IV+V 
Sbjct: 260 LCLYALGSGGVRGALPALGADQFNQKDPNEAEALASFFNWVILSATVGASVGVTVIVWVS 319

Query: 191 IDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250
               W+ GF IS V   IG I LA+G+ FYRIQ  G+SP++R  QVIVVAIKNR LS P+
Sbjct: 320 STVTWYWGFFISLVTAFIGFIVLALGRRFYRIQPHGQSPIIRTVQVIVVAIKNRSLSPPE 379

Query: 251 NPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILA 310
           +P ELYEIN      T+ ++ HT+QFRCLDKAAI+ KDS    PW VCTVTQVEEVKIL 
Sbjct: 380 SPGELYEINDQVTDFTDPKLAHTDQFRCLDKAAILGKDS-EPRPWEVCTVTQVEEVKILT 438

Query: 311 RMMPILASTIIMNTCLAQLQTLS 333
           RM+PIL STIIMNTCLAQLQT S
Sbjct: 439 RMLPILFSTIIMNTCLAQLQTFS 461

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089862|emb|CBI39681.3| unnamed protein product [Vitis vinifera]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/323 (62%), Positives = 248/323 (76%), Gaps = 1/323 (0%)

Query: 11  KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLV 70
           KGGFRA  F+++L++LENMGF+AN +S+  YF   MHFD++GA+NTLTNF G+TFLL LV
Sbjct: 30  KGGFRASMFIYILTSLENMGFVANMVSLFSYFYGLMHFDLSGAANTLTNFMGATFLLSLV 89

Query: 71  GGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS 130
           GGF+SDT LSR  TCL+FGT+E+L L+++TIQAYS  LHP DCGK SC++G  A  FY S
Sbjct: 90  GGFVSDTLLSRLNTCLIFGTIELLGLMLMTIQAYSNKLHPADCGKPSCVEGGTAVMFYVS 149

Query: 131 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190
           L LY+LG GG RG LPALGA QF++ DP  A+ALAS+FN+ + + T+ A +GVT IV+V 
Sbjct: 150 LCLYALGSGGVRGALPALGADQFNQKDPNEAEALASFFNWVILSATVGASVGVTVIVWVS 209

Query: 191 IDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250
               W+ GF IS V   IG I LA+G+ FYRIQ  G+SP++R  QVIVVAIKNR LS P+
Sbjct: 210 STVTWYWGFFISLVTAFIGFIVLALGRRFYRIQPHGQSPIIRTVQVIVVAIKNRSLSPPE 269

Query: 251 NPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILA 310
           +P ELYEIN      T+ ++ HT+QFRCLDKAAI+ KDS    PW VCTVTQVEEVKIL 
Sbjct: 270 SPGELYEINDQVTDFTDPKLAHTDQFRCLDKAAILGKDS-EPRPWEVCTVTQVEEVKILT 328

Query: 311 RMMPILASTIIMNTCLAQLQTLS 333
           RM+PIL STIIMNTCLAQLQT S
Sbjct: 329 RMLPILFSTIIMNTCLAQLQTFS 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124288|ref|XP_002329986.1| predicted protein [Populus trichocarpa] gi|222871411|gb|EEF08542.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/329 (60%), Positives = 256/329 (77%), Gaps = 2/329 (0%)

Query: 5   VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGST 64
           +AG K +GGFRA  FV+ L AL++MGF+AN +S+VLYF   MHFDI  ++NTLTN  GST
Sbjct: 24  LAGKKGRGGFRATMFVYGLVALDSMGFVANMVSLVLYFMGVMHFDIPTSANTLTNLMGST 83

Query: 65  FLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA 124
           FLL ++GGFISD YL+R  T L+FG LE+++LV++TIQA++K++HPP CGK+SC++G I 
Sbjct: 84  FLLTVLGGFISDAYLNRLHTVLLFGFLEIMALVLITIQAHAKNMHPPACGKASCVEGGIE 143

Query: 125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184
              Y SL L +LG GG RG LPALGA QF+E DP+ A+ALASYFN+   +T + A++GVT
Sbjct: 144 YMLYFSLGLLALGSGGVRGALPALGADQFNEKDPEEARALASYFNWMTLSTVVGAVVGVT 203

Query: 185 AIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNR 244
            IV + +  GWW GFL+S+V T IG + LA GKPFY ++QPG+SPL+R+AQV  +AI+NR
Sbjct: 204 GIVNLSMFHGWWKGFLVSTVGTFIGFVILAAGKPFYHLRQPGDSPLIRIAQVFALAIRNR 263

Query: 245 KLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVE 304
           +L LP   EELYEI+  E +  EE++ HT QFR LDKAAI+P + T  APW+VC+VTQVE
Sbjct: 264 RLPLP-KVEELYEISDKETIAYEEKLEHTEQFRFLDKAAILP-EGTQPAPWKVCSVTQVE 321

Query: 305 EVKILARMMPILASTIIMNTCLAQLQTLS 333
           EVKIL RM+PIL STIIMNTCLAQLQT S
Sbjct: 322 EVKILTRMLPILGSTIIMNTCLAQLQTFS 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449454111|ref|XP_004144799.1| PREDICTED: probable peptide/nitrate transporter At1g59740-like [Cucumis sativus]

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/324 (60%), Positives = 241/324 (74%), Gaps = 2/324 (0%)

Query: 11  KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLV 70
           KGGFRA  F+F L   E+MGF+AN  S+V YF   MHFD+  A+NTLTNF GS FLL L+
Sbjct: 33  KGGFRATMFIFGLLTFESMGFVANMTSLVQYFLFVMHFDLQTAANTLTNFMGSAFLLSLL 92

Query: 71  GGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGS 130
           GGF+SDTY++R  TCL+FG LEV++L+++T+QAYS  L P       C+KG IA  FY S
Sbjct: 93  GGFLSDTYINRLNTCLIFGFLEVIALILITVQAYSHDLLPSPLCPKDCVKGRIAFVFYTS 152

Query: 131 LYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF 190
           LYL ++G GG RG LPALGA QF++ DPK AKAL ++FN+ L +  + A +GVT IV+V 
Sbjct: 153 LYLLAIGSGGVRGALPALGADQFNQKDPKEAKALGTFFNYMLLSVVIGAAVGVTLIVWVA 212

Query: 191 IDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD 250
           +++ W+ GF IS++A L+G I  AIGKPFYRIQ PG+SPL+RV QVIVVAIKNR+L LPD
Sbjct: 213 VNKAWYWGFFISALAALVGFIIFAIGKPFYRIQVPGQSPLLRVIQVIVVAIKNRRLRLPD 272

Query: 251 NPEELYEI-NKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKIL 309
            P ELYEI +K+       +I HTNQ R LDKAAIVPKD     PW VC+VTQVEEVKI+
Sbjct: 273 TPNELYEISDKLHMDSNHYKIVHTNQLRFLDKAAIVPKD-IEPQPWNVCSVTQVEEVKII 331

Query: 310 ARMMPILASTIIMNTCLAQLQTLS 333
            RM+PI  STIIMNTCLAQLQT S
Sbjct: 332 TRMVPIFVSTIIMNTCLAQLQTFS 355

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	346
TAIR|locus:2025886	591	AT1G59740 [Arabidopsis thalian	0.930	0.544	0.401	9.3e-59
TAIR|locus:2006907	601	AT1G33440 [Arabidopsis thalian	0.913	0.525	0.389	6.1e-55
TAIR|locus:2196739	585	NRT1:2 "AT1G69850" [Arabidopsi	0.679	0.401	0.365	3.3e-53
TAIR|locus:2205769	567	AT1G27040 [Arabidopsis thalian	0.933	0.569	0.364	3.8e-53
TAIR|locus:2008855	590	NRT1.1 "nitrate transporter 1.	0.947	0.555	0.343	3.6e-50
TAIR|locus:2018032	590	PTR6 "peptide transporter 6" [	0.936	0.549	0.332	1.2e-47
TAIR|locus:2181655	624	AT5G13400 [Arabidopsis thalian	0.959	0.532	0.345	6.9e-47
TAIR|locus:2080235	570	PTR1 "peptide transporter 1" [	0.936	0.568	0.311	1.6e-45
TAIR|locus:2043803	577	AT2G26690 [Arabidopsis thalian	0.924	0.554	0.329	1.9e-44
TAIR|locus:2150124	570	PTR5 "peptide transporter 5" [	0.939	0.570	0.310	1.9e-44

TAIR|locus:2025886 AT1G59740 [Arabidopsis thaliana (taxid:3702)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 132/329 (40%), Positives = 193/329 (58%)

Query:    12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVG 71
             GG RA  FV  L A E MG  A G +++ Y  NEMHF ++ A+N +TNF G+ F+  L+G
Sbjct:    43 GGMRAALFVLGLQAFEIMGIAAVGNNLITYVINEMHFPLSKAANIVTNFVGTIFIFALLG 102

Query:    72 GFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK---SSC--LKGAIAAX 126
             G++SD +L  F T ++FG +E+   ++L++QA+   L PP C      +C   KG  A  
Sbjct:   103 GYLSDAFLGSFWTIIIFGFVELSGFILLSVQAHLPQLKPPKCNPLIDQTCEEAKGFKAMI 162

Query:   127 XXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186
                            +  + A GA QF ++ PK +K L+SYFN   FA ++  +I +T +
Sbjct:   163 FFMALYLVALGSGCVKPNMIAHGADQFSQSHPKQSKRLSSYFNAAYFAFSMGELIALTLL 222

Query:   187 VYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246
             V+V    G  +GF +S+ A  +G+I+L  G  ++R ++P  S    +A VIV AI  RKL
Sbjct:   223 VWVQTHSGMDIGFGVSAAAMTMGIISLVSGTMYFRNKRPRRSIFTPIAHVIVAAILKRKL 282

Query:   247 SLPDNPEELYEINKIER-VGTEERIPHTNQFRCLDKAAIVPKDS-TAAAPWRVCTVTQVE 304
             + P +P  L+  + +   V     +PHT +FR LDKA I  +D+ T  +PWR+CTVTQVE
Sbjct:   283 ASPSDPRMLHGDHHVANDVVPSSTLPHTPRFRFLDKACIKIQDTNTKESPWRLCTVTQVE 342

Query:   305 EVKILARMMPILASTIIMNTCLAQLQTLS 333
             +VK L  ++PI ASTI+ NT LAQLQT S
Sbjct:   343 QVKTLISLVPIFASTIVFNTILAQLQTFS 371

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009624 "response to nematode" evidence=IEP;RCA

TAIR|locus:2006907 AT1G33440 [Arabidopsis thaliana (taxid:3702)]

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 128/329 (38%), Positives = 185/329 (56%)

Query:    12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVG 71
             GG RA  FV    A E M   A G +++ Y  NEMHF ++ ++N +TNF G+ FLL L+G
Sbjct:    40 GGTRAALFVLGFQAFEMMAIAAVGNNLITYVFNEMHFPLSKSANLVTNFIGTVFLLSLLG 99

Query:    72 GFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS----CLK--GAIAA 125
             GF+SD+YL  F T LVFG +E+   ++L++QA+   L PP+C   S    C++  G  AA
Sbjct:   100 GFLSDSYLGSFRTMLVFGVIEISGFILLSVQAHLPELRPPECNMKSTTIHCVEANGYKAA 159

Query:   126 XXXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA 185
                             +  + + GA QF   D    + L+S+FN   FA ++  +I +T 
Sbjct:   160 TLYTALCLVALGSGCLKPNIISHGANQFQRKD---LRKLSSFFNAAYFAFSMGQLIALTL 216

Query:   186 IVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRK 245
             +V+V    G  +GF +S+     G+I+L  G  FYR + P  S    +AQV V AI  RK
Sbjct:   217 LVWVQTHSGMDVGFGVSAAVMAAGMISLVAGTSFYRNKPPSGSIFTPIAQVFVAAITKRK 276

Query:   246 LSLPDNPEELYEINK-IERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVE 304
                P NP  +++ +  + RV   + + H+N+FR LDKA I  +     +PWR+CT+ QV 
Sbjct:   277 QICPSNPNMVHQPSTDLVRV---KPLLHSNKFRFLDKACIKTQGKAMESPWRLCTIEQVH 333

Query:   305 EVKILARMMPILASTIIMNTCLAQLQTLS 333
             +VKIL  ++PI A TII NT LAQLQT S
Sbjct:   334 QVKILLSVIPIFACTIIFNTILAQLQTFS 362

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009624 "response to nematode" evidence=RCA

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2196739 NRT1:2 "AT1G69850" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
 Identities = 87/238 (36%), Positives = 142/238 (59%)

Query:     6 AGIKQK-GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGST 64
             A +K + GG  A +FV V+  LEN+ ++AN  ++VLY +  MH   + ++N +TNF G+ 
Sbjct:    20 AAVKGRHGGMLAASFVLVVEILENLAYLANASNLVLYLREYMHMSPSKSANDVTNFMGTA 79

Query:    65 FLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC--LKGA 122
             FLL L+GGF+SD + S F   L+  ++E L L++LTIQA + SL PP C   +C  + G+
Sbjct:    80 FLLALLGGFLSDAFFSTFQIFLISASIEFLGLIILTIQARTPSLMPPSCDSPTCEEVSGS 139

Query:   123 IAAXXXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG 182
              AA                +G+L + GA QFDE+ PKG K  +++FN+++F     A++ 
Sbjct:   140 KAAMLFVGLYLVALGVGGIKGSLASHGAEQFDESTPKGRKQRSTFFNYFVFCLACGALVA 199

Query:   183 VTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVA 240
             VT +V++  ++GW  GF +S++A  + ++    G  FYR + P  SPL  + +V++ A
Sbjct:   200 VTFVVWLEDNKGWEWGFGVSTIAIFVSILIFLSGSRFYRNKIPCGSPLTTILKVLLAA 257

GO:0005215 "transporter activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0009624 "response to nematode" evidence=IEP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0080168 "abscisic acid transport" evidence=IDA

GO:0090440 "abscisic acid transporter activity" evidence=IDA

TAIR|locus:2205769 AT1G27040 [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 124/340 (36%), Positives = 190/340 (55%)

Query:     3 DKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG 62
             +K A   + GG  A +FV  +  LEN+ F+AN  ++VLY KN MH  +A +S+ +T F  
Sbjct:    20 NKAALRGRHGGMLAASFVLAVEILENLAFLANASNLVLYLKNFMHMSLARSSSEVTTFMA 79

Query:    63 STFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLK-- 120
             + FLL L+GGF++D + S F   L+  ++E L L++LTIQA   SL PP C  S+ L+  
Sbjct:    80 TAFLLALLGGFLADAFFSTFVIFLISASIEFLGLILLTIQARRPSLMPPPCKSSAALRCE 139

Query:   121 ---GAIAAXXXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL 177
                G+ AA                +G+LP+ GA QFDE  PKG K  +++FN+Y+F  + 
Sbjct:   140 VVGGSKAAFLFVGLYLVSLGIGGIKGSLPSHGAEQFDEGTPKGRKQRSTFFNYYVFCLSC 199

Query:   178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVI 237
              A++ VT +V++  ++GW  GF +S+++  + ++   +G  FY+ + P  SPL  + +V+
Sbjct:   200 GALVAVTFVVWIEDNKGWEWGFGVSTISIFLSILVFLLGSRFYKNKIPRGSPLTTIFKVL 259

Query:   238 VVA-IKNRKLSLPDNPEELYEINKIERVGTEERIPH---TNQFRCLDKAAIVPKDSTAAA 293
             + A I +       N     E+   E    EE+ P    TN   CL+KA     +     
Sbjct:   260 LAASIVSCSSKTSSNHFTSREVQS-EH---EEKTPSQSLTNSLTCLNKAI----EGKTHH 311

Query:   294 PWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
              W  CTV QVE+VKI+ +M+PI   TI++N CLAQL T S
Sbjct:   312 IWLECTVQQVEDVKIVLKMLPIFGCTIMLNCCLAQLSTYS 351

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006857 "oligopeptide transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2008855 NRT1.1 "nitrate transporter 1.1" [Arabidopsis thaliana (taxid:3702)]

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 117/341 (34%), Positives = 184/341 (53%)

Query:    12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVG 71
             GG+ +   +  + A+E +  +  G+++V Y    MH   A A+NT+TNF G++F+LCL+G
Sbjct:    29 GGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLG 88

Query:    72 GFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG---KSSC--LKGAIAAX 126
             GFI+DT+L R+ T  +F  ++   + +LT+      L PP C     S C    G     
Sbjct:    89 GFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTV 148

Query:   127 XXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186
                            + ++   G+ QFDE +PK    +  +FN + F   + +++ VT +
Sbjct:   149 LYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVL 208

Query:   187 VYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246
             VYV  D G   G+ I + A ++ L     G   YR ++   SP+ +VA VIV A +NRKL
Sbjct:   209 VYVQDDVGRKWGYGICAFAIVLALSVFLAGTNRYRFKKLIGSPMTQVAAVIVAAWRNRKL 268

Query:   247 SLPDNPEELYEINKIERV-GT---EERIPHTNQFRCLDKAAIVPKDSTAAA----PWRVC 298
              LP +P  LY+++ I    G+   ++++PHT QFR LDKAAI  +++   +     W + 
Sbjct:   269 ELPADPSYLYDVDDIIAAEGSMKGKQKLPHTEQFRSLDKAAIRDQEAGVTSNVFNKWTLS 328

Query:   299 TVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQES 339
             T+T VEEVK + RM+PI A+ I+  T  AQL TLS    E+
Sbjct:   329 TLTDVEEVKQIVRMLPIWATCILFWTVHAQLTTLSVAQSET 369

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010167 "response to nitrate" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0015706 "nitrate transport" evidence=IMP;RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0052541 "plant-type cell wall cellulose metabolic process" evidence=RCA

GO:0052546 "cell wall pectin metabolic process" evidence=RCA

GO:0015112 "nitrate transmembrane transporter activity" evidence=IMP

TAIR|locus:2018032 PTR6 "peptide transporter 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 111/334 (33%), Positives = 180/334 (53%)

Query:     9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLC 68
             K+ G ++AC F+      E + +     +++ Y+ +E+H     A++ +  + G+ ++  
Sbjct:    51 KKTGNWKACPFILGNECCERLAYYGIAKNLITYYTSELHESNVSAASDVMIWQGTCYITP 110

Query:    69 LVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC-GKSSCL-KGAIAAX 126
             L+G  I+D+Y  R+ T   F  +  + + +LT+ A    L P  C G ++ L   A    
Sbjct:   111 LIGAVIADSYWGRYWTIASFSAIYFIGMALLTLSASLPVLKPAACAGVAAALCSPATTVQ 170

Query:   127 XXXXXXXXXXXXXXNRGTLPAL---GAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV 183
                             G  P +   GA QFD+ DP+     AS+FN++ F+  + + I  
Sbjct:   171 YAVFFTGLYLIALGTGGIKPCVSSFGADQFDDTDPRERVRKASFFNWFYFSINIGSFISS 230

Query:   184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN 243
             T +V+V  + GW LGFLI +V   + + +  IG P YR Q+PG SP+ RV QV+V A + 
Sbjct:   231 TLLVWVQENVGWGLGFLIPTVFMGVSIASFFIGTPLYRFQKPGGSPITRVCQVLVAAYRK 290

Query:   244 RKLSLPDNPEELYEIN-KIERVGTEERIPHTNQFRCLDKAAIVPK-DSTAAA---PWRVC 298
              KL+LP++   LYE   K   +    +I HT+ ++ LDKAA++ + +S + A   PW++C
Sbjct:   291 LKLNLPEDISFLYETREKNSMIAGSRKIQHTDGYKFLDKAAVISEYESKSGAFSNPWKLC 350

Query:   299 TVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
             TVTQVEEVK L RM PI AS I+ +   +Q+ TL
Sbjct:   351 TVTQVEEVKTLIRMFPIWASGIVYSVLYSQISTL 384

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0009705 "plant-type vacuole membrane" evidence=IDA

TAIR|locus:2181655 AT5G13400 [Arabidopsis thaliana (taxid:3702)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 119/344 (34%), Positives = 179/344 (52%)

Query:     2 GDKVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF 61
             G  +A + + GG+ A  F+F     E M +    ++MV +    MH     +SN + NF 
Sbjct:    56 GKPIANLSKTGGWIAAFFIFGNEMAERMAYFGLSVNMVAFMFYVMHRPFESSSNAVNNFL 115

Query:    62 GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPP--DCGKSSCL 119
             G +    ++GGF++D YL R+ T  +F T+ ++ L+ +T+ A  K   P   +CG+ S L
Sbjct:   116 GISQASSVLGGFLADAYLGRYWTIAIFTTMYLVGLIGITLGASLKMFVPDQSNCGQLSLL 175

Query:   120 KG----AIAAXXXXXXXXXXXXXXXNRGTLPAL---GAGQFDENDPKGAKALASYFNFYL 172
              G    A +                  G  P +   GA QFDE        L  +FNF+ 
Sbjct:   176 LGNCEEAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDEKSKDYKTHLDRFFNFFY 235

Query:   173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVR 232
              + TL A+I  T +VYV ++ GW + F   +VA  I       G P YR + PG SPL R
Sbjct:   236 LSVTLGAIIAFTLVVYVQMELGWGMAFGTLAVAMGISNALFFAGTPLYRHRLPGGSPLTR 295

Query:   233 VAQVIVVAIKNRKLSLPDNPE-ELYEINKIER-VGTEERIPHTNQFRCLDKAAI-VPKDS 289
             VAQV+V A + R  +   +    LYE+  ++  +    +IPH+N F  LDKAA+ + +D 
Sbjct:   296 VAQVLVAAFRKRNAAFTSSEFIGLYEVPGLKSAINGSRKIPHSNDFIWLDKAALELKEDG 355

Query:   290 TAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
                +PW++CTVTQVEEVKIL R++PI   TI+++  L +  TLS
Sbjct:   356 LEPSPWKLCTVTQVEEVKILIRLIPIPTCTIMLSLVLTEYLTLS 399

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2080235 PTR1 "peptide transporter 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
 Identities = 103/331 (31%), Positives = 178/331 (53%)

Query:     9 KQK-GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLL 67
             K+K G ++AC F+      E + +   G ++V Y ++ ++   A A+N +TN+ G+ ++ 
Sbjct:    22 KEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYIT 81

Query:    68 CLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI-AAX 126
              L+G FI+D YL R+ T   F  + V  + +LT+ A    L P +C   +C   +   A 
Sbjct:    82 PLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQTAV 141

Query:   127 XXXXXXXXXXXXXXNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186
                            +  + + GA QFDEND       +S+FN++ F+  + A+I  T +
Sbjct:   142 FFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVL 201

Query:   187 VYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246
             V++ ++ GW  GF + +VA +I +     G  FYR+Q+PG SPL R+ QVIV A +   +
Sbjct:   202 VWIQMNVGWGWGFGVPTVAMVIAVCFFFFGSRFYRLQRPGGSPLTRIFQVIVAAFRKISV 261

Query:   247 SLPDNPEELYEINKIE-RVGTEERIPHTNQFRCLDKAAIVPK-DSTAAA---PWRVCTVT 301
              +P++   L+E    E  +    ++ HT+  +  DKAA+  + DS       PWR+C+VT
Sbjct:   262 KVPEDKSLLFETADDESNIKGSRKLVHTDNLKFFDKAAVESQSDSIKDGEVNPWRLCSVT 321

Query:   302 QVEEVKILARMMPILASTIIMNTCLAQLQTL 332
             QVEE+K +  ++P+ A+ I+  T  +Q+ T+
Sbjct:   322 QVEELKSIITLLPVWATGIVFATVYSQMSTM 352

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0042936 "dipeptide transporter activity" evidence=IGI;IDA

GO:0042937 "tripeptide transporter activity" evidence=IDA

GO:0042938 "dipeptide transport" evidence=IDA

GO:0042939 "tripeptide transport" evidence=IDA

GO:0006807 "nitrogen compound metabolic process" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0015824 "proline transport" evidence=RCA

GO:0015996 "chlorophyll catabolic process" evidence=RCA

TAIR|locus:2043803 AT2G26690 [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 111/337 (32%), Positives = 176/337 (52%)

Query:     9 KQK-GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLL 67
             K K GG+     +  +  +E +  +   +++V Y    MH   + ++N +T+F G++FLL
Sbjct:    22 KSKTGGWITAALILGIEVVERLSTMGIAVNLVTYLMETMHLPSSTSANIVTDFMGTSFLL 81

Query:    68 CLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAXX 127
             CL+GGF++D++L RF T  +F T++ L    L +      L PP C        A A   
Sbjct:    82 CLLGGFLADSFLGRFKTIGIFSTIQALGTGALAVATKLPELRPPTCHHGEACIPATAFQM 141

Query:   128 XXXXXXXXXXXXXNRG---TLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT 184
                            G   ++   G+ QFD+ DPK    +A +FN + F  ++  ++ VT
Sbjct:   142 TILYVSLYLIALGTGGLKSSISGFGSDQFDDKDPKEKAHMAFFFNRFFFFISMGTLLAVT 201

Query:   185 AIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNR 244
              +VY+  + G    + I +V+  I ++    G   YR ++   SP+V++ QVI  A + R
Sbjct:   202 VLVYMQDEVGRSWAYGICTVSMAIAIVIFLCGTKRYRYKKSQGSPVVQIFQVIAAAFRKR 261

Query:   245 KLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPK-------DSTAAA-PWR 296
             K+ LP +   LYE N  E +    RI HT+QF  LDKAAIV +       D  A   PW+
Sbjct:   262 KMELPQSIVYLYEDNP-EGI----RIEHTDQFHLLDKAAIVAEGDFEQTLDGVAIPNPWK 316

Query:   297 VCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLS 333
             + +VT+VEEVK++ R++PI A+TII  T  AQ+ T S
Sbjct:   317 LSSVTKVEEVKMMVRLLPIWATTIIFWTTYAQMITFS 353

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006857 "oligopeptide transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2150124 PTR5 "peptide transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 105/338 (31%), Positives = 177/338 (52%)

Query:     4 KVAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGS 63
             K A   + G ++AC F+      E + +     +++ Y + +M+ +   AS +++N+ G+
Sbjct:    19 KPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGT 78

Query:    64 TFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI 123
              +   L+G FI+D YL R+ T   F  + +  + +LTI A    L  P C   +C   A 
Sbjct:    79 CYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGL-TPTCSGETC--HAT 135

Query:   124 AAXXXXXXXXXXXXXXXNRGTLPAL---GAGQFDENDPKGAKALASYFNFYLFATTLAAM 180
             A                  G  P +   GA QFD+ D K  ++ +S+FN++ F   + AM
Sbjct:   136 AGQTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAM 195

Query:   181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVA 240
             I  + +V++ ++ GW  G  + +VA  I ++    G  FYR+Q+PG SPL R+ QVIV +
Sbjct:   196 IASSVLVWIQMNVGWGWGLGVPTVAMAIAVVFFFAGSNFYRLQKPGGSPLTRMLQVIVAS 255

Query:   241 IKNRKLSLPDNPEELYEINKIER--VGTEERIPHTNQFRCLDKAAI-VPKDSTAAAP--- 294
              +  K+ +P++   LYE    E   +G+  ++ HT      DKAA+    D+  AA    
Sbjct:   256 CRKSKVKIPEDESLLYENQDAESSIIGSR-KLEHTKILTFFDKAAVETESDNKGAAKSSS 314

Query:   295 WRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
             W++CTVTQVEE+K L R++PI A+ I+  +  +Q+ T+
Sbjct:   315 WKLCTVTQVEELKALIRLLPIWATGIVFASVYSQMGTV 352

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006857 "oligopeptide transport" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IMP

GO:0042936 "dipeptide transporter activity" evidence=IDA

GO:0042938 "dipeptide transport" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00022502001 SubName- Full=Chromosome chr14 scaffold_27, whole genome shotgun sequence; (590 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	346
pfam00854	372	pfam00854, PTR2, POT family	3e-25
TIGR00926	641	TIGR00926, 2A1704, Peptide:H+ symporter (also tran	6e-12
COG3104	498	COG3104, PTR2, Dipeptide/tripeptide permease [Amin	3e-08
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	0.002

>gnl|CDD|216153 pfam00854, PTR2, POT family

 Score =  103 bits (260), Expect = 3e-25
 Identities = 67/256 (26%), Positives = 105/256 (41%), Gaps = 25/256 (9%)

Query: 82  FATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGN 141
           F T L+   +  +  V+LT+ A   SL P              A FY  LYL +LG GG 
Sbjct: 1   FKTILLGSIIYAIGHVLLTLGAIPPSLSP-----------VQVALFYIGLYLIALGTGGI 49

Query: 142 RGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI 201
           +  + A GA QFDE           +F+++ F+    ++I      Y+  + G+ LGF +
Sbjct: 50  KPNVSAFGADQFDETQDP---RRDGFFSWFYFSINAGSLIATIITPYLQQNVGYPLGFGL 106

Query: 202 SSVATLIGLIALAIGKPFYRIQQPGES--PLVRVAQVIVVAIKNRKLSLPDNPEELYE-I 258
            +V  L+ L+   +G   Y+ + P       V +A +I  A KNRKL LP +   LY  +
Sbjct: 107 PAVGMLLALLVFLLGSRRYKKKAPPGGSPFTVCIAFIITAAGKNRKLQLPKDSHWLYWAL 166

Query: 259 NKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILAS 318
            K  +    +   HT     +                       V  ++ +  M+PI A 
Sbjct: 167 EKYNKRSISQTKVHTR-VAVIFIPLPKFWALF-------DQQGSVWLLQAILLMLPIWAF 218

Query: 319 TIIMNTCLAQLQTLSD 334
            I+ +    QL TL  
Sbjct: 219 WILPDQMWTQLATLIV 234

The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters. Length = 372

>gnl|CDD|233190 TIGR00926, 2A1704, Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

 Score = 66.3 bits (162), Expect = 6e-12
 Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 21/214 (9%)

Query: 38  MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97
           +VLY  N + ++   A+N    F    +L  L+G  I+D++L +F T L    + V+   
Sbjct: 10  LVLYLLNFLGWNEDTATNIYHTFTYLCYLTPLIGALIADSWLGKFKTILYLSLVYVVGHA 69

Query: 98  MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND 157
           + ++ A     HP     +  L G             +L   G  G  P + A   D+ +
Sbjct: 70  LASLGAVPSLGHPLH--DALSLVG------------LALIALGTGGIKPCVSAFGGDQFE 115

Query: 158 PKGAKALASYFNFYLFATTLAAMIGVT------AIVYVFIDQG-WWLGFLISSVATLIGL 210
            +       +F+F+ FA    ++            V  F  Q  + L F +  +   + L
Sbjct: 116 ERQLSLRFRFFSFFYFAINAGSLFSTIITPILRGDVGCFGCQDCFPLAFGVPGILMTLAL 175

Query: 211 IALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNR 244
           I  ++G   Y+ + P  + + +V + IV A+K R
Sbjct: 176 IVFSMGSKMYKKKPPVGNIVSKVMKCIVFALKKR 209

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 641

>gnl|CDD|225646 COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]

 Score = 54.6 bits (132), Expect = 3e-08
 Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 21/183 (11%)

Query: 38  MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV 97
           +     + + FD   A+   + +    +L  ++GG+++D  L    T ++   L  +  +
Sbjct: 48  LYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHL 107

Query: 98  MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND 157
           +L I            G             Y  L L  +G G  +  + +L    + ++D
Sbjct: 108 VLAI--------SSVSGPGG---------LYIGLALIIVGTGLFKPNISSLLGELYPKDD 150

Query: 158 PKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK 217
           P+        F  +     + ++I       + I+ GW +GF +++V  +IGL+   +G+
Sbjct: 151 PRRDGG----FTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206

Query: 218 PFY 220
              
Sbjct: 207 RHV 209

Length = 498

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 41/202 (20%), Positives = 69/202 (34%), Gaps = 25/202 (12%)

Query: 14  FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGF 73
            R    + +   L + G+      + LY +  +    A A   L+ F     L  L+GG 
Sbjct: 174 LRLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233

Query: 74  ISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYL 133
           +SD  L R    L+ G L  L+ + L + A + SL                A    +L L
Sbjct: 234 LSD-RLGRRRLLLLIGLL--LAALGLLLLALAPSL----------------ALLLVALLL 274

Query: 134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ 193
              G G     L  L +           +A  +    +    +L   +G      +    
Sbjct: 275 LGFGLGFAFPALLTLASELA------PPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG 328

Query: 194 GWWLGFLISSVATLIGLIALAI 215
           G+   FLI +   L+  + L +
Sbjct: 329 GYGGVFLILAALALLAALLLLL 350

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	346
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	100.0
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	100.0
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	100.0
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.97
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.97
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.96
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	99.96
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.95
KOG1330	493	consensus Sugar transporter/spinster transmembrane	99.69
PRK10054	395	putative transporter; Provisional	99.66
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.62
PRK12382	392	putative transporter; Provisional	99.62
PRK03545	390	putative arabinose transporter; Provisional	99.61
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.61
TIGR00900	365	2A0121 H+ Antiporter protein.	99.59
TIGR00891	405	2A0112 putative sialic acid transporter.	99.58
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.58
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.58
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.57
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.57
PRK10504	471	putative transporter; Provisional	99.57
PRK05122	399	major facilitator superfamily transporter; Provisi	99.56
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.56
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.55
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.54
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.53
PRK11663	434	regulatory protein UhpC; Provisional	99.53
PRK12307	426	putative sialic acid transporter; Provisional	99.52
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.5
PRK10091	382	MFS transport protein AraJ; Provisional	99.5
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.5
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.5
PRK03893	496	putative sialic acid transporter; Provisional	99.49
TIGR00895	398	2A0115 benzoate transport.	99.49
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.49
PRK10133	438	L-fucose transporter; Provisional	99.48
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.48
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.48
TIGR00805	633	oat sodium-independent organic anion transporter.	99.47
PRK11043	401	putative transporter; Provisional	99.47
PRK03699	394	putative transporter; Provisional	99.47
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.47
TIGR00893	399	2A0114 d-galactonate transporter.	99.46
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.46
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.46
PRK09705	393	cynX putative cyanate transporter; Provisional	99.46
PRK09874	408	drug efflux system protein MdtG; Provisional	99.46
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.45
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.44
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.43
PRK03633	381	putative MFS family transporter protein; Provision	99.43
PRK15011	393	sugar efflux transporter B; Provisional	99.43
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.42
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.42
PRK10489	417	enterobactin exporter EntS; Provisional	99.41
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.4
PRK09528	420	lacY galactoside permease; Reviewed	99.4
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.4
PRK03699	394	putative transporter; Provisional	99.4
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.4
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.39
PLN00028	476	nitrate transmembrane transporter; Provisional	99.39
PRK10642	490	proline/glycine betaine transporter; Provisional	99.39
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.38
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.36
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.36
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.35
PRK15011	393	sugar efflux transporter B; Provisional	99.35
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.34
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.34
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.33
PRK10642	490	proline/glycine betaine transporter; Provisional	99.33
PRK05122	399	major facilitator superfamily transporter; Provisi	99.33
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.32
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.32
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.31
PRK09952	438	shikimate transporter; Provisional	99.31
PRK15075	434	citrate-proton symporter; Provisional	99.3
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.29
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.29
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.28
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.28
PRK09705	393	cynX putative cyanate transporter; Provisional	99.28
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.28
PRK09952	438	shikimate transporter; Provisional	99.27
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.27
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.26
TIGR00898	505	2A0119 cation transport protein.	99.25
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.25
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.24
TIGR00901	356	2A0125 AmpG-related permease.	99.23
PRK11902	402	ampG muropeptide transporter; Reviewed	99.23
PRK09874	408	drug efflux system protein MdtG; Provisional	99.22
PRK11010	491	ampG muropeptide transporter; Validated	99.22
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.21
KOG3764	464	consensus Vesicular amine transporter [Intracellul	99.2
TIGR00891	405	2A0112 putative sialic acid transporter.	99.2
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.2
PRK03545	390	putative arabinose transporter; Provisional	99.19
PRK03893	496	putative sialic acid transporter; Provisional	99.19
PRK11663	434	regulatory protein UhpC; Provisional	99.19
PRK03633	381	putative MFS family transporter protein; Provision	99.19
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.19
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.18
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.18
PRK12382	392	putative transporter; Provisional	99.18
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.18
TIGR00893	399	2A0114 d-galactonate transporter.	99.17
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.17
PRK10489	417	enterobactin exporter EntS; Provisional	99.17
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.15
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.14
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.14
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.14
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.13
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.13
PRK09528	420	lacY galactoside permease; Reviewed	99.12
KOG2532	466	consensus Permease of the major facilitator superf	99.11
PRK11010	491	ampG muropeptide transporter; Validated	99.11
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.11
PRK09669	444	putative symporter YagG; Provisional	99.1
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.1
PRK15075	434	citrate-proton symporter; Provisional	99.09
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.09
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.09
KOG0254	513	consensus Predicted transporter (major facilitator	99.09
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.08
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.07
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.07
PTZ00207	591	hypothetical protein; Provisional	99.05
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.05
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.05
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.03
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.03
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.03
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.02
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	99.02
PRK10504	471	putative transporter; Provisional	99.01
PRK10429	473	melibiose:sodium symporter; Provisional	99.01
PRK10091	382	MFS transport protein AraJ; Provisional	99.0
PLN00028	476	nitrate transmembrane transporter; Provisional	99.0
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	98.99
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	98.97
PRK11462	460	putative transporter; Provisional	98.97
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	98.96
TIGR00900	365	2A0121 H+ Antiporter protein.	98.96
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	98.95
PRK09848	448	glucuronide transporter; Provisional	98.94
PRK10133	438	L-fucose transporter; Provisional	98.94
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.94
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	98.93
PRK12307	426	putative sialic acid transporter; Provisional	98.93
PRK14995	495	methyl viologen resistance protein SmvA; Provision	98.93
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	98.92
PRK11902	402	ampG muropeptide transporter; Reviewed	98.91
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	98.91
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	98.89
PRK09848	448	glucuronide transporter; Provisional	98.89
TIGR00895	398	2A0115 benzoate transport.	98.88
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	98.87
TIGR00896	355	CynX cyanate transporter. This family of proteins	98.87
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	98.87
PRK10077	479	xylE D-xylose transporter XylE; Provisional	98.86
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	98.86
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.85
PRK10213	394	nepI ribonucleoside transporter; Reviewed	98.85
PF13347	428	MFS_2: MFS/sugar transport protein	98.84
PRK10054	395	putative transporter; Provisional	98.83
PF13347	428	MFS_2: MFS/sugar transport protein	98.82
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	98.81
PRK10429	473	melibiose:sodium symporter; Provisional	98.79
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	98.78
PRK11646	400	multidrug resistance protein MdtH; Provisional	98.74
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	98.73
PRK09669	444	putative symporter YagG; Provisional	98.72
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	98.72
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	98.71
TIGR00901	356	2A0125 AmpG-related permease.	98.7
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	98.7
KOG2532	466	consensus Permease of the major facilitator superf	98.7
TIGR00898	505	2A0119 cation transport protein.	98.69
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	98.67
KOG2533	495	consensus Permease of the major facilitator superf	98.65
PRK11043	401	putative transporter; Provisional	98.65
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	98.64
COG2270	438	Permeases of the major facilitator superfamily [Ge	98.64
KOG0569	485	consensus Permease of the major facilitator superf	98.64
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	98.59
KOG2615	451	consensus Permease of the major facilitator superf	98.58
PRK11195	393	lysophospholipid transporter LplT; Provisional	98.58
COG2211	467	MelB Na+/melibiose symporter and related transport	98.58
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	98.57
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.55
PRK10473	392	multidrug efflux system protein MdtL; Provisional	98.55
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	98.54
KOG2504	509	consensus Monocarboxylate transporter [Carbohydrat	98.52
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	98.5
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	98.42
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	98.41
KOG0569	485	consensus Permease of the major facilitator superf	98.4
PRK11462	460	putative transporter; Provisional	98.38
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	98.33
PRK11652	394	emrD multidrug resistance protein D; Provisional	98.32
COG2211	467	MelB Na+/melibiose symporter and related transport	98.29
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	98.27
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	98.23
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	98.14
KOG2816	463	consensus Predicted transporter ADD1 (major facili	98.13
PRK15403	413	multidrug efflux system protein MdtM; Provisional	98.11
KOG2325	488	consensus Predicted transporter/transmembrane prot	98.02
KOG3626	735	consensus Organic anion transporter [Secondary met	98.0
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	97.98
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	97.96
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	97.95
KOG2533	495	consensus Permease of the major facilitator superf	97.93
KOG2563	480	consensus Permease of the major facilitator superf	97.92
PRK10207	489	dipeptide/tripeptide permease B; Provisional	97.92
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	97.91
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	97.9
PF12832	77	MFS_1_like: MFS_1 like family	97.89
COG0477	338	ProP Permeases of the major facilitator superfamil	97.84
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	97.76
KOG0253	528	consensus Synaptic vesicle transporter SV2 (major	97.75
PRK09584	500	tppB putative tripeptide transporter permease; Rev	97.74
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	97.57
TIGR00788	468	fbt folate/biopterin transporter. The only functio	97.55
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	97.39
KOG3764	464	consensus Vesicular amine transporter [Intracellul	97.38
KOG4686	459	consensus Predicted sugar transporter [Carbohydrat	97.37
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	97.36
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	97.36
PTZ00207	591	hypothetical protein; Provisional	97.33
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	97.26
KOG0637	498	consensus Sucrose transporter and related proteins	96.96
TIGR00805	633	oat sodium-independent organic anion transporter.	96.83
KOG0254	513	consensus Predicted transporter (major facilitator	96.72
KOG0252	538	consensus Inorganic phosphate transporter [Inorgan	96.62
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	96.58
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	96.55
COG2270	438	Permeases of the major facilitator superfamily [Ge	96.44
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	96.43
PRK03612	521	spermidine synthase; Provisional	96.42
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	96.4
KOG2563	480	consensus Permease of the major facilitator superf	96.25
KOG2816	463	consensus Predicted transporter ADD1 (major facili	96.12
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	96.0
PRK15462	493	dipeptide/tripeptide permease D; Provisional	95.94
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	95.71
KOG3762	618	consensus Predicted transporter [General function	95.7
KOG2615	451	consensus Permease of the major facilitator superf	95.25
KOG0255	521	consensus Synaptic vesicle transporter SVOP and re	95.25
KOG3762	618	consensus Predicted transporter [General function	94.8
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	94.66
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	93.24
KOG3098	461	consensus Uncharacterized conserved protein [Funct	92.23
KOG3626	735	consensus Organic anion transporter [Secondary met	91.6
KOG3098	461	consensus Uncharacterized conserved protein [Funct	91.58
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	89.46
KOG3574	510	consensus Acetyl-CoA transporter [Inorganic ion tr	88.6
KOG1330	493	consensus Sugar transporter/spinster transmembrane	88.51
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	88.19
KOG3097	390	consensus Predicted membrane protein [Function unk	88.04
KOG4332	454	consensus Predicted sugar transporter [Carbohydrat	85.18
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	83.76
KOG1237	571	consensus H+/oligopeptide symporter [Amino acid tr	81.9

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=100.00  E-value=8.3e-58  Score=455.88  Aligned_cols=330  Identities=38%  Similarity=0.612  Sum_probs=302.1

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      ++|+|+++.++++.|.+||+++||+..|++.|++.++|.+..+|+..++.|.+..++.|++||++||.|+|||++|.+++
T Consensus        32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s  111 (571)
T KOG1237|consen   32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS  111 (571)
T ss_pred             eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCC----CCCCCCC--chhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhh
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDC----GKSSCLK--GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKA  163 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~----~~~~~~~--~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~  163 (346)
                      +++.+|..++++++.+|.+.|+.|    ..+.|+.  ..+...++.+++++++|.|+.+||+.++++|||++.+++++..
T Consensus       112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~  191 (571)
T KOG1237|consen  112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG  191 (571)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence            999999999999999999999887    1134655  5678899999999999999999999999999999988888888


Q ss_pred             hhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHh
Q 019064          164 LASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKN  243 (346)
Q Consensus       164 ~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~  243 (346)
                      +.++|||+|+..|+|.+++.++..|+|++.||.++|.++++++++++++|+.+.+.|++++|.|+|++++++|++++.|+
T Consensus       192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k  271 (571)
T KOG1237|consen  192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK  271 (571)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCC----CCCCCcccCCchhHHHHHHHHhHhHHHhhh
Q 019064          244 RKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDS----TAAAPWRVCTVTQVEEVKILARMMPILAST  319 (346)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~----~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~  319 (346)
                      ++.+.+.+++++ +    +...+....+++++++++|||+.+..++    ...+||++|+++||||+|.++|++|+|++.
T Consensus       272 ~~~~~~~~~~~~-~----~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~~  346 (571)
T KOG1237|consen  272 RKAVVSLDPEEL-Y----YDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLTT  346 (571)
T ss_pred             HhccCCCcchhc-c----ccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHHH
Confidence            988887664443 1    1112233456688999999999876542    245799999999999999999999999999


Q ss_pred             HHHHHHHhcccchhhhccccccCCC
Q 019064          320 IIMNTCLAQLQTLSDTPQESHSFSA  344 (346)
Q Consensus       320 i~~~~~~~q~~t~~~~Q~~~m~~~~  344 (346)
                      ++||++++|++|++++||..||.+.
T Consensus       347 i~~~~~~aq~~t~~v~Q~~~mdr~~  371 (571)
T KOG1237|consen  347 IIYSTVYAQMVTFFVLQATTMDRHL  371 (571)
T ss_pred             HHHHHHHHhhhhheehhhhhcCCCC
Confidence            9999999999999999999999764

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=100.00  E-value=2.2e-40  Score=336.10  Aligned_cols=267  Identities=21%  Similarity=0.313  Sum_probs=232.9

Q ss_pred             HHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCC
Q 019064           29 MGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSL  108 (346)
Q Consensus        29 ~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~  108 (346)
                      ++|||+..++++|+++.+|++.++++.+.+.|...++++|++||++||+++||++++.++.+++.+|++++++.+. |..
T Consensus         1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~   79 (654)
T TIGR00926         1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS   79 (654)
T ss_pred             CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence            5799999999999999999999999999999999999999999999999999999999999999999999988653 321


Q ss_pred             CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 019064          109 HPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~  188 (346)
                      ..          ......+++++.++++|.|++|||+.++++||++++++   +++.++|+|+|+++|+|+++++++.++
T Consensus        80 ~~----------~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~  146 (654)
T TIGR00926        80 GH----------PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPI  146 (654)
T ss_pred             cc----------chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            10          12345678999999999999999999999999986543   347999999999999999999999999


Q ss_pred             hhhcc-------chhHHHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHhccCCCCCCCchhhhhhhh
Q 019064          189 VFIDQ-------GWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKI  261 (346)
Q Consensus       189 i~~~~-------g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~~~~~~~~~~~~  261 (346)
                      +++++       +|..+|+++++++++++++++.++++|++++|.++++.++.++++.++|+++.....           
T Consensus       147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~-----------  215 (654)
T TIGR00926       147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE-----------  215 (654)
T ss_pred             HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc-----------
Confidence            98553       699999999999999999999999999998999999999999999998875432110           


Q ss_pred             cccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHhhhHHHHHHHhcccchhhhcccccc
Q 019064          262 ERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHS  341 (346)
Q Consensus       262 ~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~i~~~~~~~q~~t~~~~Q~~~m~  341 (346)
                                + ...+|+|+|++++            .+++|||+|++++++|+|++.++||++++|+.|+++.|+++|+
T Consensus       216 ----------~-~~~~~ld~a~~~~------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~  272 (654)
T TIGR00926       216 ----------H-WPLHWLDYAKDKH------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMD  272 (654)
T ss_pred             ----------c-cchhHHHHhcccc------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhc
Confidence                      0 1147888887543            3579999999999999999999999999999999999999997


Q ss_pred             CC
Q 019064          342 FS  343 (346)
Q Consensus       342 ~~  343 (346)
                      .+
T Consensus       273 ~~  274 (654)
T TIGR00926       273 GD  274 (654)
T ss_pred             Cc
Confidence            54

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=100.00  E-value=4.8e-39  Score=308.18  Aligned_cols=287  Identities=18%  Similarity=0.301  Sum_probs=224.6

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccC----CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMH----FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC   85 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg----~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i   85 (346)
                      .-++||.++.++.+|++|||+|||++..+..|++.+++    ++.++|..+.+.|....|++|++|||+|||++|+|||+
T Consensus        16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI   95 (498)
T COG3104          16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI   95 (498)
T ss_pred             cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence            33789999999999999999999999999999999888    99999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064           86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA  165 (346)
Q Consensus        86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~  165 (346)
                      ..+.+++.+|+++++..+    .             .....+++++.++++|.|++|||++++++|+++++||+    |+
T Consensus        96 ~lGail~~iGh~~L~~~~----~-------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr----rD  154 (498)
T COG3104          96 VLGAILMAIGHLVLAISS----V-------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR----RD  154 (498)
T ss_pred             HHHHHHHHHHHHHHhccc----c-------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc----cC
Confidence            999999999999998753    0             13567999999999999999999999999999999986    78


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecC--CCCCcchh------HHHHH
Q 019064          166 SYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQ--PGESPLVR------VAQVI  237 (346)
Q Consensus       166 ~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~--p~gs~l~~------i~~v~  237 (346)
                      ..|+.+|.++|+|+++++.+.+++++++||..+|.++++.|.+++++++++++++...+  |..+|++.      ...++
T Consensus       155 ~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (498)
T COG3104         155 GGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLV  234 (498)
T ss_pred             CCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999998876543  23333211      11111


Q ss_pred             HHHHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHh
Q 019064          238 VVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILA  317 (346)
Q Consensus       238 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~  317 (346)
                      +..+.--.       ..+...++-+.....--+....  -.+-++          -+   .++.+ ||.|++++++|+|+
T Consensus       235 ~~~~~~~~-------~~~l~~~~~~~~~~~~~i~~~~--~~~~~~----------~~---~~~~~-~er~r~~~~~~Lfl  291 (498)
T COG3104         235 VMILAALL-------TLLLNQNTFSGVLLVISILIAI--IYFAEA----------FR---SPKVF-DERRRLLAAIPLFL  291 (498)
T ss_pred             HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHH--HHHHHH----------hc---cCccH-HHHHHHHHHHHHHH
Confidence            11111000       0000000000000000000000  000000          01   12345 89999999999999


Q ss_pred             hhHHHHHHHhcccchhhhccccc
Q 019064          318 STIIMNTCLAQLQTLSDTPQESH  340 (346)
Q Consensus       318 ~~i~~~~~~~q~~t~~~~Q~~~m  340 (346)
                      +.++||++|+|+.|++..|+.+|
T Consensus       292 ~~~iFW~~~~Q~~ssl~~~a~~~  314 (498)
T COG3104         292 FAVIFWALYEQMGSSLNLYADRN  314 (498)
T ss_pred             HHHHHHHHHHhccchHHHHHHHh
Confidence            99999999999999999999987

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.97  E-value=1.7e-29  Score=251.02  Aligned_cols=194  Identities=14%  Similarity=0.253  Sum_probs=172.8

Q ss_pred             ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064            8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV   87 (346)
Q Consensus         8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~   87 (346)
                      ...+++||.++.+++.|++||++||++..++++|+++++|++..+++++.+.+....++.++++|+++||++||||++++
T Consensus         7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~   86 (489)
T PRK10207          7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL   86 (489)
T ss_pred             cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence            34457999999999999999999999999999999999999999999999999999999999999999997799999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      +.+++.+|.+++.++..                  ....+++++.++++|.|+++|+..++++|+|++++++    +++.
T Consensus        87 g~~~~~~g~~~~~~~~~------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~  144 (489)
T PRK10207         87 GAIVLAIGYFMTGMSLL------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGA  144 (489)
T ss_pred             HHHHHHHHHHHHHHhcc------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcc
Confidence            99999999988876531                  1234667899999999999999999999999876632    5678


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec
Q 019064          168 FNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ  223 (346)
Q Consensus       168 f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~  223 (346)
                      ++++|+++|+|+++++.+++++.+++||+++|.++++.+.++++.+..+++.+++.
T Consensus       145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~  200 (489)
T PRK10207        145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDI  200 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhccc
Confidence            99999999999999999999999999999999998888888888888877666553

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.97  E-value=5e-29  Score=246.97  Aligned_cols=198  Identities=16%  Similarity=0.247  Sum_probs=175.0

Q ss_pred             cccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccc--cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q 019064            9 KQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNE--MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL   86 (346)
Q Consensus         9 ~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~--lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~   86 (346)
                      +..++||..+.+++.|++||++||++.+++++|++++  +|++..+++.+.+.+....+++++++|+++||++|||+++.
T Consensus         4 ~~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~   83 (475)
T TIGR00924         4 TFFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV   83 (475)
T ss_pred             cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence            4457899999999999999999999999999999987  99999999999999999999999999999999669999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      ++.+++.+|.+++.++.                   +.+.+++++.+.++|.|+.+|+..++++|++++++++   +|++
T Consensus        84 ~~~~~~~~g~~~~~~~~-------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~  141 (475)
T TIGR00924        84 LGGIVLMLGHFMLAMSI-------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDG  141 (475)
T ss_pred             HHHHHHHHHHHHHHhcc-------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccc
Confidence            99999999988777642                   2456778888999999999999999999999876532   2677


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCCCCC
Q 019064          167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGES  228 (346)
Q Consensus       167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs  228 (346)
                      .++++|++.|+|+++|+.+++++.+++||+++|.++++.++++.++++..++.+++.+++++
T Consensus       142 ~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  203 (475)
T TIGR00924       142 GFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPD  203 (475)
T ss_pred             eehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCC
Confidence            89999999999999999999999999999999999988888888888888777765554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.96  E-value=1.5e-27  Score=235.33  Aligned_cols=191  Identities=20%  Similarity=0.374  Sum_probs=169.3

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      ..+|||.++.+++.|++||++||++...++.|+++.+|++..+++.+...+....+++++++|+++||++||||+++++.
T Consensus         4 ~~~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~   83 (493)
T PRK15462          4 HASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGA   83 (493)
T ss_pred             cccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHH
Confidence            34699999999999999999999999999999999999999999999999999999999999999999889999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ++..+|.+++.....                  ....+++++.++++|.|..+++..++.+|+|++++++    |.+.++
T Consensus        84 il~~lg~lll~~~~~------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~  141 (493)
T PRK15462         84 LLMAIGHVVLGASEI------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFS  141 (493)
T ss_pred             HHHHHHHHHHHHhhc------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceeh
Confidence            999999876653210                  1233566777888999999999999999999977643    678899


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI  222 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~  222 (346)
                      ++|..+|+|+.+++.+.+++.+++||+.+|.++++.+++++++++.+++.+.+
T Consensus       142 i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~  194 (493)
T PRK15462        142 LMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTH  194 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999998899999988888776644

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=99.96  E-value=2.2e-29  Score=242.08  Aligned_cols=239  Identities=30%  Similarity=0.482  Sum_probs=170.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhh
Q 019064           82 FATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGA  161 (346)
Q Consensus        82 ~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~  161 (346)
                      |||++++++++.+|++++++++. |...+         ++.+.+.++++++++++|+|++|||+.++++|||+++++   
T Consensus         1 yktI~~g~~~~~~G~~ll~l~~~-~~~~~---------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~---   67 (372)
T PF00854_consen    1 YKTILLGSIVYLLGHVLLTLSAI-PPSLP---------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD---   67 (372)
T ss_dssp             HHHHHHHHHHHHHHHHH--HHHT-SSSC---------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---
T ss_pred             CHhhhHHHHHHHHHHHHhHHHHh-cchhh---------hhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---
Confidence            69999999999999999999875 43321         245678899999999999999999999999999998742   


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec-CCCCCcchh-HHHHHHH
Q 019064          162 KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ-QPGESPLVR-VAQVIVV  239 (346)
Q Consensus       162 ~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~-~p~gs~l~~-i~~v~~~  239 (346)
                      .+++++|+|||+++|+|++++.++.+|+++++||.++|+++++.+++++++|+.++++|+++ +|.++++.+ ...++..
T Consensus        68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~  147 (372)
T PF00854_consen   68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA  147 (372)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred             hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence            34899999999999999999999999999999999999999999999999999999999988 788999888 6667777


Q ss_pred             HHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcc-cCCchhHHHHHHHHhHhHHHhh
Q 019064          240 AIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWR-VCTVTQVEEVKILARMMPILAS  318 (346)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~-~~~~~~Ve~vK~~~r~lpi~~~  318 (346)
                      +.|++....|.+...+++......   ....  .+.....+.+......   ...|. .|++++||++|.+.+.+|+|.+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~k~~~~~~~~~~~  219 (372)
T PF00854_consen  148 AFKKRKLAVPKGSSWLDWALFQYS---ERSI--FGIIVFIRAAVIFFPE---IFFWALFCQVQRVEELKALIRFLPIFLF  219 (372)
T ss_dssp             HHHHHCCCH-HHHHHHHHHHHHHC---CCCC--CCCCCHHHHHHHHCCC---HHHHTTTSSTTTHHHCCHHHCHHHCCCH
T ss_pred             HHHHhhcccccchHHHHHhhhhhh---hhhh--hhhhhhccchhhhhhh---hhhcccCCccceeeeeeeeeeccccCeE
Confidence            777766555422222222111100   0000  0110111111111110   01222 1678999999999999999999


Q ss_pred             hHHHHHHHhcccchhhhcccccc
Q 019064          319 TIIMNTCLAQLQTLSDTPQESHS  341 (346)
Q Consensus       319 ~i~~~~~~~q~~t~~~~Q~~~m~  341 (346)
                      .++|+.++.|..++++.|+.+||
T Consensus       220 ~i~~~~~~~~~~~~~~~~~~~~~  242 (372)
T PF00854_consen  220 WIFYWQMYSQLNTFFLLQVPQMD  242 (372)
T ss_dssp             HHHHHHHCTCCHHHHHHCGGGTT
T ss_pred             EEEeeehhhhhhhHHHHhccccc
Confidence            99999999999999999999995

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.95  E-value=3.6e-26  Score=227.95  Aligned_cols=280  Identities=15%  Similarity=0.233  Sum_probs=204.1

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      -+++|.++.+++.+++||++||++..+++.|+++++|++..+++.+...+....+..++++|+++||++|||+++.++.+
T Consensus        17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~   96 (500)
T PRK09584         17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI   96 (500)
T ss_pred             hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence            36788999999999999999999999999999999999999999999888888888889999999996699999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..+|..++.++.                  .....+++++.++++|.|..+++..++++|+|++++++    +++.+++
T Consensus        97 ~~~ig~~l~~~~~------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~  154 (500)
T PRK09584         97 VLAIGYALVAWSG------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTM  154 (500)
T ss_pred             HHHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchH
Confidence            9999987777642                  12345678888999999999999999999999865532    4567889


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceec--CCCCCcchh------HHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQ--QPGESPLVR------VAQVIVVAIK  242 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~--~p~gs~l~~------i~~v~~~a~~  242 (346)
                      +|++.|+|+++++.+.+++.+++||+++|.+.++.++++++.++..++.++++  +|+++|+..      ...+......
T Consensus       155 ~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (500)
T PRK09584        155 YYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAI  234 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999888888887777666555433  233333221      1111111111


Q ss_pred             hc-cCCCCCCCch-hhhhhhhcccCCccccCCCCccccccccccccCCCCCCCCcccCCchhHHHHHHHHhHhHHHhhhH
Q 019064          243 NR-KLSLPDNPEE-LYEINKIERVGTEERIPHTNQFRCLDKAAIVPKDSTAAAPWRVCTVTQVEEVKILARMMPILASTI  320 (346)
Q Consensus       243 ~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ld~a~~~~~~~~~~~~w~~~~~~~Ve~vK~~~r~lpi~~~~i  320 (346)
                      .. ..+.++.... ++-.   +            .....+..+..            +..+++ |.|+.+..+++++..+
T Consensus       235 ~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~i  286 (500)
T PRK09584        235 ATWLLHNQEIARMALGVV---A------------LGIVVIFGKEA------------FAMKGA-ARRKMIVAFILMLEAI  286 (500)
T ss_pred             HHHHHhcchHHHHHHHHH---H------------HHHHHHHHHHH------------hhcCHH-HHHHHHHHHHHHHHHH
Confidence            10 0000000000 0000   0            00000000000            112344 4555567788999999


Q ss_pred             HHHHHHhcccchhhhccccc
Q 019064          321 IMNTCLAQLQTLSDTPQESH  340 (346)
Q Consensus       321 ~~~~~~~q~~t~~~~Q~~~m  340 (346)
                      +||+++.|+.+.+..|+..+
T Consensus       287 ~f~~~~~q~~~~l~~~~~~~  306 (500)
T PRK09584        287 IFFVLYSQMPTSLNFFAIRN  306 (500)
T ss_pred             HHHHHHHHhccHHHHHHHHh
Confidence            99999999999999988653

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=99.69  E-value=5.3e-17  Score=154.86  Aligned_cols=206  Identities=13%  Similarity=0.066  Sum_probs=167.3

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      ..++.+..++++.+.|+..-|.+...+. =.++.+|.++...+.+.++|.....+..|+.|+++||| -|++++.++..+
T Consensus        30 ~~~~~l~il~~vnlmny~Dr~~iagv~~-~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~i  107 (493)
T KOG1330|consen   30 SPTLTLVILCLVNLMNYADRYTIAGVLK-EVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFI  107 (493)
T ss_pred             cchHHHHHHHHHHHHHHhhhhhhhhhhH-HHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHH
Confidence            3456788888999999999998876433 45667899999999999999999999999999999998 999999999999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      +.+.++..+.+.                   ..+.+.+.+.+.|+|.+...|..+++++|.|+++.      |++.+.|+
T Consensus       108 W~~Av~~~~fs~-------------------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~if  162 (493)
T KOG1330|consen  108 WTLAVFASGFSN-------------------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGIF  162 (493)
T ss_pred             HHHHHHHHHHHH-------------------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHHh
Confidence            999887766653                   57899999999999999999999999999999764      79999999


Q ss_pred             HHHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHH-HHHhcCccceecCC--C-----CCcchhHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLI-ALAIGKPFYRIQQP--G-----ESPLVRVAQVIVVAIK  242 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~-i~~~~~~~~~~~~p--~-----gs~l~~i~~v~~~a~~  242 (346)
                      ||++++|+.+|..+++++.+..+ ||++|.+.+++.++..+ ++++.+...+...+  +     ..|.+...|=++...|
T Consensus       163 y~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~  242 (493)
T KOG1330|consen  163 YFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAK  242 (493)
T ss_pred             hhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHc
Confidence            99999999999999999988766 99999988776655444 44444333221211  1     2356667776666666


Q ss_pred             hc
Q 019064          243 NR  244 (346)
Q Consensus       243 ~~  244 (346)
                      ++
T Consensus       243 ~~  244 (493)
T KOG1330|consen  243 IK  244 (493)
T ss_pred             cC
Confidence            54

>PRK10054 putative transporter; Provisional

Probab=99.66  E-value=4.6e-15  Score=143.75  Aligned_cols=176  Identities=13%  Similarity=0.100  Sum_probs=147.4

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +.+.+|+.+.+++..++-.++++.+.+.++.|+++++|++..+.+.+.+.+.....+..++.|+++||+ |||+++.++.
T Consensus         2 ~~~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~   80 (395)
T PRK10054          2 NLSLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAI   80 (395)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHH
Confidence            345678899999999999999999999999999999999999999999999889999999999999995 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ++..++.+++.+..                   +.+.+++.+.+.+.+.+...++..+..+|.+++++      +.+.++
T Consensus        81 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g  135 (395)
T PRK10054         81 TAFASGFIAIPLVN-------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFS  135 (395)
T ss_pred             HHHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHH
Confidence            88888877665542                   34555566667777777778888888889887432      678889


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      +.+...|+|.++++.+++++.+ .+|+..|.+.+++.+++++.
T Consensus       136 ~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~  177 (395)
T PRK10054        136 LNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVF  177 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHH
Confidence            9999999999999999998875 79999999887766665443

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.62  E-value=1.6e-14  Score=135.92  Aligned_cols=166  Identities=22%  Similarity=0.305  Sum_probs=141.7

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 019064           21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLT  100 (346)
Q Consensus        21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~  100 (346)
                      ++..++..++.......++.++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++..+..
T Consensus         2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~   80 (352)
T PF07690_consen    2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA   80 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence            4566777777777777777688899999999999999999999999999999999995 999999999999999854444


Q ss_pred             hhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHH
Q 019064          101 IQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAM  180 (346)
Q Consensus       101 l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~  180 (346)
                      ++.                   +.+.+++++++.|++.+...+...++..|.+++++      |...+++.....++|.+
T Consensus        81 ~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~  135 (352)
T PF07690_consen   81 FAS-------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI  135 (352)
T ss_dssp             HHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred             hhh-------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence            321                   34578899999999999999999999999999754      67888899999999999


Q ss_pred             HHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          181 IGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       181 i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      +++.+++++.++.+|++.|.+.++..+++.++
T Consensus       136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il  167 (352)
T PF07690_consen  136 LGPLLGGFLISYFGWRWAFLISAILSLIAAIL  167 (352)
T ss_dssp             HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhhhccccccccccccchhhhhhhh
Confidence            99999999998899999999988887777664

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK12382 putative transporter; Provisional

Probab=99.62  E-value=3.6e-14  Score=136.81  Aligned_cols=182  Identities=13%  Similarity=-0.024  Sum_probs=143.4

Q ss_pred             cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q 019064            5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT   84 (346)
Q Consensus         5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~   84 (346)
                      .+-+.|+...+..+.+....++..++.....+.++.|+.+++|.|..+.+.+.+.+.....++.++.|+++||+ ||||.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~   83 (392)
T PRK12382          5 SQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRS   83 (392)
T ss_pred             ccCcCCCcccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHH
Confidence            33344445556677777777777777777778888899999999999999999999999999999999999996 99999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064           85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL  164 (346)
Q Consensus        85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~  164 (346)
                      +.++.++..++.+...+....+...           ..+.+.+++++.+.|+|.+...+...+.+.|.+++++      |
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r  146 (392)
T PRK12382         84 ALQGMLACGLAGLAYLLAAILPVSA-----------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------S  146 (392)
T ss_pred             HHHHHHHHHHHHHHHHhhhccccch-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------c
Confidence            9998887777655443332222110           2256778899999999999888888888899987543      5


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHH
Q 019064          165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV  204 (346)
Q Consensus       165 ~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~  204 (346)
                      .+.++++..+.++|.++++.+++++.+.+||+..+.+..+
T Consensus       147 ~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~  186 (392)
T PRK12382        147 GKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMV  186 (392)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence            7778888888999999999999999888999977665444

>PRK03545 putative arabinose transporter; Provisional

Probab=99.61  E-value=3.6e-14  Score=136.91  Aligned_cols=175  Identities=15%  Similarity=0.069  Sum_probs=139.9

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+|...+.+.+..++.....+.. ..+...+.+++|.+..+.+++.+.+.....++.++.|+++||+ ||||.+.++.++
T Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~   83 (390)
T PRK03545          6 VAWLRVVTLALAAFIFNTTEFVP-VGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL   83 (390)
T ss_pred             cchHHHHHHHHHHHHHHhHHHHH-HcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence            34666666666666654444433 3333456778999999999999999988889999999999996 999999999999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++.++...+.                   +.+.+++++.+.|++.+...+...++..|.+++++      |++.++++
T Consensus        84 ~~~~~~~~~~~~-------------------~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~  138 (390)
T PRK03545         84 FIASHVLSALAW-------------------NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLL  138 (390)
T ss_pred             HHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHH
Confidence            998877766542                   46778888999999999888999999999998543      67788888


Q ss_pred             HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      ....++|..+++.+.+.+.++.||++.|.+.++..++..+..
T Consensus       139 ~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~  180 (390)
T PRK03545        139 ATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL  180 (390)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999888999999998877655554433

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.61  E-value=4.5e-14  Score=137.06  Aligned_cols=168  Identities=14%  Similarity=0.126  Sum_probs=145.5

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV   97 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~   97 (346)
                      ++++...++.+++++.+.+.++.|+++++|++..+.+.+...+.....+..+++|+++||+ |||+++.++.++..++.+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~   91 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA   91 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence            7788899999999999999999999999999999999999999999999999999999996 999999999999998887


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++....                   +.+.+++.+.+.+++.+...+...+...|.+++++      +++.+++.+...++
T Consensus        92 ~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~~~~  146 (400)
T PRK11646         92 TMAIAH-------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQDSA  146 (400)
T ss_pred             HHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence            765431                   35677888889999998888999999999887433      67888999999999


Q ss_pred             HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      |..+++.+++++. +.||++.|.+.++..++..++
T Consensus       147 g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~  180 (400)
T PRK11646        147 GAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF  180 (400)
T ss_pred             HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999998 689999998877665554443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.59  E-value=5.1e-14  Score=133.01  Aligned_cols=174  Identities=13%  Similarity=0.093  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064           19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM   98 (346)
Q Consensus        19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l   98 (346)
                      .++...++..++.......++.|.. +++.+..+.+.+.+.+.....++.++.|+++||+ ||||++.++.++..++..+
T Consensus         3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~   80 (365)
T TIGR00900         3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV   80 (365)
T ss_pred             ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence            4566777777777777777787776 4799999999999999999999999999999996 9999999999888887776


Q ss_pred             HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 019064           99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA  178 (346)
Q Consensus        99 l~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG  178 (346)
                      +......+              +.+.+.+++++.+.+++.+...+...++.+|.+++++      |.+.++++....++|
T Consensus        81 ~~~~~~~~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g  140 (365)
T TIGR00900        81 LPFVALLG--------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLF  140 (365)
T ss_pred             HHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHH
Confidence            66553211              1256788889999999999999999999999998542      678889999999999


Q ss_pred             HHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          179 AMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       179 ~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .++++.+.+++.+..||++.|.+.++..+++.+..+
T Consensus       141 ~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  176 (365)
T TIGR00900       141 YIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV  176 (365)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998889999999887766655554433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.58  E-value=8.1e-14  Score=133.78  Aligned_cols=178  Identities=13%  Similarity=0.154  Sum_probs=146.9

Q ss_pred             cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q 019064            5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT   84 (346)
Q Consensus         5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~   84 (346)
                      .-.+.++.+|+....+.+..+++.+..+.+....+ .+++++|++..+.+.+.+.+.....++.++.|+++||+ |||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~   79 (405)
T TIGR00891         2 WYRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLP   79 (405)
T ss_pred             CCCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHH
Confidence            33445667888888888899999988877655555 56778999999999999999999999999999999996 99999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064           85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL  164 (346)
Q Consensus        85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~  164 (346)
                      +.++.++..++.+++.+..                   +.+.+++.+++.|+|.++..+...++..|.+++++      |
T Consensus        80 ~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~  134 (405)
T TIGR00891        80 MVTSIVLFSAGTLACGFAP-------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------R  134 (405)
T ss_pred             HHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------h
Confidence            9999988888877665532                   35678889999999999999999999999998543      5


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhhccc--hhHHHHHHHHHHHHH
Q 019064          165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIG  209 (346)
Q Consensus       165 ~~~f~~~y~~~niG~~i~~~~~~~i~~~~g--~~~~f~i~~~~~~~~  209 (346)
                      ....+++....++|..+++.+.+.+.+..+  |++.|.+.++..++.
T Consensus       135 ~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~  181 (405)
T TIGR00891       135 NKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA  181 (405)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence            777888888899999999998888877665  999998765544443

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.58  E-value=9.6e-14  Score=134.50  Aligned_cols=176  Identities=13%  Similarity=0.048  Sum_probs=143.1

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      ++..|+....+....++.-..-|.....++.+ .+++|++..+.+...+.+.....++.++.|+++||+ |||+.+.++.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~   92 (394)
T PRK10213         15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA   92 (394)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence            34467776666666565555666666666654 457999999999999999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ++..++.++.....                   +.+.+++.+.+.|++.|...+...++..|.+++++      +.....
T Consensus        93 ~~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~  147 (394)
T PRK10213         93 VLLTLSCLLVSFAN-------------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALS  147 (394)
T ss_pred             HHHHHHHHHHHHHC-------------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHH
Confidence            99988877765532                   46788999999999999999999999999997543      567788


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      +.....++|.++++.+++++.+..||++.|.+.+++.++..+.
T Consensus       148 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~  190 (394)
T PRK10213        148 VIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW  190 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence            8888899999999999999999899999998877655544433

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.58  E-value=7.5e-14  Score=136.06  Aligned_cols=175  Identities=13%  Similarity=0.080  Sum_probs=139.8

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+|+..+++.+..+++......+.. ....+++++|++..+.+++.+++.....++.+++|+++||+ |||+++..+.++
T Consensus         5 ~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~   82 (412)
T TIGR02332         5 LFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVL   82 (412)
T ss_pred             ehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHH
Confidence            4566666666666666555554444 44488899999999999999999999999999999999996 999999999999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      +.++.++..++.                   +.+.+++++.+.|++.|+..|....+.+|.++++.      |....+++
T Consensus        83 ~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~  137 (412)
T TIGR02332        83 WGIASTATMFAT-------------------GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALF  137 (412)
T ss_pred             HHHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence            999888776642                   35678889999999999999998889999998422      56777888


Q ss_pred             HHHHHHHHHHHHhhhhhhhh------ccchhHHHHHHHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFI------DQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~------~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      ....++|.++++.+++++.+      ..||++.|.+.++..++..++.
T Consensus       138 ~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~  185 (412)
T TIGR02332       138 MIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT  185 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            88889999999998888753      3699999998776655444433

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.57  E-value=1.4e-13  Score=131.60  Aligned_cols=176  Identities=16%  Similarity=0.105  Sum_probs=142.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      +++..+.+....+...++.....+.++ ++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~   80 (385)
T TIGR00710         3 AKAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF   80 (385)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence            445555666666666666655555554 45678999999999999999999999999999999996 9999999999888


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.+++....                   +.+.+++.+++.+++.+...+...++..|.+++++      |...+++.+
T Consensus        81 ~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~  135 (385)
T TIGR00710        81 ALSSLGLALSN-------------------NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILM  135 (385)
T ss_pred             HHHHHHHHHHc-------------------cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHH
Confidence            88877766542                   35678888999999999999999999999998433      677888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ...++|..+++.+.+++.+..+|+..|.+.++..++..+..+.
T Consensus       136 ~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (385)
T TIGR00710       136 PVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF  178 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999999988899999998877666555554443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.57  E-value=1.9e-13  Score=133.29  Aligned_cols=147  Identities=14%  Similarity=0.098  Sum_probs=121.1

Q ss_pred             cccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc
Q 019064           42 FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG  121 (346)
Q Consensus        42 l~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~  121 (346)
                      +.+++|.+..+++..++.+.....++.+++|+++||+ |||+++..+..+..++.++...+.                  
T Consensus        42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~------------------  102 (413)
T PRK15403         42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFTT------------------  102 (413)
T ss_pred             HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHcC------------------
Confidence            4557899999999999999999999999999999996 999999999998888877666532                  


Q ss_pred             hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHH
Q 019064          122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLI  201 (346)
Q Consensus       122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i  201 (346)
                       +.+.+++++++.|++.+...+...+...|.+++++      +.+.++++....++|..+++.+++++.++.||++.|.+
T Consensus       103 -~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~  175 (413)
T PRK15403        103 -SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAI  175 (413)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence             46778899999999988766666677888888543      45667788888999999999999999888899999998


Q ss_pred             HHHHHHHHHHHHH
Q 019064          202 SSVATLIGLIALA  214 (346)
Q Consensus       202 ~~~~~~~~~~i~~  214 (346)
                      .++..+++.+..+
T Consensus       176 ~~~~~~i~~~~~~  188 (413)
T PRK15403        176 IAVMGLIAFVGLL  188 (413)
T ss_pred             HHHHHHHHHHHHH
Confidence            7776666555433

>PRK10504 putative transporter; Provisional

Probab=99.57  E-value=1.1e-13  Score=136.78  Aligned_cols=179  Identities=10%  Similarity=0.028  Sum_probs=146.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      ..+..|.+.+..++..+.++.+...++.|.+ ++|.+..+.+++.+.+.....++.+++|+++||+ |||++++.+..+.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~   85 (471)
T PRK10504          8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLF   85 (471)
T ss_pred             hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHH
Confidence            3556788888889999999888888887775 6999999999999999989899999999999996 9999999888888


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.++..++.                   +.+.+++++.+.++|.+...+...+...|.++++      ++...++++.
T Consensus        86 ~~~~~~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  140 (471)
T PRK10504         86 TLGSLFCALSG-------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE------QYMAAMTFVT  140 (471)
T ss_pred             HHHHHHHHHhC-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH------HHHHHHHHHH
Confidence            88776655431                   3566788899999999999999999999988732      2567778888


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      ...++|..+++.+.+++.++.||++.|.+......++.+......+
T Consensus       141 ~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~  186 (471)
T PRK10504        141 LPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP  186 (471)
T ss_pred             HHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8899999999999999999999999998877655555554444333

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.56  E-value=2.4e-13  Score=131.24  Aligned_cols=177  Identities=13%  Similarity=-0.018  Sum_probs=144.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      -++.+..+++..+...++.......++.|+.+++|.+..+.+.+.+.+.....++.++.|+++||+ ||||++.++.+++
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~   91 (399)
T PRK05122         13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC   91 (399)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence            356777788888888888877888899999999999999999999999999999999999999996 9999999999988


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.+++.++...+...           ..+...+++.+++.|+|.+...++..+...|.+++++      |.+.++++.
T Consensus        92 ~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~  154 (399)
T PRK05122         92 ALSGLLYLLAGLLAAWP-----------VLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNG  154 (399)
T ss_pred             HHHHHHHHHhhhhhccc-----------hhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhh
Confidence            88766655543211100           1245678889999999999999999999999987544      566777777


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL  207 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~  207 (346)
                      ...++|..+++.+++++.+..||+..+.+..+..+
T Consensus       155 ~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~  189 (399)
T PRK05122        155 IATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL  189 (399)
T ss_pred             hhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence            88889999999999998888999988876655443

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.56  E-value=1.8e-13  Score=132.65  Aligned_cols=175  Identities=16%  Similarity=0.143  Sum_probs=133.7

Q ss_pred             CchHHHHHHHHHHHHHHHHH---HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFI---ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~y---gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +.+..++++...+.+-..++   .+...++. +.+++|.+..+.+...+.+.....++.++.|+++||+ ||||.+.++.
T Consensus         8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~   85 (406)
T PRK15402          8 GRQALLFPLCLVLFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGV   85 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHH
Confidence            35556666665555554443   33344443 4568999999999999999999999999999999996 9999999998


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .+..++.++.....                   +.+.+++.+++.|++.+...+...+...|.++++.      +.+..+
T Consensus        86 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~  140 (406)
T PRK15402         86 AFFILTCLAILLAQ-------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITA  140 (406)
T ss_pred             HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHH
Confidence            88888776655432                   35667888899999998888888888899987543      445566


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +.+....+|..+++.+.+++.++.+|++.|.+.++..+++.+...
T Consensus       141 ~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~  185 (406)
T PRK15402        141 LMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLW  185 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence            666677788899999999998889999999887776665555433

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.55  E-value=2.2e-13  Score=131.37  Aligned_cols=174  Identities=11%  Similarity=0.081  Sum_probs=137.3

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      |++.+|..+.+....++..++.....+.++ ++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.
T Consensus         3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~-~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~   80 (394)
T PRK11652          3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIA-DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGM   80 (394)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHH
Confidence            445677777777777777777665555555 45578999999999999999999999999999999996 9999999998


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .+..++.++.....                   +.+.+++.+++.+++.+...+....+..|.+++++      +....+
T Consensus        81 ~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  135 (394)
T PRK11652         81 SIFILGTLVALFAH-------------------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANS  135 (394)
T ss_pred             HHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHH
Confidence            88888877655431                   35678888999999988877777778888776432      456666


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL  210 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~  210 (346)
                      ++..+..+|..+++.+.+++.+..||+..|.+.++..++..
T Consensus       136 ~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~  176 (394)
T PRK11652        136 LLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVT  176 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH
Confidence            77778888999999999999888899999988766554433

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.54  E-value=2.6e-13  Score=135.41  Aligned_cols=177  Identities=12%  Similarity=0.008  Sum_probs=144.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      .|.....+++..++..+..-.+...++.. .+++|.+..+.+++.+.|......+.+++|+++||+ |||+++.++..+.
T Consensus         4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~   81 (495)
T PRK14995          4 QWLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF   81 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence            35566777777777777776666666654 568999999999999999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.++...+.                   +.+.+++++.+.|+|.++..+.....+.+.+.++  +   +|...++++.
T Consensus        82 ~~~~~~~~~a~-------------------~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~--~---~r~~~~g~~~  137 (495)
T PRK14995         82 GLASLAAAFSP-------------------TASWLIATRALLAIGAAMIVPATLAGIRATFTEE--K---QRNMALGVWA  137 (495)
T ss_pred             HHHHHHHHHcC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH--H---HHHHHHHHHH
Confidence            99988777542                   4678899999999999999888888787877532  1   2678889999


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ...++|..+|+.+++++.++.||++.|.+...+.++.+++...
T Consensus       138 ~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~  180 (495)
T PRK14995        138 AVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTAR  180 (495)
T ss_pred             HHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999876655555444333

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.53  E-value=4.8e-13  Score=129.41  Aligned_cols=177  Identities=16%  Similarity=0.137  Sum_probs=142.2

Q ss_pred             ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064            8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV   87 (346)
Q Consensus         8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~   87 (346)
                      ++.+.+|..........+++.+..+.....++ .+.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~   85 (406)
T PRK11551          8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIV   85 (406)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHH
Confidence            33345566667777777788777766655555 45567999999999999999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      +.++..++.+++.+..                   +.+.+++.+.+.+++.+...+...++..|.+++++      |.+.
T Consensus        86 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~  140 (406)
T PRK11551         86 SVALFGLFSLATAQAW-------------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTA  140 (406)
T ss_pred             HHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence            9888877766555431                   35677888999999999999999999999997433      6778


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          168 FNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       168 f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      +++++...++|..+++.+...+.+..+|+..|.+.+++.++..+
T Consensus       141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (406)
T PRK11551        141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP  184 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH
Confidence            88888899999999999888888888999999887665544443

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.53  E-value=2.6e-13  Score=133.08  Aligned_cols=166  Identities=11%  Similarity=0.071  Sum_probs=132.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+..++..++..+..+.....++.+. +++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~  102 (434)
T PRK11663         25 LITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN  102 (434)
T ss_pred             HHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence            33444445555444445555555555 46999999999999999999999999999999996 99999999999988887


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +++..+.                   +.+.+++.+++.+++.|...+...++..|++++++      |+..+++++...+
T Consensus       103 ~~~~~~~-------------------~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~  157 (434)
T PRK11663        103 ILFGFSS-------------------SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHN  157 (434)
T ss_pred             HHHHHHh-------------------HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence            7666542                   45667777888899999888999999999998432      6778888888999


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIG  209 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~  209 (346)
                      +|+.+++.+.+++.+.+||++.|.+.++..++.
T Consensus       158 ~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~  190 (434)
T PRK11663        158 VGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV  190 (434)
T ss_pred             HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence            999999999999998899999998877654433

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.52  E-value=4.5e-13  Score=130.44  Aligned_cols=168  Identities=10%  Similarity=0.099  Sum_probs=139.0

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      +.+++......+..+.+.+.++.. ..+..++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~   91 (426)
T PRK12307         14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV   91 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence            445666666667777777777655 4444567788999999999999999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++.++..++.                   +.+.+++++++.|+|.|+..+...++..|.++++.      |....++
T Consensus        92 ~~~~~~~~~~~~~-------------------~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~  146 (426)
T PRK12307         92 AYSVGTGLSGLAS-------------------GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAF  146 (426)
T ss_pred             HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhH
Confidence            9999887766542                   46778899999999999999999999999998543      5667777


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVA  205 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~  205 (346)
                      +..+.++|.++++.+.+++.+..||++.|.+.++.
T Consensus       147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~  181 (426)
T PRK12307        147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP  181 (426)
T ss_pred             HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence            88889999999998888888889999999875543

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.50  E-value=9.5e-13  Score=125.14  Aligned_cols=164  Identities=10%  Similarity=0.033  Sum_probs=126.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      ..+..+...++....++...+.++.|+++++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~   80 (366)
T TIGR00886         2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP   80 (366)
T ss_pred             chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence            345566666666777777777777789999999999999999999999999999999999996 9999999999999998


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      .+++....                  .+.+.+++++++.+++.+.. +...++.+|.+++++      |....+++....
T Consensus        81 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~~  135 (366)
T TIGR00886        81 CLWAGLAV------------------QSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGWG  135 (366)
T ss_pred             HHHHHHHh------------------hhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHHh
Confidence            87766542                  03567778888999986544 556788999987543      566677777677


Q ss_pred             HHHHHHHHhhhhhhhh----------ccchhHHH-HHHHHH
Q 019064          176 TLAAMIGVTAIVYVFI----------DQGWWLGF-LISSVA  205 (346)
Q Consensus       176 niG~~i~~~~~~~i~~----------~~g~~~~f-~i~~~~  205 (346)
                      ++|..+++.+.+.+..          +.+|++.| .+.++.
T Consensus       136 ~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~  176 (366)
T TIGR00886       136 NMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGI  176 (366)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHH
Confidence            7887777776655543          34899998 443433

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.50  E-value=8.4e-13  Score=127.16  Aligned_cols=174  Identities=13%  Similarity=0.093  Sum_probs=141.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ++.++.+....++-..+.+.....++. +.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++..+..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~   79 (382)
T PRK10091          2 KKVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCV   79 (382)
T ss_pred             cchHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHH
Confidence            456777777888877777777666654 5568999999999999999999999999999999996 99999999999999


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.++...+.                   +.+.+++.+++.|++.|...+...++..|.+++++      +.+.++.+..
T Consensus        80 ~~~~l~~~~~-------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  134 (382)
T PRK10091         80 IGNAMFTLSS-------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVS  134 (382)
T ss_pred             HHHHHHHHhC-------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHH
Confidence            8887766542                   46778889999999999888888888888876432      4556667777


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++|..+++.+++++.+..||++.|.+.++..++..+...
T Consensus       135 ~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~  175 (382)
T PRK10091        135 GMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIY  175 (382)
T ss_pred             HHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHH
Confidence            88899999999989998889999999988776555544333

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.50  E-value=9.8e-13  Score=126.44  Aligned_cols=150  Identities=12%  Similarity=0.047  Sum_probs=114.3

Q ss_pred             HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK  115 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~  115 (346)
                      ......+.+++|++..+.+.+.+.+.....++.++.|+++||+ |||+++.........+.. ....+            
T Consensus        11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~~------------   76 (368)
T TIGR00903        11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLDP------------   76 (368)
T ss_pred             HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHHh------------
Confidence            4444566678999999999999999999999999999999996 999876655444444322 12211            


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064          116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~  195 (346)
                            .+...+++++++.|+|.+.. .+..+..+|.+++++      |.+..+....+.++|.++++.+++++.++.||
T Consensus        77 ------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gW  143 (368)
T TIGR00903        77 ------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAGLKIYTAGGL  143 (368)
T ss_pred             ------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccch
Confidence                  14678999999999999864 444455688887432      67888888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHH
Q 019064          196 WLGFLISSVATLIGLIA  212 (346)
Q Consensus       196 ~~~f~i~~~~~~~~~~i  212 (346)
                      |..|.+.+++.++..++
T Consensus       144 r~~f~~~~~l~~~~~~~  160 (368)
T TIGR00903       144 QLLIIPIAAVAAAGIIL  160 (368)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99998866654444443

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.50  E-value=1.8e-12  Score=126.92  Aligned_cols=169  Identities=15%  Similarity=0.168  Sum_probs=118.8

Q ss_pred             HHHHHHHHHHHHhHHHHHHHcccccC---CchhHHHHHHHHHHHHHH---HHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           22 VLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFFGSTF---LLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        22 ~~~~~e~~a~ygv~~~l~~yl~~~lg---~s~~~a~~~~~~~~~~~~---~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      +..++|.+.+.. ...+..++.++++   .+..+.+.+...+.....   ++.+++|+++||+ ||||++.++.+++.++
T Consensus        29 ~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~  106 (432)
T PRK10406         29 SGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG  106 (432)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence            345666666654 4555667777774   455544444444444433   7888999999996 9999999999999998


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      .++..++   |+...        ........+++.+++.|+|.|+..+...++++|.+++++      |+...+..+...
T Consensus       107 ~~~~~~~---~~~~~--------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~  169 (432)
T PRK10406        107 SLVIACL---PGYET--------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTL  169 (432)
T ss_pred             HHHHhhc---CCchh--------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHH
Confidence            8776654   32110        001134568889999999999999999999999998654      456677777778


Q ss_pred             HHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHHH
Q 019064          176 TLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLIG  209 (346)
Q Consensus       176 niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~~  209 (346)
                      +.|.+++..+...+.        ..+|||..|.+.++..++.
T Consensus       170 ~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~  211 (432)
T PRK10406        170 IGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA  211 (432)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence            888887776554443        2579999999876655443

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.49  E-value=8e-13  Score=131.30  Aligned_cols=170  Identities=14%  Similarity=0.197  Sum_probs=139.6

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      +.+|+....+.+..++..+.+..+.. +..++.+++|++..+++.+.+.+.....++.+++|+++||+ |||+++.++.+
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~   93 (496)
T PRK03893         16 RAQWKAFSAAWLGYLLDGFDFVLITL-VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV   93 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence            44567777777777777777765544 44567788999999999999999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++.+++.+..                   +.+.+++.+.+.|++.++..+...++..|.+++++      +...++.
T Consensus        94 ~~~~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~  148 (496)
T PRK03893         94 LFSVGTLACGFAP-------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGF  148 (496)
T ss_pred             HHHHHHHHHHHHh-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence            9888887776542                   46678888999999999999999999999998432      5667777


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL  207 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~  207 (346)
                      ++...++|..+++.+.+++.++.||++.|.+.++..+
T Consensus       149 ~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~  185 (496)
T PRK03893        149 LISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII  185 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence            8888999999999999999899999999987544333

>TIGR00895 2A0115 benzoate transport

Probab=99.49  E-value=7.2e-13  Score=126.63  Aligned_cols=173  Identities=17%  Similarity=0.136  Sum_probs=137.0

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+|+.....+...++..+.++... ....++.+++|.+..+++.+.+.+.....++.++.|+++||+ |||+++.++.++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~   91 (398)
T TIGR00895        14 YQWRAIILSFLIMLMDGYDLAAMG-FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILL   91 (398)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH-hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHH
Confidence            345555555566666666555443 444566678999999999999999999999999999999996 999999999888


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++.+++....                   +.+.+++.+++.+++.+...+...++.+|.++++.      |+..++++
T Consensus        92 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~  146 (398)
T TIGR00895        92 FSVFTLLCALAT-------------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLM  146 (398)
T ss_pred             HHHHHHHHHHcc-------------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhH
Confidence            888776655431                   35667888999999999999999999999997432      67788888


Q ss_pred             HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      ....++|..+++.+.+++.+..||+..|.+.++..++..+
T Consensus       147 ~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~  186 (398)
T TIGR00895       147 FCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL  186 (398)
T ss_pred             hhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence            8899999999999999999889999999887544443333

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.49  E-value=5.8e-13  Score=131.62  Aligned_cols=172  Identities=8%  Similarity=0.077  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      ....+++..+...+....+...+ .++.+++|.+..+.+++.+.+.....++.+++|+++||+ |||+++.++.++..++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~   80 (485)
T TIGR00711         3 LTIVLMLGTFMAVLDSTIVNVAI-PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG   80 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence            34455556666666655444444 456678999999999999999999999999999999996 9999999999999988


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      .++...+.                   +...+++++++.|+|.+...+...+++.|.+++++      |...+++++...
T Consensus        81 ~~~~~~~~-------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~  135 (485)
T TIGR00711        81 SLLCGVAP-------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTV  135 (485)
T ss_pred             HHHHhCcC-------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHH
Confidence            77765432                   46678899999999999999999999999998432      677888888899


Q ss_pred             HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ++|..+++.+++++.+++||++.|.+.+...++..++..
T Consensus       136 ~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~  174 (485)
T TIGR00711       136 LVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAF  174 (485)
T ss_pred             HHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHH
Confidence            999999999999999999999999887665554444333

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK10133 L-fucose transporter; Provisional

Probab=99.48  E-value=4.2e-12  Score=124.84  Aligned_cols=156  Identities=15%  Similarity=0.052  Sum_probs=117.2

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +++....+..+.+.-+..-+........++ .+++.+|.+..+++...+.+.....++.++.|.++||+ |||+++.++.
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~   98 (438)
T PRK10133         21 SRSYIIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGL   98 (438)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence            344455556666666666666655555555 45889999999999999999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .++.+|.+++.....                ..+...+++++++.|+|.|...+...++++|..+++.      +....+
T Consensus        99 ~~~~~~~~l~~~~~~----------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s  156 (438)
T PRK10133         99 FLYALGAALFWPAAE----------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLN  156 (438)
T ss_pred             HHHHHHHHHHHHHHh----------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHH
Confidence            999999877643221                1246788999999999999999999999998644322      222344


Q ss_pred             HHHHHHHHHHHHHHhhhhhh
Q 019064          170 FYLFATTLAAMIGVTAIVYV  189 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i  189 (346)
                      .+.....+|..+++.+++.+
T Consensus       157 ~~~~~~~~G~~~g~~~g~~l  176 (438)
T PRK10133        157 LAQTFNSFGAIIAVVFGQSL  176 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            55556667777777665543

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.48  E-value=1.9e-12  Score=121.13  Aligned_cols=169  Identities=20%  Similarity=0.200  Sum_probs=144.4

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV   97 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~   97 (346)
                      +.+....+++.++++.....++.|.+ ++|.+..+.+.+.........++.++.|+++||+ |||+++.++..+..++.+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~   79 (352)
T cd06174           2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL   79 (352)
T ss_pred             HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence            34566778888888888888888775 5799999999999999999999999999999996 999999999999999887


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++.+..                   +.+.+++++.+.+++.+...+...++..|.+++++      |...+++.+...++
T Consensus        80 ~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  134 (352)
T cd06174          80 LLAFAS-------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL  134 (352)
T ss_pred             HHHHhc-------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence            766541                   46778889999999999999999999999998644      67888888999999


Q ss_pred             HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      |..+++.+.+.+.+..+|+..|.+.++..+++.++.
T Consensus       135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (352)
T cd06174         135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL  170 (352)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998899999988777665554443

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00897 2A0118 polyol permease family

Probab=99.48  E-value=3.1e-12  Score=124.06  Aligned_cols=172  Identities=8%  Similarity=0.009  Sum_probs=135.8

Q ss_pred             cccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHH
Q 019064            7 GIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL   86 (346)
Q Consensus         7 ~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~   86 (346)
                      +..|.|-||.+....+..++-.++.+.....++.|+ +++|.+..+++.+.+.+.....++.++.|+++||+ ||||++.
T Consensus         5 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~   82 (402)
T TIGR00897         5 NLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMM   82 (402)
T ss_pred             cHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHH
Confidence            345678889999999999999999887778888888 46899999999999999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      .+..+..++.+++.+.+. .              ..+.+.+++.+.+.|+|.+...+...+...|.+++++      +.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~-~--------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~  141 (402)
T TIGR00897        83 IGLLLWCVGHAAFIVFGL-G--------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSS  141 (402)
T ss_pred             HHHHHHHHHHHHHHHHhc-c--------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHH
Confidence            999998888665433221 0              1135566777888899888777777777888877432      577


Q ss_pred             HHHHHHHHHHHHH-HHHHhhhhhhhhccchhHHHHH
Q 019064          167 YFNFYLFATTLAA-MIGVTAIVYVFIDQGWWLGFLI  201 (346)
Q Consensus       167 ~f~~~y~~~niG~-~i~~~~~~~i~~~~g~~~~f~i  201 (346)
                      ..+++..+.++|. .+++.+.+++.+..||+..+..
T Consensus       142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~  177 (402)
T TIGR00897       142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWS  177 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence            7788888888886 5788888888888886544443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.47  E-value=6.8e-13  Score=135.98  Aligned_cols=199  Identities=13%  Similarity=0.152  Sum_probs=152.0

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +...+|.+.+.+....+....+.+.......-+.++++++..+.+.+.+.+.+...++.++.|+++||+ ||+|.+.+++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~  105 (633)
T TIGR00805        27 LFSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGC  105 (633)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecH
Confidence            344566665556556666667778888888888899999999999999999999999999999999995 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCC----------------CCCCCCCC------------CCCCCch----hHHHHHHHHHHHHHh
Q 019064           90 TLEVLSLVMLTIQAYSKS----------------LHPPDCGK------------SSCLKGA----IAAYFYGSLYLYSLG  137 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~----------------~~~~~~~~------------~~~~~~~----~~~~~~~~l~l~~iG  137 (346)
                      +++.+|.+++++..++..                ..+..|..            ..|.+..    ....+++++++.|+|
T Consensus       106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG  185 (633)
T TIGR00805       106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG  185 (633)
T ss_pred             HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence            999999998877532110                01112311            0232211    356778999999999


Q ss_pred             ccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc----------------------ch
Q 019064          138 CGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ----------------------GW  195 (346)
Q Consensus       138 ~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~----------------------g~  195 (346)
                      .+...+...+++.|.+++++      +...+++++.+..+|.++|+.+++++.+.+                      +|
T Consensus       186 ~~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaW  259 (633)
T TIGR00805       186 ATPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAW  259 (633)
T ss_pred             CCcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHH
Confidence            99999999999999998654      577888899999999999999988876532                      28


Q ss_pred             hHHHHHHHHHHHHHHHHHHh
Q 019064          196 WLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       196 ~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+|.+.+++.++..+.++.
T Consensus       260 wl~Fli~g~l~~l~~v~l~~  279 (633)
T TIGR00805       260 WIGFLICGGVALLTSIPFFF  279 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            88998877766555444433

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK11043 putative transporter; Provisional

Probab=99.47  E-value=2.3e-12  Score=124.57  Aligned_cols=170  Identities=18%  Similarity=0.221  Sum_probs=131.5

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHH--cccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           19 FVFVLSALENMGFIANGISMVLY--FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        19 ~i~~~~~~e~~a~ygv~~~l~~y--l~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      +++...+.-..++.+....+|.+  +.+++|.+..+++.+.+.+.....++.++.|+++||+ |||+++..+..+..++.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~   85 (401)
T PRK11043          7 FLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGS   85 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHH
Confidence            34444444555555555555544  6678999999999999999999999999999999996 99999999988888877


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      ++.....                   +.+.+++++++.|+|.+...+...++..|.++++.      +.+.++......+
T Consensus        86 ~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  140 (401)
T PRK11043         86 LGMLWVE-------------------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVA  140 (401)
T ss_pred             HHHHHhc-------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHH
Confidence            6655432                   35677888889999988887878888899887542      3555666666788


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +|..+++.+++++.+.+||+..|.+.++..++..+..+
T Consensus       141 ~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~  178 (401)
T PRK11043        141 LSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTL  178 (401)
T ss_pred             HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999989999999887766655544433

>PRK03699 putative transporter; Provisional

Probab=99.47  E-value=4.2e-12  Score=122.78  Aligned_cols=175  Identities=14%  Similarity=0.144  Sum_probs=137.9

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      ..++|..+......++.....+.....++. +.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~   80 (394)
T PRK03699          3 SNRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA   80 (394)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence            456677887777777777777666666665 5568999999999999999999999999999999996 99999999988


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++.+++.+..                   +.+.+++.+.+.+++.|...+...+.+.|.+++++      |....+.
T Consensus        81 ~~~i~~~l~~~~~-------------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~  135 (394)
T PRK03699         81 LMILAVAGLMFSH-------------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLF  135 (394)
T ss_pred             HHHHHHHHHHHcc-------------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHH
Confidence            8888877666531                   45678888999999999999999999999997543      4555556


Q ss_pred             HHHHHHHHHHHHHhhhhhhh-hccchhHHHHHHHHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVF-IDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~-~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      .+...++|+.+++.+.+++. +..||++.|.+.++..++..++
T Consensus       136 ~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~  178 (394)
T PRK03699        136 TDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL  178 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence            66677888888888877764 4579999998877655544443

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.47  E-value=2.5e-12  Score=122.53  Aligned_cols=170  Identities=14%  Similarity=0.069  Sum_probs=126.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH-HHHHHHHHHHH
Q 019064           21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF-GTLEVLSLVML   99 (346)
Q Consensus        21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~-~~l~~~G~~ll   99 (346)
                      ++..++-.+++....+.++.|+.+++|.+..+.+.+.+.+.....+..++.|.++||+ ||||.+++. ..+..++.++.
T Consensus         3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~   81 (375)
T TIGR00899         3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF   81 (375)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence            4557778888888889999999999999999999999999999999999999999996 998876554 44444454444


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA  179 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~  179 (346)
                      ..+.                   +.+.+++...+.+.+.+...|...++..|..++++    +.+..+.++.....++|.
T Consensus        82 ~~~~-------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~  138 (375)
T TIGR00899        82 AWNR-------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG----REAVMFSSVMRAQISLAW  138 (375)
T ss_pred             Hhcc-------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc----hhhHHHHHHHHHHHhHHH
Confidence            3321                   34556666667777777777777777777665332    112223566677789999


Q ss_pred             HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .+++.+++++.+..||++.|.+.++..++..++.+
T Consensus       139 ~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~  173 (375)
T TIGR00899       139 VIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVW  173 (375)
T ss_pred             HHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            99999999998889999999988776655554443

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.46  E-value=9e-13  Score=125.18  Aligned_cols=152  Identities=15%  Similarity=0.151  Sum_probs=128.9

Q ss_pred             HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064           37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS  116 (346)
Q Consensus        37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~  116 (346)
                      ....++.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++..++.++.             
T Consensus        15 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~-------------   80 (399)
T TIGR00893        15 FAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG-------------   80 (399)
T ss_pred             HhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc-------------
Confidence            334457788999999999999999999999999999999996 999999999998888877766542             


Q ss_pred             CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchh
Q 019064          117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW  196 (346)
Q Consensus       117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~  196 (346)
                            +.+.+++++++.|+|.+...+...++..|.+++++      |.+.++++....++|.++++.+.+++.++.+|+
T Consensus        81 ------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~  148 (399)
T TIGR00893        81 ------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ  148 (399)
T ss_pred             ------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence                  46778899999999999999999999999998432      678888889999999999999999988889999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 019064          197 LGFLISSVATLIGLIALA  214 (346)
Q Consensus       197 ~~f~i~~~~~~~~~~i~~  214 (346)
                      +.|.+.++..++..++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~  166 (399)
T TIGR00893       149 WAFIIEGVLGIIWGVLWL  166 (399)
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999887766555544433

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.46  E-value=2e-12  Score=122.51  Aligned_cols=150  Identities=17%  Similarity=0.135  Sum_probs=122.7

Q ss_pred             HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK  115 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~  115 (346)
                      ..+.+++.+++|++..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++.++..++.            
T Consensus        23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~------------   89 (377)
T TIGR00890        23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIAD------------   89 (377)
T ss_pred             hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHH------------
Confidence            4566788889999999999999999999999999999999996 999999999999999887766543            


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064          116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~  195 (346)
                             +.+.+++++.+.|+|.+...+...+...+.++++       |+...+++....++|.++++.+.+.+.+..||
T Consensus        90 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  155 (377)
T TIGR00890        90 -------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDK-------RGLASGIIIGGYGLGSFILSPLITSVINLEGV  155 (377)
T ss_pred             -------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcc-------cHHHHHHHHHhcchhHhHHHHHHHHHHhcccH
Confidence                   4677888888999999988888878777777632       46677788888889988776666667677899


Q ss_pred             hHHHHHHHHHHHHHHHH
Q 019064          196 WLGFLISSVATLIGLIA  212 (346)
Q Consensus       196 ~~~f~i~~~~~~~~~~i  212 (346)
                      ++.|.+.++..++..+.
T Consensus       156 ~~~f~~~~~~~~~~~~~  172 (377)
T TIGR00890       156 PAAFIYMGIIFLLVIVL  172 (377)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999877766554443

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.46  E-value=2e-12  Score=123.69  Aligned_cols=153  Identities=13%  Similarity=0.156  Sum_probs=127.2

Q ss_pred             hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064           34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC  113 (346)
Q Consensus        34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~  113 (346)
                      ..+.++.+.+ ++|.+..+++.+.+.+.....++.+++|+++||+ |||+++.++.++..++..++....          
T Consensus        10 ~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~----------   77 (377)
T PRK11102         10 YLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ----------   77 (377)
T ss_pred             HhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence            3455666654 6899999999999999999999999999999996 999999999999888877766542          


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019064          114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ  193 (346)
Q Consensus       114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~  193 (346)
                               +.+.+++.+++.+++.+...+...++..|.+++++      |.+.+++.+...++|..+++.+.+++.+..
T Consensus        78 ---------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~  142 (377)
T PRK11102         78 ---------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLVWF  142 (377)
T ss_pred             ---------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence                     35667788889999999999999999999987543      677888888899999999999999998889


Q ss_pred             chhHHHHHHHHHHHHHHHHH
Q 019064          194 GWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       194 g~~~~f~i~~~~~~~~~~i~  213 (346)
                      +|++.|.+.++..++..+..
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~  162 (377)
T PRK11102        143 SWHAIFWVLALAAILAAALV  162 (377)
T ss_pred             ChHHHHHHHHHHHHHHHHHH
Confidence            99999988776655554433

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.46  E-value=2.3e-12  Score=124.78  Aligned_cols=161  Identities=12%  Similarity=0.126  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064           23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ  102 (346)
Q Consensus        23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~  102 (346)
                      +.+.-|-.++.+...++ .+.+++|+|..+.+++.+.+.....++.++.|+++||+ |||+++..+..+..+|.++..++
T Consensus        17 ~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a   94 (393)
T PRK09705         17 IGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY   94 (393)
T ss_pred             HHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC
Confidence            33334444455555555 56678999999999999999999999999999999996 99999999999999998887765


Q ss_pred             hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHH
Q 019064          103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIG  182 (346)
Q Consensus       103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~  182 (346)
                      .                   +.+.+++++++.|+|.+...++......|.++++       |....+.+..+.+.|..++
T Consensus        95 ~-------------------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~g~~~g  148 (393)
T PRK09705         95 P-------------------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQR-------TPLVMGLWSAALMGGGGLG  148 (393)
T ss_pred             c-------------------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcccc-------chhHHHHHHHHHHHHHHHH
Confidence            2                   3566788999999999999999999988888632       4667777777888999999


Q ss_pred             Hhhhhhhhhcc-chhHHHHHHHHHHHHHHH
Q 019064          183 VTAIVYVFIDQ-GWWLGFLISSVATLIGLI  211 (346)
Q Consensus       183 ~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~  211 (346)
                      +.+++++.++. +|+..+.+.++..++.++
T Consensus       149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~  178 (393)
T PRK09705        149 AAITPWLVQHSETWYQTLAWWALPAVVALF  178 (393)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            99999888775 899887665444443333

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.46  E-value=3.9e-12  Score=122.79  Aligned_cols=171  Identities=16%  Similarity=0.041  Sum_probs=134.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHH-----HHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGA-----SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a-----~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      |....+++..++..+++......++.|++ ++|.+..++     +.+.+.+.....++.++.|+++||+ |||+++..+.
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~   91 (408)
T PRK09874         14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA   91 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence            44667778888889998888888888886 488876543     6677788888899999999999996 9999999998


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ++..++.+++....                   +.+.+++.+.+.+++.+ ..+...+...|++++++      +....+
T Consensus        92 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~  145 (408)
T PRK09874         92 LGMGIVMVLMGLAQ-------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWALG  145 (408)
T ss_pred             HHHHHHHHHHHHHh-------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHHH
Confidence            88888776655432                   45677888888888754 45777778888886432      566777


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      .+....++|.++++.+.+++.+..+|+..|.+.++..++..+..
T Consensus       146 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (408)
T PRK09874        146 TLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVT  189 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence            77888899999999999999888999999988877665555443

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.45  E-value=6.2e-12  Score=121.24  Aligned_cols=166  Identities=13%  Similarity=0.165  Sum_probs=129.9

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q 019064           20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML   99 (346)
Q Consensus        20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll   99 (346)
                      ..+..+..-.++......++. +.+++|.+..+.+...+.+.....++.++.|+++||+ |||+.+.++.++..++..++
T Consensus         8 ~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~   85 (392)
T PRK10473          8 SFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLC   85 (392)
T ss_pred             HHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHH
Confidence            344444445555444444554 4567999999999999999989999999999999996 99999999998888887766


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA  179 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~  179 (346)
                      ....                   +.+.+++++.+.+++.+...+...++..|.+++++      |.+.+++.+...++|.
T Consensus        86 ~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~~  140 (392)
T PRK10473         86 SLAE-------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCIIP  140 (392)
T ss_pred             HHhC-------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHH
Confidence            5432                   34567778889999999888888999999987433      6777888888889999


Q ss_pred             HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      .+++.+.+++.+..||+..|.+.++..++..++
T Consensus       141 ~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~  173 (392)
T PRK10473        141 VLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL  173 (392)
T ss_pred             HHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH
Confidence            999999888888889999998877655544443

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.44  E-value=7e-12  Score=119.72  Aligned_cols=182  Identities=16%  Similarity=0.083  Sum_probs=157.7

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      ++..|..++.+-+..|+-..+=+.+...++ -+.+++|.+..+++..++.|.....++.|+-..+.||+ .||+.++..+
T Consensus         8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp-~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l   85 (394)
T COG2814           8 RKPMWLALLALALAAFAIGTTEFVPVGLLP-PIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLL   85 (394)
T ss_pred             cccchHHHHHHHHHHHHHHhHHHHHHhchH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHH
Confidence            455677777777778877777766666665 45568999999999999999999999999999999995 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .+..+|.++..++.                   +++.+.+++++.++..|.+.+...+..+|..|+++      +.+...
T Consensus        86 ~lFi~~n~l~alAp-------------------~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aia  140 (394)
T COG2814          86 ALFIVSNLLSALAP-------------------SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALA  140 (394)
T ss_pred             HHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHH
Confidence            99999999888763                   57899999999999999999999999999999765      677888


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      ..+.+..++..+|..++.++.+.+|||..|.+.+++.+++++..+...|
T Consensus       141 iv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP  189 (394)
T COG2814         141 LVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP  189 (394)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8888899999999999999999999999999888877777777776666

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.43  E-value=9.2e-12  Score=121.42  Aligned_cols=173  Identities=15%  Similarity=0.105  Sum_probs=131.8

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+.+...-+...+.+ ++...+...+++++|++..+++.+.+.+.....++.++.|++.||+ |||+++.++.++..+|.
T Consensus         5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~   82 (410)
T TIGR00885         5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA   82 (410)
T ss_pred             HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence            444555555555555 5555666677889999999999999999999999999999999996 99999999999999998


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      .++..++.                ..+.+.+++++++.|+|.|...+...++..+..++++      +.+..+......+
T Consensus        83 ~l~~~~~~----------------~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  140 (410)
T TIGR00885        83 FLFWPAAE----------------IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNP  140 (410)
T ss_pred             HHHHHHHh----------------hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHH
Confidence            77654431                1246788899999999999999999999988876443      3444666667788


Q ss_pred             HHHHHHHhhhhhhhh--------------------------ccchhHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFI--------------------------DQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       177 iG~~i~~~~~~~i~~--------------------------~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      +|..+++.+.+.+..                          ..+|+..|.+.++..++..+++
T Consensus       141 lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~  203 (410)
T TIGR00885       141 FGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI  203 (410)
T ss_pred             HHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888887776532                          2469999987766554444333

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.43  E-value=5.8e-12  Score=121.22  Aligned_cols=155  Identities=9%  Similarity=0.080  Sum_probs=131.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .|..+.++...++..+++..+...++.|++ ++|.+..+++.+.+.+.....+++++.|+++||+ |||+++..+.++..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~   82 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA   82 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence            467889999999999999888889998887 5799999999999999999999999999999996 99999999999988


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++..+...+.                   +.+.+++++++.|++.+...+...+...|..++++      |++.++++..
T Consensus        83 ~~~~~~~~~~-------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  137 (381)
T PRK03633         83 AGCAGLGLMV-------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYMM  137 (381)
T ss_pred             HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence            8877666532                   46778889999999999988887777777766432      5778888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccch
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~  195 (346)
                      ..++|..+++.+.+++.+...+
T Consensus       138 ~~~~g~~~g~~~~~~l~~~~~~  159 (381)
T PRK03633        138 VYYLGTVLGQLLVSKVSTELMS  159 (381)
T ss_pred             HHHHHHHHHHHHHhcccccccc
Confidence            9999999999999988765433

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.43  E-value=1.3e-11  Score=119.50  Aligned_cols=184  Identities=15%  Similarity=0.121  Sum_probs=125.7

Q ss_pred             cccccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchh
Q 019064            5 VAGIKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFA   83 (346)
Q Consensus         5 ~~~~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~   83 (346)
                      ++..+-+.-.+..+..++..++.+++...+.+.++.|+++++|.+..+.+.+.+.... ...+.++++|+ +||+ ||||
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~   82 (393)
T PRK15011          5 PAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRK   82 (393)
T ss_pred             cccccchhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchh
Confidence            3333333345677788888999999999999999999999999999999998776544 55556666677 9996 9988


Q ss_pred             HHH-HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHH-HHHHHHHHhccccccchhhhccCCCCCCChhhh
Q 019064           84 TCL-VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFY-GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGA  161 (346)
Q Consensus        84 ~i~-~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~  161 (346)
                      .++ .+.++..++..++.++.                   +.+.++ +++.+.+++ +...|...++..|..++++   |
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~  139 (393)
T PRK15011         83 SLIVFCCLLGVLACTLFAWNR-------------------NYFVLLFVGVFLSSFG-STANPQMFALAREHADKTG---R  139 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-------------------HHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhcc---c
Confidence            755 44444445554444331                   233333 334444443 3556677777777655332   1


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          162 KALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       162 ~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                       ....+.++.....++|.++++.+++++.++.||+..|.+.++..++..+..+
T Consensus       140 -~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~  191 (393)
T PRK15011        140 -EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVW  191 (393)
T ss_pred             -hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence             1223345677789999999999999999889999999888766555544433

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.42  E-value=1.4e-12  Score=123.64  Aligned_cols=151  Identities=11%  Similarity=0.049  Sum_probs=125.2

Q ss_pred             HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064           37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS  116 (346)
Q Consensus        37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~  116 (346)
                      ....++.+++|++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.+++....             
T Consensus        16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~-------------   81 (379)
T TIGR00881        16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFST-------------   81 (379)
T ss_pred             hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhh-------------
Confidence            344577788999999999999999999999999999999996 999999999999988887776542             


Q ss_pred             CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH-hhhhhhhhccch
Q 019064          117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV-TAIVYVFIDQGW  195 (346)
Q Consensus       117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~-~~~~~i~~~~g~  195 (346)
                            +.+.+++.+++.+++.+...+...++..|.+++++      |...+++.....++|..+++ .+...+.+..+|
T Consensus        82 ------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  149 (379)
T TIGR00881        82 ------SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSW  149 (379)
T ss_pred             ------hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCc
Confidence                  45778889999999999999999999999998543      56677777888899999998 566677777899


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 019064          196 WLGFLISSVATLIGLIAL  213 (346)
Q Consensus       196 ~~~f~i~~~~~~~~~~i~  213 (346)
                      +..|.+.+++.++..++.
T Consensus       150 ~~~~~~~~~~~~~~~~~~  167 (379)
T TIGR00881       150 HWVFIVPGIIAIIVSLIC  167 (379)
T ss_pred             hhHHHHHHHHHHHHHHHH
Confidence            999988776655444433

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.42  E-value=1.1e-11  Score=120.21  Aligned_cols=166  Identities=9%  Similarity=0.039  Sum_probs=130.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |..+.++...++..++...+...++.. ..++|.+..+.+++.+.+.....++.+++|+++||+ ||||+++++..+..+
T Consensus         3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~   80 (393)
T PRK11195          3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL   80 (393)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence            345667777788777665555555544 568899999999999999999999999999999996 999999999999888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++....                   +   .++.+.+.|++.++..|...+++.|.+++++      +.+..++....
T Consensus        81 ~~~~~~~~~-------------------~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~  132 (393)
T PRK11195         81 GCLLMLFGI-------------------H---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS  132 (393)
T ss_pred             HHHHHHHHH-------------------H---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence            766654321                   1   1566788999999999999999999998533      67888888888


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      .++|.++|+.+++++.+. .|+..+.+.+.+.+++.+
T Consensus       133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~  168 (393)
T PRK11195        133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLAAL  168 (393)
T ss_pred             HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            899999999999998874 477777766555444433

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.41  E-value=5.3e-12  Score=122.90  Aligned_cols=176  Identities=16%  Similarity=0.142  Sum_probs=132.5

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      ...++...++..++.......++.+. ++++.+..+++.+.+.+.....++.++.|+++||+ |||+.+.++..+..++.
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~   96 (417)
T PRK10489         19 FRAVFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGF   96 (417)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHH
Confidence            33444456666666655555566555 45778999999999999999999999999999996 99999998888877776


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +++.+....+              ..+.+.+++.+++.+++.+...++..+...|.+++++      +.+..+..+...+
T Consensus        97 ~~~~~~~~~~--------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  156 (417)
T PRK10489         97 IGLALNAFLP--------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTVR  156 (417)
T ss_pred             HHHHHHHHcC--------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHHh
Confidence            6654422111              1135667778888888888888888888888887432      5666777788899


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +|..+|+.+++++.+..+|++.|.+.++..+++.+..+
T Consensus       157 ~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~  194 (417)
T PRK10489        157 LGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL  194 (417)
T ss_pred             HHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999998888999999887766655554433

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.40  E-value=6e-12  Score=130.34  Aligned_cols=154  Identities=9%  Similarity=0.075  Sum_probs=121.1

Q ss_pred             HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019064           35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG  114 (346)
Q Consensus        35 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~  114 (346)
                      ...+.+++..++|++..+.+++.+.+..+..++.+++|+++||+ |||+++++++++..++.++..++.           
T Consensus       186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~-----------  253 (742)
T TIGR01299       186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQ-----------  253 (742)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence            44555677778999999999999999999999999999999996 999999999988888877665542           


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc--
Q 019064          115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID--  192 (346)
Q Consensus       115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~--  192 (346)
                              +.+.+++++++.|+|.|+..+...++++|.++.+.      |+..++++.....+|.++++.++..+...  
T Consensus       254 --------s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G  319 (742)
T TIGR01299       254 --------GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG  319 (742)
T ss_pred             --------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                    46778889999999999999999999999998432      56677777777788888877665444322  


Q ss_pred             -----------cchhHHHHHHHHHHHHHHHHHH
Q 019064          193 -----------QGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       193 -----------~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                                 .+|++.|++.++..+++++..+
T Consensus       320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~  352 (742)
T TIGR01299       320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT  352 (742)
T ss_pred             chhccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                       3688888877666555544433

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.40  E-value=1e-11  Score=121.07  Aligned_cols=183  Identities=10%  Similarity=-0.070  Sum_probs=120.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .+..|.+.+..++..++++.+.+.++.|+++++|++..+.+.+.+.+.....+++++.|+++||+ |||++++++..+..
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~   87 (420)
T PRK09528          9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL   87 (420)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence            45777878888888898988999999999999999999999999999999999999999999996 99999988766655


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++...+......+..               ......+..+.++..+.......+...+..++.    .+.+...++....
T Consensus        88 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~g~~~~  148 (420)
T PRK09528         88 VLFGPFFIYVFAPLL---------------QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV----SRRSGFEYGRARM  148 (420)
T ss_pred             HHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH----HhhccccchhhHH
Confidence            544322221100000               001112222223333322222222222222111    1113344555566


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      ..++|..+++.+.+++.+ .+|+..|.+.++..++++++.+..+
T Consensus       149 ~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~  191 (420)
T PRK09528        149 WGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAK  191 (420)
T ss_pred             hhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccc
Confidence            689999999999998876 5899999887766665555554433

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.40  E-value=9.4e-12  Score=122.90  Aligned_cols=145  Identities=10%  Similarity=0.037  Sum_probs=121.8

Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064           45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA  124 (346)
Q Consensus        45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~  124 (346)
                      +++++..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.++......                 ...
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-----------------~~~  131 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-----------------GGI  131 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH-----------------cCc
Confidence            6889999999999999999999999999999996 9999999999888887766544321                 124


Q ss_pred             HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc-chhHHHHHHH
Q 019064          125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ-GWWLGFLISS  203 (346)
Q Consensus       125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~  203 (346)
                      ..+++.+++.|++.+...+....+.+|.+++++      |+...++++.+.++|.++++.+.+++.+.. ||+..|.+.+
T Consensus       132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~  205 (465)
T TIGR00894       132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG  205 (465)
T ss_pred             hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence            568889999999999999999999999998433      678888888899999999999999998884 9999999887


Q ss_pred             HHHHHHHHHH
Q 019064          204 VATLIGLIAL  213 (346)
Q Consensus       204 ~~~~~~~~i~  213 (346)
                      +..++..+++
T Consensus       206 ~~~~~~~~~~  215 (465)
T TIGR00894       206 IVGCAWSLLW  215 (465)
T ss_pred             HHHHHHHHHH
Confidence            7655444433

>PRK03699 putative transporter; Provisional

Probab=99.40  E-value=9.5e-12  Score=120.31  Aligned_cols=171  Identities=13%  Similarity=0.119  Sum_probs=130.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .+..+.+.+..++.-.+++++..+++.|+++.+|++..+++.+.+.+.....++.+++|+++||+ ||++.+.....+..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~  282 (394)
T PRK03699        204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLAL  282 (394)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHH
Confidence            34566677777777888889999999999999999999999999998889999999999999996 99998887766655


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++..++...   +                +.....+..++.+++.++..+...++..|+.+++.       ....++.+.
T Consensus       283 ~~~~~~~~~---~----------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~  336 (394)
T PRK03699        283 VLMYLFVNT---D----------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVAS-------PKLVNFILT  336 (394)
T ss_pred             HHHHHHHHc---C----------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-------HHHHHHHHH
Confidence            554433321   1                12334445667778778888888888888776443       233566677


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      +.++|+.+++.+.+++.+..|++..|.+.+++.+++.+
T Consensus       337 ~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~  374 (394)
T PRK03699        337 CGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV  374 (394)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence            78999999999999999999999998876666555543

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.40  E-value=5e-12  Score=123.42  Aligned_cols=143  Identities=15%  Similarity=0.245  Sum_probs=118.1

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHH
Q 019064           48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYF  127 (346)
Q Consensus        48 ~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~  127 (346)
                      .+..+.+.+.+.+.....++.++.|+++||+ |||+++.++.++..++.++..+...                ..+.+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~  130 (481)
T TIGR00879        68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF----------------ALSVEML  130 (481)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHH
Confidence            4488999999999999999999999999996 9999999999999988877765431                1234678


Q ss_pred             HHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhhccchhHHHHHHHH
Q 019064          128 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI---VYVFIDQGWWLGFLISSV  204 (346)
Q Consensus       128 ~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~---~~i~~~~g~~~~f~i~~~  204 (346)
                      ++++++.|+|.|...+...++.+|.+++++      |...+++++...++|.++++.+.   ....+..+|++.|.+.++
T Consensus       131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~  204 (481)
T TIGR00879       131 IVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLI  204 (481)
T ss_pred             HHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHH
Confidence            899999999999999999999999998544      56778888889999999999988   666677899999998665


Q ss_pred             HHHHHHHHH
Q 019064          205 ATLIGLIAL  213 (346)
Q Consensus       205 ~~~~~~~i~  213 (346)
                      ..++.++..
T Consensus       205 ~~~~~~~~~  213 (481)
T TIGR00879       205 PAGLLFLGL  213 (481)
T ss_pred             HHHHHHHHH
Confidence            554444433

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.39  E-value=1.6e-11  Score=118.67  Aligned_cols=178  Identities=11%  Similarity=-0.037  Sum_probs=130.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.+|......++...++....+.++.|+++++|++..+.+.+.+.+.....++.+++|+++||+ |||+.++.+.....+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~   80 (396)
T TIGR00882         2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV   80 (396)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence            4678888889999999999999999999999999999999999999999999999999999996 999999887776665


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +...+......+...           ......+.++.++.+++.+...+...++..|.-++        +...++.....
T Consensus        81 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~~~  141 (396)
T TIGR00882        81 LFAPFFIYVFGPLLQ-----------SNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--------SNFEYGKARMF  141 (396)
T ss_pred             HHHHHHHHHhhhHHH-----------HHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--------cccccchhhhh
Confidence            443322211101000           01123345556677888887777777766553221        12345566677


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      .++|.++++.+++.+.+ .+|+..|.+.+++.++..++.
T Consensus       142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~  179 (396)
T TIGR00882       142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL  179 (396)
T ss_pred             cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence            89999999999888865 699999988776655544333

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.39  E-value=2e-11  Score=121.31  Aligned_cols=173  Identities=11%  Similarity=0.082  Sum_probs=124.0

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      ++++.........++..+..+++... ..++.+++|++..+.+++...+.....++.+++|+++||+ |||+++..+.++
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~  110 (476)
T PLN00028         33 PHMRAFHLSWISFFTCFVSTFAAAPL-LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLML  110 (476)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHH
Confidence            34556666666666666666655443 4466788999999999988888888888999999999996 999999998888


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++.++...+.                   +...+++.+++.|++.+...+ ....++|.++++.      |....+..
T Consensus       111 ~~~~~~~~~~~~-------------------s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~g~~  164 (476)
T PLN00028        111 TAPAVFCMSLVS-------------------SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTANGIA  164 (476)
T ss_pred             HHHHHHHHHHhc-------------------CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHHHHH
Confidence            888776655542                   345667778888988876543 4556788887543      56666666


Q ss_pred             HHHHHHHHHHHHhhhhhhh----h-----ccchhHHHHHHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVF----I-----DQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~----~-----~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      +...++|+.+++.+.+.+.    +     ..||++.|.+.+++.++..++
T Consensus       165 ~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~  214 (476)
T PLN00028        165 AGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL  214 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH
Confidence            6666777777766554442    2     258999999887766544443

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.39  E-value=1.8e-11  Score=122.05  Aligned_cols=176  Identities=15%  Similarity=0.105  Sum_probs=122.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHH-HH-----HHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGA-SN-----TLTNFFGSTFLLCLVGGFISDTYLSRFATCLV   87 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a-~~-----~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~   87 (346)
                      ++......+..++|.+.+.. ......++.++++.+..+. +.     +.++......++.+++|+++||+ |||+++.+
T Consensus        15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~   92 (490)
T PRK10642         15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI   92 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence            45566666777888877754 4455567777775433221 11     13445566778999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      +.++..++.++..++   |+...        ..-.....+++.+++.|+|.|+..++..++.+|.+|++.      |+..
T Consensus        93 ~~~l~~i~~~~~a~~---~~~~~--------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~  155 (490)
T PRK10642         93 TIVIMSISTFCIGLI---PSYAT--------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFM  155 (490)
T ss_pred             HHHHHHHHHHHHHhc---ccHHH--------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHH
Confidence            999999998887765   22100        000011347889999999999999999999999998654      4556


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHH
Q 019064          168 FNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI  208 (346)
Q Consensus       168 f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~  208 (346)
                      ..+...+.++|.+++..+...+.        .++|||+.|.+.++..++
T Consensus       156 ~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~  204 (490)
T PRK10642        156 GSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII  204 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence            66666677777777765544332        258999999986654443

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.38  E-value=1.2e-11  Score=122.26  Aligned_cols=149  Identities=11%  Similarity=0.089  Sum_probs=116.1

Q ss_pred             HHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC
Q 019064           40 LYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCL  119 (346)
Q Consensus        40 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~  119 (346)
                      ..+.+++|.+..+++.+.+.+.....++.+++|+++||+ |||++++.+.++..++.+++..+.                
T Consensus        43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----------------  105 (455)
T TIGR00892        43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSS----------------  105 (455)
T ss_pred             HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhh----------------
Confidence            345578999999999999999888889999999999996 999999999888888877665542                


Q ss_pred             CchhHHHHHH-HHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHH
Q 019064          120 KGAIAAYFYG-SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLG  198 (346)
Q Consensus       120 ~~~~~~~~~~-~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~  198 (346)
                         +.+.+++ .+.+.|++.|...+...+...|.++ ++      |....++.+.+.++|..+++.+.+++.+.+||+++
T Consensus       106 ---~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~  175 (455)
T TIGR00892       106 ---NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS  175 (455)
T ss_pred             ---hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence               2334443 3467788888765555667777774 21      57778888889999999999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 019064          199 FLISSVATLIGLIALAI  215 (346)
Q Consensus       199 f~i~~~~~~~~~~i~~~  215 (346)
                      |.+.+++.+++.+..++
T Consensus       176 f~~~~~~~~~~~v~~~~  192 (455)
T TIGR00892       176 FLILGGLLLHCCVCGAL  192 (455)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99988776655544433

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.36  E-value=2.1e-11  Score=120.69  Aligned_cols=176  Identities=14%  Similarity=0.080  Sum_probs=127.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +.+|.+.+..++....++++..+++.|+++.+|++..+++.....+.....++.+++|+++||+ |||+.+.+...+..+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~  336 (467)
T PRK09556        258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI  336 (467)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence            4577788888888888999999999999999999999999998888889999999999999996 988877665444443


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++.+..  .               .+....++.+++.|++..+..........|.+|++.      ++...+.....
T Consensus       337 ~~~~~~~~~--~---------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~  393 (467)
T PRK09556        337 IFTLGVYQH--A---------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTF  393 (467)
T ss_pred             HHHHHHHHh--c---------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHH
Confidence            332222211  0               123334455555665443333333355668887543      56677777777


Q ss_pred             HHH-HHHHHHhhhhhhhh------------ccchhHHHHHHHHHHHHHHHHHH
Q 019064          175 TTL-AAMIGVTAIVYVFI------------DQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       175 ~ni-G~~i~~~~~~~i~~------------~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .++ |..+++.+.+++.+            ..||..+|.+..++.+++.+..+
T Consensus       394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~  446 (467)
T PRK09556        394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA  446 (467)
T ss_pred             HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence            886 77889999999988            57899999888777777665544

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.36  E-value=1.2e-11  Score=117.51  Aligned_cols=177  Identities=17%  Similarity=0.157  Sum_probs=135.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHHH-HHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATCL-VFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~l-GR~~~i~-~~~~l~   92 (346)
                      |.+|+++++.++-.+.-||+..+.|+|+.+..|++..+++...+.|......++++.||+||+++ |||..+. +++++.
T Consensus       252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i  331 (448)
T COG2271         252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI  331 (448)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999998 7776554 444444


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .+..+.+..+   |              ..+..+..+.++++|+-.-|..-.+.....|..|.+..+      +.-...-
T Consensus       332 ~~~~~~~w~~---~--------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaG------tA~Gf~G  388 (448)
T COG2271         332 TASLVLYWLA---P--------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAG------TATGFVG  388 (448)
T ss_pred             HHHHHHHHcC---C--------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhcc------chhchhh
Confidence            5555555543   2              225677777788888887777766666666777654433      2222223


Q ss_pred             HHHHH-HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          173 FATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       173 ~~~ni-G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ++..+ |+.++....+++.|.+||..+|.+..+..+++.+.++
T Consensus       389 lf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~  431 (448)
T COG2271         389 LFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL  431 (448)
T ss_pred             hHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence            34566 8889989999999989999999876666555555443

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.35  E-value=2.1e-11  Score=120.51  Aligned_cols=152  Identities=14%  Similarity=0.141  Sum_probs=115.6

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhcc-CCCCCCCCCCCCCCCchhH
Q 019064           46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYS-KSLHPPDCGKSSCLKGAIA  124 (346)
Q Consensus        46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~-p~~~~~~~~~~~~~~~~~~  124 (346)
                      +|.+..+.+++.+.+.....++++++|+++||+ |||++++++.+++.++.++..+.... .....        .+....
T Consensus        50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--------~~~~~~  120 (479)
T PRK10077         50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIGP--------DNTGYV  120 (479)
T ss_pred             ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccccccccc--------cchhHH
Confidence            488899999999999999999999999999996 99999999999988887666543210 00000        011235


Q ss_pred             HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--------hhccchh
Q 019064          125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWW  196 (346)
Q Consensus       125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i--------~~~~g~~  196 (346)
                      ..+++++++.|++.|+..+...++++|.++++.      |+..++.+..+..+|.++++.+...+        .+..||+
T Consensus       121 ~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr  194 (479)
T PRK10077        121 PEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWR  194 (479)
T ss_pred             HHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChH
Confidence            677899999999999999999999999999543      56667777777888888876654433        2457999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 019064          197 LGFLISSVATLIGLIA  212 (346)
Q Consensus       197 ~~f~i~~~~~~~~~~i  212 (346)
                      +.|.+.++..++..+.
T Consensus       195 ~~f~~~~~~~~~~~~~  210 (479)
T PRK10077        195 YMFASEAIPALLFLML  210 (479)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9998876665554443

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.35  E-value=6.9e-11  Score=114.31  Aligned_cols=174  Identities=17%  Similarity=0.089  Sum_probs=120.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ++..+..+...++-...++....+++.|+++++|++..+++.+.....+...++.+++|+++||+ |||+.+..+.....
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~  293 (393)
T PRK15011        215 RRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGV  293 (393)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence            34444444444444455656667889999999999999988888777777778889999999996 99998877665544


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      +....+...   +                +.+.+.+.+.+.+++.|...+...+...|.++++       ++...+++..
T Consensus       294 ~~~~~~~~~---~----------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~~~~~~~  347 (393)
T PRK15011        294 CFYAGMLMA---H----------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSATTLYTN  347 (393)
T ss_pred             HHHHHHHHH---h----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchHHHHHHH
Confidence            443222211   1                2333444555555555555555556666777642       3556666667


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++|..+++.+.+++.+..||+..|.+..++.++++++.+
T Consensus       348 ~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~  388 (393)
T PRK15011        348 TSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLL  388 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999989999999887777766666554

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.34  E-value=4.9e-11  Score=117.57  Aligned_cols=169  Identities=9%  Similarity=0.028  Sum_probs=122.9

Q ss_pred             HHHHHHHHHHHHHHHHh---HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIAN---GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv---~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.++...++....+|..   .....+|+.++ |++..+.+.+.+.+.....++.+++|+++||+ |||++++++.++..+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i  105 (452)
T PRK11273         28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAA  105 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHH
Confidence            34444444444444433   23445577777 99999999999999999999999999999996 999999999998888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++.+...   .            ..+.+.+++.+.+.+++.|...+.......|.+++++      |....++++.+
T Consensus       106 ~~~~~~~~~~---~------------~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~  164 (452)
T PRK11273        106 VMLFMGFVPW---A------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA  164 (452)
T ss_pred             HHHHHHhhhc---c------------cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHH
Confidence            8776665421   0            1145667788889999999888888888889887433      56777777888


Q ss_pred             HHHHHH-HHHhhhhhhhhccchhHHHHHHHHHHHHH
Q 019064          175 TTLAAM-IGVTAIVYVFIDQGWWLGFLISSVATLIG  209 (346)
Q Consensus       175 ~niG~~-i~~~~~~~i~~~~g~~~~f~i~~~~~~~~  209 (346)
                      .++|+. +++.....+....||++.|.+.++..++.
T Consensus       165 ~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~  200 (452)
T PRK11273        165 HNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILV  200 (452)
T ss_pred             HHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            888864 45544333333459999999877655543

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.34  E-value=6.7e-12  Score=124.26  Aligned_cols=150  Identities=8%  Similarity=-0.095  Sum_probs=120.0

Q ss_pred             HHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 019064           39 VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC  118 (346)
Q Consensus        39 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~  118 (346)
                      ...+.+++|++..+.+++.+.+.....++.+++|+++||+ |||+++.++.++..++..++.....  ..          
T Consensus        52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--~~----------  118 (467)
T PRK09556         52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG--SG----------  118 (467)
T ss_pred             hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--cc----------
Confidence            4567789999999999999999999999999999999996 9999999888888777666554310  00          


Q ss_pred             CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc---ch
Q 019064          119 LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ---GW  195 (346)
Q Consensus       119 ~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~---g~  195 (346)
                        ..+.+.+++.+.+.|++.+...|...++.+|.+++++      |...++++..+.++|.++++.+..++.+..   +|
T Consensus       119 --~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~  190 (467)
T PRK09556        119 --SVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHV  190 (467)
T ss_pred             --cchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhccCcc
Confidence              2257788889999999999999999999999999654      566777777788999999988877665543   58


Q ss_pred             hHHHHHHHHHHHHH
Q 019064          196 WLGFLISSVATLIG  209 (346)
Q Consensus       196 ~~~f~i~~~~~~~~  209 (346)
                      +..|.++++..++.
T Consensus       191 ~~~f~~~g~~~~~~  204 (467)
T PRK09556        191 IGMFIFPSIIALII  204 (467)
T ss_pred             hhHHHHHHHHHHHH
Confidence            88888766655443

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.33  E-value=3.2e-11  Score=118.41  Aligned_cols=152  Identities=10%  Similarity=0.054  Sum_probs=119.5

Q ss_pred             HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064           38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS  117 (346)
Q Consensus        38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~  117 (346)
                      ...++++ +|.+..+.+++.+.+.....++.+++|+++||+ |||+.+.++.++..++.+++...   |..         
T Consensus        49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~~~---------  114 (438)
T TIGR00712        49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFV---PWA---------  114 (438)
T ss_pred             hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcc---ccc---------
Confidence            3456665 599999999999999999999999999999996 99999999888888877665443   211         


Q ss_pred             CCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-hhhccchh
Q 019064          118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY-VFIDQGWW  196 (346)
Q Consensus       118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~-i~~~~g~~  196 (346)
                         ..+...+++.+++.+++.|...+.......|.+++++      |+..+++++...++|+.+++.+.+. +..+.+|+
T Consensus       115 ---~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~  185 (438)
T TIGR00712       115 ---TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH  185 (438)
T ss_pred             ---cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence               1135566777888999999988888899999998654      5778888888899999888877665 44457999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 019064          197 LGFLISSVATLIGLIA  212 (346)
Q Consensus       197 ~~f~i~~~~~~~~~~i  212 (346)
                      ..|.+.++..++..++
T Consensus       186 ~~f~~~~~~~~i~~~~  201 (438)
T TIGR00712       186 AALYFPAICAIIVALF  201 (438)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999877766554433

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.33  E-value=8.8e-11  Score=117.04  Aligned_cols=176  Identities=14%  Similarity=0.140  Sum_probs=119.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ++.....+...++..+.||++..+++.|+++.+|++..++............++.+++|+++||+ |||+++.++.++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~  327 (490)
T PRK10642        249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALF  327 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence            34444444455667789999999999999988999988877777777778888899999999996 99999888776544


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.+.+....  .              ..+...+++++++.+++.++..+...++..+.+|++.      |.+..++.|.
T Consensus       328 ~~~~~~~~~~--~--------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~~  385 (490)
T PRK10642        328 VLAIPAFILI--N--------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAFN  385 (490)
T ss_pred             HHHHHHHHHH--h--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHHH
Confidence            4332222211  0              0124456667777777766666667777788888654      5666776555


Q ss_pred             HHHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i  212 (346)
                      ..++++.+++.+.+++.+.. +|+..+.+..+..+++++.
T Consensus       386 ~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~  425 (490)
T PRK10642        386 ISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT  425 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence            56666777888888887654 3565554444333333333

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.33  E-value=7.3e-11  Score=113.97  Aligned_cols=173  Identities=20%  Similarity=0.113  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhh
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQA  103 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~  103 (346)
                      ..+..+++.++..+++.|+.+ .|.+  +++.....+.....++.++.|+++||+ ||+|.+.++..+..++.+++....
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~  300 (399)
T PRK05122        225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP  300 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc
Confidence            344566777777888888864 4653  345555667777788889999999996 999998888877777766555421


Q ss_pred             ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHH
Q 019064          104 YSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGV  183 (346)
Q Consensus       104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~  183 (346)
                                         +.+.+++..++.++|.+...+.......|.++++      .+++.+++++...++|..+++
T Consensus       301 -------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~~g~~~g~~~~~~~~g~~~~~  355 (399)
T PRK05122        301 -------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQ------NRGAALGAYSVFLDLSLGITG  355 (399)
T ss_pred             -------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHHHHHHHHHHH
Confidence                               2345566778899999888888777777777632      267888888888999999899


Q ss_pred             hhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCC
Q 019064          184 TAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQP  225 (346)
Q Consensus       184 ~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p  225 (346)
                      .+.+++.+..||+..|.+.+++.++++++....+++.+++.|
T Consensus       356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  397 (399)
T PRK05122        356 PLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAPRAVP  397 (399)
T ss_pred             HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence            899999998999999998888777777666655555555444

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.32  E-value=9.1e-11  Score=109.72  Aligned_cols=174  Identities=21%  Similarity=0.209  Sum_probs=148.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-HHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-~i~~~~~l~~   93 (346)
                      |..+.+....++....+......++.|+.+.+|.+..+.+...........++.++.|+++||+ ||++ .+.++..+..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~  253 (352)
T cd06174         175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAA  253 (352)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHH
Confidence            4566777778888888889999999999988899999999999999999999999999999996 9999 8988888888


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.+++....                   +.+..++...+.+++.+...+...++..|..++++      +++.++.+..
T Consensus       254 i~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  308 (352)
T cd06174         254 LGLLLLALAP-------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNT  308 (352)
T ss_pred             HHHHHHHHhc-------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHH
Confidence            8877666532                   24567788889999999999999999999998533      6788888899


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++|..+++.+.+++.++.+|+..|.+.++..+++.++..
T Consensus       309 ~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         309 FGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL  349 (352)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence            99999999999999999889999999988887776666543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.32  E-value=5.4e-11  Score=112.67  Aligned_cols=171  Identities=13%  Similarity=0.079  Sum_probs=130.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +..+.+....++..+.+.......+.|. +++|.+..+++.+...+.....++.++.|+++||+ ||++.+.++..+..+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~  282 (377)
T TIGR00890       205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV  282 (377)
T ss_pred             ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence            3445555555666666666666677775 46888888888888888989999999999999996 999999988888888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++...   +.              .....++....+.+++.|...+..+++..|.+++++      +.+.+++++..
T Consensus       283 ~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~  339 (377)
T TIGR00890       283 GMAAMLFI---PM--------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTA  339 (377)
T ss_pred             HHHHHHHc---cc--------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHH
Confidence            76665443   11              112334455667788888888888888899988543      57788888889


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL  210 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~  210 (346)
                      .++|..+++.+.+++.++.||+..|.+.+++.+++.
T Consensus       340 ~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~  375 (377)
T TIGR00890       340 KAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL  375 (377)
T ss_pred             HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence            999999999999999999999999988777665544

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.31  E-value=1.1e-10  Score=116.64  Aligned_cols=179  Identities=12%  Similarity=0.064  Sum_probs=127.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHccc----ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKN----EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF   88 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~----~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~   88 (346)
                      +.+.+.++.+..+.+.+....+....+..-.+    +.+.+..+.+.+.+.+..+..++.++.|+++||+ |||+++.++
T Consensus        14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~   92 (502)
T TIGR00887        14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGME   92 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHH
Confidence            34555556666666666554444433332211    2345566777888889999999999999999996 999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064           89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF  168 (346)
Q Consensus        89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f  168 (346)
                      ++++.++.++..++.   ...          +..+...+++++++.|+|.|+..+....+.+|.+|.+.      |+...
T Consensus        93 ~~~~~v~~~~~~~~~---~~~----------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~  153 (502)
T TIGR00887        93 LIIMIIATVASGLSP---GSS----------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMM  153 (502)
T ss_pred             HHHHHHHHHHHHHcc---Ccc----------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHH
Confidence            999999877666542   110          01235678999999999999999999999999999654      67777


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhh-----------------------ccchhHHHHHHHHHHHHHHH
Q 019064          169 NFYLFATTLAAMIGVTAIVYVFI-----------------------DQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       169 ~~~y~~~niG~~i~~~~~~~i~~-----------------------~~g~~~~f~i~~~~~~~~~~  211 (346)
                      ++.+...++|.++++.+...+..                       +.+||+.|.+.++..++..+
T Consensus       154 ~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~  219 (502)
T TIGR00887       154 AAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY  219 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH
Confidence            88888888888888776554321                       24799999876665544433

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK09952 shikimate transporter; Provisional

Probab=99.31  E-value=9.9e-11  Score=115.04  Aligned_cols=177  Identities=18%  Similarity=0.179  Sum_probs=118.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHccccc--CCchhHHHHHHH-----HHHHHHHHHHHHHHHHhhhcccchhHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEM--HFDIAGASNTLT-----NFFGSTFLLCLVGGFISDTYLSRFATC   85 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l--g~s~~~a~~~~~-----~~~~~~~~~~llgG~laD~~lGR~~~i   85 (346)
                      ++|......+..++|-+.+.......+.++.+++  +.++.. +.+..     +......++.++.|+++||+ |||+++
T Consensus        20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l   97 (438)
T PRK09952         20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML   97 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence            3455666666777777766554444444555444  555553 33321     11223446667789999996 999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064           86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA  165 (346)
Q Consensus        86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~  165 (346)
                      .++.+++.++.++..++   |+...        ..-.....+++.+++.|+|.|+..+....+..|.+|++.      |+
T Consensus        98 ~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg  160 (438)
T PRK09952         98 MLTVWMMGIATALIGLL---PSFST--------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KA  160 (438)
T ss_pred             HHHHHHHHHHHHHHhcC---CcHHH--------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------Cc
Confidence            99999999988877764   22110        000112357788999999999999999999999998654      45


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHH
Q 019064          166 SYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLI  208 (346)
Q Consensus       166 ~~f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~  208 (346)
                      ...+....+..+|.+++..+..++.        ..+|||..|.+.++..++
T Consensus       161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~  211 (438)
T PRK09952        161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI  211 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence            5666667777888887766655543        257999999987765443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.30  E-value=1.6e-10  Score=113.36  Aligned_cols=175  Identities=16%  Similarity=0.106  Sum_probs=118.0

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHH-HHHHHH-HHH----HHHHHHHHHhhhcccchhH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNT-LTNFFG-STF----LLCLVGGFISDTYLSRFAT   84 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~-~~~~~~-~~~----~~~llgG~laD~~lGR~~~   84 (346)
                      ..+++.....++..+++.+....+... ...+.++++.+..+.+.. .+.... ..+    ++.++.|+++||+ ||||.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~   88 (434)
T PRK15075         11 ESKARAILRVTSGNFLEMFDFFLFGFY-ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKG   88 (434)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHH
Confidence            344556666666667766666555444 446777888877665433 332222 222    4678899999996 99999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064           85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL  164 (346)
Q Consensus        85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~  164 (346)
                      ++.+.++..++.++..++.   +...        ........+++++++.|++.|+..++...+.+|.+|++.      |
T Consensus        89 l~~~~~~~~~~~~l~~~~~---~~~~--------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r  151 (434)
T PRK15075         89 LIVTLSIMASGTLLIAFVP---GYAT--------IGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K  151 (434)
T ss_pred             HHHHHHHHHHHHHHHHhCC---cHHH--------HHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c
Confidence            9999999999888777642   1100        000001246788999999999999999999999998654      5


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhh--------hhccchhHHHHHHHH
Q 019064          165 ASYFNFYLFATTLAAMIGVTAIVYV--------FIDQGWWLGFLISSV  204 (346)
Q Consensus       165 ~~~f~~~y~~~niG~~i~~~~~~~i--------~~~~g~~~~f~i~~~  204 (346)
                      ....+++....++|..+++.++..+        .+.+||++.|.+.++
T Consensus       152 g~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~  199 (434)
T PRK15075        152 GFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL  199 (434)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence            6666666666666666665555443        346899999987543

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.29  E-value=1.3e-10  Score=126.94  Aligned_cols=156  Identities=12%  Similarity=0.085  Sum_probs=120.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+.+...+...++.++...+....+..++...++.+.  ...+++.+++.....++.+++|+++||+ |||++++++.++
T Consensus         8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~   86 (1146)
T PRK08633          8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF   86 (1146)
T ss_pred             hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence            3455555566666666666665666666655555543  3357778888889999999999999996 999999998887


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++.++..+...                ..+.+.+++.+++.|++.+...+...++++|.+++++      ++..++++
T Consensus        87 ~~~~~~~~~~~~~----------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~  144 (1146)
T PRK08633         87 EVGLTLLIVLAYY----------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLL  144 (1146)
T ss_pred             HHHHHHHHHHHHH----------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHH
Confidence            7776655554421                1146788899999999999999999999999998654      67888999


Q ss_pred             HHHHHHHHHHHHhhhhhhhhc
Q 019064          172 LFATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~  192 (346)
                      ..+.++|.++|+.+++++.+.
T Consensus       145 ~~~~~ig~~lg~~l~~~l~~~  165 (1146)
T PRK08633        145 EAFTIVAILAGTALFSFLFES  165 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999888765

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.29  E-value=2e-10  Score=125.55  Aligned_cols=165  Identities=11%  Similarity=0.107  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHcccccCCchhH-HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH--HHHHHH
Q 019064           21 FVLSALENMGFIANGISMVLYFKNEMHFDIAG-ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL--EVLSLV   97 (346)
Q Consensus        21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~-a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l--~~~G~~   97 (346)
                      ++..+.+++....+....+..+++..+.+... .+.+..++.....++.+++|+++||+ |||+++.....+  ...+..
T Consensus        21 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~   99 (1140)
T PRK06814         21 FFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALA   99 (1140)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHH
Confidence            34444445544444333333344444443333 55666778888899999999999997 999986442222  222222


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++....                  .+.+.+++.+++.|++.+...|...+++.|.+++++      +....++...+.++
T Consensus       100 ~~~~~~------------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~i  155 (1140)
T PRK06814        100 IYGFHL------------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFI  155 (1140)
T ss_pred             HHHHHH------------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHH
Confidence            222111                  146789999999999999999999999999998654      67888999999999


Q ss_pred             HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL  210 (346)
Q Consensus       178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~  210 (346)
                      |.++|+.+++++....||+..|.+.++..++++
T Consensus       156 g~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~  188 (1140)
T PRK06814        156 AILLGTIIGGLATISGNFVILVALLMGIAVLGW  188 (1140)
T ss_pred             HHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence            999999999999998999988844444333333

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.28  E-value=1.7e-10  Score=109.80  Aligned_cols=171  Identities=13%  Similarity=0.040  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+.+....++....+......++.|+++++|.+..+++.+.....+....+.+++|+++||+ |||+++.++.++..++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~  279 (375)
T TIGR00899       201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY  279 (375)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence            33334444444444555566788899889999999888887776666777788999999996 99999887766555444


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      .++....                   +.+.+++...+.+++.|...+...++..|..+++       +++.++.++...+
T Consensus       280 ~~~~~~~-------------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  333 (375)
T TIGR00899       280 TGLAADN-------------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYTNTGR  333 (375)
T ss_pred             HHHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHHHHHH
Confidence            3333221                   2344555566677777777777777777777532       3477788888899


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +|..+++.+.+++.+..||+..|.+.+++.+++.++..
T Consensus       334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~  371 (375)
T TIGR00899       334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL  371 (375)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence            99999999999999989999999988877776666544

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00896 CynX cyanate transporter

Probab=99.28  E-value=4.8e-11  Score=113.47  Aligned_cols=157  Identities=12%  Similarity=0.089  Sum_probs=121.4

Q ss_pred             HHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhcc
Q 019064           26 LENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYS  105 (346)
Q Consensus        26 ~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~  105 (346)
                      +|...++.....+.+.+.+++|++..+++.+.+.+.....++.++.|+++||+ ||||++.++.++..++.++. ..   
T Consensus        10 ~~~~~~~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~---   84 (355)
T TIGR00896        10 LNLRPALTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA---   84 (355)
T ss_pred             hcccCccccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh---
Confidence            34444444445555677779999999999999999999999999999999996 99999999988877776554 21   


Q ss_pred             CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064          106 KSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA  185 (346)
Q Consensus       106 p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~  185 (346)
                      +                +.+.+++.+++.++|.+...+.......|.+++ +      +.+.++.++...++|..+++.+
T Consensus        85 ~----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~i~~~~  141 (355)
T TIGR00896        85 P----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGLMTGLYSMALMGGAALAAAA  141 (355)
T ss_pred             c----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHH
Confidence            1                345677889999999998888888888777753 1      4667788888899999999988


Q ss_pred             hhhhhhcc--chhHHHHHHHHHHHHHH
Q 019064          186 IVYVFIDQ--GWWLGFLISSVATLIGL  210 (346)
Q Consensus       186 ~~~i~~~~--g~~~~f~i~~~~~~~~~  210 (346)
                      .+++.++.  +|+..|.+.++..++..
T Consensus       142 ~~~l~~~~~~~w~~~f~~~~~~~~~~~  168 (355)
T TIGR00896       142 TVPLAQHSGGHWQQALAWWALPALLAL  168 (355)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence            88887654  38888877655444433

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.28  E-value=3.1e-10  Score=109.90  Aligned_cols=177  Identities=10%  Similarity=-0.043  Sum_probs=134.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .+..|.+....++..++++++..+++.|+.+ +|.+..+++.....+.+...++.++.|+++||+ ||++.+.++..+..
T Consensus       204 ~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~  281 (393)
T PRK09705        204 TPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQL  281 (393)
T ss_pred             CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHH
Confidence            3456666666777788999999999999986 899999999999999999999999999999995 99999988887777


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++..++...   |.               .....  ...+.++|.++..+.......|++++++     .+++.+++.+.
T Consensus       282 ~~~~~~~~~---~~---------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~  336 (393)
T PRK09705        282 VGFCGFIWL---PL---------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFMQG  336 (393)
T ss_pred             HHHHHHHHc---cc---------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHHHH
Confidence            776554322   21               11111  1235678888888877777778875321     25778888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064          174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      ..++++.+++.+.+++.+..| |...|.+.+++.++..+..+...
T Consensus       337 ~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  381 (393)
T PRK09705        337 IGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFA  381 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999876 78888887776666655544433

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.28  E-value=2.8e-10  Score=112.42  Aligned_cols=198  Identities=15%  Similarity=0.087  Sum_probs=136.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchhHHHHH-HHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCLVF-GTL   91 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~~i~~~-~~l   91 (346)
                      ....+....+.-.++|-...+++..|+ +.+|.+...++.+..+......+..|+.|+++||   .+||||.++++ ...
T Consensus         5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~   83 (477)
T TIGR01301         5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL   83 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence            445555556666777766667777776 5799999999999999999999999999999996   45999998775 555


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++++++..+..+.......-+  .-......+.+.+++.+.-++.....+...++++|..++++++    .+..+.|.
T Consensus        84 ~~~~l~ll~~~~~~~~~~~~~~~--~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~~~  157 (477)
T TIGR01301        84 VAFAVILIGFAADIGHLFGDNLD--KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANAYF  157 (477)
T ss_pred             HHHHHHHHHhCchhhhhcccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHHHH
Confidence            55565555543211000000000  0000112245566666777788888888999999999976421    34678888


Q ss_pred             HHHHHHHHHHHHhhhhhh--hhc-------------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064          172 LFATTLAAMIGVTAIVYV--FID-------------QGWWLGFLISSVATLIGLIALAIGKPFY  220 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i--~~~-------------~g~~~~f~i~~~~~~~~~~i~~~~~~~~  220 (346)
                      .+..++|+++++.++++.  .+.             .+.+..|.+.+++++++.++.++..+++
T Consensus       158 ~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~  221 (477)
T TIGR01301       158 SFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN  221 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence            899999999999887764  111             1568889998888888777776655543

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK09952 shikimate transporter; Provisional

Probab=99.27  E-value=3.1e-10  Score=111.49  Aligned_cols=179  Identities=11%  Similarity=-0.009  Sum_probs=123.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +....++...++..+++|++..+++.|+++.+|++......+.........++.+++|+++||+ |||+++..+.++..+
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~  328 (438)
T PRK09952        250 GAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTL  328 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence            3344445567778889999999999999999999887655555556666777888999999995 999998877766555


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-  173 (346)
                      +.+.+....  ..             ......+++...+.+++.+...+...++.+|.+|.+.      |.+..++.|. 
T Consensus       329 ~~~~~~~~~--~~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~~  387 (438)
T PRK09952        329 SAFPFFMAL--EA-------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQV  387 (438)
T ss_pred             HHHHHHHHH--Hc-------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHHH
Confidence            443333221  00             0123334445566678888888888899999998643      4556666444 


Q ss_pred             HHHHHHHHHHhhhhhhhhcc--chhHHHHHHHHHHHHHHHHHHh
Q 019064          174 ATTLAAMIGVTAIVYVFIDQ--GWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~--g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +..+|+.++|.+.+++.+..  +|...+.+.+++.+++.+..+.
T Consensus       388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~  431 (438)
T PRK09952        388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL  431 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence            44588889999999987743  4777777666666666555443

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.27  E-value=1.9e-10  Score=112.17  Aligned_cols=175  Identities=16%  Similarity=0.140  Sum_probs=125.3

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchh-HHHHHHHHHHHHHHHH
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFA-TCLVFGTLEVLSLVML   99 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~-~i~~~~~l~~~G~~ll   99 (346)
                      ++...+.+..+..+++.|+++.+|++..+++.+..+......+..|+.|+++||.   +|||| .++++..+..++.+++
T Consensus         8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~   87 (437)
T TIGR00792         8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL   87 (437)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence            4556667777778899999999999999999999999999999999999999983   58865 5666777777776665


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA  179 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~  179 (346)
                      ...   |+..          .......+++...+.+++.+.......++.+|..++  ++|   |++...+.....++|+
T Consensus        88 ~~~---~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~---R~~~~~~~~~~~~~g~  149 (437)
T TIGR00792        88 FTT---PDFS----------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLD--PRE---RESLSTFRRFGATLGG  149 (437)
T ss_pred             HhC---CCCC----------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCC--HHH---HHHHHHHHHHHHHHHH
Confidence            542   3221          012345566666777888888888888888887654  333   5667777777788887


Q ss_pred             HHHHhhhhhhh-------hccchhHHHHHHHHHHHHHHHHHHhc
Q 019064          180 MIGVTAIVYVF-------IDQGWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       180 ~i~~~~~~~i~-------~~~g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      +++..+.+.+.       +..+|+..+.+.+++.++..++.+..
T Consensus       150 ~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~  193 (437)
T TIGR00792       150 LLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFG  193 (437)
T ss_pred             HHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcC
Confidence            77665544332       24689988887777665555544433

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.26  E-value=5e-11  Score=113.30  Aligned_cols=177  Identities=10%  Similarity=0.072  Sum_probs=151.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHH---HHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISM---VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l---~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      --+-++...++...+||-+.-|.   .+++.++.++|..|.+.+.+.+.+++.++-.+.|.++||. +.|+.+.+++++.
T Consensus        26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLils  104 (448)
T COG2271          26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILS  104 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHH
Confidence            34556677788888999888664   5788888999999999999999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .+-.+++..+.                   +.+.+.+-..+.|..+|.-.|.....++..|+.++      |++..+.+.
T Consensus       105 ai~nil~Gfs~-------------------s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~siWn  159 (448)
T COG2271         105 AIVNILFGFSP-------------------SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSIWN  159 (448)
T ss_pred             HHHHHHHhhhh-------------------HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEEeh
Confidence            88888888753                   46778888889999999999999999999999654      788888899


Q ss_pred             HHHHHHHHHHHhhh--hhhhhccchhHHHHHHHHHH-HHHHHHHHhcCc
Q 019064          173 FATTLAAMIGVTAI--VYVFIDQGWWLGFLISSVAT-LIGLIALAIGKP  218 (346)
Q Consensus       173 ~~~niG~~i~~~~~--~~i~~~~g~~~~f~i~~~~~-~~~~~i~~~~~~  218 (346)
                      .+.|+|+++.+.++  +++..+.+|+.+|.+|+++. ++++..+...+.
T Consensus       160 ~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd  208 (448)
T COG2271         160 TSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD  208 (448)
T ss_pred             hhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999998  89998899999999998754 555555555543

>TIGR00898 2A0119 cation transport protein

Probab=99.25  E-value=2.1e-10  Score=114.35  Aligned_cols=146  Identities=17%  Similarity=0.120  Sum_probs=117.4

Q ss_pred             HHcccccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064           40 LYFKNEMHFD---IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS  116 (346)
Q Consensus        40 ~yl~~~lg~s---~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~  116 (346)
                      .-+.+++|++   ..+.+.+.+.+.....++.++.|+++||+ |||++++++.++..++.++..++.             
T Consensus       113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~-------------  178 (505)
T TIGR00898       113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSP-------------  178 (505)
T ss_pred             ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHcc-------------
Confidence            3456688998   88899999999999999999999999995 999999999988888876665432             


Q ss_pred             CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchh
Q 019064          117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWW  196 (346)
Q Consensus       117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~  196 (346)
                            +.+.+++.+++.|++.++..+...++..|.++++.      |......+..+..+|.++++.++.++.+   |+
T Consensus       179 ------~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr  243 (505)
T TIGR00898       179 ------NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WR  243 (505)
T ss_pred             ------cHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HH
Confidence                  46778899999999999999999999999998543      4555666667778888888877665543   99


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 019064          197 LGFLISSVATLIGLIALA  214 (346)
Q Consensus       197 ~~f~i~~~~~~~~~~i~~  214 (346)
                      +.|.+.++..++..+..+
T Consensus       244 ~~~~~~~i~~~~~~~~~~  261 (505)
T TIGR00898       244 WLQLAVSLPTFLFFLLSW  261 (505)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999887766655544443

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.25  E-value=2.1e-10  Score=113.10  Aligned_cols=176  Identities=13%  Similarity=0.099  Sum_probs=118.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-cchhHH-HHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL-SRFATC-LVFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~l-GR~~~i-~~~~~l~   92 (346)
                      +.+|...+..++....++++..++|.|++++.|++..+++.....+.....++.+++|+++||+. ||++.. ...+.+.
T Consensus       253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~  332 (452)
T PRK11273        253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV  332 (452)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence            45677777788888888999999999999989999888888888888888889999999999952 444432 2233333


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.+++.+.   +.              .+.....+.+.+++.+..+.......+..|.+|++.      +++.+++.+
T Consensus       333 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~  389 (452)
T PRK11273        333 TIATIVYWLN---PA--------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG  389 (452)
T ss_pred             HHHHHHHHHh---cc--------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHHH
Confidence            3443333221   11              122233334444444333322333345667777543      577788888


Q ss_pred             HHHHHHHHH-HHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMI-GVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       173 ~~~niG~~i-~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      ...++|+.+ ++.+.+++.++.||+..|.+.++..+++++..
T Consensus       390 ~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~  431 (452)
T PRK11273        390 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL  431 (452)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence            878888654 78999999999999999988777665554433

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.24  E-value=3.7e-10  Score=110.10  Aligned_cols=174  Identities=9%  Similarity=0.036  Sum_probs=134.4

Q ss_pred             CCchHHHH-HHHHHHHHHHHHHHhHHHHHHHcccccCCchhH-HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           12 GGFRACTF-VFVLSALENMGFIANGISMVLYFKNEMHFDIAG-ASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        12 ~~~~~~~~-i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~-a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +.|+...+ +|+-.|+-.+=  ...+.+..|+.+++|++..+ .+.+..+|...+.++.+++|+++||+ |-|+++.++.
T Consensus        23 ~~W~~~~~~lC~fGF~~e~R--~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~   99 (511)
T TIGR00806        23 KSWRVLVLYLCFYGFMAQFR--PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQA   99 (511)
T ss_pred             cchhHHHHHHHHHHHHHHhh--chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHH
Confidence            34554443 55544443221  12345667999999999999 99999999999999999999999995 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      +...+..+++.++.                   +...+.+.+++.|+++|+.. ....+++..+|+   +|   |++..+
T Consensus       100 l~Wsl~t~L~~fa~-------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~---kE---R~rats  153 (511)
T TIGR00806       100 LSFVCVWLLLLLGT-------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPP---SR---YQRAAA  153 (511)
T ss_pred             HHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCH---HH---HHHHHH
Confidence            99988887777653                   46788999999999999999 999999999994   33   677778


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHH---HHHHHHHHHHHHHHHh
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGF---LISSVATLIGLIALAI  215 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f---~i~~~~~~~~~~i~~~  215 (346)
                      .+..+.++|.++++.+++++. .+||+.-+   .|+.....+++++-++
T Consensus       154 i~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~~a~~  201 (511)
T TIGR00806       154 YSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVFLALF  201 (511)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence            888899999999999998854 57887544   3555555555554433

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>TIGR00901 2A0125 AmpG-related permease

Probab=99.23  E-value=3.3e-10  Score=107.70  Aligned_cols=157  Identities=12%  Similarity=0.098  Sum_probs=111.5

Q ss_pred             hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchhHH-HHHHHHHHHHHHHHHhhhccCCC
Q 019064           34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFATC-LVFGTLEVLSLVMLTIQAYSKSL  108 (346)
Q Consensus        34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~~i-~~~~~l~~~G~~ll~l~~~~p~~  108 (346)
                      +.......+.+++|++..+.+......  ..+...++.|.++||+    +||||.+ +.+.++..+.+..+...   +. 
T Consensus         6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~--~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~---~~-   79 (356)
T TIGR00901         6 LVGNTLPYWLRSKNVSLKTIGFFSLVG--LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL---VP-   79 (356)
T ss_pred             hHHhHHHHHHHHcCCCHHHHHHHHHHH--HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC---Cc-
Confidence            334344444557899999998886542  2223478999999997    4999975 55565555554444432   21 


Q ss_pred             CCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 019064          109 HPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVY  188 (346)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~  188 (346)
                                  ..+.+.+.....+.+++.+...+...++..|.+++++      |+...++...+.++|.++++.++.+
T Consensus        80 ------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~  141 (356)
T TIGR00901        80 ------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALV  141 (356)
T ss_pred             ------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHH
Confidence                        1244555555556778888888999999999997533      6777888888899999999999888


Q ss_pred             hhhccc--------hhHHHHHHHHHHHHHHHHHH
Q 019064          189 VFIDQG--------WWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       189 i~~~~g--------~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +..+.|        |+..|.+.++..+++.++.+
T Consensus       142 l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~  175 (356)
T TIGR00901       142 LASPEFANTGLITLWGYIFFWTALLILPGLLVTL  175 (356)
T ss_pred             HhhhcccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            887777        99999988877666555444

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.23  E-value=9.1e-10  Score=106.76  Aligned_cols=169  Identities=12%  Similarity=0.091  Sum_probs=124.3

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchh-HHHHHHHHHHH
Q 019064           20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFA-TCLVFGTLEVL   94 (346)
Q Consensus        20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~-~i~~~~~l~~~   94 (346)
                      ++...+.+.+.+.-....++.|+++ .|++..+.+.+......  ++..++.|+++||+    +|||| .+.++.++..+
T Consensus         4 ~~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l   80 (402)
T PRK11902          4 MLLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA   80 (402)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence            3455666677777777889999986 59999999988654443  68899999999996    27876 56666777766


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ++.++.+.   +.             ..+.+.+++..++.++..+...+...++..|.+++++      |.+...+...+
T Consensus        81 ~~~~l~~~---~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g  138 (402)
T PRK11902         81 SIAAMAFC---PP-------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLG  138 (402)
T ss_pred             HHHHHHhc---Cc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHH
Confidence            66655443   11             1245556666566778888899999999999987543      56666777777


Q ss_pred             HHHHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      .++|.++++.+..++.+. .||+..|.+.++..++..+..
T Consensus       139 ~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~  178 (402)
T PRK11902        139 YRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT  178 (402)
T ss_pred             HHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence            888999988888888775 599999998777665554443

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.22  E-value=3.7e-10  Score=109.02  Aligned_cols=170  Identities=11%  Similarity=0.009  Sum_probs=121.9

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHcccccCCchh---HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           20 VFVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      ++...++..+...++...++.|+.+..+....   ..+.+.........++.++.|+++||+ ||++++..+..+..++.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~  302 (408)
T PRK09874        224 LFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLL  302 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHH
Confidence            33334445555556667778888764433221   223444455566677888899999995 99999988887776665


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +.+....                   +.+.+++..++.+++.+...+...+...+..+++.      +++.+++++...+
T Consensus       303 ~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~  357 (408)
T PRK09874        303 IPMSFVQ-------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRD  357 (408)
T ss_pred             HHHHHhc-------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHH
Confidence            5443321                   24556677778899999988888888877766443      5677888888899


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +|..+++.+.+++.++.||+..|.+.+++.+++.+....
T Consensus       358 ~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~  396 (408)
T PRK09874        358 IGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN  396 (408)
T ss_pred             HHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999888877776665544

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.22  E-value=1.1e-09  Score=109.21  Aligned_cols=178  Identities=10%  Similarity=0.129  Sum_probs=133.1

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc----ccchhH-HHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY----LSRFAT-CLV   87 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~----lGR~~~-i~~   87 (346)
                      .+|..+.++...+..-+.++.....++.|+++ .|.+..+.+....  .+..++..++.|.++||+    +||||. +.+
T Consensus        10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~--~~~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~   86 (491)
T PRK11010         10 QQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL--VGQAYVFKFLWSPLMDRYTPPFLGRRRGWLLA   86 (491)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHcccccCCCCchHHHHH
Confidence            45567777788888888888888889999875 5888888777522  333457889999999994    299886 556


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      +.+...++...+....  |              ..+.+.+.+...+.+++.+...+...++..|.+++++      |.+.
T Consensus        87 ~~i~~~~~~~~~a~~~--~--------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~  144 (491)
T PRK11010         87 TQLLLLVAIAAMGFLE--P--------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAG  144 (491)
T ss_pred             HHHHHHHHHHHHHHcC--C--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHH
Confidence            6665656655554432  2              2256677778888899999999999999999998443      5667


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhh-ccchhHHHHHHHHHHHHHHHHHHh
Q 019064          168 FNFYLFATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       168 f~~~y~~~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      .++...+.++|.++++.+..++.+ ..||+..|.+.++..++..+..+.
T Consensus       145 ~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~  193 (491)
T PRK11010        145 AAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL  193 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence            777778889999999988888888 479999999887766655544333

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.21  E-value=1.1e-09  Score=107.71  Aligned_cols=179  Identities=13%  Similarity=-0.042  Sum_probs=125.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      |.+++..+. +.-.|.-..+.+.+..++.+ ++|++..|.+++.+++.....++.++.|++.||+ |.|+++.++.++..
T Consensus        34 r~l~~s~~~-f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~  111 (462)
T PRK15034         34 RNLWISVSC-LLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI  111 (462)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence            554444443 44455555555666667655 7999999999999999999999989999999996 99999999999988


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.+++.++.  ++.            ..+.+.+++.+++.|++ |+..+.....+.+.|++++      ++...+++..
T Consensus       112 i~~~~~~~a~--~~~------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g  170 (462)
T PRK15034        112 IPCVWLGIAV--QNP------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGG  170 (462)
T ss_pred             HHHHHHHHHH--ccc------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHH
Confidence            8877766542  111            12577888999999998 7788889999999998543      4666666656


Q ss_pred             HHHHHHHHHHhhhhhhh-----h-------------ccchhHHHHHHHHHHHHHHHHHHhc
Q 019064          174 ATTLAAMIGVTAIVYVF-----I-------------DQGWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~-----~-------------~~g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      ..|+|..++..+.+.+.     .             ..+|+.++.+-.+..+++.++.++.
T Consensus       171 ~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~  231 (462)
T PRK15034        171 LGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG  231 (462)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            67777776655554322     2             2346666555555454554444443

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.20  E-value=7.5e-11  Score=111.08  Aligned_cols=166  Identities=12%  Similarity=0.042  Sum_probs=140.3

Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064           45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA  124 (346)
Q Consensus        45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~  124 (346)
                      .++.++.+.+.+...+.....+..++.|.+.|| +|++-.+++|.++....++++++..                   +.
T Consensus       100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~-iGy~ipm~~Gl~vmf~sTilFafg~-------------------sy  159 (464)
T KOG3764|consen  100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDR-IGYKIPMVAGLFVMFLSTILFAFGN-------------------SY  159 (464)
T ss_pred             CccccccchhHHHHHHHHHHHHhcccchhhHHH-hccccHHHHHHHHHHHHHHHHHHcc-------------------hh
Confidence            456678889999999999999999999999998 5999999999999999999998864                   46


Q ss_pred             HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHH
Q 019064          125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSV  204 (346)
Q Consensus       125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~  204 (346)
                      +++++++.+.|+|.+....+-.++.||.|+++.+     |++.++...-.+.+|-++||..++.+.+..|+...|++.++
T Consensus       160 ~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~  234 (464)
T KOG3764|consen  160 PMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAI  234 (464)
T ss_pred             HHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHH
Confidence            7899999999999999999999999999998763     57777777778999999999999999999999999999998


Q ss_pred             HHHHHHHHHHhcCccceec---CCCCCcchhHHH
Q 019064          205 ATLIGLIALAIGKPFYRIQ---QPGESPLVRVAQ  235 (346)
Q Consensus       205 ~~~~~~~i~~~~~~~~~~~---~p~gs~l~~i~~  235 (346)
                      ++++...+-++..+.++.+   .+++.|+.++.+
T Consensus       235 v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~  268 (464)
T KOG3764|consen  235 VLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLM  268 (464)
T ss_pred             HHHHHHHHHHheeCccccCccccccCccHHHHHh
Confidence            8877766655554444332   356666666554

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.20  E-value=3.9e-10  Score=108.23  Aligned_cols=160  Identities=14%  Similarity=0.066  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      ...++....+..+.+.++...++.|+.+++|++..+++.+.........++.++.|+++||+ ||++.+.++..+..+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~  318 (405)
T TIGR00891       240 FVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLI  318 (405)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHH
Confidence            33444444555666667778899999989999999999999989999999999999999995 99999887776543322


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      ..+...   +               .+.+.+.+++++.++..++..+...++..|.++++.      +++.++..+...+
T Consensus       319 ~~~~~~---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~  374 (405)
T TIGR00891       319 IPVFAI---G---------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGN  374 (405)
T ss_pred             HHHHHh---C---------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHH
Confidence            221111   1               123445555566667777777788888889887543      5778888888999


Q ss_pred             HHHHHHHhhhhhhhhccc-hhHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQG-WWLGFLI  201 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g-~~~~f~i  201 (346)
                      +|+.+++.+.+++.++.| |...+..
T Consensus       375 ~g~~~g~~~~g~l~~~~g~~~~~~~~  400 (405)
T TIGR00891       375 LGGALAPIIGALLAQRLDEYGTALAS  400 (405)
T ss_pred             HHHHHHHHHHHHHHHhccccchhHHh
Confidence            999999999999999888 7766654

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.20  E-value=3.3e-10  Score=107.89  Aligned_cols=167  Identities=13%  Similarity=0.082  Sum_probs=123.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +..+.+....++....++.+...++.|+++++|.+..+++...........++.+++|+++||+ |||+.+..+..+..+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~  297 (394)
T TIGR00883       219 KPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAAL  297 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHH
Confidence            3467777788888999999999999999888999999999888888889999999999999996 999987755554433


Q ss_pred             HH-HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH-H
Q 019064           95 SL-VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY-L  172 (346)
Q Consensus        95 G~-~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~-y  172 (346)
                      .. .++....  +              ..+.+.+++...+.+++.+...+...++..|.+|++.      |.+.++.. .
T Consensus       298 ~~~~~~~~~~--~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~  355 (394)
T TIGR00883       298 LAVPLLMALL--D--------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYN  355 (394)
T ss_pred             HHHHHHHHHh--c--------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhH
Confidence            22 2222111  0              0134455666777888888888999999999998654      34444443 3


Q ss_pred             HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSV  204 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~  204 (346)
                      .+..+|..+++.+.+++.++.| |+..+...++
T Consensus       356 ~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~  388 (394)
T TIGR00883       356 LAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA  388 (394)
T ss_pred             hHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence            4556788899999999998888 7766554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK03545 putative arabinose transporter; Provisional

Probab=99.19  E-value=1.5e-09  Score=104.59  Aligned_cols=174  Identities=9%  Similarity=-0.059  Sum_probs=127.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+..+...++....+++....++.|+.+.+|++..+++.+...+.....++.++.|+++||+ ||++. ..+..+..++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~-~~~~~~~~~~~  284 (390)
T PRK03545        207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFL-LIAIALLLVCL  284 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHH-HHHHHHHHHHH
Confidence            34445555666667777777888899888999999999999889889999999999999996 88764 44444444443


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      .++....                  .+.+.+++...+.+++.++..+...+.+.+..++ .      +++.++++....+
T Consensus       285 ~~l~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~~~  339 (390)
T PRK03545        285 LLLLPAA------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A------TDVAMALFSGIFN  339 (390)
T ss_pred             HHHHHHh------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c------HHHHHHHHHHHHH
Confidence            3322211                  1345566667778888777777777777666542 1      4566777777789


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      +|..+|+.+.+++.++.|++..|.+.+++.++++++.....
T Consensus       340 ~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  380 (390)
T PRK03545        340 IGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF  380 (390)
T ss_pred             HHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999988887777777665443

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.19  E-value=5.3e-10  Score=111.11  Aligned_cols=150  Identities=18%  Similarity=0.142  Sum_probs=109.6

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      ++...++.|+++++|++..+++.+...+.....++.+++|+++||+ ||++++.++..+..++.+++....         
T Consensus       293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~---------  362 (496)
T PRK03893        293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIG---------  362 (496)
T ss_pred             hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhcc---------
Confidence            4667899999889999999999999999999999999999999995 999998877666555543332211         


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~  192 (346)
                              ....+...+.+++.+....+..+..+++..|.++++.      +.+.+++++...++|+.+++.+.+++.+.
T Consensus       363 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~  428 (496)
T PRK03893        363 --------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR  428 (496)
T ss_pred             --------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence                    1122333333333333333445667777888887432      67788888888999999999999999999


Q ss_pred             cchhHHHHHHHHHH
Q 019064          193 QGWWLGFLISSVAT  206 (346)
Q Consensus       193 ~g~~~~f~i~~~~~  206 (346)
                      .||...+.+.+++.
T Consensus       429 ~g~~~~~~~~~~~~  442 (496)
T PRK03893        429 LDLGTALASLSFSL  442 (496)
T ss_pred             CChHHHHHHHHHHH
Confidence            99988775544433

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.19  E-value=8.1e-10  Score=108.37  Aligned_cols=177  Identities=17%  Similarity=0.075  Sum_probs=116.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--hhHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR--FATCLVFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR--~~~i~~~~~l~   92 (346)
                      +.+|.+.+..++..+.++++..+++.|+++++|++..+++.....+.....++.+++|+++||+.+|  ++......+..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~  322 (434)
T PRK11663        243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI  322 (434)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence            3456666667777778888889999999888999999999999999999999999999999996432  23222221111


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .+..+.+.+.   +..              +.....+..++++++..+.........+|.++++.      +....++.+
T Consensus       323 ~~~~~~~~~~---~~~--------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~  379 (434)
T PRK11663        323 LLSVGSLWLM---PFA--------------SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG  379 (434)
T ss_pred             HHHHHHHHHc---ccc--------------cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence            1222221111   210              11222222233333322222223344567665322      678888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ...++|..+++.+.+++.+..||...|.+.+++.+++.++.+
T Consensus       380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~  421 (434)
T PRK11663        380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL  421 (434)
T ss_pred             HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999888777666655444

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.19  E-value=1e-09  Score=105.54  Aligned_cols=157  Identities=13%  Similarity=0.112  Sum_probs=116.1

Q ss_pred             HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064           25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY  104 (346)
Q Consensus        25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~  104 (346)
                      +...+.+......++.|+++ .|.+..+++...........++.++.|+++||+ ||++.+.++..+..++..++. .. 
T Consensus       210 ~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~~-  285 (381)
T PRK03633        210 IISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-SQ-  285 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-hh-
Confidence            33344455555678888875 699988888888888888899999999999996 999998888877777654432 10 


Q ss_pred             cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064          105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT  184 (346)
Q Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~  184 (346)
                                          ......+.+.+++.++..|...+...|..++++      +......+....++|.++++.
T Consensus       286 --------------------~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~  339 (381)
T PRK03633        286 --------------------AAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPS  339 (381)
T ss_pred             --------------------HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence                                112344556666666778888888888876432      344555556678999999999


Q ss_pred             hhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          185 AIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       185 ~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      +.+++.+++||.+.|.+.+.+.+++.+
T Consensus       340 ~~G~l~~~~g~~~~f~~~~~~~l~~~~  366 (381)
T PRK03633        340 FTAMLMQNYSDNLLFIMIASVSFIYLL  366 (381)
T ss_pred             HHHHHHHHhCccHHHHHHHHHHHHHHH
Confidence            999999999999999887766655443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.19  E-value=1.1e-09  Score=106.02  Aligned_cols=166  Identities=13%  Similarity=-0.054  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064           19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM   98 (346)
Q Consensus        19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l   98 (346)
                      .+....++.-..++.+..+++.|+.+ .|++..+++.+...+.....++.++.|+++||+ ||++.+.++.....++..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~  301 (406)
T PRK11551        224 LLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAA  301 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence            33444455556777777888888875 799999999999999999999999999999995 9999888766655555444


Q ss_pred             HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHH
Q 019064           99 LTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLA  178 (346)
Q Consensus        99 l~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG  178 (346)
                      +...   +                +.+.+.+..++.+++.++..+...++..|.+++++      +++..++.+...++|
T Consensus       302 ~~~~---~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g  356 (406)
T PRK11551        302 LAAA---P----------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLG  356 (406)
T ss_pred             HHhc---C----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHH
Confidence            3322   1                23344555666777777788888888999998654      677888888889999


Q ss_pred             HHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHH
Q 019064          179 AMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLI  211 (346)
Q Consensus       179 ~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~  211 (346)
                      ..+++.+.+++.++. +|...+.+...+.+++.+
T Consensus       357 ~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~  390 (406)
T PRK11551        357 SMAGPLLAGQLLALGRSTVGVIGASIPVILVAAL  390 (406)
T ss_pred             HHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHH
Confidence            999999999988764 444455544444444433

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.18  E-value=6.7e-10  Score=115.20  Aligned_cols=129  Identities=16%  Similarity=0.050  Sum_probs=97.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019064           59 NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC  138 (346)
Q Consensus        59 ~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~  138 (346)
                      +......++.+++|+++||+ |||+++.++.++..++.+++.+..                   +...+++.+++.+++.
T Consensus       603 l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~-------------------s~~~ll~~~~l~g~~~  662 (742)
T TIGR01299       603 LGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGN-------------------SESAMIALLCLFGGLS  662 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHc-------------------cHHHHHHHHHHHHHHH
Confidence            34567788999999999995 999999998888888776665432                   1233444555667777


Q ss_pred             cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ++..+...++.+|.+|.+.      |++.+++.+...++|+++++.+++++.+. +....|.+.+++++++.++.+
T Consensus       663 ~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~  731 (742)
T TIGR01299       663 IAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL  731 (742)
T ss_pred             HHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence            7788889999999998532      78899999999999999999998877663 456677777776666555444

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.18  E-value=1.6e-09  Score=102.68  Aligned_cols=136  Identities=15%  Similarity=0.109  Sum_probs=114.2

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      .....|.+.+++.++++..+++++-.+|.+...+.++..|++.+|+ |+|+.++++..++.+|..++.-++.        
T Consensus        30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~--------  100 (422)
T COG0738          30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAAS--------  100 (422)
T ss_pred             hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhh--------
Confidence            3456688888999999999999999999999999999999999996 9999999999999999888875542        


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~  191 (346)
                              ......|.+++++++.|.+..+....+++.+..+++...      .-.|...-...+|++++|.+++++..
T Consensus       101 --------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~------~rlnl~q~fn~lGa~~gp~~g~~lil  165 (422)
T COG0738         101 --------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAA------FRLNLAQAFNGLGAILGPLLGSSLIL  165 (422)
T ss_pred             --------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHH------HHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence                    235788999999999999999999999999999875432      22344444568899999988877654

>PRK12382 putative transporter; Provisional

Probab=99.18  E-value=7e-10  Score=106.93  Aligned_cols=162  Identities=20%  Similarity=0.253  Sum_probs=123.0

Q ss_pred             HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064           25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY  104 (346)
Q Consensus        25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~  104 (346)
                      ++..+++.++....+.|+++ .|++.  ++.....+.....++.++.|++.||+ ||+|.+.++..+..++.+++...  
T Consensus       226 ~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~--  299 (392)
T PRK12382        226 ALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA--  299 (392)
T ss_pred             HHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc--
Confidence            34456666677777888865 46653  44555566667778889999999995 99999998888888876655432  


Q ss_pred             cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064          105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT  184 (346)
Q Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~  184 (346)
                       +                +.+..++...+.+++.+...+...+...|.++++.      +.+.+++++...++|..+++.
T Consensus       300 -~----------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~~  356 (392)
T PRK12382        300 -P----------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSGP  356 (392)
T ss_pred             -c----------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence             1                23455667778888888888888788888876432      678888889899999999999


Q ss_pred             hhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          185 AIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       185 ~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+++.++.||+..|.+.+++.+++.++.+.
T Consensus       357 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  387 (392)
T PRK12382        357 LAGMLATSFGYPSVFLAGAISAVLGIIVTIL  387 (392)
T ss_pred             HHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999888877777666553

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.18  E-value=1.7e-09  Score=102.93  Aligned_cols=130  Identities=17%  Similarity=0.225  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccc
Q 019064           65 FLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGT  144 (346)
Q Consensus        65 ~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~  144 (346)
                      .++.++.|+++||+ |||+++.++.++..++.+++.+....+..           .......+++++++.|+|.+...+.
T Consensus        49 ~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~r~l~G~~~~~~~~~  116 (394)
T TIGR00883        49 PLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI-----------GIWAPILLLLARLIQGFSLGGEWGG  116 (394)
T ss_pred             hhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-----------HHHHHHHHHHHHHHHHhhccccccc
Confidence            35788999999996 99999999999999888777664211100           0012245778899999999999999


Q ss_pred             hhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh--------hccchhHHHHHHHHHHHHHHHH
Q 019064          145 LPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF--------IDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       145 ~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~--------~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      ..++.+|.+++++      |+....+...+..+|.++++.+...+.        +.++|++.|.+.++..+++..+
T Consensus       117 ~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~  186 (394)
T TIGR00883       117 AALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL  186 (394)
T ss_pred             cHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence            9999999998654      567777778888889888887765543        3578999998877666555444

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.17  E-value=1.4e-09  Score=103.29  Aligned_cols=180  Identities=16%  Similarity=0.058  Sum_probs=128.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH-HHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT-CLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~-i~~~~~l~~   93 (346)
                      |..+.+++..++....++++..+++.|+++.+|.+..+++.+.........++.+++|+++||+ |||+. +........
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~  293 (399)
T TIGR00893       215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI  293 (399)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence            5677788888889999999999999999999999999999999888889999999999999996 88751 222222222


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.++..+.......            . ......+...+++.+..+..+...++.+|.+++++      ++..++++..
T Consensus       294 ~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~  354 (399)
T TIGR00893       294 IAGLVLSLLMFATNY------------V-NIPYAALALVALGFFGLGAGAIGWALISDNAPGNI------AGLTGGLINS  354 (399)
T ss_pred             HHHHHHHHHHHHhcc------------c-hhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhH------HHHHHHHHHH
Confidence            221111111100100            0 11222333334444444478899999999998544      6788888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++|..+++.+.+++.+..| |...|.+.++..+++.++.+
T Consensus       355 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  396 (399)
T TIGR00893       355 LGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL  396 (399)
T ss_pred             HHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999888 99898887776666655443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.17  E-value=6.4e-10  Score=108.74  Aligned_cols=175  Identities=12%  Similarity=0.018  Sum_probs=128.4

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCch--------hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDI--------AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~--------~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +..++..++...++......++.|+++ .|.+.        ...+...+...+...++.++.|+++||+ |||+++.++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~  288 (418)
T TIGR00889       211 AIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSL  288 (418)
T ss_pred             eeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHH
Confidence            345555566555555555677778764 45443        4557777777888888889999999996 9999999999


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ++..++..++....  +.             ....+.+++...+.+++.+...++...+++|.+++++      +.+.++
T Consensus       289 ~~~~v~~~l~~~~~--~~-------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g  347 (418)
T TIGR00889       289 VAWALRFGFFAYGD--PE-------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQG  347 (418)
T ss_pred             HHHHHHHHHHHHcC--cc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHH
Confidence            98888766665431  10             1124556777888999988888998999999998433      678888


Q ss_pred             HHH-HHHHHHHHHHHhhhhhhhhc------cchhHHHHHHHHHHHHHHHHHHh
Q 019064          170 FYL-FATTLAAMIGVTAIVYVFID------QGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       170 ~~y-~~~niG~~i~~~~~~~i~~~------~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+ ...++|.++++.+.+++.++      +||+..|.+.+++.+++.+++..
T Consensus       348 ~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~  400 (418)
T TIGR00889       348 LFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMI  400 (418)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence            886 46789999999999999887      46999998877766555554443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.17  E-value=1.1e-09  Score=106.56  Aligned_cols=159  Identities=11%  Similarity=-0.063  Sum_probs=122.9

Q ss_pred             HHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 019064           31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHP  110 (346)
Q Consensus        31 ~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~  110 (346)
                      +.++...++.|+++.+|.+...++.+...+.....++.+++|+++|+. ++++.+..+..+..++.+++...   +    
T Consensus       239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~---~----  310 (417)
T PRK10489        239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM---P----  310 (417)
T ss_pred             HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc---c----
Confidence            456677888999888999999999998888888999999999999984 77778887777777776555432   1    


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064          111 PDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF  190 (346)
Q Consensus       111 ~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~  190 (346)
                                  +.....+..++.+++.+...+...++..|..|++.      +++.+++++...++|..+++.+.+++.
T Consensus       311 ------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~  372 (417)
T PRK10489        311 ------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG  372 (417)
T ss_pred             ------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence                        23455666777888887777777788888887432      677888888888999999999999999


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHHh
Q 019064          191 IDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       191 ~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+|+...+.+.+++.++..++...
T Consensus       373 ~~~g~~~~~~~~~~~~~~~~~~~~~  397 (417)
T PRK10489        373 AMMTPVASASASGFGLLIIGVLLLL  397 (417)
T ss_pred             HHhchhhHHHHHHHHHHHHHHHHHH
Confidence            9999888887766655544444433

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.15  E-value=2.2e-09  Score=103.41  Aligned_cols=164  Identities=9%  Similarity=-0.073  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH-HHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL-EVL   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l-~~~   94 (346)
                      ..+.+.+..++...++-...+.++.|++ ++|++..+.+.+.+.+.....+.+++.|.++||+ ||++.......+ ..+
T Consensus         5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l   82 (382)
T TIGR00902         5 PFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAI   82 (382)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence            3344555566666666556677888885 5899999999999999999999999999999996 885433221111 111


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ..+.+...                  ..+.+.+++.+.+.+.+.+...|...++..| ..    +   +++..++.....
T Consensus        83 ~~~~~~~~------------------~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~----~---~~~~~~g~~~~~  136 (382)
T TIGR00902        83 FAAAFSAG------------------AHNAWLLFIAIGLFALFFSAGMPIGDALANT-WQ----K---QFGLDYGKVRLI  136 (382)
T ss_pred             HHHHHHHh------------------hhhHHHHHHHHHHHHHHHccchhHHHHHHHH-HH----H---HcCCCccHHHHH
Confidence            11111111                  1246777788888888888888877776543 22    1   145567777888


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL  207 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~  207 (346)
                      .++|.++++.+++++.+++||+..|.+..+..+
T Consensus       137 ~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~  169 (382)
T TIGR00902       137 GSAAFIIGSALFGGLIGMFDEQNILAILTAGLA  169 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH
Confidence            999999999999999999999999987655433

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>TIGR00897 2A0118 polyol permease family

Probab=99.14  E-value=3.4e-09  Score=102.80  Aligned_cols=177  Identities=12%  Similarity=0.049  Sum_probs=125.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH-HHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV-FGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~-~~~l~~   93 (346)
                      |..+...+..++...++++....++.|++ ++|++..+++.+.........++.++.|+++||+ ||++.+.. +.+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~  299 (402)
T TIGR00897       222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG  299 (402)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence            34566667778888899999999999985 5899999998888888889999999999999995 98887642 222233


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++.+.+...   |...           ..+.+..++...+.+++.++..+ ..+...|..++       .++..+++++.
T Consensus       300 ~~~~~l~~~---~~~~-----------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~-------~~g~~~g~~~~  357 (402)
T TIGR00897       300 IFTLALYYI---PQHF-----------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPK-------HKGAAMSVLNL  357 (402)
T ss_pred             HHHHHHHHH---HHcc-----------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcc-------hhHHHHHHHHH
Confidence            332222221   1100           11344455566677777776544 34445554332       16788889999


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ..++|..++|.+.+++.+..||...|.+.+++.+++.++.++
T Consensus       358 ~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~  399 (402)
T TIGR00897       358 SAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF  399 (402)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999899999998888777666555443

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.14  E-value=2.9e-10  Score=91.95  Aligned_cols=130  Identities=18%  Similarity=0.213  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc
Q 019064           59 NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC  138 (346)
Q Consensus        59 ~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~  138 (346)
                      .+.....++.++.|+++||+ |||+++..+..+..++.+++....                   +.+.+.+...+.+++.
T Consensus         6 ~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~   65 (141)
T TIGR00880         6 GYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS-------------------NITVLIIARFLQGFGA   65 (141)
T ss_pred             eehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc-------------------cHHHHHHHHHHHHHHH
Confidence            34566777889999999996 999999988888888766655431                   3456777788899999


Q ss_pred             cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +...+...++..|.+++++      +....+..+...++|..+++.+.+++.+..+|+..|.+..+..+++.+...
T Consensus        66 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (141)
T TIGR00880        66 AFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLA  135 (141)
T ss_pred             HHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999998654      577788888889999999999999998888999998887766655555443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.14  E-value=3.9e-09  Score=100.47  Aligned_cols=186  Identities=13%  Similarity=-0.002  Sum_probs=144.5

Q ss_pred             ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 019064            8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV   87 (346)
Q Consensus         8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~   87 (346)
                      +.|++++|..+.-... +...|.-+.+.+.+..++.+++|+|..|.++++..-.....+.-++-|.+.||+ |-|++..+
T Consensus         7 ~~k~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~   84 (417)
T COG2223           7 RGKRIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTIL   84 (417)
T ss_pred             ccccchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHH
Confidence            3456677777766554 344566667778888999999999999999999999999999999999999996 87777777


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      +.++..+-.+.+.++...|                +.+.+++.-.++|++ |+..+...++....||+++      .+..
T Consensus        85 s~~l~~IP~~~~~~a~~~~----------------~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~A  141 (417)
T COG2223          85 SMLLLLIPCLGLAFAVTYP----------------STWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGLA  141 (417)
T ss_pred             HHHHHHHHHHHHHHHccCC----------------chHHHHHHHHHHhcc-cceehcccccccccCChhh------hhHH
Confidence            8888888777777764222                235566666667776 4566778888999999654      3455


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhhhccc---hhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064          168 FNFYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLIGLIALAIGKPF  219 (346)
Q Consensus       168 f~~~y~~~niG~~i~~~~~~~i~~~~g---~~~~f~i~~~~~~~~~~i~~~~~~~  219 (346)
                      ...+- ..|+|..+...+.+.+....|   |+..-.+..+.++++.+.+++..+.
T Consensus       142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d  195 (417)
T COG2223         142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMND  195 (417)
T ss_pred             HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            55555 899999999999999998888   8988888888888877777776554

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.13  E-value=1.5e-09  Score=107.26  Aligned_cols=176  Identities=16%  Similarity=0.054  Sum_probs=129.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY-LSRFATCLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~-lGR~~~i~~~~~l~~   93 (346)
                      +..+..++..++..+++++....++.|+++ +|++..+++.+.+.......++.+++|+++|+. .++++...++..+..
T Consensus       241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~  319 (455)
T TIGR00892       241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF  319 (455)
T ss_pred             chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence            345666667777888888888899999875 799999999999988888888999999999984 233433333332322


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      .+..++....                 ..+.+.+++...+.+++.+...++..+...|.++++.      +.+.++.+..
T Consensus       320 ~~l~~ll~~~-----------------~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~~  376 (455)
T TIGR00892       320 NGLTHLLCAL-----------------AGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVTI  376 (455)
T ss_pred             HHHHHHHHHH-----------------hchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHHH
Confidence            2322222111                 0134566777888999999999999999999887433      5677888888


Q ss_pred             HHHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++|.++++.+.+++.+.. +|+..|.+.+++.+++.+..+
T Consensus       377 ~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~  418 (455)
T TIGR00892       377 VECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA  418 (455)
T ss_pred             HHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence            99999999999999998877 599999888877666655433

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.13  E-value=4.2e-09  Score=101.43  Aligned_cols=171  Identities=9%  Similarity=-0.047  Sum_probs=134.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .|..+..++..++-..++.+...+.++|+++ +|.+..+++...........+..++.+++.||+ |+++.+.++.++..
T Consensus       204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~  281 (382)
T TIGR00902       204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACV  281 (382)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHH
Confidence            3556777777888888888888999999975 899999999988887778888888999999996 99999999999998


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-  172 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-  172 (346)
                      ++..++....                   +.+.+++...+.++..|...+....++.++ ++++      +......+. 
T Consensus       282 ~~~~~~~~~~-------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~  335 (382)
T TIGR00902       282 GRWAIIGAIE-------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNA  335 (382)
T ss_pred             HHHHHHHhHh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHH
Confidence            8877665432                   456677788899999999999999999876 6433      344444443 


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      .+..+|..+++.+++++.+++|+ ..|.+.++..++++++.
T Consensus       336 ~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~  375 (382)
T TIGR00902       336 LAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI  375 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence            35679999999999999999986 56777666666555443

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.12  E-value=6.3e-10  Score=108.46  Aligned_cols=168  Identities=12%  Similarity=-0.029  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHccccc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064           21 FVLSALENMGFIANGISMVLYFKNEM---HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV   97 (346)
Q Consensus        21 ~~~~~~e~~a~ygv~~~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~   97 (346)
                      ++..++....+......++.|+.+.+   +.+..+.+.+.+.......++.+++|+++||+ ||++.+.++.++..++..
T Consensus       229 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~  307 (420)
T PRK09528        229 VLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRII  307 (420)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHH
Confidence            33334444445445556777776543   55666677878877777888999999999996 999999988888888776


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH-HHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-YLFATT  176 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~-~y~~~n  176 (346)
                      ++.+..                   +.+.+++...+.+++.+...+....++.|.++++.      +...+.. +....+
T Consensus       308 l~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~  362 (420)
T PRK09528        308 GSGFAT-------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQ  362 (420)
T ss_pred             HHHhcc-------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHH
Confidence            665432                   24456666777888887777777788888887543      2333333 455688


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +|.++++.+.+++.+..||+..|.+.+++.++..++.+
T Consensus       363 lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~  400 (420)
T PRK09528        363 LGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV  400 (420)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999887766555544433

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=99.11  E-value=6.7e-10  Score=109.64  Aligned_cols=146  Identities=16%  Similarity=0.200  Sum_probs=127.9

Q ss_pred             ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhH
Q 019064           45 EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIA  124 (346)
Q Consensus        45 ~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~  124 (346)
                      +++++..+-+.+.+.+..++.++++.+|+++||+ |-|+++.++.++..+++++..+++.                 ...
T Consensus        67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-----------------~~~  128 (466)
T KOG2532|consen   67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-----------------IGF  128 (466)
T ss_pred             eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-----------------hcc
Confidence            5788999999999999999999999999999997 9999999999999999999888763                 233


Q ss_pred             HHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHHH
Q 019064          125 AYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISS  203 (346)
Q Consensus       125 ~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-~g~~~~f~i~~  203 (346)
                      +.+++.+++.|++.|...|++..+.+...|.   +|   |+.+....+....+|.+++..+++++-+. .||+..|.+.+
T Consensus       129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~---~E---rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g  202 (466)
T KOG2532|consen  129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPP---NE---RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG  202 (466)
T ss_pred             hhhHHHHHHhHHHHhHHHhhhhceeeeECCH---HH---HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence            4678999999999999999999999999994   33   68888888888899999999999999888 99999999888


Q ss_pred             HHHHHHHHHHH
Q 019064          204 VATLIGLIALA  214 (346)
Q Consensus       204 ~~~~~~~~i~~  214 (346)
                      ++.++..+++.
T Consensus       203 ~~g~i~~~~w~  213 (466)
T KOG2532|consen  203 IVGLIWFILWF  213 (466)
T ss_pred             HHHHHHHHHHH
Confidence            76666555544

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.11  E-value=3.9e-09  Score=105.34  Aligned_cols=179  Identities=16%  Similarity=0.173  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLT-NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~-~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      .|.+++..++-.++.++.....+.|+.+++|++..+.+.+.. .......++.+++|+++||+ ||++.+.++.++..++
T Consensus       224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~  302 (491)
T PRK11010        224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS  302 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence            344555556666777777778888988889999999998875 44568888999999999996 9998887766655554


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      .+++.+.+..+               .+...+.+...+..+..|...+...++..+..+++-+      ...+...+...
T Consensus       303 ~l~~~~l~~~~---------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~------~t~~gl~~s~~  361 (491)
T PRK11010        303 NAGYWLLSITD---------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFS------ATQFALLSALS  361 (491)
T ss_pred             HHHHHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc------HHHHHHHHHHH
Confidence            43333222100               1223333344443333333334445555566554432      34466777778


Q ss_pred             HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064          176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      ++|..+++.+.+++.+..||...|.+.+++.+++++.....+
T Consensus       362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~  403 (491)
T PRK11010        362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR  403 (491)
T ss_pred             HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence            999888888899999999999999988887777766665444

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.11  E-value=6.5e-09  Score=99.48  Aligned_cols=183  Identities=17%  Similarity=0.107  Sum_probs=141.4

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      +++.++..++..++...+.|...+++-+|+++..|++....+.+...|.+...++.+++|.++||  +.++++.....+.
T Consensus       209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~  286 (394)
T COG2814         209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLL  286 (394)
T ss_pred             cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHH
Confidence            45678888999999999999999999999999999999999999999999999999999999998  8888888887777


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .+.+..+.+..                  .+.+...+.+++.++..+..-.....-.++..| ++      .+...+.+.
T Consensus       287 a~~~l~l~~~~------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~------~~~a~sl~~  341 (394)
T COG2814         287 ALALLALTFTG------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAP-DA------ADLAGSLNV  341 (394)
T ss_pred             HHHHHHHHHhc------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCC-Cc------hHHHHHHHH
Confidence            77666666543                  133455555555666655554444444555222 22      345555666


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcccee
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRI  222 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~  222 (346)
                      -+.|+|..+|..+++.+.+++|+.....+.++..++++++.+...+.+++
T Consensus       342 aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~  391 (394)
T COG2814         342 AAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR  391 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            67888888888888999999999999999998888888877766655443

>PRK09669 putative symporter YagG; Provisional

Probab=99.10  E-value=2.6e-09  Score=105.07  Aligned_cols=173  Identities=9%  Similarity=0.076  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhH-HHHHHHHHHHHHH
Q 019064           22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFAT-CLVFGTLEVLSLV   97 (346)
Q Consensus        22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~-i~~~~~l~~~G~~   97 (346)
                      +..+..++.+..+..++..|+++.+|++...++.+..+......+..|+.|+++||.   +||||. ++.+.+...+..+
T Consensus        16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~   95 (444)
T PRK09669         16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCL   95 (444)
T ss_pred             chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHH
Confidence            445777877888888999999999999999999999999999999999999999993   487554 5556666666654


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++..   .|....          ......+++...+..++.........++.+|..++  ++|   |.+..+|.....++
T Consensus        96 l~f~---~p~~~~----------~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~--~~e---R~~l~~~r~~~~~~  157 (444)
T PRK09669         96 LTFY---TPDFGA----------TGKIIYACVTYILLSLVYTAINVPYCAMPGAITND--PRE---RHSLQSWRFALSFI  157 (444)
T ss_pred             HHHh---CCCCCc----------chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCC--HHH---HHHHHHHHHHHHHH
Confidence            4432   243211          22445555555566666667777888888887754  333   56677777777888


Q ss_pred             HHHHHHhhhhhhhh-------ccchhHHHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       178 G~~i~~~~~~~i~~-------~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      |..+++.+...+..       ..||+..+.+.+++.++..++
T Consensus       158 G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~  199 (444)
T PRK09669        158 GGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC  199 (444)
T ss_pred             HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence            87777654332221       246777776666555444443

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.10  E-value=4.3e-09  Score=101.34  Aligned_cols=157  Identities=11%  Similarity=-0.065  Sum_probs=111.5

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch----hHHHHHHHHHHHHHHHH
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF----ATCLVFGTLEVLSLVML   99 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~----~~i~~~~~l~~~G~~ll   99 (346)
                      .++-.+++..+.+.++.|++ ++|.+..+.+.+.+++.....++.+++|.++||+ ||+    +.+.+...+..   ..+
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~~   87 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VAF   87 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HHH
Confidence            44444556666678888996 5799999999999999999999999999999996 984    33222221111   111


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAA  179 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~  179 (346)
                      ...                  ..+.+.+++.+.+.+++.+...|...+...|..++        +...++......++|.
T Consensus        88 ~~~------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~--------~~~a~~~~~~~~~lg~  141 (382)
T PRK11128         88 WFG------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQ--------IGLDYGKVRLWGSIAF  141 (382)
T ss_pred             HHh------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhh--------ccCCcchHHHHHHHHH
Confidence            111                  12467777888889999988888877777665221        2333445556678999


Q ss_pred             HHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          180 MIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       180 ~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      ++++.+++++.+++||+..|.+.++..++..+
T Consensus       142 ~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~  173 (382)
T PRK11128        142 VIGSALTGKLVSWFGEQAILWILTAGVASMLL  173 (382)
T ss_pred             HHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence            99999999999999999999877655444433

>PRK15075 citrate-proton symporter; Provisional

Probab=99.09  E-value=4.2e-09  Score=103.23  Aligned_cols=152  Identities=15%  Similarity=0.136  Sum_probs=104.1

Q ss_pred             HHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH-HHHHH
Q 019064           21 FVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL-SLVML   99 (346)
Q Consensus        21 ~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~-G~~ll   99 (346)
                      +...++....++++..+++.|+++.+|++..+++.....+.....++.+++|+++||+ |||+.+..+..+..+ +...+
T Consensus       244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~  322 (434)
T PRK15075        244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL  322 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence            4445556778888999999999988999988888877777888889999999999996 999988776544332 21111


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH-HH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT-LA  178 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n-iG  178 (346)
                      ....  +.              .......+..++.+++.+...+...++..|.+|++.      |+..+++.+...+ ++
T Consensus       323 ~~~~--~~--------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~  380 (434)
T PRK15075        323 SWLV--AA--------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIF  380 (434)
T ss_pred             HHHH--cC--------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHH
Confidence            1111  10              012223333445566666666667788889998654      4556666544444 35


Q ss_pred             HHHHHhhhhhhhhccch
Q 019064          179 AMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       179 ~~i~~~~~~~i~~~~g~  195 (346)
                      +.+++.+.+++.++.|+
T Consensus       381 g~~~p~~~g~i~~~~g~  397 (434)
T PRK15075        381 GGFTPAISTWLIHVTGD  397 (434)
T ss_pred             hhhHHHHHHHHHHhcCC
Confidence            67789999999888775

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.09  E-value=3.6e-09  Score=103.25  Aligned_cols=182  Identities=14%  Similarity=-0.041  Sum_probs=117.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      ..+..++..+.....+..+....+ ++.+++|++..+++...........++.+++|+++||+ |||+.+.++.++..++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~  362 (481)
T TIGR00879       285 LFLGVVLQWFQQFTGINAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAIC  362 (481)
T ss_pred             HHHHHHHHHHHHHhCCeehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHH
Confidence            333444444444443434444444 44456899988888888888888999999999999995 9999999888887777


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhc-cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGC-GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~-g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      .+++.+... +...+        ..............+...+. .+..+....+..|.++++.      ++......+..
T Consensus       363 ~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~  427 (481)
T TIGR00879       363 LFVLGILGA-SFVTG--------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAA  427 (481)
T ss_pred             HHHHHHHhh-cccCC--------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHH
Confidence            666654321 11000        00000122222222222222 2344666777789988543      56777788888


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .++|+++++.+.+++.++.+|...|.+.+++.+++.++..
T Consensus       428 ~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~  467 (481)
T TIGR00879       428 NWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY  467 (481)
T ss_pred             HHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence            9999999999999999888999988877766665555444

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>TIGR00788 fbt folate/biopterin transporter

Probab=99.09  E-value=4.6e-09  Score=104.24  Aligned_cols=176  Identities=14%  Similarity=0.056  Sum_probs=129.2

Q ss_pred             chHH-HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----chhHHHH
Q 019064           14 FRAC-TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RFATCLV   87 (346)
Q Consensus        14 ~~~~-~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lG-----R~~~i~~   87 (346)
                      ++.. ..+....+++.+. +.+...+..++++++|++.++.+...+.......+-++ .|.++|++ +     ||+.+++
T Consensus        24 ~~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~  100 (468)
T TIGR00788        24 PRVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVL  100 (468)
T ss_pred             cchHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHH
Confidence            4444 4444578888888 77778888999999999999998887777766666665 99999997 6     7777777


Q ss_pred             HHHHHH-HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           88 FGTLEV-LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        88 ~~~l~~-~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      +.++.. ++..  .+ +. +              ........+.+++.+++.+......-++..|+.+ ++++   ....
T Consensus       101 ~~~l~~~~~~~--~l-~~-~--------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~  158 (468)
T TIGR00788       101 SGLLGSAILYG--LL-PG-K--------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPS  158 (468)
T ss_pred             HHHHHHHHHHH--hc-cc-c--------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCC
Confidence            766552 2221  11 11 0              1122333446778999999999999999999998 3322   2455


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ..++.|.+.++|.++++.+++++.+.++|+..|.+.++..++..+...
T Consensus       159 ~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~  206 (468)
T TIGR00788       159 LVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSN  206 (468)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence            677888889999999999999999989999999888777666644333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=99.09  E-value=4.3e-09  Score=105.59  Aligned_cols=151  Identities=13%  Similarity=0.127  Sum_probs=116.9

Q ss_pred             HHhHHHHHHHccccc-----CCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064           32 IANGISMVLYFKNEM-----HFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY  104 (346)
Q Consensus        32 ygv~~~l~~yl~~~l-----g~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~  104 (346)
                      .|....+..++++..     ..+.  .+.+++.+.+...+.++.++.|.++|++ |||++++++.+++.+|.++...+. 
T Consensus        63 ~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~-  140 (513)
T KOG0254|consen   63 IGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAP-  140 (513)
T ss_pred             cccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhh-
Confidence            355566665655421     1222  2347899999999999999999999995 999999999999999999888763 


Q ss_pred             cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064          105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT  184 (346)
Q Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~  184 (346)
                                        +...+++++++.|+|.|+....++.+++|.-+.+.      |+...+.+.+..++|.+++..
T Consensus       141 ------------------~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~  196 (513)
T KOG0254|consen  141 ------------------SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYC  196 (513)
T ss_pred             ------------------hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHH
Confidence                              47889999999999999999999999999988543      677777788888899998855


Q ss_pred             hhhhhhhc-cchhHHHHHHHHHHHH
Q 019064          185 AIVYVFID-QGWWLGFLISSVATLI  208 (346)
Q Consensus       185 ~~~~i~~~-~g~~~~f~i~~~~~~~  208 (346)
                      +.....+. ++||..+.+..+..++
T Consensus       197 ~~~~~~~~~~~Wr~~~~~~~i~~~~  221 (513)
T KOG0254|consen  197 INYGTSKVYAGWRIPLGLALIPAVI  221 (513)
T ss_pred             HhhhhccCCccHHHHHHHHHHHHHH
Confidence            44444332 4899887765544333

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.08  E-value=2.4e-09  Score=105.14  Aligned_cols=176  Identities=11%  Similarity=0.036  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH-
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL-   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~-   94 (346)
                      ..|.+.+..++....++++..+++.|+++..|++..+++.....+.+...++.+++|+++||+ |+++....+..+..+ 
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~  330 (438)
T TIGR00712       252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV  330 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence            455666666777788889999999999998999999999988888889999999999999996 644322233322222 


Q ss_pred             --HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           95 --SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        95 --G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                        +..++...   +.              .+.+.....+++++++..+..........|.++++.      ++...++++
T Consensus       331 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~  387 (438)
T TIGR00712       331 TIAVIVYWMN---PA--------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG  387 (438)
T ss_pred             HHHHHHHHhc---CC--------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhc
Confidence              21111111   11              012223333344444433322222345567777433      566777777


Q ss_pred             HHHHHHH-HHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          173 FATTLAA-MIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       173 ~~~niG~-~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ...++|+ ++++.+.+++.++.||..+|.+.++..+++.+..+.
T Consensus       388 ~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~  431 (438)
T TIGR00712       388 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV  431 (438)
T ss_pred             hHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence            7777774 678999999999899999998776666556555443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.07  E-value=5.3e-09  Score=104.87  Aligned_cols=180  Identities=17%  Similarity=0.162  Sum_probs=132.3

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      +..+....+..+++...-..-++-+++ ++.-|....+.+..+...-..+..+++|.++||+ .|||.++.+-++..+..
T Consensus        12 Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~   89 (524)
T PF05977_consen   12 FRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVA   89 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHH
Confidence            334444455555554433333333333 4556677777777777778888999999999996 99999999988877766


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +++.+.....              ..+.+.+++..++.+++.+...|...+.+.|..++++      .....+......|
T Consensus        90 ~~L~~l~~~~--------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~n  149 (524)
T PF05977_consen   90 LLLAVLAFFG--------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFN  149 (524)
T ss_pred             HHHHHHHHhC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHH
Confidence            6655543221              2356778888889999999999999999999998644      5666777788899


Q ss_pred             HHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          177 LAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      +.-++||.+++.+....|-...|.+.+++.++++..+...++
T Consensus       150 iar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~  191 (524)
T PF05977_consen  150 IARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP  191 (524)
T ss_pred             HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            999999999999888888888999988877766655544443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.07  E-value=3.5e-09  Score=100.77  Aligned_cols=185  Identities=14%  Similarity=0.056  Sum_probs=138.5

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      +.+..|.+.+..+..--+|.|+...++.|+++++|.++.+++.....+.....+.-++||+||||+ |.+|+..+...+.
T Consensus       216 ~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~  294 (417)
T COG2223         216 SNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGM  294 (417)
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHH
Confidence            356789999999999999999999999999999999999999999999999999999999999996 8777777777776


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++..++.+..  +...          .+.....++.....+.+..|.-+..+..++...|+++       .+..-.+.-
T Consensus       295 ~~~~~~l~~~~--~~~~----------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vg  355 (417)
T COG2223         295 ALAAALLSLFL--TGFG----------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVG  355 (417)
T ss_pred             HHHHHHHHccc--cccc----------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHH
Confidence            66666655532  1110          0234555555566666667777777777777777642       345555556


Q ss_pred             HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064          173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      ...++|+..-|...+...+..| +..+|.+.....+++.+..+...
T Consensus       356 a~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y  401 (417)
T COG2223         356 AIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY  401 (417)
T ss_pred             HhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6678887777777787777776 88888887777777776655433

>PTZ00207 hypothetical protein; Provisional

Probab=99.05  E-value=8.4e-09  Score=104.26  Aligned_cols=170  Identities=13%  Similarity=0.008  Sum_probs=120.7

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      .++|..+...+....+....| +.. .....+.+++|++..+.+++.+...... .+.+++|+++||+ |||+++.++.+
T Consensus        24 ~~Rw~~lva~~~~~~~~g~~y-~fs-v~s~~L~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~-G~R~vllig~l   99 (591)
T PTZ00207         24 PRRFALLVLGAFCSICTSFMY-AFN-LISGAMQARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYL-GPRPIFVLSMT   99 (591)
T ss_pred             cchHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHh-CcHHHHHHHHH
Confidence            345555555555555544443 333 4445678899999999998887644443 4566789999996 99999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..+|.+++.++.  ....           ..+.+.+++.+.+.|+|.+...+.....+.+.|+++       |+...+.
T Consensus       100 l~~iG~ll~ala~--~~~i-----------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-------RG~a~Gi  159 (591)
T PTZ00207        100 VFCLGTLLFALTF--QEVI-----------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-------RGAVVAI  159 (591)
T ss_pred             HHHHHHHHHHHHh--cccc-----------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-------hHHHHHH
Confidence            9999999888752  1110           125778888999999999988888888889999731       5778888


Q ss_pred             HHHHHHHHHHH-HHhhhhhhhhccchhHHHHHHHHHH
Q 019064          171 YLFATTLAAMI-GVTAIVYVFIDQGWWLGFLISSVAT  206 (346)
Q Consensus       171 ~y~~~niG~~i-~~~~~~~i~~~~g~~~~f~i~~~~~  206 (346)
                      .....++|+++ +++...++.+  +|+..|.+.++..
T Consensus       160 ~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~  194 (591)
T PTZ00207        160 MKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFA  194 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHH
Confidence            88889999875 5555555553  4666665554443

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.05  E-value=1.1e-08  Score=100.12  Aligned_cols=170  Identities=15%  Similarity=0.048  Sum_probs=103.2

Q ss_pred             HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064           23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ  102 (346)
Q Consensus        23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~  102 (346)
                      ..++....+|++..+++.|+.+.+|++..+++...........++.+++|+++||+ |||+++.++..+..+....+...
T Consensus       251 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~  329 (432)
T PRK10406        251 FTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSA  329 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHH
Confidence            33445788999999999999988999988888877776677777888889999995 99998877665543332211111


Q ss_pred             hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH-HHHH
Q 019064          103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL-AAMI  181 (346)
Q Consensus       103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni-G~~i  181 (346)
                      .  +..             .+....+..+.+..++.+...+...++.+|.||++.      |...+++.|...++ ++..
T Consensus       330 ~--~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~  388 (432)
T PRK10406        330 L--QNV-------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGS  388 (432)
T ss_pred             H--HcC-------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhH
Confidence            1  100             011111111111222233333456677889999654      57777777765554 2334


Q ss_pred             HHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          182 GVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       182 ~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ++.+..++.....|...+.+.++..+++.+..+
T Consensus       389 ~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~~~  421 (432)
T PRK10406        389 AEYVALSLKSIGMETAFFWYVTLMAVVAFLVSL  421 (432)
T ss_pred             HHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence            667667665432355555555555555544433

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.05  E-value=1e-08  Score=101.78  Aligned_cols=185  Identities=17%  Similarity=0.125  Sum_probs=145.0

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch--hHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF--ATCLVFGT   90 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~--~~i~~~~~   90 (346)
                      +.|.+..-++..++-+-+..++......|.++++|++..+...+..+.++.+.++.+++|++.||+ |.|  ++++++.+
T Consensus       279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~  357 (477)
T PF11700_consen  279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI  357 (477)
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence            345666677778888899999999999999999999999988888889999999999999999996 988  88877776


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      ++.+-. +..+....+...          .-.+.+-+++.-++.|+..|+.++..-++.++..|++.      ...+|+.
T Consensus       358 ~~~~i~-~~g~~G~~~~~~----------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgl  420 (477)
T PF11700_consen  358 LWIIIP-LYGLFGFWPSFF----------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGL  420 (477)
T ss_pred             HHHHHH-HHHHHHhhhccc----------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHH
Confidence            663311 111111111110          01134556666668999999999999999999999754      4789999


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHh
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      |....-..+.+||.+.+.+.+..| .|.++....++++++++++..
T Consensus       421 y~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~  466 (477)
T PF11700_consen  421 YAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF  466 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999988775 888888777777777776644

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.03  E-value=5.1e-09  Score=105.49  Aligned_cols=150  Identities=15%  Similarity=0.115  Sum_probs=107.6

Q ss_pred             HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK  115 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~  115 (346)
                      .+...|+.+++|-+ ...+++...+.....+..++.|.|+|.+ |||+.++++.+++.+|.++.+-+.            
T Consensus        64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~------------  129 (599)
T PF06609_consen   64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQ------------  129 (599)
T ss_pred             HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCC------------
Confidence            45567888888886 4567888889999999999999999985 999999999999999988866432            


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064          116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~  195 (346)
                             +...++.+..+.++|.|... .....++|..+.+.      |...+.+..+..-+...+++.++..+..+.+|
T Consensus       130 -------~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~W  195 (599)
T PF06609_consen  130 -------NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGW  195 (599)
T ss_pred             -------cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCc
Confidence                   46678999999999977665 45566889998543      22222222222222222344444444445799


Q ss_pred             hHHHHHHHHHHHHHHHHH
Q 019064          196 WLGFLISSVATLIGLIAL  213 (346)
Q Consensus       196 ~~~f~i~~~~~~~~~~i~  213 (346)
                      ||.|.+.++...++++..
T Consensus       196 Rw~~~~~~i~~~i~~vl~  213 (599)
T PF06609_consen  196 RWIFYIFIIWSGIALVLI  213 (599)
T ss_pred             chHHHHHHHHHHHHHHHH
Confidence            999999888766665543

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR01272 gluP glucose/galactose transporter

Probab=99.03  E-value=9.6e-09  Score=96.48  Aligned_cols=165  Identities=12%  Similarity=0.001  Sum_probs=122.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHccc--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKN--EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+..++..+..++--.+--++..+++.|+++  .+|++..+++.....+.+...++.+++++++||+ |++|.+.++..+
T Consensus       139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l  217 (310)
T TIGR01272       139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL  217 (310)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence            3445554455555444555677889999985  3799999999999999999999999999999995 999998888877


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..++.+++...   +.                .. ...+..+++++.+.+.|+..+...+.++++..     ..+..   
T Consensus       218 ~~~~~~l~~~~---~~----------------~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~asai---  269 (310)
T TIGR01272       218 AVLLSIGAALT---HG----------------YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----QGSGI---  269 (310)
T ss_pred             HHHHHHHHHHc---CC----------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH---
Confidence            77765444332   11                11 22355688999999999999999898875421     12222   


Q ss_pred             HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL  207 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~  207 (346)
                      .....+|+++.|.+.+++.|..|.+.+|.++.++.+
T Consensus       270 ~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~~  305 (310)
T TIGR01272       270 LCLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCYL  305 (310)
T ss_pred             HHHHHhcchHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence            245778999999999999998999889886665443

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.03  E-value=2.9e-08  Score=96.15  Aligned_cols=166  Identities=12%  Similarity=-0.011  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      .++...+...+..+.+++.....+.|+.+.+|++..+.+.......+...++.++.|+++||+ ||++.+.++.++..+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g  294 (406)
T PRK15402        216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG  294 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence            345555555555666666667778888888999998888777766677888899999999996 9999999888888888


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      ..++.+....+              ....+.++++..+.++|.+...+.......+..+ ++      +++..+.+++..
T Consensus       295 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~  353 (406)
T PRK15402        295 LLLAALATVIS--------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVSAAMGMLS  353 (406)
T ss_pred             HHHHHHHHHcc--------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHHHHHHHHH
Confidence            77766542110              1234556778888999998877776665433322 21      567777778888


Q ss_pred             HHHHHHHHhhhhhhhhccchhHHHHHHH
Q 019064          176 TLAAMIGVTAIVYVFIDQGWWLGFLISS  203 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g~~~~f~i~~  203 (346)
                      ++|..+|+.+.+++.+..++.......+
T Consensus       354 ~~~~~~g~~~~~~l~~~~~~~~~~~~~~  381 (406)
T PRK15402        354 MLIFTVGIELSKHAYLGGGNGLFNLFNL  381 (406)
T ss_pred             HHHHHHHHHHHHhcccCCchHHHHHHHH
Confidence            8899999999998877767654443333

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.02  E-value=1.2e-08  Score=99.50  Aligned_cols=161  Identities=16%  Similarity=0.069  Sum_probs=119.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |..+.+++..++..++++......+.|++..++ +....+...........++.++.++++||+ ||++++.++..+..+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~  299 (437)
T TIGR00792       222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL  299 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence            456667777888888887766666666666666 445566666667788888899999999996 999999999888888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y~  173 (346)
                      +.+++.+.   +               .+.+.+++...+.++|.+...+...++.+|..+.++-+ .++..+.+++.+.+
T Consensus       300 ~~~~~~~~---~---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~  361 (437)
T TIGR00792       300 GYLIFFFA---G---------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF  361 (437)
T ss_pred             HHHHHHHc---c---------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence            77665542   1               12445566677788999988999999999987743211 11225778888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccch
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~  195 (346)
                      ..++|..+++.+.+++.+..||
T Consensus       362 ~~~~g~~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       362 VRKLGQALAGFLVGLILGIIGY  383 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999888776665

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=99.02  E-value=6.3e-09  Score=94.25  Aligned_cols=170  Identities=16%  Similarity=0.130  Sum_probs=129.8

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      ...-+.+|.+.+..++-.++.+-..+.-+.++++.+|+|...++++.+...+.+....++.|.++|++ ||+-..+.+..
T Consensus       260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~  338 (459)
T KOG4686|consen  260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASAC  338 (459)
T ss_pred             cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHH
Confidence            34456789888888888888777778888999999999999999999999999999999999999997 99877666544


Q ss_pred             -HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           91 -LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        91 -l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                       ...+|+..++++-.                     --+.++.+.|+.....-....+.++-..||+.      .+..|.
T Consensus       339 ~~tl~~H~~l~Ft~l---------------------sPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTayg  391 (459)
T KOG4686|consen  339 ILTLLGHSGLFFTFL---------------------SPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYG  391 (459)
T ss_pred             HHHHHHhhhHHhhhc---------------------cHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHH
Confidence             45567777766531                     12456666776666555556666677777543      788899


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccc---hhHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQG---WWLGFLISSVATLI  208 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g---~~~~f~i~~~~~~~  208 (346)
                      ..+...|+|-.+.+++++.|.++-|   |--.|.+....+++
T Consensus       392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL  433 (459)
T KOG4686|consen  392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMAL  433 (459)
T ss_pred             HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHH
Confidence            9999999999999999999988644   55566655554443

>PRK10504 putative transporter; Provisional

Probab=99.01  E-value=1.5e-08  Score=100.10  Aligned_cols=158  Identities=11%  Similarity=0.000  Sum_probs=117.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.....++..++..+++.......+.|++..+|.+..+++...........++.++.|+++||+ ||++++.++..+..+
T Consensus       261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~  339 (471)
T PRK10504        261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL  339 (471)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence            4556667777777888766666778888878899999999888877777777888999999996 999999988887777


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++....   .             ....+.+.+..++.++|.+...+....+..+.+++++      ++..++++.+.
T Consensus       340 ~~~~~~~~~---~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~  397 (471)
T PRK10504        340 VSLLFMLVA---L-------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMI  397 (471)
T ss_pred             HHHHHHhcc---c-------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHH
Confidence            655554321   1             1123334455666778888888888888888877543      56778888889


Q ss_pred             HHHHHHHHHhhhhhhhhccch
Q 019064          175 TTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~  195 (346)
                      .++|..+|+.+.+.+-+..|+
T Consensus       398 ~~~g~~ig~~i~g~ll~~~g~  418 (471)
T PRK10504        398 MQLSMSIGVTIAGLLLGLFGQ  418 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHhhh
Confidence            999999998888877555444

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.01  E-value=1.5e-08  Score=100.60  Aligned_cols=176  Identities=9%  Similarity=0.013  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchh-HHHHHHHHHHHHHH
Q 019064           22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFA-TCLVFGTLEVLSLV   97 (346)
Q Consensus        22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~-~i~~~~~l~~~G~~   97 (346)
                      +..+..++.+..+..+++.|+++.+|++...++.+..+....-.+..|+.|+++||   .+|||| -++++.+...+++.
T Consensus        13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~   92 (473)
T PRK10429         13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF   92 (473)
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence            45566788888888999999999999999999999999999999999999999994   149854 55566666666655


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++...   |...          +......+++...+..++.........++++|..++  ++|   |.+.+++-....++
T Consensus        93 llf~~---p~~~----------~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~--~~e---R~~l~~~~~~~~~i  154 (473)
T PRK10429         93 LLFSA---HLFE----------GTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD--KRE---REQLVPYPRFFASL  154 (473)
T ss_pred             HHHcC---CCCC----------ccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC--HHH---HHHHHHHHHHHHHH
Confidence            55421   3221          122344455555567788888888888999887754  333   56666665666777


Q ss_pred             HHHHHHhhhhhhhh-------ccchhHHHHHHHHHHHHHHHHHHh
Q 019064          178 AAMIGVTAIVYVFI-------DQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       178 G~~i~~~~~~~i~~-------~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      |+.+...+...+.+       ..+|+....+.+++.++..++.+.
T Consensus       155 g~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~  199 (473)
T PRK10429        155 AGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLR  199 (473)
T ss_pred             HHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHc
Confidence            76555444332211       124555555555554444443333

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.00  E-value=2.2e-08  Score=96.45  Aligned_cols=171  Identities=16%  Similarity=0.065  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+..+...++...+++....+++.|+.+.+|++..+++...........++.++.|+++||+ |+++.+.++..+..++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~  279 (382)
T PRK10091        201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL  279 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence            45444444454555555566778888888999999999999999999999999999999995 99999988888777776


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +++....  +                ..+...+..++.++|.++..+.......+..++.  +.   .+...  .....+
T Consensus       280 ~~~~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~---~~~~~--~~~~~~  334 (382)
T PRK10091        280 LMLFFFG--G----------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGG--EL---LGAAG--GQIAFN  334 (382)
T ss_pred             HHHHHHH--h----------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcc--hH---HHHHH--HHHHHH
Confidence            5544321  1                1233344444555665555444443333333221  11   22221  244578


Q ss_pred             HHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHH
Q 019064          177 LAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       177 iG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      +|..+|+.+.+++.+. .+|+..+.+.++..+++...+
T Consensus       335 ~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~  372 (382)
T PRK10091        335 LGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL  372 (382)
T ss_pred             HHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence            9999999999998885 689999988766555444433

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.00  E-value=1.5e-08  Score=100.78  Aligned_cols=176  Identities=10%  Similarity=0.009  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-----HHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-----TCLVFGT   90 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-----~i~~~~~   90 (346)
                      ..|.+.+..++....++++..+++.|+.+++|++..+++.....+.+...++.+++|+++||+ |||+     .......
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~  331 (476)
T PLN00028        253 RTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIV  331 (476)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHH
Confidence            345555554555555667777889999888999999999999999999999999999999995 8652     2221111


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      ....+..++.+.    .             ..+.+...+.+++.+++.++..+...+...+..+    +   .++...++
T Consensus       332 ~~l~~i~~~~~~----~-------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~---~~g~~~g~  387 (476)
T PLN00028        332 QTLGGVFCIWLG----R-------------ANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR----R---SLGVISGL  387 (476)
T ss_pred             HHHHHHHHHHhc----c-------------cchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh----h---hchhhhhh
Confidence            111222122111    1             0123334444555555554444444444444332    1   14556666


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcC
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      .....++|+.+++.+.. ..+..+|..+|.+.+++.+++.++.++.+
T Consensus       388 ~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~  433 (476)
T PLN00028        388 TGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH  433 (476)
T ss_pred             hhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence            55566667666665433 22345699999988888777777766554

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=98.99  E-value=9.4e-09  Score=103.16  Aligned_cols=140  Identities=16%  Similarity=0.043  Sum_probs=114.9

Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 019064           44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI  123 (346)
Q Consensus        44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~  123 (346)
                      +..+.+........+++..+..+++++.|.+||+ +|||++++++.++..++.++.+++.                   +
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~-~GRk~~~~~~~~~~~i~~~~~a~a~-------------------~  170 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR-FGRKPVLLVSLLLFIIFGILTAFAP-------------------N  170 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh-cccHHHHHHHHHHHHHHHHHHHHhC-------------------c
Confidence            3456677778888899999999999999999999 6999999999999998876655542                   5


Q ss_pred             HHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHH
Q 019064          124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISS  203 (346)
Q Consensus       124 ~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~  203 (346)
                      .+.+++.+++.|++.++...+...+++|.++++.      |....++ +.....++.+++..++|+..  +||+.+++..
T Consensus       171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~  241 (521)
T KOG0255|consen  171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS  241 (521)
T ss_pred             HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence            7889999999999999999999999999999655      4555555 66667777788888888877  8999998876


Q ss_pred             HHHHHHHHH
Q 019064          204 VATLIGLIA  212 (346)
Q Consensus       204 ~~~~~~~~i  212 (346)
                      +..++.++.
T Consensus       242 ~~~~~~~~~  250 (521)
T KOG0255|consen  242 IPSGLFLLL  250 (521)
T ss_pred             HHHHHHHHH
Confidence            655555444

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=98.97  E-value=1.8e-08  Score=98.32  Aligned_cols=165  Identities=8%  Similarity=-0.119  Sum_probs=110.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH-HHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT-CLVFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~-i~~~~~l~   92 (346)
                      +..|...+..++....++++..++|.|+++ ..|.+..+++...........++.+++|+++||+ ||++. +.+...+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~  320 (412)
T TIGR02332       242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA  320 (412)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence            345667778888889999999999999987 3477888888888888889999999999999995 86664 33333333


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++..+ ....  +                .....+.+..+.++|.....+.......|.++++      ++...+.+.+
T Consensus       321 ~~~~~~-~~~~--~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~~~~a~g~~~  375 (412)
T TIGR02332       321 AAGWLL-ASAT--D----------------HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQ------ARAIAIAVIN  375 (412)
T ss_pred             HHHHHH-HHhc--C----------------CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchH------HHHHHHHHHH
Confidence            333222 1110  0                1111222222333333322222223334455532      2678899999


Q ss_pred             HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVA  205 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~  205 (346)
                      ...++|.++++.+.+.+.+..| |..+|.+.++.
T Consensus       376 ~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~  409 (412)
T TIGR02332       376 ATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL  409 (412)
T ss_pred             HhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence            9999999999999999988774 99888766553

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK11462 putative transporter; Provisional

Probab=98.97  E-value=4.1e-08  Score=97.26  Aligned_cols=179  Identities=13%  Similarity=0.031  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh---cccchhHHH-HHHHHHHH
Q 019064           19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDT---YLSRFATCL-VFGTLEVL   94 (346)
Q Consensus        19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~---~lGR~~~i~-~~~~l~~~   94 (346)
                      .--..++..++.+..+..++..|+++.+|++...++.+..+-.+.-.+.-|+.|+++||   .+||||..+ ++.+...+
T Consensus        13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i   92 (460)
T PRK11462         13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGI   92 (460)
T ss_pred             hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHH
Confidence            33355677788888888899999999999999999999999999999999999999997   369876554 45566666


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++...   |...+          ......+++...+..++.........++.++..++  ++|   |.+..+|....
T Consensus        93 ~~~llf~~---p~~s~----------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~e---Rt~l~s~r~~~  154 (460)
T PRK11462         93 VCVLAYST---PDLSM----------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PTQ---RISLQSWRFVL  154 (460)
T ss_pred             HHHHHHhC---CCCCc----------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHH---HHHHHHHHHHH
Confidence            66555532   43211          22344455555567788888888888999988875  333   57777787788


Q ss_pred             HHHHHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHHh
Q 019064          175 TTLAAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      .++|.++++.+...+.+.       .||.....+.+++.++...+.+.
T Consensus       155 ~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~  202 (460)
T PRK11462        155 ATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF  202 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence            888877776654333222       35666555555544444443333

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=98.96  E-value=3.9e-08  Score=97.18  Aligned_cols=178  Identities=10%  Similarity=-0.027  Sum_probs=118.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH--------
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC--------   85 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i--------   85 (346)
                      ++.+|.+.+..++..+.++++..++|.|+.+.+|++..+++...........++.+++|+++|++ ++++..        
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~  338 (465)
T TIGR00894       260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI  338 (465)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence            45678888999999999999999999999999999999999988888888999999999999985 433211        


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhh
Q 019064           86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALA  165 (346)
Q Consensus        86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~  165 (346)
                      ..+......+..++.... ..               .......+.+.+.+.+.++..++......|..+    +   ..+
T Consensus       339 ~~~~~~~~~~~~~~~~~~-~~---------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~---~~g  395 (465)
T TIGR00894       339 FNGIGGLGPGIFAYALPY-LS---------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP----R---FLG  395 (465)
T ss_pred             HHHHHHHHHHHHHHHHHH-cC---------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh----h---HHH
Confidence            111111111111111110 00               012233334444444555555554444444433    2   256


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhhhhhcc---chhHHHHHHHHHHHHHHHHHHh
Q 019064          166 SYFNFYLFATTLAAMIGVTAIVYVFIDQ---GWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       166 ~~f~~~y~~~niG~~i~~~~~~~i~~~~---g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ...+......++|+.+++.+.+++.+..   +|..+|.+.++..+++.+++..
T Consensus       396 ~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~  448 (465)
T TIGR00894       396 FIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI  448 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence            7777778889999999999999887643   4888888888777777665543

>TIGR00900 2A0121 H+ Antiporter protein

Probab=98.96  E-value=1.3e-08  Score=95.91  Aligned_cols=155  Identities=14%  Similarity=0.042  Sum_probs=122.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhH-HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANG-ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~-~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      |..+..+...++....+++.. ...+.|.++.+|.+..+.+.+.........++.++.|+++||+ ||++.+..+..+..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~  288 (365)
T TIGR00900       210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG  288 (365)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence            445666666777777777777 6677777777999999999998888888999999999999995 99998887766666


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++..++....                 + +.+.+++..++.+++.+...+...++..|.+++++      +++.++.++.
T Consensus       289 ~~~~~~~~~~-----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~  344 (365)
T TIGR00900       289 LAILVVGLTP-----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS  344 (365)
T ss_pred             HHHHHHHhhc-----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence            6554444321                 1 24567777888999999999999999999988432      6788888899


Q ss_pred             HHHHHHHHHHhhhhhhhhccc
Q 019064          174 ATTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g  194 (346)
                      ..++|..+++.+.+++.++.|
T Consensus       345 ~~~~~~~~g~~~~g~l~~~~g  365 (365)
T TIGR00900       345 LSHAAWPLGLILAGPLADHLG  365 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999887653

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=98.95  E-value=1.1e-08  Score=96.80  Aligned_cols=162  Identities=15%  Similarity=0.106  Sum_probs=114.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH--HH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT--LE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~--l~   92 (346)
                      +..+.+.+..++.....+++...++.|+.+.+|++..+++.....+.....++.+++|+++||..+|++.......  ..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~  295 (379)
T TIGR00881       216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI  295 (379)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence            4566677777778888888889999999999999999999999999999999999999999985444443322211  11


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++..++...   +              ..+.....+..++.++...+..+....+..|.++++.      ++..++++.
T Consensus       296 ~~~~~~~~~~---~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~  352 (379)
T TIGR00881       296 IVSLLVYWLN---P--------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG  352 (379)
T ss_pred             HHHHHHHhcC---c--------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence            1222111110   1              1123334444555665555555666677788887543      577888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGF  199 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f  199 (346)
                      ...++|..+++.+.+++.++.||+..|
T Consensus       353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f  379 (379)
T TIGR00881       353 FFAYLGGILAGLPLGYLADGFGWAGAF  379 (379)
T ss_pred             HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence            889999999999999999999988654

>PRK09848 glucuronide transporter; Provisional

Probab=98.94  E-value=5.6e-08  Score=95.64  Aligned_cols=155  Identities=14%  Similarity=0.061  Sum_probs=101.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHH-HHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATC-LVFGTL   91 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i-~~~~~l   91 (346)
                      ..+.-...++..++++..+..++..|+++.+|++..+++.+.........+..++.|+++||.   +||||.. .++.+.
T Consensus         9 ~~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~   88 (448)
T PRK09848          9 TIVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP   88 (448)
T ss_pred             HHHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH
Confidence            333333466777888887888889999999999999999999999999999999999999994   4777755 455554


Q ss_pred             HHHHHHHHHhhhccCC-CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           92 EVLSLVMLTIQAYSKS-LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      ..+..+++...   |. ..          .......+++...+.+++.+...++..++..+...+  ++|   |..+..+
T Consensus        89 ~~~~~~~~~~~---~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~---r~~~~~~  150 (448)
T PRK09848         89 LMIFSVLVFWV---PTDWS----------HSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ--PQS---RARLGAA  150 (448)
T ss_pred             HHHHHHHHHhC---cCCCC----------cchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC--HHH---HHHHHHH
Confidence            44433332211   21 11          112334455556677888888888888877766654  333   3444444


Q ss_pred             HHH-----HHHHHHHHHHhhhhh
Q 019064          171 YLF-----ATTLAAMIGVTAIVY  188 (346)
Q Consensus       171 ~y~-----~~niG~~i~~~~~~~  188 (346)
                      -.+     ..++|.++++.+.+.
T Consensus       151 r~~~~~~~~~~~~~~~~p~i~~~  173 (448)
T PRK09848        151 RGIAASLTFVCLAFLIGPSIKNS  173 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            333     344555555555443

>PRK10133 L-fucose transporter; Provisional

Probab=98.94  E-value=3.4e-08  Score=97.22  Aligned_cols=167  Identities=14%  Similarity=0.058  Sum_probs=122.5

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      .+...+..++-..+.++...+++.|+ ++.+|++..+++.....+.+...++.+++|+++||+ ||++++..+..+..++
T Consensus       260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~  338 (438)
T PRK10133        260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL  338 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence            34444555666677777778888896 567899999999999999999999999999999996 9999998887777666


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      ..+..+.   +.               .  .-..++.+.++|.+.+.|+..+...+.++++. +   .-++....    .
T Consensus       339 ~~~~~~~---~~---------------~--~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-~---~as~l~~~----~  390 (438)
T PRK10133        339 CLISAFA---GG---------------H--VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-K---YGSSFIVM----T  390 (438)
T ss_pred             HHHHHHc---CC---------------h--HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-c---cchhHHhH----H
Confidence            5443332   11               1  12455778999999999999999999987532 1   12333321    2


Q ss_pred             HHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHH
Q 019064          176 TLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIA  212 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i  212 (346)
                      .+|+.+++.+.+++.+..| -+.+|.++.++.+.....
T Consensus       391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~  428 (438)
T PRK10133        391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF  428 (438)
T ss_pred             hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence            3567777888889988887 788898877666544443

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.94  E-value=5.2e-08  Score=93.96  Aligned_cols=176  Identities=15%  Similarity=0.048  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      ..+..+...++...+..+.....+.|+.+ +|++..+.+.+...... ...++.+++|+++||+ |+++.+.++..+..+
T Consensus       209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~  286 (390)
T TIGR02718       209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS  286 (390)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence            35556666677777777777788889975 79999999998877654 5556688999999996 999998887766533


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..+...... ....            ......+....+.+++.|...+...+...+..++++     .+.+.+......
T Consensus       287 ~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~  348 (390)
T TIGR02718       287 LALLWFAQAA-FWLA------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD-----QAGTDVTAVQST  348 (390)
T ss_pred             HHHHHHHHHH-cccC------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-----chHHHHHHHHHH
Confidence            3222222111 1000            012222333334445566666666666666655411     146677777778


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      .++|..+++.+++++.+..||...|.+.+++.+++.+
T Consensus       349 ~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~  385 (390)
T TIGR02718       349 RDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL  385 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            8999999999999999999999899877766555544

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=98.93  E-value=6.1e-08  Score=93.31  Aligned_cols=168  Identities=10%  Similarity=-0.007  Sum_probs=121.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.++.+++..++-...+.+....++.|++ ++|.+..+.+...........+..++.|++.||+ |+++.+.++.++..+
T Consensus       205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~  282 (382)
T PRK11128        205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV  282 (382)
T ss_pred             hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence            44566666666667777777788889996 5899988888888877777777888999999996 999999888888777


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-H
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-F  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-~  173 (346)
                      +.+++....                   +.+.+++..++.+++.+...+....+..++ ++++      +.+..+.+. .
T Consensus       283 ~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~  336 (382)
T PRK11128        283 RWGLMGSTT-------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL  336 (382)
T ss_pred             HHHHHHhhh-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence            765544321                   355667778888888888777777776665 3211      344555554 4


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      ...+|..+++.+.+++.|..|+. .|.+.+++.+++++
T Consensus       337 ~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~  373 (382)
T PRK11128        337 AMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALF  373 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHH
Confidence            55678889999999999988874 55554444444433

>PRK12307 putative sialic acid transporter; Provisional

Probab=98.93  E-value=6.5e-08  Score=94.15  Aligned_cols=144  Identities=15%  Similarity=-0.009  Sum_probs=100.3

Q ss_pred             HHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCC
Q 019064           30 GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLH  109 (346)
Q Consensus        30 a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~  109 (346)
                      .++++...++.|+++ .|.+..+++...........++.+++|+++||+ ||++.+..+.++..++..++...   +.  
T Consensus       246 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~--  318 (426)
T PRK12307        246 ANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ--  318 (426)
T ss_pred             HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc--
Confidence            344466788888876 699988888888888888899999999999996 99999888877766554433321   11  


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh
Q 019064          110 PPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV  189 (346)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i  189 (346)
                                  .....+...++..+.+..+..+..+.+..|.++++.      +++.++..+...++|+.+++.+.+++
T Consensus       319 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~l  380 (426)
T PRK12307        319 ------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATWL  380 (426)
T ss_pred             ------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence                        011112122222223333444556677788888543      56777777888899999999999999


Q ss_pred             hhccchhHH
Q 019064          190 FIDQGWWLG  198 (346)
Q Consensus       190 ~~~~g~~~~  198 (346)
                      .+..|+...
T Consensus       381 ~~~~g~~~~  389 (426)
T PRK12307        381 GITMGLGAA  389 (426)
T ss_pred             HHcccHHHH
Confidence            998886554

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=98.93  E-value=1.9e-08  Score=100.39  Aligned_cols=154  Identities=10%  Similarity=-0.008  Sum_probs=120.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |......+..++..+++++....++.|+++.+|++..+++...........++.+++|++.||+ ||++.+..+.++..+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~  337 (495)
T PRK14995        259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL  337 (495)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence            3344555667777778888888999999999999999999999999999999999999999996 999988888888888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++....  +              ..+.+......++.|+|.|...+.......+..++++      +......++..
T Consensus       338 ~~~~l~~~~--~--------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~  395 (495)
T PRK14995        338 SFYGLAMTD--F--------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMA  395 (495)
T ss_pred             HHHHHHHhc--C--------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHH
Confidence            776655432  1              1123445567788899999888888887877776443      45666777888


Q ss_pred             HHHHHHHHHhhhhhhhh
Q 019064          175 TTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~  191 (346)
                      .++|..+|+.+.+.+.+
T Consensus       396 ~~lG~~~G~ai~g~i~~  412 (495)
T PRK14995        396 YELGAGLGIAIFGLLLS  412 (495)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999888877655

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=98.92  E-value=1.9e-08  Score=99.46  Aligned_cols=156  Identities=13%  Similarity=0.119  Sum_probs=122.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |..+..++..++..+.+++....++.|+++.+|++..+++...........++.++.|++.||+ |||+.+.++..+..+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~  333 (485)
T TIGR00711       255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV  333 (485)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence            3445556667777888899999999999999999999999998888889999999999999995 999999888888888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++.... .+              ....+.+.....+.++|.+...+.......+.+++++      +....+.++..
T Consensus       334 ~~~~~~~~~-~~--------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~  392 (485)
T TIGR00711       334 GFYWRAFTF-TP--------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFT  392 (485)
T ss_pred             HHHHHhccC-CC--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHH
Confidence            776655321 01              1234455666788899998888777777777776432      56777788888


Q ss_pred             HHHHHHHHHhhhhhhhhc
Q 019064          175 TTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~  192 (346)
                      .++|+.+|+.+.+.+.++
T Consensus       393 ~~~g~~ig~~i~g~~~~~  410 (485)
T TIGR00711       393 RQLGGSIGTALITTILTN  410 (485)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            899999998888777664

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=98.91  E-value=9.2e-08  Score=92.73  Aligned_cols=171  Identities=16%  Similarity=0.165  Sum_probs=109.3

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      +.+++..++-..+........+.|+.+++|++..+.+.+..... +...++.+++|+++||+ ||++.+.++..+..+..
T Consensus       212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~  290 (402)
T PRK11902        212 WALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSN  290 (402)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence            33344444444433322234455677779999988888876554 45778889999999995 99998877776665554


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHH----HHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL----YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l----~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      +.+.+.+..+.               +.+.+.+..    +..+++.+...+....+..+.++.++          ++.+.
T Consensus       291 l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~  345 (402)
T PRK11902        291 LGYWVLAVTPK---------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YALLS  345 (402)
T ss_pred             HHHHHHHhcCC---------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HHHHH
Confidence            44433221111               223333333    34556677777888888888877332          23333


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ...++|..++..+++++.+..||+..|.+.+++.++++++.+
T Consensus       346 ~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~  387 (402)
T PRK11902        346 ALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW  387 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence            344677766667889999999999999888777766655543

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=98.91  E-value=1.1e-07  Score=90.80  Aligned_cols=162  Identities=12%  Similarity=0.036  Sum_probs=111.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+...+...+....+++.....+.|+++++|.+..+++.+.........++.+++|+++||+ ||++.+.++..+..++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~  286 (385)
T TIGR00710       208 FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSA  286 (385)
T ss_pred             hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence            44444455555666777777888899888999999999988888888999999999999995 99999988888777776


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +++..... +.             ......++....+.++|.+...+.......|.++++       +.+..+.+.....
T Consensus       287 ~~~~~~~~-~~-------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~  345 (385)
T TIGR00710       287 VLLEITAI-LG-------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHV-------AGTASALFGTLRL  345 (385)
T ss_pred             HHHHHHHH-hc-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------chHHHHHHHHHHH
Confidence            66655431 11             012344555566788888888888888888877632       2444555444444


Q ss_pred             H-HHHHHHhhhhhhhhccchhHHHHH
Q 019064          177 L-AAMIGVTAIVYVFIDQGWWLGFLI  201 (346)
Q Consensus       177 i-G~~i~~~~~~~i~~~~g~~~~f~i  201 (346)
                      . |++.++. .+.+.++.+|...+..
T Consensus       346 ~~g~i~~~~-~~~~~~~~~~~~~~~~  370 (385)
T TIGR00710       346 VLGAIVGYL-VSLIHGNTAWPMSLSC  370 (385)
T ss_pred             HHHHHHHHH-HHhccccChHHHHHHH
Confidence            4 4554444 4455555555544433

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=98.89  E-value=4.5e-08  Score=94.60  Aligned_cols=171  Identities=12%  Similarity=0.005  Sum_probs=117.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHccccc---CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEM---HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l---g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      ..+.++...++-...+......++.|+.+.+   +.+....+.+.+.......+..++.|++.||+ |||+.+.++..+.
T Consensus       216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~  294 (396)
T TIGR00882       216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM  294 (396)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence            3444444455545555555566777877654   45555566667766677777888999999995 9999999888888


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH-H
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-Y  171 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~-~  171 (346)
                      .++..++....                   +.+.+++...+.+++.+...+....+..+..+++.      +...+.. +
T Consensus       295 ~l~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~  349 (396)
T TIGR00882       295 SVRIIGSSFAT-------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGF  349 (396)
T ss_pred             HHHHHHHHhcC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHH
Confidence            88766544321                   23445666677777766555555556666666433      2333333 4


Q ss_pred             HHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      ..+.++|+.+++.+.+++.+..||...|.+.+++.++..++
T Consensus       350 ~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~  390 (396)
T TIGR00882       350 QFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI  390 (396)
T ss_pred             HHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence            56889999999999999999999999998877766655544

>PRK09848 glucuronide transporter; Provisional

Probab=98.89  E-value=6.2e-08  Score=95.34  Aligned_cols=162  Identities=12%  Similarity=0.042  Sum_probs=117.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.+...++..++...+++......+.|+++.+|.+................++.++.++++||+ |+++++.++.++..+
T Consensus       228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i  306 (448)
T PRK09848        228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC  306 (448)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence            4456666677777788877777778888888898766554444433455677888999999996 999999999988888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhh-hhhhhhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~-~~~~~~~f~~~y~  173 (346)
                      |.+++.+.   |.              .+.+.+++.+.+.++|.+...+...++.+|..|.++-+. ++..+.+++.+.+
T Consensus       307 ~~~~~~~~---~~--------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~  369 (448)
T PRK09848        307 GYLLFFWV---SV--------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF  369 (448)
T ss_pred             HHHHHHHc---Cc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence            87666542   21              134566677888999999999999999998887543211 1123667778888


Q ss_pred             HHHHHHHHHHhhhhhhhhccc
Q 019064          174 ATTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g  194 (346)
                      ...+|..+++.+.+.+-+..|
T Consensus       370 ~~klg~aig~~i~g~~l~~~G  390 (448)
T PRK09848        370 TRKCGQAIGGSIPAFILGLSG  390 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC
Confidence            899999999888776644333

>TIGR00895 2A0115 benzoate transport

Probab=98.88  E-value=3.8e-08  Score=93.91  Aligned_cols=148  Identities=16%  Similarity=0.087  Sum_probs=109.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +..+.+.+..++....++++..+++ |+.+++|.+..+++...........++.+++|+++||+ ||++.+.........
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~  327 (398)
T TIGR00895       250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF  327 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence            3345555666677788888877777 66677899999999998889999999999999999996 988544433333333


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ..++.. ..  +                +....++..++.+++.++..+...++.+|.++++.      +...+++++..
T Consensus       328 ~~~~~~-~~--~----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~  382 (398)
T TIGR00895       328 AVLVGS-TL--F----------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGI  382 (398)
T ss_pred             HHHHHH-Hh--h----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHH
Confidence            322222 11  1                23455667778889999999999999999998432      67788888888


Q ss_pred             HHHHHHHHHhhhhhh
Q 019064          175 TTLAAMIGVTAIVYV  189 (346)
Q Consensus       175 ~niG~~i~~~~~~~i  189 (346)
                      .++|..+++.+.+++
T Consensus       383 ~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       383 GRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHhHHhc
Confidence            999999999888765

>TIGR00889 2A0110 nucleoside transporter

Probab=98.87  E-value=1.5e-07  Score=92.08  Aligned_cols=165  Identities=15%  Similarity=0.084  Sum_probs=101.8

Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q 019064           20 VFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVML   99 (346)
Q Consensus        20 i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll   99 (346)
                      +.+..++...++-...+.++.|+++++|++..+.+.+.+.+.....++++++|.++||+-+||+++.++.++..++..+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~   86 (418)
T TIGR00889         7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA   86 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            44555566666655669999999999999999999999999999999999999999996344777777777666655544


Q ss_pred             HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC--ChhhhhhhhhHHHHHHHHHHH
Q 019064          100 TIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN--DPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus       100 ~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~--~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      .+..                   +.+.+++.+.+.+++.+...+...+...+...+.  +......+.+.+      ..+
T Consensus        87 ~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~------G~l  141 (418)
T TIGR00889        87 AQVT-------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVM------GTI  141 (418)
T ss_pred             HHhc-------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeee------hhH
Confidence            4321                   2444555666666665555444333221111100  000000122333      347


Q ss_pred             HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL  210 (346)
Q Consensus       178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~  210 (346)
                      |.++++.+++.+.....|. .|.+.++..++..
T Consensus       142 G~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~  173 (418)
T TIGR00889       142 GFIAAMWAVSLLDIELSNI-QLYITAGSSALLG  173 (418)
T ss_pred             HHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence            8888888888774433343 4555554444433

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00896 CynX cyanate transporter

Probab=98.87  E-value=8e-08  Score=91.32  Aligned_cols=154  Identities=14%  Similarity=-0.009  Sum_probs=114.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +..+.+.+..++....++++..+++.|+++ .|.+..+++.+...+.....++.++.|+++||+-+|++++.++..+..+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~  275 (355)
T TIGR00896       197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV  275 (355)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence            455666666667788888998999999975 7999999999999999999999999999999963566777777777777


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++....   .               ....  ....+.++|.|...+...+...+..++++     .++..++..+..
T Consensus       276 ~~~~~~~~~---~---------------~~~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~  330 (355)
T TIGR00896       276 GLCGLLFAP---M---------------HGLW--AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQSI  330 (355)
T ss_pred             HHHHHHHhh---h---------------hHHH--HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHHH
Confidence            766555431   1               1111  13457889999988887777666554321     135566666667


Q ss_pred             HHHHHHHHHhhhhhhhhccc
Q 019064          175 TTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g  194 (346)
                      .++|.++++.+.+++.++.|
T Consensus       331 ~~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       331 GYLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            88888999999999988765

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=98.87  E-value=1.2e-07  Score=93.36  Aligned_cols=186  Identities=12%  Similarity=-0.008  Sum_probs=122.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .+..|.+.+..++.--+|.+....++.|+++.+  +...+............+..+++|++|||+ |++|++.++.++..
T Consensus       251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~  327 (462)
T PRK15034        251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMA  327 (462)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHH
Confidence            345788888888888888889889999998765  333333334445677888899999999995 99999998887776


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC----------Ch-----
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN----------DP-----  158 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~----------~~-----  158 (346)
                      ++...+.+.  +|..           ...+.+.+.++.+.+.++.|.-+..+..++.+.|+++          ++     
T Consensus       328 i~~~~~~l~--lp~~-----------~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~  394 (462)
T PRK15034        328 IFSALLFLT--LPGT-----------GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR  394 (462)
T ss_pred             HHHHHHHHH--hccc-----------cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence            665443332  2321           1235666766666666666666666666666666530          00     


Q ss_pred             hhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHHh
Q 019064          159 KGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       159 ~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ..+++.+...++.-....+|+.+-|.+.+...+. -++..+|.+..+..++++++-+.
T Consensus       395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~  452 (462)
T PRK15034        395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL  452 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence            1112345566666666777777777665655444 45777888777777766666554

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=98.86  E-value=2e-07  Score=92.14  Aligned_cols=154  Identities=8%  Similarity=-0.058  Sum_probs=101.7

Q ss_pred             HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064           37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS  116 (346)
Q Consensus        37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~  116 (346)
                      +.+.+ .+.+|.+...+............++.+++|+++||+ |||+.++.+.++..++.+++..... +.         
T Consensus       293 ~~p~i-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~~---------  360 (479)
T PRK10077        293 YAPEI-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-TQ---------  360 (479)
T ss_pred             HHHHH-HHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-cC---------
Confidence            33433 346788877666666666777888899999999996 9999999999988888777664321 11         


Q ss_pred             CCCCchhHHHHHHHHHHHHHhccc-cccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------hh
Q 019064          117 SCLKGAIAAYFYGSLYLYSLGCGG-NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV------YV  189 (346)
Q Consensus       117 ~~~~~~~~~~~~~~l~l~~iG~g~-~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~------~i  189 (346)
                          . .......++.+.+++.+. ..|+..++..|.++++.      |...+++.+...++|..+++.+.+      ++
T Consensus       361 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~  429 (479)
T PRK10077        361 ----A-PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNSWL  429 (479)
T ss_pred             ----c-ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccch
Confidence                0 112233344444444443 34677888899987433      677777777777777777655444      44


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHH
Q 019064          190 FIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       190 ~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      .++.+|+..|.+.++..+++.++.
T Consensus       430 ~~~~~~~~~~~~~~~~~~~~~~~~  453 (479)
T PRK10077        430 VAHFHNGFSYWIYGCMGVLAALFM  453 (479)
T ss_pred             hhhccCccHHHHHHHHHHHHHHHH
Confidence            567888888877665555444443

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=98.86  E-value=5.5e-08  Score=97.27  Aligned_cols=167  Identities=13%  Similarity=0.073  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHhHHHHHHHcccccCCchhHHHH------------HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           22 VLSALENMGFIANGISMVLYFKNEMHFDIAGASN------------TLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        22 ~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~------------~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      ...++..+.+|++..+++.+++ .+|++..+++.            ..........++.++.++++||+ |||++++++.
T Consensus       295 ~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~  372 (502)
T TIGR00887       295 GSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGF  372 (502)
T ss_pred             HHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHH
Confidence            3445567788998888888885 57876543221            11122334445678889999995 9999998888


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .+..++..++.+... + .            ... ..+........++..+..+....+.+|.+|.+.      |....+
T Consensus       373 ~~~~~~~~~l~~~~~-~-~------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g  431 (502)
T TIGR00887       373 FILTVLFFVLGFAYN-H-L------------STH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHG  431 (502)
T ss_pred             HHHHHHHHHHHHHHH-h-c------------chh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHH
Confidence            777766655554321 0 0            001 111111111222223344556667789998654      678888


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhc----------cchhHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFID----------QGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~----------~g~~~~f~i~~~~~~~~~~  211 (346)
                      +.+...++|+++++.+.+++.+.          .++...|.+.+++.+++.+
T Consensus       432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i  483 (502)
T TIGR00887       432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGIL  483 (502)
T ss_pred             HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHH
Confidence            88888999999999999988763          3445566666655555544

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.85  E-value=6e-08  Score=99.57  Aligned_cols=246  Identities=12%  Similarity=-0.009  Sum_probs=180.8

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHH
Q 019064           46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAA  125 (346)
Q Consensus        46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~  125 (346)
                      .+....+.+...+++....++++++....+|-..|+...+...++.+.++.+.+.+.+ ++...          +.....
T Consensus        15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~lla-i~a~~----------~~~~~~   83 (654)
T TIGR00926        15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLS-FGAIP----------SSGHPL   83 (654)
T ss_pred             HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hccCc----------ccccch
Confidence            3444556778889999999999999999999999999999999999999988887775 23211          123345


Q ss_pred             HHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc-hhH-------
Q 019064          126 YFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG-WWL-------  197 (346)
Q Consensus       126 ~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g-~~~-------  197 (346)
                      ...+.++.++++.+|..++.+++.+++.+..+   ..++++++++|+|..+.+.+. .+++..+..... +..       
T Consensus        84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~~~  159 (654)
T TIGR00926        84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQDC  159 (654)
T ss_pred             HHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCcc
Confidence            55678888999999999999999999998754   266678999999999999885 566666665443 332       


Q ss_pred             HHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHhccCCCCCCCchhhhhhhhcccCCccccCCCCccc
Q 019064          198 GFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPDNPEELYEINKIERVGTEERIPHTNQFR  277 (346)
Q Consensus       198 ~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (346)
                      -++..++.+++.++.++.+...++..+|.+.+-..+.+++....+..+.+                      ..+     
T Consensus       160 ~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~----------------------~~~-----  212 (654)
T TIGR00926       160 YPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKR----------------------FST-----  212 (654)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHh----------------------hcc-----
Confidence            23467777888888888888888877887766656777765555433110                      000     


Q ss_pred             cccccccccCCCCCCCCccc--CCchhHHHHHHHHhHhHHHhhhHHHHHHHhcccchhhhccccccC
Q 019064          278 CLDKAAIVPKDSTAAAPWRV--CTVTQVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSF  342 (346)
Q Consensus       278 ~ld~a~~~~~~~~~~~~w~~--~~~~~Ve~vK~~~r~lpi~~~~i~~~~~~~q~~t~~~~Q~~~m~~  342 (346)
                       .+..+.        ..|-.  ....+++++|.+.|+++++...+++++.+.|....+..|..+|+.
T Consensus       213 -~~~~~~--------~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~  270 (654)
T TIGR00926       213 -RSEHWP--------LHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATR  270 (654)
T ss_pred             -CCcccc--------hhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence             111110        12211  244557889999999999999999999999988888888877764

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=98.85  E-value=2.5e-07  Score=89.69  Aligned_cols=166  Identities=13%  Similarity=0.039  Sum_probs=113.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |..+..+...++...++++...++++++.+++|++..+++.....+.....++.++.|++.||. + ++.+..+..+..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~-~~~l~~~~~~~~~  293 (394)
T PRK10213        216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-V-KLALAGAPLVLAV  293 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-c-hhHHHHHHHHHHH
Confidence            4455555555666666777666764444567899999889988888888999999999999994 4 4444444444333


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ...++....                  .+.+.+.+...+.+++.+...+...+++.+..+++.       ++..+.++..
T Consensus       294 ~~~~l~~~~------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  348 (394)
T PRK10213        294 SALVLTLWG------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQA-------EKAGSIQVAV  348 (394)
T ss_pred             HHHHHHHHh------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccH-------HHHHHHHHHH
Confidence            322222221                  124556667778899998888888888887776331       2334455566


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATL  207 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~  207 (346)
                      .++|..+|+.+.+++.+..|+...+...+++.+
T Consensus       349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~  381 (394)
T PRK10213        349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLML  381 (394)
T ss_pred             HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence            789999999999999998898888877665443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.84  E-value=6.6e-08  Score=94.64  Aligned_cols=159  Identities=14%  Similarity=0.114  Sum_probs=127.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |....+++..++..+++.......+.|.+..+|.+ ...+.......+...++.++.++++||+ ||++++..+..+..+
T Consensus       225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~  302 (428)
T PF13347_consen  225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL  302 (428)
T ss_pred             chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence            56777888888888888888888888888888887 4456666677888888999999999996 999999999999999


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhh-hhhhhhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKG-AKALASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~-~~~~~~~f~~~y~  173 (346)
                      +.+++.+...                 .+.+.+++...+.++|.++..+...++.+|..+.++-+. ++..+.+++.+.+
T Consensus       303 ~~~~~~~~~~-----------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~  365 (428)
T PF13347_consen  303 GFLLLFFLGP-----------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF  365 (428)
T ss_pred             HHHHHHHHHh-----------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence            9888776531                 256788888999999999999999999999998643221 1224667777888


Q ss_pred             HHHHHHHHHHhhhhhhhhc
Q 019064          174 ATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~  192 (346)
                      ...+|..++..+.+.+.+.
T Consensus       366 ~~k~~~~la~~i~g~~l~~  384 (428)
T PF13347_consen  366 FIKIGQGLAGAIVGLLLAL  384 (428)
T ss_pred             hhHHHHHHHHHHHHHHHHH
Confidence            8999999998887766443

>PRK10054 putative transporter; Provisional

Probab=98.83  E-value=8.5e-08  Score=92.97  Aligned_cols=174  Identities=14%  Similarity=-0.023  Sum_probs=120.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHccc--ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKN--EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~--~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      |..+...+..++..+.+......++.|+..  +.+.+....+.+...+........++.|.+.||+ |+++.+.++..+.
T Consensus       206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~  284 (395)
T PRK10054        206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF  284 (395)
T ss_pred             ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence            445555566666666666565666777653  3455555566666666666666667889999996 9999998888888


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++...+....                  .+.+.+.+...+.++|.+...|+..+.+.+..|++.      ++.+++. +
T Consensus       285 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~-~  339 (395)
T PRK10054        285 VIGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSA-Q  339 (395)
T ss_pred             HHHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhH-H
Confidence            88876655421                  134445566778889988888888888888777543      3455554 3


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      ...++|..+|+.+.+++.|..|....|.+.+++..++.++..
T Consensus       340 ~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~  381 (395)
T PRK10054        340 SLGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML  381 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence            356689999999999999999988888776555554444443

>PF13347 MFS_2: MFS/sugar transport protein

Probab=98.82  E-value=2.5e-08  Score=97.58  Aligned_cols=178  Identities=13%  Similarity=0.042  Sum_probs=127.2

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh----hcccchhH-HHHHHHHHHHHHHH
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD----TYLSRFAT-CLVFGTLEVLSLVM   98 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD----~~lGR~~~-i~~~~~l~~~G~~l   98 (346)
                      .+...+.+.....++..|+++.+|+++..++.+..+......+..|+.|+++|    | +||||- ++++..+..++.++
T Consensus        10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr-~Grrrp~~l~g~i~~~~~~~l   88 (428)
T PF13347_consen   10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTR-WGRRRPWILIGAILLALSFFL   88 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeeccc-ccccceEeehhhHHHHHHHHH
Confidence            35566667667788999999999999999999999999999999999999999    6 487664 55677778887776


Q ss_pred             HHhhhccC-CCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           99 LTIQAYSK-SLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        99 l~l~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      +....  | ...          .......+.+..++..++......+..++++|..++.+  |   |.+..++-....++
T Consensus        89 lf~~~--p~~~~----------~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~--~---R~~l~~~~~~~~~~  151 (428)
T PF13347_consen   89 LFSPP--PAGLS----------FTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD--E---RTRLSSWRMIFSMI  151 (428)
T ss_pred             hhccc--cchhh----------hhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh--h---hhhHHHHHHHHHHH
Confidence            66431  2 111          01234455666777889999999999999999987644  2   56666666666777


Q ss_pred             HHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064          178 AAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALAIGKPF  219 (346)
Q Consensus       178 G~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~~~~~~  219 (346)
                      |.++...+.+.+.+.       .+|++...+.+++.++..++.....|+
T Consensus       152 g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke  200 (428)
T PF13347_consen  152 GSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE  200 (428)
T ss_pred             HHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence            776554444443321       168887777777666666666555554

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=98.81  E-value=1.4e-07  Score=103.12  Aligned_cols=163  Identities=13%  Similarity=-0.011  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh-HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA-GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~-~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      .++..++..++-.+..+.+..+++.|+.+.+|++.. .++.+.....++..++.++.|+++||+ ++++.+.++.++..+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~  311 (1146)
T PRK08633        233 VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLAL  311 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHH
Confidence            344444555555566667778899999999999988 888888888888899999999999996 998888888777777


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+++....                   +.+.+++..++.+++.++..+...+++.+..+++.      +++.++..++.
T Consensus       312 ~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~  366 (1146)
T PRK08633        312 SLFLLPTAP-------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFL  366 (1146)
T ss_pred             HHHHHHHhh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHH
Confidence            665555432                   34556677788899999988888999988887654      57778888888


Q ss_pred             HHHHHHHHHhhhhhhhh-ccchhHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFI-DQGWWLGFLISSV  204 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~  204 (346)
                      .++|.++++.+++.+.. .+++...|.+.+.
T Consensus       367 ~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~  397 (1146)
T PRK08633        367 QNVGMLLFLALTTLFSGLGLSPAGLFYLIAL  397 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence            88888777666655543 2344445544433

>PRK10429 melibiose:sodium symporter; Provisional

Probab=98.79  E-value=4.5e-07  Score=90.07  Aligned_cols=165  Identities=13%  Similarity=0.005  Sum_probs=114.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |....+++..++..++++......+.|++..++ +....+.+.........++.++.++++||+ ||++++.++..+..+
T Consensus       231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~  308 (473)
T PRK10429        231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL  308 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence            566777777788887777666666655555544 344445555555567778888999999996 999999988887776


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y~  173 (346)
                      +.+.+.+....+              ..+.+.+++...+.+++.+...+...++.+|..|.++-+ .++..+.+|+...+
T Consensus       309 ~~~~~~~~~~~~--------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~  374 (473)
T PRK10429        309 SCGVLLLMGLAA--------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTM  374 (473)
T ss_pred             HHHHHHHHhccC--------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHH
Confidence            665554332111              113455666777888999999999999999997743211 11223557888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccch
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~  195 (346)
                      ...+|..+++.+.+++.+..||
T Consensus       375 ~~K~~~al~~~i~g~~l~~~Gy  396 (473)
T PRK10429        375 VVKGGSAFAAFFIGVVLGLIGY  396 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCC
Confidence            8999999998888877554443

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=98.78  E-value=5.4e-07  Score=86.87  Aligned_cols=177  Identities=14%  Similarity=0.040  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHH--HHHHHHH-HHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTL--TNFFGST-FLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~--~~~~~~~-~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ...+....+.+.+.+.-+.+.++.|+++ .|.+..+.+...  ....... ...|++.++.+||+ ||||..++.+.+..
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~   80 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV   80 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence            4556677788888888788888988875 599999998863  3334444 44555558889984 99998766653322


Q ss_pred             H-HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           94 L-SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        94 ~-G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      . ....+...  .+.             ......+.....+.++..+...+...++..|+.++++      +........
T Consensus        81 ~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~  139 (390)
T TIGR02718        81 SACLASLALV--GPD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQI  139 (390)
T ss_pred             HHHHHHHHcC--Ccc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHH
Confidence            1 12222211  111             1112233334444555555555555555555544221      233444455


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhc
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      ++..+|.+++..+.+++.++.||+..|.+.++..++..+..+..
T Consensus       140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~  183 (390)
T TIGR02718       140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL  183 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            56688999998888899999999999998887766555544433

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=98.74  E-value=3.6e-07  Score=88.76  Aligned_cols=154  Identities=14%  Similarity=0.065  Sum_probs=101.4

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      .....++.|+++..+ +..+.+.+...............+++.|+.++.++.+..+..+..++..++....         
T Consensus       226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~---------  295 (400)
T PRK11646        226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS---------  295 (400)
T ss_pred             HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh---------
Confidence            344567888876655 5566777666655544444444455665545666667777777777765554331         


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~  192 (346)
                                +.+...+...+.++|.+...|...+...|..|++.      +++.++.+....++|..+|+.+.+++.++
T Consensus       296 ----------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~  359 (400)
T PRK11646        296 ----------NLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDL  359 (400)
T ss_pred             ----------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence                      23344555566778888888898999999998654      57778888888999999999999999876


Q ss_pred             c---c-hhHHHHHHHHHHHHHHHH
Q 019064          193 Q---G-WWLGFLISSVATLIGLIA  212 (346)
Q Consensus       193 ~---g-~~~~f~i~~~~~~~~~~i  212 (346)
                      .   + ....+.+..++.+++.++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~  383 (400)
T PRK11646        360 GKALNQPELPWMMLGIIGLITLLA  383 (400)
T ss_pred             HhhcCCcchHHHHHHHHHHHHHHH
Confidence            3   2 244554444444444433

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=98.73  E-value=4e-07  Score=91.44  Aligned_cols=174  Identities=17%  Similarity=0.062  Sum_probs=135.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      .+..++...++-.+...++...+|.+..+.+|.+....+.+.+++.+++.++.++.+.+.+++ ++.+.+..+.+++.++
T Consensus       219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~  297 (524)
T PF05977_consen  219 PLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALA  297 (524)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHH
Confidence            344445555555565556667788898999999999999999999999999999999999985 8888888888877777


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      .+.+.++.                   +.+...+.+++.|++.........+..-...|++      .+++.++.+....
T Consensus       298 ~~~lal~~-------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~------~~GRv~si~~~~~  352 (524)
T PF05977_consen  298 LLLLALSP-------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDW------VRGRVFSIYQMVF  352 (524)
T ss_pred             HHHHhcch-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH------HHhHHHHHHHHHH
Confidence            66665542                   4566667777888888777777666665555532      3788999988888


Q ss_pred             HHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          176 TLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+..+|..+.+++.+.+|-..++.+.++.++++.++...
T Consensus       353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~  392 (524)
T PF05977_consen  353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR  392 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            8889999999999999999999998888777666665543

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK09669 putative symporter YagG; Provisional

Probab=98.72  E-value=6.5e-07  Score=88.06  Aligned_cols=161  Identities=12%  Similarity=0.103  Sum_probs=104.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      |..+.+++..++...+..... .+..|+ +..++.. ...+...........++.+++++++||+ ||++++.++.++..
T Consensus       229 ~~~~~l~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~  305 (444)
T PRK09669        229 SQWRIMFIFNVVLLTAVVTRG-GATLYYVNYVLLRP-DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFV  305 (444)
T ss_pred             chHHHHHHHHHHHHHHHHHHh-hhhheeeeeecCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence            334455555555555554333 344444 4344432 2233344445566667788899999996 99999988876665


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChh-hhhhhhhHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPK-GAKALASYFNFYL  172 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~-~~~~~~~~f~~~y  172 (346)
                      ++...+.+.   +              ..+.+.+++...+.++|.++..+...++.+|..|.++.+ .++..+.+++.+.
T Consensus       306 ~~~~~~~~~---~--------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~  368 (444)
T PRK09669        306 ILSALIFFI---P--------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNL  368 (444)
T ss_pred             HHHHHHHHh---C--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHH
Confidence            443322221   1              114556677778899999999999999999998743321 1122356778888


Q ss_pred             HHHHHHHHHHHhhhhhhhhccch
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~  195 (346)
                      ++.++|..+|+.+.+++-+..||
T Consensus       369 ~~~klg~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        369 FAIKLGLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCC
Confidence            89999999999988887665555

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=98.72  E-value=2.5e-07  Score=101.41  Aligned_cols=183  Identities=13%  Similarity=-0.089  Sum_probs=126.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +.++..++..++-.+.+.++...++.|+++.+|.+...++.+.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~  303 (1140)
T PRK06814        225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL  303 (1140)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence            4566667777777788888889999999999999999999999999999999999999999986 655655555554444


Q ss_pred             HHHHHHhhhccCCCCCCCCCCC-CC-CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKS-SC-LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~-~~-~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      +.+.+.+.. .....++..... .+ ....+.+.++++.++++++.+...+...++..+..+++.      +++.++.+.
T Consensus       304 ~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~  376 (1140)
T PRK06814        304 FGLDLAFAS-SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANN  376 (1140)
T ss_pred             HHHHHHhcc-cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHH
Confidence            433333210 000000000000 00 001234566778888999999999999999999988655      577778878


Q ss_pred             HHHHHHHHHHHhhhhhhhh-ccchhHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFI-DQGWWLGFLISSVA  205 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~-~~g~~~~f~i~~~~  205 (346)
                      ...++|..+++.+.+.+.+ ..++...|.+.+++
T Consensus       377 ~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~  410 (1140)
T PRK06814        377 VLNAAFMVAGTIILALLQALGFSIPWIILFIALA  410 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            8888888889888888864 34666666554443

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=98.71  E-value=9.5e-08  Score=95.52  Aligned_cols=175  Identities=15%  Similarity=0.088  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHH---HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGIS---MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~---l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      -|.+.+..++-++..+|+...   +...+.+.++.+..+++++.++..+..++..|+.+.+.||+ |.|.+++.+.+++.
T Consensus        44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~  122 (509)
T KOG2504|consen   44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA  122 (509)
T ss_pred             eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence            467777777777777777644   34555678899999999999999999999999999999996 99999999999999


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH-HHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLY-LYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~-l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      +|+++-..+.                   +.+.+++... +.|+|.|.........++..|+.+       |+..-..--
T Consensus       123 ~g~~lssF~~-------------------~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia~  176 (509)
T KOG2504|consen  123 LGLLLSSFAT-------------------SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIAV  176 (509)
T ss_pred             HHHHHHHHHh-------------------hHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhhh
Confidence            9988877653                   3555666554 478999999888888888777632       233333323


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      ....+|..+=+.+.-++.+++||+.++++-+.+++-.++.-...++
T Consensus       177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp  222 (509)
T KOG2504|consen  177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP  222 (509)
T ss_pred             ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence            3455566665666777888899999998877766544444444444

>TIGR00901 2A0125 AmpG-related permease

Probab=98.70  E-value=2.5e-07  Score=87.84  Aligned_cols=145  Identities=15%  Similarity=0.113  Sum_probs=107.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHH-HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFF-GSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~-~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      ..+.+++..++..++++++...++.|+++ +|++..+.+.+..... ....++.+++|+++||+ ||++.+.+++++..+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~  287 (356)
T TIGR00901       210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL  287 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence            36666777777899999999999999987 9999999888887665 45678889999999996 999999888888777


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++...+.  ......      -+..+.+.+....++.+++.+...+...++..+.+|++.      +++.++.++..
T Consensus       288 ~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~  353 (356)
T TIGR00901       288 TNAGFVWLAS--NGHHDG------ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSL  353 (356)
T ss_pred             HHHHHHHHHh--cCcccc------cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHH
Confidence            6665544321  100000      000234556666777899999999999999999999765      56777766554


Q ss_pred             HH
Q 019064          175 TT  176 (346)
Q Consensus       175 ~n  176 (346)
                      .|
T Consensus       354 ~~  355 (356)
T TIGR00901       354 SA  355 (356)
T ss_pred             Hh
Confidence            43

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=98.70  E-value=4.5e-07  Score=85.32  Aligned_cols=153  Identities=14%  Similarity=0.096  Sum_probs=105.9

Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 019064           44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAI  123 (346)
Q Consensus        44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~  123 (346)
                      +++|++..+.+.+...-.+.+.+..++.|.++||+ |||+..+..+++|.+..+.-.                    ..+
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~--------------------~~~  120 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH--------------------SSN  120 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh--------------------ccc
Confidence            56899999999998887888888888999999996 999999999999988754211                    114


Q ss_pred             HHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhhhhhccch--hHHHH
Q 019064          124 AAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGW--WLGFL  200 (346)
Q Consensus       124 ~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-~~~niG~~i~~~~~~~i~~~~g~--~~~f~  200 (346)
                      ...+++++++-|+++.....+.-+-..-+..+++-+ ++.....|+..- +...+-++++..++-++.+..+.  ..+|.
T Consensus       121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~  199 (354)
T PF05631_consen  121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFD  199 (354)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHH
Confidence            678999999999999988887777655444433311 112344454332 22333445555555566665554  67888


Q ss_pred             HHHHHHHHHHHHHHhcCc
Q 019064          201 ISSVATLIGLIALAIGKP  218 (346)
Q Consensus       201 i~~~~~~~~~~i~~~~~~  218 (346)
                      .+.++.+++.++.....+
T Consensus       200 ~a~~~l~~~~~~I~~~W~  217 (354)
T PF05631_consen  200 AAIVLLAVAAVLILKTWP  217 (354)
T ss_pred             HHHHHHHHHHHHHHhccc
Confidence            888777777666554443

>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.70  E-value=3.4e-07  Score=90.55  Aligned_cols=180  Identities=17%  Similarity=0.193  Sum_probs=124.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----hhHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR----FATCLVFGT   90 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR----~~~i~~~~~   90 (346)
                      +.+|.+.+..+++.++++.+..++|.|+.+.+|++..+.+....+-.....+.-+++|++||+...|    ..+..+.-.
T Consensus       258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~  337 (466)
T KOG2532|consen  258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT  337 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence            5689999999999999999999999999999999999999999998999999999999999997331    122233333


Q ss_pred             HHHHHHHHHHh-hhccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064           91 LEVLSLVMLTI-QAYSKSLHPPDCGKSSCLKG-AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF  168 (346)
Q Consensus        91 l~~~G~~ll~l-~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f  168 (346)
                      +...|..++.+ .++.+.           +.. .....+.++..+.|+-.+|+.-|..-. +.|+          -...+
T Consensus       338 i~~~~~ai~l~~l~~~~~-----------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~----------a~~l~  395 (466)
T KOG2532|consen  338 IAFGGPAVFLLVLAFTSD-----------EHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQH----------AGFVM  395 (466)
T ss_pred             HHHHHHHHHHHeeeecCC-----------CcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchH----------HHHHH
Confidence            33332222221 222221           111 233334444445555555554443211 2222          35667


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhc---cchhHHHHHHHHHHHHHHHHHHhc
Q 019064          169 NFYLFATTLAAMIGVTAIVYVFID---QGWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       169 ~~~y~~~niG~~i~~~~~~~i~~~---~g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      +...+..++.++++|.+++++..+   -.|+..|++.+++++++.++|.+.
T Consensus       396 g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f  446 (466)
T KOG2532|consen  396 GIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF  446 (466)
T ss_pred             HHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence            777888999999999999988743   379999999999888888776543

>TIGR00898 2A0119 cation transport protein

Probab=98.69  E-value=4.5e-07  Score=90.45  Aligned_cols=128  Identities=11%  Similarity=-0.051  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc
Q 019064           60 FFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG  139 (346)
Q Consensus        60 ~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g  139 (346)
                      .......+.+++++++||+ |||+.+.++.++..++.+++...   +..              ..+...+...+.+++.+
T Consensus       364 ~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~---~~~--------------~~~~~~~~~~~~~~~~~  425 (505)
T TIGR00898       364 SGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV---PVD--------------LYFLRTALAVLGKFGIT  425 (505)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc---CCC--------------chHHHHHHHHHHHHHHH
Confidence            3455667788899999995 99999998888877776655443   211              11233334445556666


Q ss_pred             ccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          140 GNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       140 ~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      +..+....+.+|.+|++.      |+...++......+|+++++.+.+ +. ..++...+.+.+++.+++.++.
T Consensus       426 ~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~  491 (505)
T TIGR00898       426 SAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILT  491 (505)
T ss_pred             HHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHH
Confidence            677888889999998533      577788888889999999998887 43 3556667766665555444433

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=98.67  E-value=2.2e-07  Score=87.20  Aligned_cols=143  Identities=18%  Similarity=0.195  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFD-IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s-~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      |.++...++..+.+++...+++.|+.+.+|++ ..+++...........++.++.|+++||+ |+++.+.+......++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~  287 (352)
T PF07690_consen  209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGA  287 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHH
Confidence            44556666666788888999999999999999 78888888888989999999999999995 99888887777777766


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATT  176 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~n  176 (346)
                      +.+.+...                ..+....+...++.+++.+...+...++..|.+|++.      +++.++.+....+
T Consensus       288 ~~~~~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~  345 (352)
T PF07690_consen  288 LGLLLLPF----------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIGS  345 (352)
T ss_dssp             HHHCCSHH----------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHHH
T ss_pred             HHHHHHHH----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHH
Confidence            65555431                1134566667888999999999999999999997543      5788888888899


Q ss_pred             HHHHHHH
Q 019064          177 LAAMIGV  183 (346)
Q Consensus       177 iG~~i~~  183 (346)
                      +|..++|
T Consensus       346 ~~~~igP  352 (352)
T PF07690_consen  346 LGGIIGP  352 (352)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHCC
Confidence            9998876

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.65  E-value=2e-07  Score=92.57  Aligned_cols=144  Identities=19%  Similarity=0.158  Sum_probs=109.5

Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCch
Q 019064           43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGA  122 (346)
Q Consensus        43 ~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~  122 (346)
                      .+++++...+-+.+.++|.++..++.+++|+|.||+ .-.+.+..+.+...+-. +++..                  -+
T Consensus        73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~-~~~~~------------------~~  132 (495)
T KOG2533|consen   73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFG-FLTAA------------------VH  132 (495)
T ss_pred             ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHH-HHHHH------------------Hh
Confidence            356788888999999999999999999999999996 73443333333222211 11111                  12


Q ss_pred             hHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh------ccchh
Q 019064          123 IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI------DQGWW  196 (346)
Q Consensus       123 ~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~------~~g~~  196 (346)
                      +.+.+++.+++.|+.+++..|+...+.+..|.+++      +...+.++|.+.++|.++|..+...+.+      ..||+
T Consensus       133 s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~  206 (495)
T KOG2533|consen  133 SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWR  206 (495)
T ss_pred             hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCce
Confidence            57789999999999999999999999999999654      5677888898999999999888877543      46999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 019064          197 LGFLISSVATLIGLIA  212 (346)
Q Consensus       197 ~~f~i~~~~~~~~~~i  212 (346)
                      +.|+|.+++.++..++
T Consensus       207 ~~FiI~G~i~~~~gi~  222 (495)
T KOG2533|consen  207 WLFIIEGVITLVLGIV  222 (495)
T ss_pred             eehhHHHHHHHHHHhe
Confidence            9999998776554443

>PRK11043 putative transporter; Provisional

Probab=98.65  E-value=3.1e-06  Score=81.78  Aligned_cols=152  Identities=7%  Similarity=-0.080  Sum_probs=100.3

Q ss_pred             HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064           25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY  104 (346)
Q Consensus        25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~  104 (346)
                      .+....++.....++.|++ ++|++..+++...........++.++++++.||+ |+++++.....+..++.+.+.+...
T Consensus       213 ~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~  290 (401)
T PRK11043        213 AACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASL  290 (401)
T ss_pred             HHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3444556666677787776 4799998888877777777788888999999996 9988776665555554443333221


Q ss_pred             cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064          105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT  184 (346)
Q Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~  184 (346)
                      .+              ........+...+.+++.+...+...+...|+.+++       +++..+++......++..++.
T Consensus       291 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~g~~~~~~~~~~~~~~~  349 (401)
T PRK11043        291 LS--------------HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQA-------TGKAAALQNTLQLGLCFLASL  349 (401)
T ss_pred             hc--------------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCccc-------ChHHHHHHHHHHHHHHHHHHH
Confidence            11              012344555666788888888888888777777642       355666666656667777777


Q ss_pred             hhhhhhhccchhHHH
Q 019064          185 AIVYVFIDQGWWLGF  199 (346)
Q Consensus       185 ~~~~i~~~~g~~~~f  199 (346)
                      +.+.+.+......++
T Consensus       350 ~~g~l~~~~~~~~~~  364 (401)
T PRK11043        350 LVSALISTPLLTTGS  364 (401)
T ss_pred             HHHHccCCChhHHHH
Confidence            777776644344333

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=98.64  E-value=2.6e-06  Score=81.37  Aligned_cols=122  Identities=6%  Similarity=-0.100  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+..++..++...+++......+.|+.+++|++..+++.......+...++.+++|+++||+ |||+++.++..+..+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~  274 (377)
T PRK11102        196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG  274 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence            34444445555555666666667788888999999999999999999999999999999995 99999988877654432


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD  154 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~  154 (346)
                      +.+......+               ...+...++..+.+.+.+...++......|..+
T Consensus       275 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  317 (377)
T PRK11102        275 IWLVVSALLD---------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP  317 (377)
T ss_pred             HHHHHHHHHh---------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc
Confidence            3222221101               123334444445555555556666666666665

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=98.64  E-value=4.8e-07  Score=86.48  Aligned_cols=176  Identities=13%  Similarity=0.095  Sum_probs=137.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +.+..-++..+.-+=+-.++......|-.+.+|++..+...+...-+..+.++.+++|+|+||+ |-|+++.++.+++.+
T Consensus       252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~  330 (438)
T COG2270         252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI  330 (438)
T ss_pred             cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence            3555556666666666677888889999999999999999998889999999999999999995 999999999888877


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ..+......                   ...-+.+.-.++|+..|+.++..-++.++..|+++      -+.+|+.|...
T Consensus       331 ~~~~~~~~~-------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyalt  385 (438)
T COG2270         331 AALYLIFLE-------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALT  385 (438)
T ss_pred             HHHHHHHcc-------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhh
Confidence            655444331                   11223334457899999999999999999999765      37899999999


Q ss_pred             HHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhc
Q 019064          175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      ...++.+||...+.+.+.. +-+.++..-.+++.+++++++..
T Consensus       386 gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v  428 (438)
T COG2270         386 GRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRV  428 (438)
T ss_pred             hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEee
Confidence            9999999999888776654 46677766666666666665543

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.64  E-value=6.1e-07  Score=88.46  Aligned_cols=139  Identities=15%  Similarity=0.248  Sum_probs=107.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 019064           54 SNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYL  133 (346)
Q Consensus        54 ~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l  133 (346)
                      +.++++|..+..++..++|+++|++ |||++++++.++..++.++..++...                ....++++++++
T Consensus        63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~----------------~~~e~li~GR~i  125 (485)
T KOG0569|consen   63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA----------------PSFEMLILGRLI  125 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh----------------hhHHHHHHHHHH
Confidence            3556788999999999999999996 99999999999988887777766432                256789999999


Q ss_pred             HHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh-hhhhh-hccchhHHHHHHHHHHHHHHH
Q 019064          134 YSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA-IVYVF-IDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       134 ~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~-~~~i~-~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      .|+..|......+-|+.|.-|++-      |+..-.....+.++|.+++..+ ...+- ..-.|.+.+.++.+..++.++
T Consensus       126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~  199 (485)
T KOG0569|consen  126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA  199 (485)
T ss_pred             HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence            999999999999999999988654      4444445566788888888444 33343 445699999888876666655


Q ss_pred             HHHh
Q 019064          212 ALAI  215 (346)
Q Consensus       212 i~~~  215 (346)
                      .+.+
T Consensus       200 ~l~~  203 (485)
T KOG0569|consen  200 LLPF  203 (485)
T ss_pred             HHhc
Confidence            5543

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=98.59  E-value=2.1e-06  Score=82.64  Aligned_cols=165  Identities=8%  Similarity=-0.050  Sum_probs=104.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch---hHHH-HHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF---ATCL-VFGT   90 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~---~~i~-~~~~   90 (346)
                      |..|.+.+..++....+|++..+++.|+++ .|++.. ++.........   +.+..++++||. .|+   +... ....
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~---g~~g~~~~~d~~-~r~~~r~~~~~~~~~  265 (368)
T TIGR00903       192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILA---GLIGVAVIPDRV-ARAGLRSIYIRAAAL  265 (368)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHH---HHHHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence            567888889999999999999999999965 678754 44433333332   334458999985 543   3322 2232


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++..++....                   +.....+.+.+.+++..+..+...++.+|.+|++.      |++..++
T Consensus       266 ~~a~~~~~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~  320 (368)
T TIGR00903       266 LIAAFFLALAFEL-------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGA  320 (368)
T ss_pred             HHHHHHHHHHHcc-------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccch
Confidence            2222222222111                   11223334445556666666778889999998654      6888899


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      .+...++|+.+++.+.+.+..  |....|.+-++..+++.+.
T Consensus       321 ~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~  360 (368)
T TIGR00903       321 IGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAI  360 (368)
T ss_pred             hhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence            999999999888888876663  5555665555555444444

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=98.58  E-value=3.5e-07  Score=86.23  Aligned_cols=118  Identities=18%  Similarity=0.061  Sum_probs=94.7

Q ss_pred             CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHH
Q 019064           47 HFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY  126 (346)
Q Consensus        47 g~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~  126 (346)
                      +.+..-++.+-+.|+..-+++.++.|-+||+| |||.++.++++...+...++..+.                   +...
T Consensus        64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~-------------------~F~a  123 (451)
T KOG2615|consen   64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSR-------------------NFAA  123 (451)
T ss_pred             cccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHH-------------------HHHH
Confidence            33445677888899999999999999999998 999999999888888777766653                   4556


Q ss_pred             HHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064          127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       127 ~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~  191 (346)
                      |.+++++.|+.-|-. ..+.++++|.+++++      +...++....+..+|..+||.+++|+.+
T Consensus       124 fv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~  181 (451)
T KOG2615|consen  124 FVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ  181 (451)
T ss_pred             HHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence            777799988876654 556788999998754      4556666677788999999999999877

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=98.58  E-value=4e-06  Score=81.22  Aligned_cols=157  Identities=10%  Similarity=-0.070  Sum_probs=107.6

Q ss_pred             HHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCC
Q 019064           28 NMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKS  107 (346)
Q Consensus        28 ~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~  107 (346)
                      ...+......++.|+++.+|.+..+++.+.........++.++.+++.|++ ++++.+..+..+ .++..++...     
T Consensus       218 ~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~-----  290 (393)
T PRK11195        218 WGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ-----  290 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH-----
Confidence            344455556667788888999999999999999999999999999999985 888877766432 2222222211     


Q ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064          108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV  187 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~  187 (346)
                                    .+.+...+.+.+.+++.+...++..+...+.-+++.     .+++.++..+...++|..++..+.+
T Consensus       291 --------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~~  351 (393)
T PRK11195        291 --------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLYS  351 (393)
T ss_pred             --------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHHH
Confidence                          124445566777888888888888887765433211     1466777788889999999888877


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHH
Q 019064          188 YVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       188 ~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      .+ +.+|-+..+.+.++..++...
T Consensus       352 ~~-~~~~~~~~~~~~~~~~~~~~~  374 (393)
T PRK11195        352 LL-VKLGVPVVAVIVGFGLLVALA  374 (393)
T ss_pred             HH-HHcCCCHHHHHHHHHHHHHHH
Confidence            55 456666666655544444443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.58  E-value=4.5e-06  Score=81.78  Aligned_cols=212  Identities=17%  Similarity=0.102  Sum_probs=140.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHH-HHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATC-LVFGTL   91 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i-~~~~~l   91 (346)
                      .-.---...+..++.+--+..++..|.++..|++...++.+..+--+.-.+.-|+.|+++||.   +||+|-. +++.+.
T Consensus        13 eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip   92 (467)
T COG2211          13 EKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIP   92 (467)
T ss_pred             HHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHH
Confidence            333334456677788888889999999999999999999999999999999999999999974   5876654 445566


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..+...++..+   |...          .+......++.-.+.+++...+.....++.++..++  ++|   |.+..+|-
T Consensus        93 ~~i~~~l~F~~---p~~~----------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~~E---R~~l~s~R  154 (467)
T COG2211          93 FAIVAVLLFIT---PDFS----------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD--PQE---RASLTSWR  154 (467)
T ss_pred             HHHHHHHHHcC---CCcc----------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC--HHH---HHHHHHHH
Confidence            66665555543   3221          123455556667788899999999999999998775  454   67888898


Q ss_pred             HHHHHHHHHHHHhhhhhhhhc-------cchhHHHHHHHHHHHHHHHHHH-hcCccceecCCCCC-cchhHHHHHHHHHH
Q 019064          172 LFATTLAAMIGVTAIVYVFID-------QGWWLGFLISSVATLIGLIALA-IGKPFYRIQQPGES-PLVRVAQVIVVAIK  242 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~~-------~g~~~~f~i~~~~~~~~~~i~~-~~~~~~~~~~p~gs-~l~~i~~v~~~a~~  242 (346)
                      .+..++|.++...+.+.+...       .||+..-.+.+++..++.+.-+ -.++++.+..|..+ ...+..+.+..-.|
T Consensus       155 ~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~  234 (467)
T COG2211         155 MVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFK  234 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHc
Confidence            889999988776665554332       3555444444433333333222 22333332233222 33445545555556


Q ss_pred             hcc
Q 019064          243 NRK  245 (346)
Q Consensus       243 ~~~  245 (346)
                      ||.
T Consensus       235 Nrp  237 (467)
T COG2211         235 NRP  237 (467)
T ss_pred             cch
Confidence            653

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=98.57  E-value=2e-06  Score=84.01  Aligned_cols=166  Identities=7%  Similarity=-0.068  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccc-cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNE-MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~-lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      ..+..++..++--.+..++.++++.|+.+. .+.+...++.....+.+...++.+++|+++||+ +++|.+.++..+..+
T Consensus       233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~  311 (410)
T TIGR00885       233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA  311 (410)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence            344445555555555557778899998653 355555556666666678889999999999995 999988877777666


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      ..+++...   +                .. .....+.+++++.+++.|.+.+...+.++++..     ..+..  .-. 
T Consensus       312 ~~ll~~~~---~----------------~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~-----~~s~~--l~~-  363 (410)
T TIGR00885       312 LCLGSIFA---G----------------GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTK-----YGAAG--LVM-  363 (410)
T ss_pred             HHHHHHHc---C----------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhHHH--HHH-
Confidence            65555442   1                11 224666778888999999999999999985431     11111  222 


Q ss_pred             HHHHHHHHHhhhhhhhhcc------chhHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQ------GWWLGFLISSVATLIGL  210 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~------g~~~~f~i~~~~~~~~~  210 (346)
                      .-+|+++.|.+.+++.|+.      +.+.+|.+|.++.+...
T Consensus       364 ~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  405 (410)
T TIGR00885       364 AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVIF  405 (410)
T ss_pred             HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHHH
Confidence            3399999999999999954      58889999887765443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.55  E-value=3.9e-06  Score=78.86  Aligned_cols=173  Identities=10%  Similarity=0.038  Sum_probs=139.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      --+.-++++.+=-|-+.-++ ..+..-+++++|+|.++++.+.+.-..+.....++..+++.|+ |-.+++..++++..+
T Consensus        12 ~li~gIvlia~NLR~~itsv-gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~   89 (395)
T COG2807          12 LLLAGIVLIAFNLRPAITSV-GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAA   89 (395)
T ss_pred             HHHHHHHHHHhccchhhhhh-hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHH
Confidence            34444444555557777655 4455678889999999999999998888889999999999995 999999999999999


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      |.++=...                    +...++.+-.+.+.|.+..+..++..+-+-|+++.       ......|-.+
T Consensus        90 G~~iR~~~--------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~-------~~mtglYs~s  142 (395)
T COG2807          90 GILIRSLG--------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV-------GLMTGLYSTS  142 (395)
T ss_pred             HHHHHhcc--------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------hhHHhHHHHH
Confidence            86654432                    35678899999999999999999999999998653       4566677779


Q ss_pred             HHHHHHHHHhhhhhhhhcc-chhHHHHHHHHHHHHHHHHHHhc
Q 019064          175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      .++|+.+++.+++.+.++. ||+.+..+=+...++++++.+--
T Consensus       143 l~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq  185 (395)
T COG2807         143 LGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQ  185 (395)
T ss_pred             HHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999999999998888876 79999888777777777776655

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=98.55  E-value=6.8e-06  Score=79.15  Aligned_cols=71  Identities=10%  Similarity=0.077  Sum_probs=57.4

Q ss_pred             HHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064           31 FIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ  102 (346)
Q Consensus        31 ~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~  102 (346)
                      ........+.|+.+++|++..+.+...........++.++.|+++||+ ||++.+.++..+..++.+++.+.
T Consensus       219 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~  289 (392)
T PRK10473        219 ILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS  289 (392)
T ss_pred             HHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence            333444556677788999998888888888888889999999999995 99999999988888877766654

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=98.54  E-value=6.4e-06  Score=77.45  Aligned_cols=161  Identities=14%  Similarity=0.063  Sum_probs=125.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +..|.+.+.--+.++.||.+..++|.++.+ .|+|..+++..++..+.......+++-++++|.-.+|+..+..+..+.+
T Consensus       208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~  286 (395)
T COG2807         208 PLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV  286 (395)
T ss_pred             chhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence            557888888888999999999999999985 6999999999999999999999999999999877788888888888889


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      |.+-+.+.   |.               +.+.+.  .+++|+|.|+..|....++.+..++  +++..+.+.+-   .-.
T Consensus       287 G~~G~~~~---P~---------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~--a~~Aa~LSgma---Qg~  341 (395)
T COG2807         287 GLVGLLLA---PG---------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSD--AAIAAALSGMA---QGV  341 (395)
T ss_pred             HHHHHHHh---hh---------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCC--hHHHHHHHHHh---hhh
Confidence            88777754   32               222222  5789999999999999999998875  44433333332   223


Q ss_pred             HHHHHHHHHhhhhhhhhcc-chhHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQ-GWWLGFLI  201 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~-g~~~~f~i  201 (346)
                      .++=+.+||.+.+++.|.. +|......
T Consensus       342 GYllAa~GP~l~G~lhDa~gsw~~~~~~  369 (395)
T COG2807         342 GYLLAAFGPWLFGFLHDATGSWSAPLVL  369 (395)
T ss_pred             hHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence            4444566788999998875 46655443

>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]

Probab=98.52  E-value=9.3e-07  Score=88.44  Aligned_cols=178  Identities=15%  Similarity=0.161  Sum_probs=138.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +.++.+.+...+-.++|+--...++.|.. ..|++..+++.+++...+...++-++.|+++|+. ..++..+....+...
T Consensus       298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~  375 (509)
T KOG2504|consen  298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA  375 (509)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence            56777778888889999888889999998 7899999999999999999999999999999986 533333333333333


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      |...+..    |-             ....+.+..--.+.|+..|.+.+.......|..+.++      .++.+.+....
T Consensus       376 gl~~~~~----p~-------------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l~~  432 (509)
T KOG2504|consen  376 GLARLFL----PF-------------ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLLLF  432 (509)
T ss_pred             HHHHHHH----HH-------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHHHH
Confidence            3333222    11             1245667777778888888888888778888887543      67888899999


Q ss_pred             HHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHHHhcC
Q 019064          175 TTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      ..+++++++.+.+++.|..| |...|..++++++++.+..+...
T Consensus       433 ~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  433 QGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             hHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence            99999999999999988877 99999999888888876665544

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=98.50  E-value=6e-07  Score=86.49  Aligned_cols=142  Identities=11%  Similarity=0.088  Sum_probs=99.7

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHH
Q 019064           48 FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYF  127 (346)
Q Consensus        48 ~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~  127 (346)
                      +++...+.+..+-.+...+++++.||++|++ |||+++...+++..++.++..++    .-.++        +..-+..+
T Consensus        81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s----~~~~~--------~~~~m~~L  147 (538)
T KOG0252|consen   81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLS----VGTTS--------PLGVMMTL  147 (538)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccC----CCCCC--------CcchhhHH
Confidence            6666777778888889999999999999996 99999999999998888744432    21111        12356788


Q ss_pred             HHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc-----------cchh
Q 019064          128 YGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID-----------QGWW  196 (346)
Q Consensus       128 ~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~-----------~g~~  196 (346)
                      ..-++++|+|.||=.|+..+...|+-.++.++.  ..+.+|...-|.+-.|+.++.++..-....           .=||
T Consensus       148 ~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa--~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWR  225 (538)
T KOG0252|consen  148 CFFRFLLGIGIGGDYPLSATIMSESANKKTRGA--FIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWR  225 (538)
T ss_pred             HHHHHHhhccccCCCcchHHHhhhhhhhccccc--eeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHH
Confidence            889999999999999999998888876554221  123445555555666666655444332211           2388


Q ss_pred             HHHHHHHH
Q 019064          197 LGFLISSV  204 (346)
Q Consensus       197 ~~f~i~~~  204 (346)
                      ..|++.++
T Consensus       226 l~~glg~v  233 (538)
T KOG0252|consen  226 IIFGLGAV  233 (538)
T ss_pred             HHHHHHHH
Confidence            88876554

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=98.42  E-value=5e-09  Score=102.80  Aligned_cols=134  Identities=15%  Similarity=0.236  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHH
Q 019064           52 GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSL  131 (346)
Q Consensus        52 ~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l  131 (346)
                      ..++..+.+..+..++.+++|+++||+ |||+++.++.++..+|.++..++..   .             .+.+.+.+++
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~---~-------------~~~~~~~~~R  109 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPS---Y-------------NNFWMLLIGR  109 (451)
T ss_pred             HHHHHHHHHHhhhcccccccccccccc-ccccccccccccccccccccccccc---c-------------cccccccccc
Confidence            456777888999999999999999996 9999999999999999877666531   0             1457789999


Q ss_pred             HHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhh---ccchhHHHHHHHHHHHH
Q 019064          132 YLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFI---DQGWWLGFLISSVATLI  208 (346)
Q Consensus       132 ~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~---~~g~~~~f~i~~~~~~~  208 (346)
                      ++.|+|.|+..+....+..|..+++.      |+....+......+|.+++..+...+..   +.+|+..+.++.+..++
T Consensus       110 ~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~  183 (451)
T PF00083_consen  110 FLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLL  183 (451)
T ss_pred             cccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999998654      4556666666777887777665443322   34599888776655443

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=98.41  E-value=2.8e-06  Score=80.64  Aligned_cols=140  Identities=15%  Similarity=0.046  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLS   95 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G   95 (346)
                      ..+.+.+..++....++++...++.|+++.+|++..+++.....+.....++.+++|+++||+ ||++.+..+..+...+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~  304 (366)
T TIGR00886       226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG  304 (366)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence            345555556666667778888999999999999999999888888888899999999999996 9988887777666666


Q ss_pred             HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHH
Q 019064           96 LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFAT  175 (346)
Q Consensus        96 ~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~  175 (346)
                      ..++.+..  +.             ..+...+...+.+.+++.|...+...+..+|.++++       ++...+......
T Consensus       305 ~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------~g~~~g~~~~~~  362 (366)
T TIGR00886       305 AFLVVLGL--VS-------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRA-------TGAVSGLVGAIG  362 (366)
T ss_pred             HHHHHhcC--CC-------------cchHHHHHHHHHHHHHHhccccchhhhcchhhchhh-------cccHHHHHHHhc
Confidence            55554421  10             003444555555666666666666667777776521       355555544445


Q ss_pred             HHH
Q 019064          176 TLA  178 (346)
Q Consensus       176 niG  178 (346)
                      ++|
T Consensus       363 ~~g  365 (366)
T TIGR00886       363 NLG  365 (366)
T ss_pred             cCC
Confidence            544

>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=98.40  E-value=1.4e-05  Score=78.97  Aligned_cols=185  Identities=16%  Similarity=0.081  Sum_probs=112.9

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      +..++....++...++..+.-.-......+.+-..-|++..++..+.........++.+++.++-||+ |||+.++++..
T Consensus       265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~  343 (485)
T KOG0569|consen  265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLS  343 (485)
T ss_pred             cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHH
Confidence            34456677777777777765444444444445456799999999999999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcc-ccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCG-GNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g-~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      +..+..+++++...+....          ..+-....+++.++..++.+ |.-|...-+.+|.++...      |...+.
T Consensus       344 ~~~~~~~~~~~~~~l~~~~----------~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s  407 (485)
T KOG0569|consen  344 LMAVALLLMSIALFLSNSF----------GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQS  407 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHH
Confidence            9888777777654322110          00111122344444333333 334556667789999765      444444


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          170 FYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      +-+....+..++-......+++..|- ..|.+..+..++..+..
T Consensus       408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~  450 (485)
T KOG0569|consen  408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYL  450 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHH
Confidence            44444444444444445566666664 33443333333333333

>PRK11462 putative transporter; Provisional

Probab=98.38  E-value=1.8e-05  Score=78.49  Aligned_cols=158  Identities=11%  Similarity=0.049  Sum_probs=93.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |....++...++..++..........|.+..+|... ..+.+...+.....++.+++++++||+ |||+++..+..+..+
T Consensus       228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~  305 (460)
T PRK11462        228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAV  305 (460)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence            344555556666666665555555555555555433 334455666777788889999999996 988887655544433


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh-hhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL-ASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~-~~~f~~~y~  173 (346)
                      ..+++.+.   |.              .+...+++..++.+++.++..+...++.+|..+.++-+..+++ +.+++.+-+
T Consensus       306 ~~~~~~~~---~~--------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f  368 (460)
T PRK11462        306 ISLAMFFV---PM--------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLF  368 (460)
T ss_pred             HHHHHHHh---ch--------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHH
Confidence            32222221   21              1222334445566777777777777888888774321111112 344666667


Q ss_pred             HHHHHHHHHHhhhhhhhh
Q 019064          174 ATTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~  191 (346)
                      ...+|..++..+.+++-+
T Consensus       369 ~~Klg~alg~~i~g~iL~  386 (460)
T PRK11462        369 VLKLGLAFGGALIGWMLA  386 (460)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            788888888777666543

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=98.33  E-value=1.3e-05  Score=79.70  Aligned_cols=187  Identities=10%  Similarity=-0.011  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhH----HHHHHHHHHHHHHHHHHH----HHHHhhhcccchhH--HH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAG----ASNTLTNFFGSTFLLCLV----GGFISDTYLSRFAT--CL   86 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~----a~~~~~~~~~~~~~~~ll----gG~laD~~lGR~~~--i~   86 (346)
                      ...+++...+-...|.-..+.++.|..+.++.+...    .+.+.+.-.....+..++    ...+.||..+.+..  +.
T Consensus       274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~  353 (475)
T TIGR00924       274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT  353 (475)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence            344444445555666666677888877655443211    334444333333333333    23556652232332  36


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      +++++..+++..+.+.....  ..        ....+.+++.+..++.++|+....|...++..++.|++.      |+.
T Consensus       354 ~G~~l~~~~~~~~~~~~~~~--~~--------~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~  417 (475)
T TIGR00924       354 LGMLFCGASFLTFAASIWFA--DA--------GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQ  417 (475)
T ss_pred             HHHHHHHHHHHHHHHHHhhc--CC--------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHH
Confidence            78888888877776542111  00        012467889999999999999999999999999988543      688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064          167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPF  219 (346)
Q Consensus       167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~  219 (346)
                      .++.++.+..+|..++..+.....+..+|...|...++.+++..++++...++
T Consensus       418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  470 (475)
T TIGR00924       418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW  470 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888899999999998888777666678878877777666666665554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=98.32  E-value=5.3e-05  Score=72.97  Aligned_cols=141  Identities=9%  Similarity=-0.044  Sum_probs=90.0

Q ss_pred             HHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019064           35 GISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCG  114 (346)
Q Consensus        35 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~  114 (346)
                      ....+.|+++.+|++..+.+...........++.++.+++.||+ ||.  ...+.....++.+++.......        
T Consensus       227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~--------  295 (394)
T PRK11652        227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STL--MWQSVICCLLAGLLMWIPGWFG--------  295 (394)
T ss_pred             HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHHHHHHhc--------
Confidence            34456677777999998888877766667777777888888875 632  2223223333322222211100        


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064          115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g  194 (346)
                            ....+.+.++..+.++|.+...|...+...|.++++       ++..........++|+.+++.+.+++.++..
T Consensus       296 ------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  362 (394)
T PRK11652        296 ------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSGLAALLSAMLPQTGQ  362 (394)
T ss_pred             ------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence                  113455666778888999999999999888887632       2344455555678999999988888876544


Q ss_pred             hhHHH
Q 019064          195 WWLGF  199 (346)
Q Consensus       195 ~~~~f  199 (346)
                      +....
T Consensus       363 ~~~~~  367 (394)
T PRK11652        363 FSLGL  367 (394)
T ss_pred             HHHHH
Confidence            44333

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=98.29  E-value=3.2e-05  Score=75.92  Aligned_cols=157  Identities=13%  Similarity=0.050  Sum_probs=119.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |....+++..++...++.-..+.++.|.+..+|.+...+............++.++.-.+++++ ||+++..++.++..+
T Consensus       236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i  314 (467)
T COG2211         236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV  314 (467)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence            4555666677777777766667778888888999888888887777777777789999999995 999999999999999


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh-hhhhHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK-ALASYFNFYLF  173 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~-~~~~~f~~~y~  173 (346)
                      +.+++.+..                 ..+.++.++...+.++|.+...+...++.+|..|.++-+.-. .-+-.++.+-+
T Consensus       315 ~~~~~~f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF  377 (467)
T COG2211         315 GYLLLYFTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTF  377 (467)
T ss_pred             HHHHHHhhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHH
Confidence            998888763                 125678888889999999999999999999998743322111 12445555556


Q ss_pred             HHHHHHHHHHhhhhhh
Q 019064          174 ATTLAAMIGVTAIVYV  189 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i  189 (346)
                      ..=+|.+++..+.+++
T Consensus       378 ~~K~g~ala~~~~g~~  393 (467)
T COG2211         378 FRKLGLALAGFIPGWI  393 (467)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            6667777776665554

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=98.27  E-value=1.1e-05  Score=78.03  Aligned_cols=177  Identities=13%  Similarity=0.015  Sum_probs=100.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH--
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE--   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~--   92 (346)
                      +..|..-...+.--+++-...+.++.+++++.|++..+.+.+.++-.....+.+|+.|.++||. |.||.++....+.  
T Consensus         7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~   85 (412)
T PF01306_consen    7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL   85 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence            4555555566666666656668899999998999999999999999999999999999999995 8666554433322  


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      ..|-....+-.  |.++            .+   +.++..+.++..+.......+.. |.+.++-++   +..-=|+---
T Consensus        86 l~~pff~~v~~--pll~------------~n---~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~sr---~~~feYG~~R  144 (412)
T PF01306_consen   86 LFGPFFIYVFG--PLLQ------------SN---FWLGAIIGGIYLGLVFNAGVPLS-EAYAERVSR---RNGFEYGRAR  144 (412)
T ss_dssp             TCHHHHHHTHH--HHHH------------TT----HHHHHHTTTTTTTTTTTHHHHH-HHHHHHHHH---HHSS-HHHHH
T ss_pred             HHHHHHHHHHH--HHHH------------HH---HHHHHHHHHHHHHHHHcccchHH-HHHHHHHHH---HhcCCcchHH
Confidence            22333322211  2211            01   23333343444444443333322 555432211   1111122223


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .-..+|.+++..+++++.+ .+-...|++..++.++..++.+
T Consensus       145 ~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~  185 (412)
T PF01306_consen  145 MWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLL  185 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHH
Confidence            3477888888888888876 4445667765544333333333

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=98.23  E-value=7.2e-05  Score=72.83  Aligned_cols=112  Identities=14%  Similarity=0.074  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064           23 LSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ  102 (346)
Q Consensus        23 ~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~  102 (346)
                      ..+++-+++-...+.+++|+++ .|++..+.+.+.++......+.|++.|+++||+..++|.+.+..++..+...+....
T Consensus        10 ~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~   88 (400)
T PF03825_consen   10 MYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS   88 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444445554555788899985 689999999999999999999999999999997556777766555554443332221


Q ss_pred             hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064          103 AYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD  154 (346)
Q Consensus       103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~  154 (346)
                      .                   +.+.++..+.+..+......|...+..-+...
T Consensus        89 ~-------------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~  121 (400)
T PF03825_consen   89 S-------------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG  121 (400)
T ss_pred             c-------------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence            1                   24445555666666666666655555544444

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=98.14  E-value=4.5e-05  Score=75.06  Aligned_cols=156  Identities=17%  Similarity=0.136  Sum_probs=109.9

Q ss_pred             HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc--cc--chhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY--LS--RFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~--lG--R~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      ....|+++++|+++++......... .-...-++.|.++|.+  .|  ||+=++++.++..++...+.+.   |...   
T Consensus        11 ~~~~~l~~~l~ls~~~~~~~~~~~~-lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~~~---   83 (433)
T PF03092_consen   11 AIYPFLKDDLGLSPAQLQRLSSLAS-LPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PASE---   83 (433)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHh-CchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cccc---
Confidence            3456788899999988776555433 4445566789999997  24  5556666777776655555543   2211   


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~  192 (346)
                               .......+.+++..+|.+......-+...|...++...    ++..-++.|....+|++++..+.+++.+.
T Consensus        84 ---------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l~~~  150 (433)
T PF03092_consen   84 ---------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPLLDS  150 (433)
T ss_pred             ---------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhhhhc
Confidence                     12344556667788999988888888888887655422    46667788889999999999999999998


Q ss_pred             cchhHHHHHHHHHHHHHHHH
Q 019064          193 QGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       193 ~g~~~~f~i~~~~~~~~~~i  212 (346)
                      .+++..|.+.+++..+..+.
T Consensus       151 ~~~~~~f~i~~~~~~l~~~~  170 (433)
T PF03092_consen  151 FGPQGVFLISAALPLLMLIV  170 (433)
T ss_pred             CCCeEEehHHHHHHHHHHHH
Confidence            89998898876655544433

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=98.13  E-value=6.9e-05  Score=74.10  Aligned_cols=177  Identities=19%  Similarity=0.085  Sum_probs=121.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhH---HHHHHHcccccCCchhHHH-HHHHHH----HHHHHHHHHHHHHHhhhcccchhHHH
Q 019064           15 RACTFVFVLSALENMGFIANG---ISMVLYFKNEMHFDIAGAS-NTLTNF----FGSTFLLCLVGGFISDTYLSRFATCL   86 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~---~~l~~yl~~~lg~s~~~a~-~~~~~~----~~~~~~~~llgG~laD~~lGR~~~i~   86 (346)
                      ....-+....+.+.++++...   .+...+.....+.+..... ......    .....+..++-|.++|+| |||..+.
T Consensus        18 ~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~   96 (463)
T KOG2816|consen   18 ASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLL   96 (463)
T ss_pred             chhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHH
Confidence            344556666777777776666   5555666555554433332 222222    356777888899999997 9999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      +..+...++.+.+.+..                     +++++ +.-..-|.+.+.+...++++|...+++      |..
T Consensus        97 ~~~~~~~l~~~~~~~~~---------------------~~~~~-~~~l~g~~~~~~s~~~a~vadis~~~~------R~~  148 (463)
T KOG2816|consen   97 LPLFGTILPALCLLFQG---------------------YWFFL-LLGLSGGFSAIFSVGFAYVADISSEEE------RSS  148 (463)
T ss_pred             HHHHHHHHhHHHHHHHH---------------------HHHhh-hcccccchhhhhhhhhhheeeccchhH------HHH
Confidence            88888877766655532                     22322 222333444566777788888887543      566


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064          167 YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFY  220 (346)
Q Consensus       167 ~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~  220 (346)
                      .+...+-+...+..+++..++++.+..|....|.+.++..+++.+...+..+.-
T Consensus       149 ~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Es  202 (463)
T KOG2816|consen  149 SIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPES  202 (463)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccc
Confidence            677777777788888999999999999999999999888887777666655543

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=98.11  E-value=0.00022  Score=69.59  Aligned_cols=168  Identities=11%  Similarity=0.035  Sum_probs=100.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.++...+...+....+++....+|.|+++.+|++..+.+.......+...++..+.+.+.++. ++++.+.....+..+
T Consensus       218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i  296 (413)
T PRK15403        218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV  296 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence            4456566666677777777778889999999999999998887666666666666666555443 444554444445555


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      |.+++.+.....              .......++++.+.++|.+...|+.....-.+.+... +   ..++.+   ...
T Consensus       297 g~~l~~~~~~~~--------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~-G---~a~a~~---~~~  355 (413)
T PRK15403        297 GLALLIVGNLLW--------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPK-G---TVSASL---NMV  355 (413)
T ss_pred             HHHHHHHHHHHc--------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCC-c---HHHHHH---HHH
Confidence            655544332100              0123345678888899999998888864434433221 1   123333   333


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVA  205 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~  205 (346)
                      ...+..++..+.+++.++ +-.++|....++
T Consensus       356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~  385 (413)
T PRK15403        356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV  385 (413)
T ss_pred             HHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence            444455566666676554 445566544433

>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]

Probab=98.02  E-value=8.1e-05  Score=73.30  Aligned_cols=184  Identities=14%  Similarity=0.081  Sum_probs=128.6

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc-hhHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLV   87 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR-~~~i~~   87 (346)
                      ++-+||.+++.+++.+...+.++-....+=.|+++ +.+-+..-.++++.....+..+..++.|+...|. |+ |+-++.
T Consensus        29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~  107 (488)
T KOG2325|consen   29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIV  107 (488)
T ss_pred             cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHH
Confidence            45789999999999999999888888888888875 4667777788999999999999999999999996 74 667778


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhH
Q 019064           88 FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASY  167 (346)
Q Consensus        88 ~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~  167 (346)
                      ++++..+|.++....+..|.              ...+++++++++.|+|.|.. +..-++.+|--..+|      |.+.
T Consensus       108 s~ii~~~g~llY~~l~~~~~--------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R~rA  166 (488)
T KOG2325|consen  108 SFLIAIIGNLLYLALAYVPN--------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------RPRA  166 (488)
T ss_pred             HHHHHHHHHHHHHHHHhccc--------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------hHHH
Confidence            99999999988844444443              15688899999999997654 667788888655444      3333


Q ss_pred             HHHH----HHHHHHHHHHHHhhhhhhhhcc---------chhHHHHHHHHHHHHHHHHHHh
Q 019064          168 FNFY----LFATTLAAMIGVTAIVYVFIDQ---------GWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       168 f~~~----y~~~niG~~i~~~~~~~i~~~~---------g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +...    -.+..+|..+++..++..++.+         -+..+-++.+++.++.++++.+
T Consensus       167 ~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~  227 (488)
T KOG2325|consen  167 FAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILF  227 (488)
T ss_pred             HHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHh
Confidence            4333    3344455555554555444321         1333444455555555544443

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.00  E-value=0.0001  Score=75.69  Aligned_cols=201  Identities=13%  Similarity=0.158  Sum_probs=145.8

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      ...+.+..++....+....+.+......+-+.+.++++..+.+.+...+-+...++.++..+.+-|. =|-|.|-+++++
T Consensus        93 ~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~  171 (735)
T KOG3626|consen   93 ANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVL  171 (735)
T ss_pred             cCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhH
Confidence            3456666666666666666668888888999999999999999999999999999999999999984 677788889999


Q ss_pred             HHHHHHHHHhhhccCC-------------CCC-------------CCCCC--CCCC--C--ch-hHHHHHHHHHHHHHhc
Q 019064           92 EVLSLVMLTIQAYSKS-------------LHP-------------PDCGK--SSCL--K--GA-IAAYFYGSLYLYSLGC  138 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~-------------~~~-------------~~~~~--~~~~--~--~~-~~~~~~~~l~l~~iG~  138 (346)
                      ..+|.+++++-.++..             -.+             ..|..  ++|.  .  +. -..+++++.++.|+|.
T Consensus       172 m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~  251 (735)
T KOG3626|consen  172 MGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA  251 (735)
T ss_pred             HHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC
Confidence            9999888876321100             001             11111  1232  1  11 3347888999999999


Q ss_pred             cccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc------------------c-chhHHH
Q 019064          139 GGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID------------------Q-GWWLGF  199 (346)
Q Consensus       139 g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~------------------~-g~~~~f  199 (346)
                      -.+.+.-.+++=|...+++      -..+++..|...-+|.++|.+++++..+-                  + -||.+|
T Consensus       252 Tpi~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGF  325 (735)
T KOG3626|consen  252 TPIFTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGF  325 (735)
T ss_pred             CCCccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHH
Confidence            8888888887766665443      35678888888899999998888765321                  1 399999


Q ss_pred             HHHHHHHHHHHHHHHhcCcc
Q 019064          200 LISSVATLIGLIALAIGKPF  219 (346)
Q Consensus       200 ~i~~~~~~~~~~i~~~~~~~  219 (346)
                      ++++.+.+++.+.++...+.
T Consensus       326 Li~g~~~~~~a~p~f~fPk~  345 (735)
T KOG3626|consen  326 LICGALLLFSAVPLFFFPKE  345 (735)
T ss_pred             HHHHHHHHHHHHHHHhCccc
Confidence            99998887777766654443

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=97.98  E-value=0.00044  Score=62.78  Aligned_cols=106  Identities=9%  Similarity=0.054  Sum_probs=77.7

Q ss_pred             HHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 019064           37 SMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS  116 (346)
Q Consensus        37 ~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~  116 (346)
                      ....-+++.+|+++.|.+.+...-..+.+++ ++.|.+.|++ |.+.++.++.+...+|+.++.+... ....       
T Consensus        23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~-~~i~-------   92 (250)
T PF06813_consen   23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS-GRIP-------   92 (250)
T ss_pred             hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-CccC-------
Confidence            3445677899999999999988888888875 7889999996 9999999999999999999988642 1111       


Q ss_pred             CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCC
Q 019064          117 SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEN  156 (346)
Q Consensus       117 ~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~  156 (346)
                          +...+.+.+...+.+.|.+.+......-..+.||++
T Consensus        93 ----~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~  128 (250)
T PF06813_consen   93 ----SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS  128 (250)
T ss_pred             ----ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc
Confidence                124555555555666666555555445556888853

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=97.96  E-value=0.00061  Score=66.37  Aligned_cols=179  Identities=13%  Similarity=0.021  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      +...++..++...+.-....+...|+++.-|.+....+...+.-.+.=...-.+.+++-.|+ |-++++.++++.+.+=.
T Consensus       209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~  287 (400)
T PF03825_consen  209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW  287 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence            33344444555555555557778898864446666666554444444445555678888885 99999999998888866


Q ss_pred             HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HH
Q 019064           97 VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-AT  175 (346)
Q Consensus        97 ~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~  175 (346)
                      .+....+. |.             ........++..+-|+..|........++.+..|++.      +.+.-+.+.. ..
T Consensus       288 ~l~a~~~~-~~-------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~  347 (400)
T PF03825_consen  288 LLYAYFSD-PW-------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSF  347 (400)
T ss_pred             HHHHHhcC-Cc-------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHh
Confidence            56555420 10             0112233444556899999999999999999998655      3344444333 35


Q ss_pred             HHHHHHHHhhhhhhhhccc------hhHHHHHHHHHHHHHHHHHHhc
Q 019064          176 TLAAMIGVTAIVYVFIDQG------WWLGFLISSVATLIGLIALAIG  216 (346)
Q Consensus       176 niG~~i~~~~~~~i~~~~g------~~~~f~i~~~~~~~~~~i~~~~  216 (346)
                      .+|..+|..+++++.+++|      |...+.+++++.++..+++++.
T Consensus       348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~  394 (400)
T PF03825_consen  348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL  394 (400)
T ss_pred             hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence            7899999999999998765      4445566666666666666554

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=97.95  E-value=0.00054  Score=65.83  Aligned_cols=164  Identities=16%  Similarity=0.161  Sum_probs=121.3

Q ss_pred             HHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCC
Q 019064           28 NMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKS  107 (346)
Q Consensus        28 ~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~  107 (346)
                      .++|+.==..|=+|--+.+|++..+.+.....|.+...++-.+.|++..+..+++++..+++.+..+++.++.+++..  
T Consensus       221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~--  298 (403)
T PF03209_consen  221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPL--  298 (403)
T ss_pred             HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhc--
Confidence            334433333344555567899999999999999999999999999999988899999999999999998888887632  


Q ss_pred             CCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064          108 LHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV  187 (346)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~  187 (346)
                                    .+.+.|..+++++|+|.|.+.....+...|...++.      .+.+...|-.+..++..++..+++
T Consensus       299 --------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~~~GG  358 (403)
T PF03209_consen  299 --------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGTFLGG  358 (403)
T ss_pred             --------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence                          246789999999999999988888888888887554      245566665555555555555554


Q ss_pred             hhhh----------ccchhHHHHHHHHHHHHHHHHH
Q 019064          188 YVFI----------DQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       188 ~i~~----------~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      -+.|          ..+|...|.+-++.+++++.+.
T Consensus       359 ~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll  394 (403)
T PF03209_consen  359 ALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL  394 (403)
T ss_pred             HHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            4433          2357777887777777666554

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]

Probab=97.93  E-value=6.9e-05  Score=74.64  Aligned_cols=86  Identities=15%  Similarity=0.105  Sum_probs=70.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCLVFGTL   91 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i~~~~~l   91 (346)
                      +.+|...+..++.....|++..+++.|+++..|++..++..+...+.+...++.++.|+++||.   ..++..+..+..+
T Consensus       273 p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~  352 (495)
T KOG2533|consen  273 PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL  352 (495)
T ss_pred             hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            4568888899999999999999999999997789999999999999999999999999999993   3556555555555


Q ss_pred             HH-HHHHHHH
Q 019064           92 EV-LSLVMLT  100 (346)
Q Consensus        92 ~~-~G~~ll~  100 (346)
                      +. +|.+.+.
T Consensus       353 ~~~~g~~~l~  362 (495)
T KOG2533|consen  353 YAIIGAISLL  362 (495)
T ss_pred             HHHHHHHHHH
Confidence            43 4544444

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=97.92  E-value=0.00033  Score=67.78  Aligned_cols=134  Identities=10%  Similarity=-0.009  Sum_probs=86.5

Q ss_pred             HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064           38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS  117 (346)
Q Consensus        38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~  117 (346)
                      ..+|.++.+| +...+.+...+|+..+......+-|+.|++ |=|.+.++++++..+|..+=.++. .|...+       
T Consensus        67 i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~~-------  136 (480)
T KOG2563|consen   67 INNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVPP-------  136 (480)
T ss_pred             HHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Cccccc-------
Confidence            4455556667 666677888889999999999999999996 999999999999999988777654 354322       


Q ss_pred             CCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064          118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF  190 (346)
Q Consensus       118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~  190 (346)
                         .....+.+.|-.+.+..+-.+...-+-..+-.|++++      |...-..-.++..+|.+++.++.+.+.
T Consensus       137 ---~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppilV  200 (480)
T KOG2563|consen  137 ---LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPILV  200 (480)
T ss_pred             ---cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhccceec
Confidence               1111355566666666655444333333445566443      333333333455566666665555543

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=97.92  E-value=0.00015  Score=72.50  Aligned_cols=178  Identities=11%  Similarity=-0.026  Sum_probs=108.8

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchh----HHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-------HHHHHHHHH
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIA----GASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------TCLVFGTLE   92 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~----~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-------~i~~~~~l~   92 (346)
                      ...-...|......++.|.++..+.+..    .++.+.+.......+..++.|++.||+ |||+       -+.++.++.
T Consensus       278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~  356 (489)
T PRK10207        278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC  356 (489)
T ss_pred             HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence            4444555666667788888753332211    122333333344545666678999995 8886       367788887


Q ss_pred             HHHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           93 VLSLVMLTIQAY-SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        93 ~~G~~ll~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      .+|++.+.+... .....          ...+.+++....++.++|++...|...++..+..|++.      ++.....+
T Consensus       357 ~~~~~~~~~~~~~~~~~~----------~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~~  420 (489)
T PRK10207        357 SLGFLTAAAAGMWFADAQ----------GLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGMW  420 (489)
T ss_pred             HHHHHHHHHHHHhhcCCC----------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHHH
Confidence            777765543211 11100          12345667788889999999999999999999887433      56677778


Q ss_pred             HHHHHHHHHHHHhhhhhhhh----------ccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          172 LFATTLAAMIGVTAIVYVFI----------DQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~----------~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      +...++|..++..+..+...          .-.+.+.|...++..++..++++...+
T Consensus       421 ~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~  477 (489)
T PRK10207        421 FLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP  477 (489)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888999988777654421          112445566555554444444444333

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=97.91  E-value=0.00034  Score=66.24  Aligned_cols=171  Identities=12%  Similarity=0.035  Sum_probs=101.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccc--cCCc---------------hhHHHHH--HHHHHHHHHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNE--MHFD---------------IAGASNT--LTNFFGSTFLLCLVGGFI   74 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~--lg~s---------------~~~a~~~--~~~~~~~~~~~~llgG~l   74 (346)
                      +|....+...-+..+++|||+.-...-..+..  .|..               ...+...  +..-+..-+-+.++.+++
T Consensus       325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i  404 (528)
T KOG0253|consen  325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI  404 (528)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence            45666677778889999999865444333321  1111               1111111  122344566688999999


Q ss_pred             hhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCC
Q 019064           75 SDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD  154 (346)
Q Consensus        75 aD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~  154 (346)
                      .|| +|||+|+..+.+++.+-.+++...-.               +..-..+++.+++.+..    ..-+...|--|.||
T Consensus       405 ver-lGRKkTMal~l~~f~iflfll~~c~~---------------rn~~tvllf~arafisg----~fqvaYvYtPEVyP  464 (528)
T KOG0253|consen  405 VER-LGRKKTMALSLILFGIFLFLLTTCKT---------------RNAYTVLLFTARAFISG----AFQVAYVYTPEVYP  464 (528)
T ss_pred             HHH-hcchhHHHHHHHHHHHHHHHHHHhcC---------------cchhHHHHHHHHHHHhc----hheEEEEecCcccc
Confidence            999 69999999988887776555543210               11233455566665544    44566778889998


Q ss_pred             CCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          155 ENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       155 ~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      ..-      |....+.-.-...||++++|.++  +..+.+-..+..+..++.+++.+.
T Consensus       465 Tav------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIa  514 (528)
T KOG0253|consen  465 TAV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIA  514 (528)
T ss_pred             hhh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHH
Confidence            644      34444444445789999999887  333333334444555544444443

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=97.90  E-value=1.9e-06  Score=86.87  Aligned_cols=191  Identities=14%  Similarity=0.184  Sum_probs=2.9

Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Q 019064           19 FVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVM   98 (346)
Q Consensus        19 ~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~l   98 (346)
                      ++++..+.+ ...+|......+-+.+.++++.++++.+.+.+.+...+..++..+.++|. -|-|-+-+++++..+|.++
T Consensus         7 ~~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l   84 (539)
T PF03137_consen    7 FLCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLL   84 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHH
Confidence            344555556 77888888888889999999999999999999999999999999999984 6777777888899999888


Q ss_pred             HHhhhccCCC---------------CCCCCC--------C--CCCC---C---chhHHHHHHHHHHHHHhccccccchhh
Q 019064           99 LTIQAYSKSL---------------HPPDCG--------K--SSCL---K---GAIAAYFYGSLYLYSLGCGGNRGTLPA  147 (346)
Q Consensus        99 l~l~~~~p~~---------------~~~~~~--------~--~~~~---~---~~~~~~~~~~l~l~~iG~g~~~~~~~a  147 (346)
                      +++-.++..-               ....|.        .  ..|.   .   ..-..+|+++.++.|+|.....+.-.+
T Consensus        85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t  164 (539)
T PF03137_consen   85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT  164 (539)
T ss_dssp             -------------------------------------------------------------------SSS----------
T ss_pred             HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence            8863321110               011230        0  0011   1   123467888999999999988888888


Q ss_pred             hccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc---------------------cc-hhHHHHHHHHH
Q 019064          148 LGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID---------------------QG-WWLGFLISSVA  205 (346)
Q Consensus       148 ~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~---------------------~g-~~~~f~i~~~~  205 (346)
                      |+=|..++++      -.-+.+.+|....+|.++|..+++..-+.                     +| ||++|.+.+++
T Consensus       165 YiDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~  238 (539)
T PF03137_consen  165 YIDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL  238 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             eecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence            8877776544      35677778888888998888777654210                     23 99999998887


Q ss_pred             HHHHHHHHHhcC
Q 019064          206 TLIGLIALAIGK  217 (346)
Q Consensus       206 ~~~~~~i~~~~~  217 (346)
                      .++..+.++...
T Consensus       239 ~~l~aipl~~FP  250 (539)
T PF03137_consen  239 LFLSAIPLFFFP  250 (539)
T ss_dssp             ------------
T ss_pred             HHHHHHHHHcCC
Confidence            766555554433

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.89  E-value=0.00013  Score=53.74  Aligned_cols=66  Identities=14%  Similarity=0.033  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           24 SALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        24 ~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .++...+.-.+.++++.|++ +.|++..+.+.+..+......+++++.|+++||+ ||++.++....+
T Consensus         9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~   74 (77)
T PF12832_consen    9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF   74 (77)
T ss_pred             HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence            33444445556678888887 4899999999999999999999999999999996 988888766554

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=97.84  E-value=0.00079  Score=60.29  Aligned_cols=147  Identities=20%  Similarity=0.203  Sum_probs=98.3

Q ss_pred             HHHHHHcccccCCch--hHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDI--AGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC  113 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~--~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~  113 (346)
                      ..++.+.. .++.+.  ...+.....+.....+..++.|.++|++ |||+.+..+.....++.++..+..   .      
T Consensus        23 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~---~------   91 (338)
T COG0477          23 PALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP---N------   91 (338)
T ss_pred             HHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc---c------
Confidence            34444443 344443  4677788888888888889999999997 999888877766555533433322   1      


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHHhhhhhhhh-
Q 019064          114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVFI-  191 (346)
Q Consensus       114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~niG~~i~~~~~~~i~~-  191 (346)
                              .....+.+.+.+.+++.+...+...++..|.+++ .    ..+....+.... ...+|..+++.+.+.+.. 
T Consensus        92 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (338)
T COG0477          92 --------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPE-A----TERGLAVGLVTLGAGALGLALGPLLAGLLLGA  158 (338)
T ss_pred             --------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCc-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    1356677777778999999999999999999886 2    124555555555 466677777655555443 


Q ss_pred             -ccchhHHHHHHHHHH
Q 019064          192 -DQGWWLGFLISSVAT  206 (346)
Q Consensus       192 -~~g~~~~f~i~~~~~  206 (346)
                       ..+|+..|.+.....
T Consensus       159 ~~~~~~~~~~~~~~~~  174 (338)
T COG0477         159 LLWGWRAAFLLAALLG  174 (338)
T ss_pred             HhcchHHHHHHHHHHH
Confidence             357888666554433

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=97.76  E-value=0.00066  Score=65.91  Aligned_cols=174  Identities=11%  Similarity=0.040  Sum_probs=120.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccC---CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMH---FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg---~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +-|.+|.+.+........|+..-...+.|.+..++   .++...+.+.+.-.+.=.+.-.+..++-+|+ |.|+.++++.
T Consensus       218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag  296 (412)
T PF01306_consen  218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAG  296 (412)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHH
Confidence            45677777776666666676666667888875443   3333344555555555566666778999995 9999999998


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      .+..+=.+...++.                   +.+.+.+.-.+-++-.+..-....-|+++++|++-      ..+.+.
T Consensus       297 ~i~~iRi~~~~~~~-------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~  351 (412)
T PF01306_consen  297 VIMAIRIIGSGFAT-------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYL  351 (412)
T ss_dssp             HHHHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHH
T ss_pred             HHHHHHHHHHhhhc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHH
Confidence            88777555544432                   45667777778888888888888899999999532      233444


Q ss_pred             H-HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          170 F-YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       170 ~-~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      . +.++..+|..+-+.+.+++.|+.|++..|.+.+.+.+...++
T Consensus       352 v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li  395 (412)
T PF01306_consen  352 VGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLI  395 (412)
T ss_dssp             HHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHH
Confidence            4 345778888888899999999999999998766655544443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]

Probab=97.75  E-value=0.0037  Score=59.42  Aligned_cols=184  Identities=12%  Similarity=0.063  Sum_probs=109.2

Q ss_pred             HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGK  115 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~  115 (346)
                      ..+..-+...-|.+..++..+.........++.-..|.++|++ ||+|...+..+...+    ..+.+   ..       
T Consensus        98 s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v----~~~is---~~-------  162 (528)
T KOG0253|consen   98 SLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGV----FGVIS---GA-------  162 (528)
T ss_pred             HHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHH----HHHhh---cC-------
Confidence            3333444445678888888888877778888899999999996 999977655444333    22221   11       


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccch
Q 019064          116 SSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGW  195 (346)
Q Consensus       116 ~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~  195 (346)
                           +.+...+.+-.+++++|.|+ .|...+.-.+-.|..+..    ...... ++  ..+|.++...+.=.+..+.||
T Consensus       163 -----spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~----~~~V~~-~~--waig~v~ea~law~vm~~~gw  229 (528)
T KOG0253|consen  163 -----SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRW----LLTVMS-FF--WAIGQVFEALLAWGVMSNFGW  229 (528)
T ss_pred             -----CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCC----cchhHH-HH--HHHHHHHHHHHHHHHHHhhhH
Confidence                 22456778888999999999 788888888887765421    122222 22  345666665554444566799


Q ss_pred             hHHHHHHH-HHHHHHHHHHHh-cCccceecCCCCCcchhHHHHHHHHHHhccCCCCC
Q 019064          196 WLGFLISS-VATLIGLIALAI-GKPFYRIQQPGESPLVRVAQVIVVAIKNRKLSLPD  250 (346)
Q Consensus       196 ~~~f~i~~-~~~~~~~~i~~~-~~~~~~~~~p~gs~l~~i~~v~~~a~~~~~~~~~~  250 (346)
                      ++-..... -+++.+...++. -.++|.  --+|++-+. ...+....|-.+.+.|.
T Consensus       230 r~~l~~~~~pl~~~a~f~~w~~ESpRf~--~~~G~~~kA-letL~kiArmNg~qlpl  283 (528)
T KOG0253|consen  230 RYLLFTSSTPLMFAARFLVWVYESPRFY--LAKGDDYKA-LETLHKIARMNGKQLPL  283 (528)
T ss_pred             HHHHHHHHhHHHHHHHHHhhcccCcchh--hhcCChHHH-HHHHHHHHHhcCCCCCc
Confidence            88654433 344444444432 223332  234555433 33343444444445554

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=97.74  E-value=0.00085  Score=67.28  Aligned_cols=173  Identities=13%  Similarity=-0.013  Sum_probs=106.9

Q ss_pred             HHHHHHHHHhHHHHHHHccc----c-----cCCchhHHHHHHHHHHHHHHHHHHHH----HHHhhhcccchhHHHHHHHH
Q 019064           25 ALENMGFIANGISMVLYFKN----E-----MHFDIAGASNTLTNFFGSTFLLCLVG----GFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        25 ~~e~~a~ygv~~~l~~yl~~----~-----lg~s~~~a~~~~~~~~~~~~~~~llg----G~laD~~lGR~~~i~~~~~l   91 (346)
                      ++....||.+...++.+++.    .     .|+.. ..+...+.-.+...+..++.    +.+.||+ +..+.+.++.++
T Consensus       282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i-~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l  359 (500)
T PRK09584        282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAV-EPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL  359 (500)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhccccccceEE-CHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence            35556677776766666542    1     12211 12333333333444444555    5555553 566778888999


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      ..+|++++.+....+.-    +      ...+.+++.....+.++|++...|...++..+..|++.      |+..++.+
T Consensus       360 ~~l~f~~l~~~~~~~~~----~------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g~~  423 (500)
T PRK09584        360 CSGAFLVLPLGAKFAND----A------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMGSW  423 (500)
T ss_pred             HHHHHHHHHHHHHhcCC----C------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHHHH
Confidence            99998887765421110    0      12345678888999999999999999999999988433      67888888


Q ss_pred             HHHHHHHHHHHHhhhhhhhh----------ccchhHHHHHHHHHHHHHHHHHHh
Q 019064          172 LFATTLAAMIGVTAIVYVFI----------DQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~----------~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +.+..+|+.++..+..+...          ..++...|...++..++..++++.
T Consensus       424 ~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~  477 (500)
T PRK09584        424 FLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL  477 (500)
T ss_pred             HHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            87877888877666543221          123566776666554444444433

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=97.57  E-value=0.0021  Score=61.55  Aligned_cols=146  Identities=16%  Similarity=0.118  Sum_probs=106.3

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      .+..+++.|+.+..|.+..+++..++.+.+...++-.+|-++-.|+ ...|.+.+.+++..+-.+...+.   +      
T Consensus       254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~---~------  323 (422)
T COG0738         254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALI---G------  323 (422)
T ss_pred             HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHh---c------
Confidence            4557899999988999999999999999999999998888888875 77776665544433322222222   1      


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~  192 (346)
                                + ..-..++.++|+..+.+.|++.+...+.++++++.     ++.+   -....+|+++-|.+.+++.|.
T Consensus       324 ----------g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~-----~s~~---l~maivGGAiiP~l~G~i~d~  384 (422)
T COG0738         324 ----------G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSV-----GSGL---LVMAIVGGAIIPPLQGVIADM  384 (422)
T ss_pred             ----------C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccc-----ccee---eeeheecchHHHHHHHHHHHh
Confidence                      1 23455677899999999999999999999965532     2222   224667888889999999999


Q ss_pred             cchhHHHH-HHHHHHH
Q 019064          193 QGWWLGFL-ISSVATL  207 (346)
Q Consensus       193 ~g~~~~f~-i~~~~~~  207 (346)
                      +|-...+. +|..+.+
T Consensus       385 ~g~~~~~~~~pllc~l  400 (422)
T COG0738         385 FGIQLTFLIVPLLCYL  400 (422)
T ss_pred             hhhHHHHHHHHHHHHH
Confidence            98877766 4544443

>TIGR00788 fbt folate/biopterin transporter

Probab=97.55  E-value=0.00035  Score=69.44  Aligned_cols=135  Identities=12%  Similarity=-0.115  Sum_probs=99.0

Q ss_pred             ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc-
Q 019064           43 KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG-  121 (346)
Q Consensus        43 ~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~-  121 (346)
                      ++.+|+++...+.+.....+...++..+.+.+.+++ +.++++.++.++..++.....+........          .+ 
T Consensus       280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~----------~gi  348 (468)
T TIGR00788       280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA----------FGI  348 (468)
T ss_pred             cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc----------cCC
Confidence            457899999999999888888888888888888874 999999999888888765432211000000          00 


Q ss_pred             hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064          122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g  194 (346)
                      ...+.......+.+++.+........+..+..+++.      .++.+..+....|+|..+++.+++++.+..|
T Consensus       349 ~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g  415 (468)
T TIGR00788       349 SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG  415 (468)
T ss_pred             CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            012233444556777777777888888999888655      4778888888899999999999999988776

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=97.39  E-value=0.0068  Score=58.38  Aligned_cols=138  Identities=14%  Similarity=-0.043  Sum_probs=87.3

Q ss_pred             cccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhccc-----ch-hHHHHHHHHHHHHHHHHHhhhccCCC-CCCCCCCC
Q 019064           44 NEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS-----RF-ATCLVFGTLEVLSLVMLTIQAYSKSL-HPPDCGKS  116 (346)
Q Consensus        44 ~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lG-----R~-~~i~~~~~l~~~G~~ll~l~~~~p~~-~~~~~~~~  116 (346)
                      .+++.+..-.+..+..-... ....+..|+.||++ +     || +=|..+..+...|..+.......-.. ...     
T Consensus         8 vEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~-----   80 (403)
T PF03209_consen    8 VELGVPAWLVALLVALHYLV-APLRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQ-----   80 (403)
T ss_pred             HHhccHHHHHHHHHHHHHHH-HHHHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccc-----
Confidence            35667655555555544433 34567889999996 4     33 33555666666666555543211110 000     


Q ss_pred             CCCC-chhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 019064          117 SCLK-GAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG  194 (346)
Q Consensus       117 ~~~~-~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g  194 (346)
                      ...+ ........++..++|+|.+....+..++.+|..+|++      |.+.....|...-+|.+++.++.+.+-+.++
T Consensus        81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s  153 (403)
T PF03209_consen   81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS  153 (403)
T ss_pred             cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence            0001 1122344555667888888899999999999998754      6777778888888999999888887766655

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]

Probab=97.38  E-value=0.00028  Score=67.34  Aligned_cols=167  Identities=17%  Similarity=0.051  Sum_probs=107.2

Q ss_pred             hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064           34 NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC  113 (346)
Q Consensus        34 v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~  113 (346)
                      +-+.++++..+.+..+.-+.+.......+...++..+.|.++||+ +.-+-.....-+..+|.....+    |.     |
T Consensus       289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~~~~i----P~-----~  358 (464)
T KOG3764|consen  289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVSSGPI----PF-----A  358 (464)
T ss_pred             hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHHhchh----Hh-----h
Confidence            445667777777775554677776667778888999999999997 8333222223333344222111    22     1


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc
Q 019064          114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQ  193 (346)
Q Consensus       114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~  193 (346)
                              ++...+.+-...++++.+.+.+...+..+...+.+..++-..-++.+...-.+..+|.++||++++.+.+..
T Consensus       359 --------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i  430 (464)
T KOG3764|consen  359 --------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI  430 (464)
T ss_pred             --------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence                    134445566666777777777777777777776544321112356666677788899999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          194 GWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       194 g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      |+.|.-.+.++...+...++...+.
T Consensus       431 GF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  431 GFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998876666665555554444443

>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=97.37  E-value=8.8e-06  Score=74.18  Aligned_cols=157  Identities=13%  Similarity=0.210  Sum_probs=117.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ..+..+.++..+...+.|= --..+.+++...++.+.++.+++.++++--..+.+.+|||+.||.+|-|+.-++.+.+..
T Consensus        43 ~m~lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~  121 (459)
T KOG4686|consen   43 FMALVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF  121 (459)
T ss_pred             HHHHHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence            3455566666665555553 224567888888888888888999999888899999999999999998777667777778


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      +|.++++....                .+..|....++++.|+|.-..-.....+....|..++      ..-.|+..-.
T Consensus       122 ~GqliFa~Ggi----------------~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlS  179 (459)
T KOG4686|consen  122 LGQLIFAAGGI----------------SHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLS  179 (459)
T ss_pred             HHHHHHHhchH----------------HHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHH
Confidence            89888876432                2367889999999999987777777778888887654      5666776666


Q ss_pred             HHHHHHHHHHhhhhhhhhcc
Q 019064          174 ATTLAAMIGVTAIVYVFIDQ  193 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~  193 (346)
                      ...+|+..-..+.+++.++.
T Consensus       180 vAR~GstvNf~lm~~ly~~~  199 (459)
T KOG4686|consen  180 VARLGSTVNFLLMPFLYDTM  199 (459)
T ss_pred             HHHhhceeeeeecHHHHHHH
Confidence            66777776666677776653

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=97.36  E-value=0.014  Score=58.11  Aligned_cols=170  Identities=14%  Similarity=0.006  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH-HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH-
Q 019064           55 NTLTNFFGSTFLLCLVGGFISDTYLSRFATCLV-FGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLY-  132 (346)
Q Consensus        55 ~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~-~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~-  132 (346)
                      ...++......+..|+-|-+||.- |+||.++. +..+..+...++....  |+               +. .+...++ 
T Consensus        74 ~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v~--~~---------------~~-~~~~~l~i  134 (477)
T PF11700_consen   74 YANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFVS--PG---------------QW-WLALVLFI  134 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhC--cc---------------hH-HHHHHHHH
Confidence            344555667777888889999975 76665544 4555555555555432  21               22 2222233 


Q ss_pred             HHHHhccccccchhhhccCCCCCCChhhhh---------------------hhhhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 019064          133 LYSLGCGGNRGTLPALGAGQFDENDPKGAK---------------------ALASYFNFYLFATTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       133 l~~iG~g~~~~~~~a~~adq~~~~~~~~~~---------------------~~~~~f~~~y~~~niG~~i~~~~~~~i~~  191 (346)
                      +-.++.++......++.-|..++++. .+.                     .+++.-++-+...++|+++...+.-.+..
T Consensus       135 ia~v~~~~~~vfyna~LP~la~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~  213 (477)
T PF11700_consen  135 IANVGYEASNVFYNAYLPDLARPEPR-VRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVI  213 (477)
T ss_pred             HHHHHHHHHHHHHHHHhHhhcCCChh-hhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33356666667777777777665432 000                     11556666666788888887665433321


Q ss_pred             --------ccchhHHHHHHHHHH-HHHHHHHHhcCccce-ecCCC-CCcchhHHHHHHHHHHhc
Q 019064          192 --------DQGWWLGFLISSVAT-LIGLIALAIGKPFYR-IQQPG-ESPLVRVAQVIVVAIKNR  244 (346)
Q Consensus       192 --------~~g~~~~f~i~~~~~-~~~~~i~~~~~~~~~-~~~p~-gs~l~~i~~v~~~a~~~~  244 (346)
                              ..+.+..+.+.++-. ++++..+...+++.+ +..|. .+.++.-++-++..+|+.
T Consensus       214 ~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~  277 (477)
T PF11700_consen  214 SPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEI  277 (477)
T ss_pred             cCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence                    123466676666543 344445555554433 22232 334455555555566553

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=97.36  E-value=1.8e-06  Score=84.76  Aligned_cols=181  Identities=15%  Similarity=0.036  Sum_probs=104.9

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ++.....+....+..+..+....+...++.+..+.+..  -...........++.+++.++.||+ |||+.++++..+..
T Consensus       251 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~  327 (451)
T PF00083_consen  251 RKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMA  327 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccc
Confidence            34555555555556555555555555556566677665  1222233455666777888999995 99999998888877


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHH-HHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLY-SLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~-~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      +..+.+.... ......+        +..+.. ..+...+. .....+..+....+.+|.||.+.      |....+..+
T Consensus       328 ~~~~~~~~~~-~~~~~~~--------~~~~~~-~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~  391 (451)
T PF00083_consen  328 ICSLILGIIF-FLGVSSS--------SWWSIL-SIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSY  391 (451)
T ss_pred             cccccccccc-ccccccc--------cccccc-cceeeeeccccccccccccccccccccccccc------ccccccccc
Confidence            7665554111 0111000        000111 11122222 22222445666688899999765      566677777


Q ss_pred             HHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      ...++++++++.+.+++.++.+-...|.+.++++++..++.
T Consensus       392 ~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~  432 (451)
T PF00083_consen  392 AVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFV  432 (451)
T ss_pred             ccccccccccccccccccccccccccchhhHHHHHHHHhhe
Confidence            77788888888888888877663445555555554444433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PTZ00207 hypothetical protein; Provisional

Probab=97.33  E-value=0.001  Score=67.77  Aligned_cols=177  Identities=8%  Similarity=-0.009  Sum_probs=120.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHccccc-CCchhH--HHHHHHHHHHHHHHHHHHHHHHhhhcccchh-------H
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEM-HFDIAG--ASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-------T   84 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~l-g~s~~~--a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-------~   84 (346)
                      ..+|+++...+|---+-..+..|+- .+-+.+ |.+..+  ..+.++.+.+.++++-+.+|+++ .++-||+       +
T Consensus       353 ~d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt  430 (591)
T PTZ00207        353 ARLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPIT  430 (591)
T ss_pred             hhHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchh
Confidence            4578888888876655555556655 333456 663333  23367889999999999999999 3444444       2


Q ss_pred             HH--HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064           85 CL--VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK  162 (346)
Q Consensus        85 i~--~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~  162 (346)
                      +.  +..+ ..++++++.+.  +|.                 ..++++-+++|++.|...+...+...|.|. ++     
T Consensus       431 ~~l~~~~~-~~~~~lll~~~--~p~-----------------~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~-----  484 (591)
T PTZ00207        431 IALFIPSV-CIITMLTLFLT--LPK-----------------AALPLPYFIAAFANGFMAATIALVTRTIFA-KD-----  484 (591)
T ss_pred             HHHHHHHH-HHHHHHHHHHH--CCc-----------------cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc-----
Confidence            22  2333 55566666654  231                 358899999999999999999999999999 66     


Q ss_pred             hhhhHHHHHHHHHHHHHHHH-Hhhhhhhhhc-------------cchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064          163 ALASYFNFYLFATTLAAMIG-VTAIVYVFID-------------QGWWLGFLISSVATLIGLIALAIGKPFY  220 (346)
Q Consensus       163 ~~~~~f~~~y~~~niG~~i~-~~~~~~i~~~-------------~g~~~~f~i~~~~~~~~~~i~~~~~~~~  220 (346)
                       -+..+|.-+.+.-+|+.+- ..+.+++.|.             ..++..|++.+++.+++.++-....-+|
T Consensus       485 -~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~  555 (591)
T PTZ00207        485 -PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY  555 (591)
T ss_pred             -hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence             4678888888888887764 3455665432             2488999988877777766654443333

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=97.26  E-value=0.01  Score=59.12  Aligned_cols=202  Identities=9%  Similarity=-0.060  Sum_probs=127.7

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHccc-ccCCchh------HH---H-HHHHHHHHHHHHHHHHHHHHhhhccc
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKN-EMHFDIA------GA---S-NTLTNFFGSTFLLCLVGGFISDTYLS   80 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~-~lg~s~~------~a---~-~~~~~~~~~~~~~~llgG~laD~~lG   80 (346)
                      .-||..+.++.++++.-++++....+...|+.+ .++-++.      ++   + +....+...+.+..++--++.+++ |
T Consensus       255 ~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~-g  333 (477)
T TIGR01301       255 YLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW-G  333 (477)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence            457899999999999999999888888888764 3442211      11   2 223334445456566667788885 8


Q ss_pred             c-hhHHHHHHHHHHHHHHHHHhhhccCC-CCCCCCCCCCC-CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCC
Q 019064           81 R-FATCLVFGTLEVLSLVMLTIQAYSKS-LHPPDCGKSSC-LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDEND  157 (346)
Q Consensus        81 R-~~~i~~~~~l~~~G~~ll~l~~~~p~-~~~~~~~~~~~-~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~  157 (346)
                      + |++-.++.++..+++....+....+. ..+.+.....- ++....+..++...++|+..+.....-.+++++..++++
T Consensus       334 ~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~  413 (477)
T TIGR01301       334 AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG  413 (477)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence            5 66667887888888777665432111 00000000000 011123556666778899999888888899998888543


Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccc--hhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          158 PKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQG--WWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       158 ~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g--~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      .+    .+...+.++.++.+.-++..+..+.+.+-.|  -...+.+.++.++++.+..+...|
T Consensus       414 ~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~  472 (477)
T TIGR01301       414 AG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP  472 (477)
T ss_pred             CC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence            22    4677778888888888877766665544333  455777788877777766554444

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.0016  Score=63.34  Aligned_cols=166  Identities=16%  Similarity=0.089  Sum_probs=117.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc---ccchhHHH-HHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY---LSRFATCL-VFGT   90 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~---lGR~~~i~-~~~~   90 (346)
                      +....+..+.+.-.+++-.=.+.+++|++ .+|.+..-.+.+-.+--+...+.+|+.|..+||+   +||||-.+ .+..
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~  110 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL  110 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence            55555666666667777655677888886 5888887777777777778899999999999986   58766554 4555


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKS-SCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFN  169 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~  169 (346)
                      ...+++.++..+   +++...-|++. .|........++++..+.=+..-..+...-++.+|...+++.+     ++..+
T Consensus       111 ~i~~~l~Lig~a---aDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~-----~~Ans  182 (498)
T KOG0637|consen  111 LIAVSLFLIGYA---ADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKK-----TRANS  182 (498)
T ss_pred             HHHHHHhhhhhH---hhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhh-----hccch
Confidence            566676655544   23322223322 2334556778888888888888888899999999998866532     22667


Q ss_pred             HHHHHHHHHHHHHHhhhhhh
Q 019064          170 FYLFATTLAAMIGVTAIVYV  189 (346)
Q Consensus       170 ~~y~~~niG~~i~~~~~~~i  189 (346)
                      ++-+.+.+|..+|....+|.
T Consensus       183 ~f~~f~avGnvLGY~~g~y~  202 (498)
T KOG0637|consen  183 VFSFFMAVGNVLGYALGSYL  202 (498)
T ss_pred             hHHHHHHhcceeeeeccccc
Confidence            77778899999888777755

>TIGR00805 oat sodium-independent organic anion transporter

Probab=96.83  E-value=0.0046  Score=63.86  Aligned_cols=83  Identities=18%  Similarity=0.203  Sum_probs=67.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhccc--chhHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTYLS--RFATCLVFGTL   91 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~lG--R~~~i~~~~~l   91 (346)
                      +.++...+..+++..+++++..+++.|+++++|++..+++.+.....+ ...++.+++|+++||+ +  .++.+.++.++
T Consensus       330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~  408 (633)
T TIGR00805       330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICL  408 (633)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHH
Confidence            356777788899999999999999999999999999999998877665 5678899999999996 6  45666666666


Q ss_pred             HHHHHHH
Q 019064           92 EVLSLVM   98 (346)
Q Consensus        92 ~~~G~~l   98 (346)
                      ..++.++
T Consensus       409 ~~~~~~~  415 (633)
T TIGR00805       409 STLSYLL  415 (633)
T ss_pred             HHHHHHH
Confidence            6665444

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]

Probab=96.72  E-value=0.052  Score=54.56  Aligned_cols=88  Identities=15%  Similarity=0.086  Sum_probs=55.5

Q ss_pred             CchHHHHHHHHHHHHHH-HHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENM-GFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~-a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      .+|.....+....+..+ ++..+..+.+..+ +..|.+... ............++.+++.++.||+ |||+.++.+...
T Consensus       292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~  368 (513)
T KOG0254|consen  292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG  368 (513)
T ss_pred             hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence            44444444444444444 3344444444443 344555432 3333444556667777789999996 999999999999


Q ss_pred             HHHHHHHHHhhh
Q 019064           92 EVLSLVMLTIQA  103 (346)
Q Consensus        92 ~~~G~~ll~l~~  103 (346)
                      ..++.+++....
T Consensus       369 m~~~~~~~~~~~  380 (513)
T KOG0254|consen  369 MSICLVILAVVG  380 (513)
T ss_pred             HHHHHHHHHHHH
Confidence            999988888753

>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.0043  Score=60.44  Aligned_cols=178  Identities=11%  Similarity=0.037  Sum_probs=115.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHH--------HHHHHHHHHHH-HHHHHHHHhhhcccchhHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASN--------TLTNFFGSTFL-LCLVGGFISDTYLSRFATC   85 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~--------~~~~~~~~~~~-~~llgG~laD~~lGR~~~i   85 (346)
                      +...-.++.-|.-.++||+..-+...-++ .+|+.+.+...        .......+.++ +..++.++.|+ +||++.-
T Consensus       304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~-iGRk~iq  381 (538)
T KOG0252|consen  304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDI-IGRKYIQ  381 (538)
T ss_pred             HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeeh-hhhHHHH
Confidence            55666677788889999998888777665 35554444333        12233334444 66778889998 5999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064           86 LVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKG-AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL  164 (346)
Q Consensus        86 ~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~  164 (346)
                      +-+.+++.+-...+...    ..+.        ++. .-....-+..   -++.-|...+.-..-+|.||.+-      |
T Consensus       382 ~~GF~~~~i~~~~~~~~----y~~~--------~~~~Gf~v~y~l~~---ff~NFGPn~ttfivpaE~FParv------R  440 (538)
T KOG0252|consen  382 LMGFFIMTIFFFVIAGP----YNQL--------ENTIGFVVLYSLTF---FFGNFGPNATTFIVPAEIFPARV------R  440 (538)
T ss_pred             HhhHHHHHHHHHHHcCC----cccc--------cccCceeehHHHHH---HHHhcCCCceeEEeehhhchHHH------h
Confidence            88888877755544432    2110        011 1111222222   23333444444555578898533      5


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhh-----ccchhHHHHHHHHHHHHHHHHHHh
Q 019064          165 ASYFNFYLFATTLAAMIGVTAIVYVFI-----DQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       165 ~~~f~~~y~~~niG~~i~~~~~~~i~~-----~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +......-.+.-+|++++.....++++     +.|.+..|.+.+.+++++.++.++
T Consensus       441 ~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l  496 (538)
T KOG0252|consen  441 STCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL  496 (538)
T ss_pred             hhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence            666666677788999999999999998     778999999999999888876654

>TIGR01272 gluP glucose/galactose transporter

Probab=96.58  E-value=0.0075  Score=56.55  Aligned_cols=85  Identities=12%  Similarity=-0.012  Sum_probs=66.9

Q ss_pred             hhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc---------
Q 019064          122 AIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID---------  192 (346)
Q Consensus       122 ~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~---------  192 (346)
                      .+.+.+.+++++++.|.+...+...++++|.-++++      +.+..|+......+|+.++|.+.+.+...         
T Consensus         8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~   81 (310)
T TIGR01272         8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV   81 (310)
T ss_pred             hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence            467889999999999999999999999999987654      45677888888999999999998866521         


Q ss_pred             -------cchhHHHHHHHHHHHHHHHH
Q 019064          193 -------QGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       193 -------~g~~~~f~i~~~~~~~~~~i  212 (346)
                             ..|++.|.+.+++.++..++
T Consensus        82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~  108 (310)
T TIGR01272        82 ATANAEAAKVHTPYLLLAGALAVLAII  108 (310)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence                   36888988655544433333

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=96.55  E-value=0.0025  Score=58.07  Aligned_cols=156  Identities=17%  Similarity=0.148  Sum_probs=91.7

Q ss_pred             HHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCC
Q 019064           38 MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSS  117 (346)
Q Consensus        38 l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~  117 (346)
                      .+.|+-+.+|+...+.+.+.-+-.+...+...+.|-++|+. |||+.-+    .|.+-+++..++-+.|           
T Consensus        59 YvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracv----tycitYiLsCiTKhSp-----------  122 (454)
T KOG4332|consen   59 YVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACV----TYCITYILSCITKHSP-----------  122 (454)
T ss_pred             eeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-cccccee----eehHHHHHHHHhhcCC-----------
Confidence            34566667888888888777666667777778889999985 9999654    4444445545543222           


Q ss_pred             CCCchhHHHHHHHHHHHHHhccccccchhh-hccCCCCCCChhhhhhhhhHHH-HHHHHHHHHHHHHHhhhhhhhhcc--
Q 019064          118 CLKGAIAAYFYGSLYLYSLGCGGNRGTLPA-LGAGQFDENDPKGAKALASYFN-FYLFATTLAAMIGVTAIVYVFIDQ--  193 (346)
Q Consensus       118 ~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a-~~adq~~~~~~~~~~~~~~~f~-~~y~~~niG~~i~~~~~~~i~~~~--  193 (346)
                           +.-.+++++.+-|+.++...+..-+ +++|.-+.++-++ +-.+.-|+ ..++...+-++++...+-++.+..  
T Consensus       123 -----qYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~Feq-qWls~TFskA~ffgNglvAiiaGlfgn~lvd~~sl  196 (454)
T KOG4332|consen  123 -----QYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQ-QWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSL  196 (454)
T ss_pred             -----ceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChH-hhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhcc
Confidence                 4556788999988888876655444 3455544433221 11222222 222334445555555555565553  


Q ss_pred             chhHHHHHHHHHHHHHHHHHHh
Q 019064          194 GWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       194 g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      |--.+|-..+...+++..+.+-
T Consensus       197 GPVAPFdAAacfLaigmAvil~  218 (454)
T KOG4332|consen  197 GPVAPFDAAACFLAIGMAVILS  218 (454)
T ss_pred             CCCCchHHHHHHHHHHHHHHHh
Confidence            4455665555555555554443

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=96.44  E-value=0.058  Score=52.26  Aligned_cols=129  Identities=16%  Similarity=0.035  Sum_probs=81.5

Q ss_pred             hHHHHHHHcccccCC---chhHH----HHHHHHHHHHHHHHHHHHHHHhhhcccc-hhHHHHHHHHHHHHHHHHHhhhcc
Q 019064           34 NGISMVLYFKNEMHF---DIAGA----SNTLTNFFGSTFLLCLVGGFISDTYLSR-FATCLVFGTLEVLSLVMLTIQAYS  105 (346)
Q Consensus        34 v~~~l~~yl~~~lg~---s~~~a----~~~~~~~~~~~~~~~llgG~laD~~lGR-~~~i~~~~~l~~~G~~ll~l~~~~  105 (346)
                      +....++|+++..+-   +..+.    +...++......+..|+-|-++|.. |+ |+.+-++..+-.+.+.+++..   
T Consensus        34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i---  109 (438)
T COG2270          34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI---  109 (438)
T ss_pred             eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh---
Confidence            345678898876554   43333    3334555666777788889999986 75 555555555555565555554   


Q ss_pred             CCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064          106 KSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA  185 (346)
Q Consensus       106 p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~  185 (346)
                      |.             +...+...+.+.+..++..+......++..|..++++-      ++.-+.-|-..++|+.+..+.
T Consensus       110 ~~-------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~------~riS~lg~~~gylgs~i~li~  170 (438)
T COG2270         110 PP-------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNM------GRISGLGWALGYLGSVILLIF  170 (438)
T ss_pred             CC-------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCcccc------CcccccccccccccchHHHHH
Confidence            32             22455555666678888888889999999888876542      223333344567777765444

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=96.43  E-value=0.06  Score=54.93  Aligned_cols=150  Identities=13%  Similarity=0.030  Sum_probs=91.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchh---HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHH-HHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIA---GASNTLTNFFGSTFLLCLVGGFISDTYLSRFATC-LVF   88 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~---~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i-~~~   88 (346)
                      .+|.+...+++.+.+...||++....+....+.++-+..   ..+.....+.....++.++.|++.-+ ++|.|-. +++
T Consensus       308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~-ir~~Kw~li~~  386 (599)
T PF06609_consen  308 DRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSK-IRHIKWQLIFG  386 (599)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHH-ccchhHHHHHH
Confidence            356788888889999999999988888877776665543   45556666666677777788888876 5876554 456


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064           89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF  168 (346)
Q Consensus        89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f  168 (346)
                      +.+..++..++....  |..             .+.  .+.-.++.++|.|+........  -|+.-.+.    ......
T Consensus       387 ~~~~ta~~Gama~~~--~~n-------------~~~--~i~~~~l~g~giG~~~~~~~~~--~ql~~p~~----~ig~a~  443 (599)
T PF06609_consen  387 SVLMTAFCGAMAAVR--PDN-------------KNA--AIAFLVLAGFGIGGILVPAIVI--AQLIVPDE----DIGTAT  443 (599)
T ss_pred             HHHHHHHHHHHHHcc--CCC-------------cch--HHHHHHHHHHhHHHHHHHHHHe--eEeeeCch----HHHHHH
Confidence            656555544444332  221             112  2334556677777665444433  34332221    145555


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q 019064          169 NFYLFATTLAAMIGVTAI  186 (346)
Q Consensus       169 ~~~y~~~niG~~i~~~~~  186 (346)
                      ...-....+|+.++..+-
T Consensus       444 gL~~s~R~~GGsIg~aIy  461 (599)
T PF06609_consen  444 GLTGSIRSIGGSIGYAIY  461 (599)
T ss_pred             HHHHHHHHHhhHHHHHHH
Confidence            555556677777776654

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>PRK03612 spermidine synthase; Provisional

Probab=96.42  E-value=0.22  Score=50.24  Aligned_cols=134  Identities=16%  Similarity=0.085  Sum_probs=72.3

Q ss_pred             HHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH-HHHHHHHhhhccCCCCCCCCC
Q 019064           36 ISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV-LSLVMLTIQAYSKSLHPPDCG  114 (346)
Q Consensus        36 ~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~-~G~~ll~l~~~~p~~~~~~~~  114 (346)
                      ..+.-.+...+|-+..+.+.++++|.++..++..++|+++++-..++-.+-+...+.. +...++....  +..      
T Consensus        35 v~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~--~~~------  106 (521)
T PRK03612         35 LLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAF--AFQ------  106 (521)
T ss_pred             HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH------
Confidence            3344444445788888889999999999999999888887553222222222221111 1111111111  100      


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064          115 KSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF  190 (346)
Q Consensus       115 ~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~  190 (346)
                            ......++...++.++-.|+..|.+..+..+...++       .++-.+..|....+|+++|.++.+++-
T Consensus       107 ------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ntlGa~~G~l~~~~vL  169 (521)
T PRK03612        107 ------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAADYLGALVGGLAFPFLL  169 (521)
T ss_pred             ------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence                  001122233344566777777777666654432211       123345567777888888877776653

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=96.40  E-value=0.071  Score=44.82  Aligned_cols=98  Identities=11%  Similarity=0.054  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 019064           61 FGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGG  140 (346)
Q Consensus        61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~  140 (346)
                      .+...+..++...+-++ +|.|++++++.+.+.+=.....    .|                +.+.++.+-.+.|+|.+.
T Consensus        47 Y~~~~~s~l~~P~iv~~-lg~K~sm~lg~~~y~~y~~~~~----~~----------------~~~~l~~~s~l~G~~~a~  105 (156)
T PF05978_consen   47 YGSFAISCLFAPSIVNK-LGPKWSMILGSLGYAIYIASFF----YP----------------NSYTLYPASALLGFGAAL  105 (156)
T ss_pred             HHHHHHHHHhHHHHHHH-HhhHHHHHHHHHHHHHHHHHHH----hh----------------hHHHHHHHHHHHhhhhHH
Confidence            33444455556667777 5999999999988875332221    12                356788888899999999


Q ss_pred             cccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064          141 NRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA  185 (346)
Q Consensus       141 ~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~  185 (346)
                      .......++.+..++++      +++..+.++-..+.+.++|..+
T Consensus       106 lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~  144 (156)
T PF05978_consen  106 LWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLF  144 (156)
T ss_pred             hhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHH
Confidence            99999998887665332      3445555444555555555444

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=96.25  E-value=0.062  Score=52.45  Aligned_cols=181  Identities=17%  Similarity=0.121  Sum_probs=99.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh-HHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA-TCLVFGTLEVLS   95 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~-~i~~~~~l~~~G   95 (346)
                      +.++.++....-..||++...|-.-+. .-|++...++.+...-.+.+.++.++.|.++||. ..+| ++++......++
T Consensus       268 F~il~~~ygi~~g~F~~l~~~l~~~l~-~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~v~  345 (480)
T KOG2563|consen  268 FIILAICYGIGLGLFNSLSTLLNLALC-PSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFALVG  345 (480)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHhhhccc-cccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHHHH
Confidence            344444444455556655555443332 4478888899998888999999999999999996 6555 445545555555


Q ss_pred             H-HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCC-CCCCChhhhhhhhhHHHHHHH
Q 019064           96 L-VMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQ-FDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        96 ~-~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq-~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      . .++.... .+               ...+.++....++|...-+..|.-.-++.|. ||..+ +    .++..  ...
T Consensus       346 ~~~l~~~t~-~~---------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-~----tSsGl--l~~  402 (480)
T KOG2563|consen  346 TLMLLTCTL-FL---------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-G----TSSGL--LNL  402 (480)
T ss_pred             HHHHHHhhc-cC---------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-c----cccee--EEe
Confidence            3 2222221 11               1234556666677777777888777777766 45433 1    11111  111


Q ss_pred             HHHHHHHHHHhhhhhhhhccc---hhHHH-HHHHHHHHHHHHHHHhcCcccee
Q 019064          174 ATTLAAMIGVTAIVYVFIDQG---WWLGF-LISSVATLIGLIALAIGKPFYRI  222 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g---~~~~f-~i~~~~~~~~~~i~~~~~~~~~~  222 (346)
                      ..++-+.+=..+.+...+..+   |..+. ...+....+...+..+.++.|++
T Consensus       403 ~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R  455 (480)
T KOG2563|consen  403 SGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRR  455 (480)
T ss_pred             ehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHh
Confidence            223322222334444455444   44433 33334444455555555665543

>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]

Probab=96.12  E-value=0.061  Score=53.36  Aligned_cols=154  Identities=11%  Similarity=0.048  Sum_probs=109.7

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHH-HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFI-ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVF   88 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~y-gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~   88 (346)
                      +.+..|..+.++.+.+.....-. +-..++..|+..+++++..+.+...+......++..++...+--+.+|-++++.+|
T Consensus       235 ~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lG  314 (463)
T KOG2816|consen  235 KVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLG  314 (463)
T ss_pred             ccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHH
Confidence            34556666665555544333333 23336678889999999999999999999999999988874444446988899999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHH
Q 019064           89 GTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYF  168 (346)
Q Consensus        89 ~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f  168 (346)
                      ++...++..++.+..                   +.|..+.+..+ ....+...|...++..-+.+.++      .+..+
T Consensus       315 l~~~~~~~~~~af~~-------------------~~w~~~~~~v~-~~~~~~~~pa~~s~~s~~v~~~e------~g~v~  368 (463)
T KOG2816|consen  315 LLSEFLQLLLFAFAT-------------------ETWMMFAAGVV-VALAGIVFPAIRAFASILVSPEE------QGKVF  368 (463)
T ss_pred             HHHHHHHHHHHHHhc-------------------cchhhhHHHHH-HHhhcchhHHHHhHHHhhccccc------ccchh
Confidence            999888888877753                   23444544443 44456677888888888877554      57788


Q ss_pred             HHHHHHHHHHHHHHHhhhhhh
Q 019064          169 NFYLFATTLAAMIGVTAIVYV  189 (346)
Q Consensus       169 ~~~y~~~niG~~i~~~~~~~i  189 (346)
                      .+......+.+.+++.+-+.+
T Consensus       369 ~~is~i~~l~~~~~~~~~~~i  389 (463)
T KOG2816|consen  369 GIISGIEGLSGVVSPALYGNI  389 (463)
T ss_pred             hHHHHHHHHhhhhhHHHHHHH
Confidence            888888888777777765544

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=96.00  E-value=0.062  Score=40.22  Aligned_cols=72  Identities=8%  Similarity=0.062  Sum_probs=56.7

Q ss_pred             HHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhh
Q 019064           26 LENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQ  102 (346)
Q Consensus        26 ~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~  102 (346)
                      .-||+|    +.+.+.+.++.++|..+++.+.+....++.++.+...++.++. .+++.+..+.++..+.+..+.+.
T Consensus         6 igRFay----TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~   77 (85)
T PF06779_consen    6 IGRFAY----TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT   77 (85)
T ss_pred             hHHHHH----HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence            458888    4566677789999999999999988888888888888888873 66777777777777776666654

Note that many members are hypothetical proteins.

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=95.94  E-value=0.24  Score=49.67  Aligned_cols=138  Identities=9%  Similarity=-0.042  Sum_probs=82.5

Q ss_pred             HHHHHHHcccc-----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchh------HHHHHHHHHHHHHHHHHhhh
Q 019064           35 GISMVLYFKNE-----MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFA------TCLVFGTLEVLSLVMLTIQA  103 (346)
Q Consensus        35 ~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~------~i~~~~~l~~~G~~ll~l~~  103 (346)
                      .+.+.+|..+.     +|++. .+++.-+.-.....+..|+.+++=.+...|+|      -+.+++++..+|++++.+..
T Consensus       288 ~~sl~lfa~~~vd~~~~g~~i-p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~  366 (493)
T PRK15462        288 GSSISLYIDRFVNRDMFGYTV-PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSA  366 (493)
T ss_pred             hHHHHHHHHHhccchhcceee-CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            34455555543     34332 23333344344444445555666555311221      25678888888888887754


Q ss_pred             ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH-HHHHHHHH
Q 019064          104 YSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA-TTLAAMIG  182 (346)
Q Consensus       104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~-~niG~~i~  182 (346)
                      ....-.          ...+.+++++...+..+|+=.+.|.-.++.++..|++-      ++..+..++.. ..+|..++
T Consensus       367 ~~~~~~----------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~------~g~~mg~w~l~~~~~~~~~~  430 (493)
T PRK15462        367 RWSAMY----------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV------TGVLTGIYMLLSGAIANYLA  430 (493)
T ss_pred             hhcCCC----------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHHHH
Confidence            322100          12356778888889999999999999999999988433      56666666653 35776666


Q ss_pred             Hhhhhhh
Q 019064          183 VTAIVYV  189 (346)
Q Consensus       183 ~~~~~~i  189 (346)
                      ..+..+.
T Consensus       431 g~~~~~~  437 (493)
T PRK15462        431 GVIADQT  437 (493)
T ss_pred             HHHHHHh
Confidence            6555544

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=95.71  E-value=1.3  Score=44.09  Aligned_cols=163  Identities=11%  Similarity=0.026  Sum_probs=85.9

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCch-----hHHHHHHHHHHH-HHHHHHHHHHHHhhhcccchhHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDI-----AGASNTLTNFFG-STFLLCLVGGFISDTYLSRFATC   85 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~-----~~a~~~~~~~~~-~~~~~~llgG~laD~~lGR~~~i   85 (346)
                      +-+|.+....+.-+|--+.|+-+.+     +.+.+..+.     .....+...... ...+..++-+++++|+ +|.+.+
T Consensus         4 ~E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf   77 (472)
T TIGR00769         4 HELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALF   77 (472)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhH
Confidence            3456677777777777777765543     344454432     223333332222 2333367789999996 998877


Q ss_pred             HHHHHHHHHHHHHHHhhhccCC---CCCCC-CCCC--CCCC----------chhHHHHHHHHHHHHHhcccccc-chhhh
Q 019064           86 LVFGTLEVLSLVMLTIQAYSKS---LHPPD-CGKS--SCLK----------GAIAAYFYGSLYLYSLGCGGNRG-TLPAL  148 (346)
Q Consensus        86 ~~~~~l~~~G~~ll~l~~~~p~---~~~~~-~~~~--~~~~----------~~~~~~~~~~l~l~~iG~g~~~~-~~~a~  148 (346)
                      .+.......-+.++.+.- .|.   ++|.. |+..  .-+.          .+....|++..=+.+   ....+ ...++
T Consensus        78 ~~~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~---~~vvS~lFW~f  153 (472)
T TIGR00769        78 YTVISPFLGFFALFAFVI-YPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG---SVVLSLLFWGF  153 (472)
T ss_pred             HHHHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH---HHHHHHHHHHH
Confidence            665444444333333321 121   11110 1000  0000          001112222111111   11112 44567


Q ss_pred             ccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q 019064          149 GAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVF  190 (346)
Q Consensus       149 ~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~  190 (346)
                      ..|.+..++      -+++|..+....|+|.++|+.+..++.
T Consensus       154 andi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~  189 (472)
T TIGR00769       154 ANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS  189 (472)
T ss_pred             HHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788887432      578999999999999999998888765

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=95.70  E-value=0.058  Score=53.74  Aligned_cols=130  Identities=9%  Similarity=-0.040  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhcccccc
Q 019064           64 TFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRG  143 (346)
Q Consensus        64 ~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~  143 (346)
                      -.+..++.++|-.++ |+-+++.+++....+=++.++...                   +.|....-=++.++..+.+++
T Consensus       419 EI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L~-------------------n~W~vLPieilqgit~aliWa  478 (618)
T KOG3762|consen  419 EILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYLQ-------------------NPWMVLPIEILQGITHALIWA  478 (618)
T ss_pred             hHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHhc-------------------CchheeeHHHHHHHHHHHHHH
Confidence            334455668999984 999999988887777666555432                   345555556689999999999


Q ss_pred             chhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCc
Q 019064          144 TLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       144 ~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                      ++.+++.+-.|++-   ++..+..+.-.+.  .+|-.+|.++++.+.+.+|-+..|-+.++..++.++.+....+
T Consensus       479 a~~sY~s~vaPp~l---~at~Q~l~~g~f~--GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~  548 (618)
T KOG3762|consen  479 AIISYASHVAPPGL---RATAQGLLQGIFH--GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQL  548 (618)
T ss_pred             HHHHHHHhhCCCcc---hHHHHHHHHHHhc--ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999554   3334444444332  3444455666677777788888888877777666666655443

>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]

Probab=95.25  E-value=0.33  Score=46.62  Aligned_cols=153  Identities=15%  Similarity=0.151  Sum_probs=108.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHc-ccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYF-KNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl-~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      +...+.+++...+-....|....|.+.++ .+.+|+++.|.+.+...-.....+.++.-+...|+..|.-+..+....+.
T Consensus       259 ~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~  338 (451)
T KOG2615|consen  259 FISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLL  338 (451)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHH
Confidence            45677777766666666666667777777 45799999999988877666777777777777888766555555444444


Q ss_pred             HHH-HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHH
Q 019064           93 VLS-LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFY  171 (346)
Q Consensus        93 ~~G-~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~  171 (346)
                      .+- .+++....                   ....++++..+-++..+...+|+..+.....+.+.      |+...+.+
T Consensus       339 ~vP~~llls~~~-------------------~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~  393 (451)
T KOG2615|consen  339 IVPAFLLLSLAR-------------------TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIF  393 (451)
T ss_pred             HHHHHHHHhccc-------------------cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHH
Confidence            433 23333221                   23568888999999999999999998888777543      67777777


Q ss_pred             HHHHHHHHHHHHhhhhhhhh
Q 019064          172 LFATTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       172 y~~~niG~~i~~~~~~~i~~  191 (346)
                      -....++-++||.+.+.++.
T Consensus       394 ~Sl~alaRaiGPlv~g~i~~  413 (451)
T KOG2615|consen  394 RSLGALARAIGPLVSGVIFS  413 (451)
T ss_pred             HHHHHHHHHhhhhhhheeEE
Confidence            77788888888888876654

>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]

Probab=95.25  E-value=1  Score=45.13  Aligned_cols=146  Identities=7%  Similarity=-0.057  Sum_probs=82.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      +....+....+.....|||+.-+...     +|.+..-.......   .-...-...+.+-|+. ||+.....+.++..+
T Consensus       322 ~~~~~~~~~~~~~~~~y~gl~~~~~~-----lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~  392 (521)
T KOG0255|consen  322 YRTLYLLFIWFVFSLVYYGLSLNVSG-----LGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGI  392 (521)
T ss_pred             HHHHHHHHHHHHHhHHHHhhhhhhhh-----cCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence            44445555555566666666555443     44443332222222   3333344457889985 999999999999988


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.+.+....   ..             ...+...+...+...+.+....+...+.+|.+|+.-      |..........
T Consensus       393 ~~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~  450 (521)
T KOG0255|consen  393 GLLLFGWLP---DD-------------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNTAVGAISAA  450 (521)
T ss_pred             HHHHHHHhh---cc-------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHHHHHHHHHH
Confidence            887777653   11             110112222222223333333444777889998543      44555555556


Q ss_pred             HHHHHHHHHhhhhhhhh
Q 019064          175 TTLAAMIGVTAIVYVFI  191 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~  191 (346)
                      ..+|+++++.+......
T Consensus       451 ~~~~~i~ap~~~~~~~~  467 (521)
T KOG0255|consen  451 ARLGSILAPLFPLLLRQ  467 (521)
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            77888887766544433

>KOG3762 consensus Predicted transporter [General function prediction only]

Probab=94.80  E-value=0.053  Score=54.04  Aligned_cols=66  Identities=20%  Similarity=0.221  Sum_probs=51.5

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH-HHHHHHH
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV-LSLVMLT  100 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~-~G~~ll~  100 (346)
                      .+.+.+..|.. ++|+++++.+.++..--...++.+|+.|++|||| -++|..++++.+.. ...+++.
T Consensus        29 ~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~-r~~r~lllgsl~~~v~a~fll~   95 (618)
T KOG3762|consen   29 SLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRY-RKRRPLLLGSLLLSVTATFLLV   95 (618)
T ss_pred             ccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHhee
Confidence            56678888886 6999999999999999999999999999999998 55555555555544 4444444

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=94.66  E-value=1.2  Score=43.42  Aligned_cols=153  Identities=12%  Similarity=0.113  Sum_probs=87.4

Q ss_pred             HHHHHHcccc-cCCchhHHHHHHH-HHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 019064           36 ISMVLYFKNE-MHFDIAGASNTLT-NFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDC  113 (346)
Q Consensus        36 ~~l~~yl~~~-lg~s~~~a~~~~~-~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~  113 (346)
                      +++..|++++ .|++..+...-+. ++.-.....-++...+.|. +|.|++++++.+...+-..++....          
T Consensus        24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~-l~Ykpviil~~~~~i~t~~lll~~~----------   92 (412)
T PF01770_consen   24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDY-LRYKPVIILQALSYIITWLLLLFGT----------   92 (412)
T ss_pred             ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence            5688999987 8999988876554 3444444556677999997 5777777777776666555554432          


Q ss_pred             CCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH-HHHHHHHHHHhhhhhhhhc
Q 019064          114 GKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF-ATTLAAMIGVTAIVYVFID  192 (346)
Q Consensus       114 ~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~-~~niG~~i~~~~~~~i~~~  192 (346)
                               +....-+.-+.-    |...++-.++-+-.|..-+++.-.+..+...--.. +..+|+++|.++..  .+.
T Consensus        93 ---------sv~~mq~~q~~y----g~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs--~~~  157 (412)
T PF01770_consen   93 ---------SVLAMQLMQFFY----GLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS--FGG  157 (412)
T ss_pred             ---------cHHHHHHHHHHH----HHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcC
Confidence                     223333333333    33445555666666665554432223333333222 23445555554433  233


Q ss_pred             cchhHHHHHHHHHHHHHHHHHH
Q 019064          193 QGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       193 ~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .++...+.+......+++++-+
T Consensus       158 ~sy~~L~~isl~~~~~a~~~~~  179 (412)
T PF01770_consen  158 VSYFQLNYISLASVSLALLIAL  179 (412)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH
Confidence            5566666777766666666543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=93.24  E-value=3.5  Score=40.60  Aligned_cols=136  Identities=10%  Similarity=-0.013  Sum_probs=93.2

Q ss_pred             HhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 019064           33 ANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPD  112 (346)
Q Consensus        33 gv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~  112 (346)
                      +.-..+..|+..+ |++....+..=..-......+..+..++-+|+ |-.|+=.++......-..+...+-..|....  
T Consensus       276 sf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~~--  351 (432)
T PF06963_consen  276 SFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSPF--  351 (432)
T ss_pred             cCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCCc--
Confidence            4446678888876 99988888777777778888888999999985 9999988888776654333333322232110  


Q ss_pred             CCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q 019064          113 CGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTA  185 (346)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~  185 (346)
                             +..+...++.+..+-=+|.=++.-+..-+.-|..|+++      |+.+.+.-.-..|+-.++...+
T Consensus       352 -------~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  352 -------SSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             -------hhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHH
Confidence                   12356667777777778888888888888877777543      5666666555566666655443

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=92.23  E-value=2.4  Score=42.07  Aligned_cols=75  Identities=13%  Similarity=0.014  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccc
Q 019064           61 FGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGG  140 (346)
Q Consensus        61 ~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~  140 (346)
                      -....+..++++-+-|. +|.|+++.+++..|..-.+-+..    |                +.+.++.+-.++|+|.+.
T Consensus        60 Y~~ftv~~l~~psiv~~-i~~K~~lv~ga~~y~~f~~gfl~----~----------------N~y~~yfssallG~Gaal  118 (461)
T KOG3098|consen   60 YAFFTVSCLFAPSIVNF-LGPKWALVIGATCYAAFPLGFLF----P----------------NSYYLYFSSALLGFGAAL  118 (461)
T ss_pred             HHHHHHHHHhhHHHHHH-hhHHHHHHHHhHHHHHHHHHHHh----c----------------chHHHHHHHHHhhhhHHh
Confidence            33445566777888998 59999999998887764333222    1                356788899999999998


Q ss_pred             cccchhhhccCCCCCC
Q 019064          141 NRGTLPALGAGQFDEN  156 (346)
Q Consensus       141 ~~~~~~a~~adq~~~~  156 (346)
                      ...-...+..+...++
T Consensus       119 lw~GqG~ylt~~st~~  134 (461)
T KOG3098|consen  119 LWTGQGGYLTSNSTRE  134 (461)
T ss_pred             eecccceehhhcCChh
Confidence            8887777777766643

>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]

Probab=91.60  E-value=0.56  Score=48.82  Aligned_cols=76  Identities=13%  Similarity=0.120  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-ccchhHHHHHHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTY-LSRFATCLVFGTL   91 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~-lGR~~~i~~~~~l   91 (346)
                      ...+.++...+|..++-|..++++-|+.+++|.+.+.|..+...+.+ ...++..+||++.-|+ +.-+.+..+.++.
T Consensus       393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~  470 (735)
T KOG3626|consen  393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC  470 (735)
T ss_pred             hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999988866544 5667888999999987 3444444433333

>KOG3098 consensus Uncharacterized conserved protein [Function unknown]

Probab=91.58  E-value=8.8  Score=38.09  Aligned_cols=92  Identities=12%  Similarity=0.028  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHhhhc--ccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC-CCCCchhHHHHHHHHHHHHHhcc
Q 019064           63 STFLLCLVGGFISDTY--LSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKS-SCLKGAIAAYFYGSLYLYSLGCG  139 (346)
Q Consensus        63 ~~~~~~llgG~laD~~--lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~l~l~~iG~g  139 (346)
                      ..+++.++.+.+.+|.  +||++++.++..++.++.++..+.-  |...|-.-.+. .-.-+.+..+..+--.+.|+|-+
T Consensus       291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~  368 (461)
T KOG3098|consen  291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--PNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA  368 (461)
T ss_pred             HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccc--cccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence            3444556666676553  4899999999999999887776652  54332100000 00112334444445557899999


Q ss_pred             ccccchhhhccCCCCCC
Q 019064          140 GNRGTLPALGAGQFDEN  156 (346)
Q Consensus       140 ~~~~~~~a~~adq~~~~  156 (346)
                      ........++++.++++
T Consensus       369 ~~~t~~~~ii~~~~~~~  385 (461)
T KOG3098|consen  369 CFNTQRYVIIALLYPDD  385 (461)
T ss_pred             HHHHHHHHHHHHHhcCc
Confidence            99999999999999644

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=89.46  E-value=23  Score=34.92  Aligned_cols=184  Identities=11%  Similarity=-0.048  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 019064           17 CTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSL   96 (346)
Q Consensus        17 ~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~   96 (346)
                      .+.+...-++.++.-=....-.++|+.+-+.-+..-.+..-..-.+...+..+.-|...||. -|.+++..+.++.-+..
T Consensus         4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv   82 (432)
T PF06963_consen    4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV   82 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence            34444444444444433444456666654332322222222333455566666778888996 89999887776654432


Q ss_pred             HH----HHhhhccCCCCCCCCCCCCCCCch-hHHHHHHHHHHHHHhccccccchhhhccCCCC---CCChhhhhhhhhHH
Q 019064           97 VM----LTIQAYSKSLHPPDCGKSSCLKGA-IAAYFYGSLYLYSLGCGGNRGTLPALGAGQFD---ENDPKGAKALASYF  168 (346)
Q Consensus        97 ~l----l~l~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~---~~~~~~~~~~~~~f  168 (346)
                      .+    +.+....+...        ..++. ...++.+...+-++..=+..++-.+.--|...   ++++..   +.+.-
T Consensus        83 ~~s~~~~~~l~~~~~~~--------~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~---La~~N  151 (432)
T PF06963_consen   83 AASCALFLLLLSYPSSS--------SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGA---LARMN  151 (432)
T ss_pred             HHHHHHHHHHHhCCccc--------cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhh---HHHHH
Confidence            22    11111111110        00011 12222222222333322333334444445432   222221   22222


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHH
Q 019064          169 NFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIA  212 (346)
Q Consensus       169 ~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i  212 (346)
                      .+.-=.=-+--++||.+.+.+....|...+..+.++..+++..+
T Consensus       152 A~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v  195 (432)
T PF06963_consen  152 ATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV  195 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence            11111112356678888888888788887777777777666665

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]

Probab=88.60  E-value=13  Score=36.16  Aligned_cols=157  Identities=13%  Similarity=0.044  Sum_probs=86.1

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhh-----hcccchhHHH
Q 019064           12 GGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISD-----TYLSRFATCL   86 (346)
Q Consensus        12 ~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD-----~~lGR~~~i~   86 (346)
                      +..+.+.++++..+.+..-+ |+...+|..++ .-|.|-.+.+....  ...-+-.=++.+.+.|     | +||||.-+
T Consensus        28 ~d~~~illLl~LYllQGiP~-GL~~~iP~lL~-ak~vSyt~~a~fS~--ay~P~sLKllWaPiVDs~y~k~-~GrrksWv  102 (510)
T KOG3574|consen   28 GDRSSILLLLFLYLLQGIPL-GLIGAIPLLLQ-AKGVSYTSQAIFSF--AYWPFSLKLLWAPIVDSVYSKR-FGRRKSWV  102 (510)
T ss_pred             hhhhhHHHHHHHHHHcCCch-hHhhhhHHHhc-CCCcchhhhhhhhh--hhhHHHHHHHHHhhhHHHHHHh-hcccccee
Confidence            45677888888888888776 77776665555 44666555433222  2233445678888888     7 49999765


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhh
Q 019064           87 VFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALAS  166 (346)
Q Consensus        87 ~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~  166 (346)
                      += .-+.+|.+++.++-..+....   +++.   ..+...+...++++-++.+.-...+-...-.....++      .+-
T Consensus       103 vp-~q~llG~~mllLs~~v~~~~g---~ng~---~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~------lgy  169 (510)
T KOG3574|consen  103 VP-CQYLLGLFMLLLSYLVDRGLG---GNGG---LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN------LGY  169 (510)
T ss_pred             ee-hHHHHHHHHHHHhhCCCcccc---cCCC---CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh------cCc
Confidence            43 234567666666543222111   1111   1122223233445555555555555444444444222      333


Q ss_pred             HHHHHHHHHHHHHHHHHhhh
Q 019064          167 YFNFYLFATTLAAMIGVTAI  186 (346)
Q Consensus       167 ~f~~~y~~~niG~~i~~~~~  186 (346)
                      .-...-.+.|.|.++|.++.
T Consensus       170 aST~q~Vg~~~GyfL~~~if  189 (510)
T KOG3574|consen  170 ASTCQSVGQTAGYFLGNVVF  189 (510)
T ss_pred             hhHHHHHHHhhhHHhhccee
Confidence            44444556788888876653

>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]

Probab=88.51  E-value=2.7  Score=41.44  Aligned_cols=33  Identities=27%  Similarity=0.199  Sum_probs=26.1

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 019064           46 MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTY   78 (346)
Q Consensus        46 lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~   78 (346)
                      .|.+..+......++..+..++.++||.++|++
T Consensus       278 ~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~  310 (493)
T KOG1330|consen  278 IGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL  310 (493)
T ss_pred             hCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence            355555556666778889999999999999993

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=88.19  E-value=0.15  Score=51.77  Aligned_cols=84  Identities=14%  Similarity=0.173  Sum_probs=0.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHH-HHHHHHHHHHHHhhhc-ccchhHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFG-STFLLCLVGGFISDTY-LSRFATCLVFGTLE   92 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~-~~~~~~llgG~laD~~-lGR~~~i~~~~~l~   92 (346)
                      +...++.+...+|.+...|..++++-|++++++.+.++|+.+.....+ ...++.++||++-.|+ ++.++.+....+..
T Consensus       305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~  384 (539)
T PF03137_consen  305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS  384 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence            344566778888999999999999999999999999999988876544 6778899999999997 44555555555555


Q ss_pred             HHHHHH
Q 019064           93 VLSLVM   98 (346)
Q Consensus        93 ~~G~~l   98 (346)
                      .+..++
T Consensus       385 ~v~~~~  390 (539)
T PF03137_consen  385 IVSVIL  390 (539)
T ss_dssp             ------
T ss_pred             HHHHHH
Confidence            554433

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG3097 consensus Predicted membrane protein [Function unknown]

Probab=88.04  E-value=6  Score=37.49  Aligned_cols=115  Identities=6%  Similarity=0.015  Sum_probs=66.2

Q ss_pred             ccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 019064           10 QKGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFG   89 (346)
Q Consensus        10 ~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~   89 (346)
                      +++..|.++.+-..-+....+|.|. .||.......+|.  ...+.+.........+.|    .+-. ++|-|+|+.++.
T Consensus        24 ~~~~~knv~i~s~~fl~~f~a~~gl-~nlq~~vn~~lg~--~sl~~~y~~l~~s~m~~~----~~Ir-~~g~K~tm~lav   95 (390)
T KOG3097|consen   24 RLGILKNVLILSIAFLLTFTAYLGL-QNLQTSVNYDLGT--VSLGALYLSLIDSSMFMP----LLIR-FLGTKWTMVLAV   95 (390)
T ss_pred             ccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHhcCccc--chhhhhhHHHHHHHHHHH----HHHH-HHhhHHHHHHHH
Confidence            3344566776666656656666554 7777777654443  333333333343444444    4444 579999999888


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCC
Q 019064           90 TLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQ  152 (346)
Q Consensus        90 ~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq  152 (346)
                      ..|..-.    .....|                ...-++.+-...|.|.+.+.+.-.+++++.
T Consensus        96 ~~Y~lyi----A~Nl~p----------------r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~  138 (390)
T KOG3097|consen   96 FPYALYI----AANLEP----------------RYETLVPAGLVLGMAAGPIWASKGTYLTPM  138 (390)
T ss_pred             HHHHHHH----Hhhcch----------------hHHhhccHHHhhccccccccccCcceecHH
Confidence            7776531    111111                223344455567888888887777776544

>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]

Probab=85.18  E-value=8.4  Score=35.67  Aligned_cols=139  Identities=11%  Similarity=0.045  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcccchh---HHHHHHHHHHHHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHH
Q 019064           53 ASNTLTNFFGSTFLLCLVGGFISDTYLSRFA---TCLVFGTLEVLSLVMLTIQAY-SKSLHPPDCGKSSCLKGAIAAYFY  128 (346)
Q Consensus        53 a~~~~~~~~~~~~~~~llgG~laD~~lGR~~---~i~~~~~l~~~G~~ll~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~  128 (346)
                      -+.+...|+..+.++.-+...+..+  .|++   .+.+...+....+.+..+..+ .|+             ..+...-+
T Consensus       284 hGfiFatFMlASmLGSSla~Rl~s~--s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~-------------kes~~~s~  348 (454)
T KOG4332|consen  284 HGFIFATFMLASMLGSSLASRLLSR--SSPKVESYMQIVFLVSIAALLLPILTSSVSPS-------------KESPSESL  348 (454)
T ss_pred             chhHHHHHHHHHHHhhHHHHHHHhc--CCcccchHHHHHHHHHHHHHHHHHHHhccCCC-------------cCCchHHH
Confidence            3567777776666666555555554  2333   233444443333333333221 122             11233346


Q ss_pred             HHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHH
Q 019064          129 GSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLI  208 (346)
Q Consensus       129 ~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~  208 (346)
                      ++..++-...|.+.|.+.-+=.+..|++.      ++..+|||-.-.|+-.-++....---....+-+..|.+|.+.+.+
T Consensus       349 i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~  422 (454)
T KOG4332|consen  349 IGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFV  422 (454)
T ss_pred             HHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHH
Confidence            77778888889999998776555555432      688999998877776554422110001113556788888887776


Q ss_pred             HHHH
Q 019064          209 GLIA  212 (346)
Q Consensus       209 ~~~i  212 (346)
                      +.+.
T Consensus       423 a~i~  426 (454)
T KOG4332|consen  423 ASIL  426 (454)
T ss_pred             HHHH
Confidence            6543

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=83.76  E-value=19  Score=36.03  Aligned_cols=109  Identities=10%  Similarity=-0.049  Sum_probs=67.3

Q ss_pred             HHHHHHHHHHHHhhhcccch-------hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 019064           63 STFLLCLVGGFISDTYLSRF-------ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYS  135 (346)
Q Consensus        63 ~~~~~~llgG~laD~~lGR~-------~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~  135 (346)
                      .-.+..++.+++--+. +|+       .-.-++..+...|++++........ .|        +...+.++++.+.++++
T Consensus       336 ~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~-~~--------~~~~s~~~lil~y~l~s  405 (498)
T COG3104         336 FIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG-GP--------SGLVSVWWLVLSYVLQS  405 (498)
T ss_pred             HHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc-CC--------CCCcCHHHHHHHHHHHH
Confidence            3344444555655552 333       1334566666667666665521111 00        01346788999999999


Q ss_pred             HhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 019064          136 LGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIV  187 (346)
Q Consensus       136 iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~  187 (346)
                      +|+=++.|.-.++.+..-|+      .-++..++.|+.+...|..++..+.+
T Consensus       406 ~gEL~iSpvGLs~~t~laP~------~~~s~~ma~wfLt~a~~~~l~g~va~  451 (498)
T COG3104         406 FGELFISPVGLSMVTKLAPP------ALKSFIMAMWFLTVAAGQTLGGQVAG  451 (498)
T ss_pred             HHHHHhCHHHHHHHHHhChH------HHHHHHHHHHHHHHHHHHHhhceecc
Confidence            99988888888877777663      22466666777777777777766655

>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]

Probab=81.90  E-value=4.9  Score=41.12  Aligned_cols=130  Identities=22%  Similarity=0.154  Sum_probs=75.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064           83 ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK  162 (346)
Q Consensus        83 ~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~  162 (346)
                      ++...-+..+.+|..++-..++. .+             ....+.++...+...+ ++..+|+.++.++++...  ..-.
T Consensus        32 ~~g~~~s~~~il~~e~~e~~a~~-g~-------------~~nlv~ylt~~~~~~~-~~aa~~v~~f~G~~~~~~--l~g~   94 (571)
T KOG1237|consen   32 KTGGWLSAPFILGNEVLERLAFF-GL-------------VSNLVTYLTLELHASG-GGAANNVNAFGGTQFLLP--LLGA   94 (571)
T ss_pred             eechhHhHHHHHHHHHHHHHhHh-cc-------------hhHHHHHHHHHhccch-HHHHHHHHHHhhHHHHHH--HHHH
Confidence            44444455566666666655432 11             1234556666666666 889999999999999752  2233


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecC-CCCCcchhHHHHHHHHH
Q 019064          163 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQ-PGESPLVRVAQVIVVAI  241 (346)
Q Consensus       163 ~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~-p~gs~l~~i~~v~~~a~  241 (346)
                      .+.-.|...|+.+++++++..+.            .++++...++.++..+-+   .+.... ..++|-+....++..++
T Consensus        95 ~laD~f~gry~tI~~~s~i~~~G------------~~~lt~~a~~~~l~p~~~---~~~~~~~~c~~~s~~q~~~~~~~l  159 (571)
T KOG1237|consen   95 FLADSFLGRYFTINIGSLISLLG------------LFGLTLSAMIPALLPFMC---KFKPGGNVCESPSKLQLAVLYGAL  159 (571)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHH------------HHHHHHHHHhhhcCCccc---cCCCCCCcccCcchHHHHHHHHHH
Confidence            46677888999999999986543            444444444443332222   111111 12334455666676676


Q ss_pred             Hhc
Q 019064          242 KNR  244 (346)
Q Consensus       242 ~~~  244 (346)
                      +..
T Consensus       160 ~li  162 (571)
T KOG1237|consen  160 YLI  162 (571)
T ss_pred             HHh
Confidence            654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	346
2xut_A	524	Proton/peptide symporter family protein; transport	3e-49
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	3e-08
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	5e-05

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Length = 524

 Score =  171 bits (436), Expect = 3e-49
 Identities = 53/333 (15%), Positives = 106/333 (31%), Gaps = 38/333 (11%)

Query: 15  RACTFVFVLSALENMGFIANGIS--MVLYFKNEMHFDI------AGASNTLTNFFGSTFL 66
           R   ++    A E   F   G+   +  +    +   I      A A +   +F    + 
Sbjct: 12  RQIPYIIASEACERFSFY--GMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYF 69

Query: 67  LCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAY 126
             L+GG+I+D +  ++ T L    +  +    L I  +S                     
Sbjct: 70  FPLLGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQG------------------ 111

Query: 127 FYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAI 186
           FY  L+L +LG GG +  + +    QFD+++          F+ + F     +     ++
Sbjct: 112 FYTGLFLIALGSGGIKPLVSSFMGDQFDQSNKS---LAQKAFDMFYFTINFGSFFASLSM 168

Query: 187 VYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNRKL 246
             +  + G  + F I  V   +  +   +G+  Y    P          VI  A+  +  
Sbjct: 169 PLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVE 228

Query: 247 SLPDNPEELYEINKIERVGTEERIPHTNQFRCLDKAAIV-------PKDSTAAAPWRVCT 299
              +    L  I  +        IP       L  A ++                 +   
Sbjct: 229 GKGNIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHP 288

Query: 300 VTQVEEVKILARMMPILASTIIMNTCLAQLQTL 332
              V+ V+ + R++ + A      +   Q  + 
Sbjct: 289 DAAVDGVRSVLRILVLFALVTPFWSLFDQKAST 321

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Length = 491

 Score = 54.0 bits (130), Expect = 3e-08
 Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 28/211 (13%)

Query: 15  RACTFVFVLSALENMGFIANGISMVLYF-----KNEMHFDIAGASNTLTNFFGSTFLLCL 69
              + +F+    E   +      ++ Y        ++H   A A++ +  +    +L   
Sbjct: 13  LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGT 72

Query: 70  VGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYG 129
           +GGF++D  +         G L +L  ++L +        P             A+  +G
Sbjct: 73  IGGFVADRIIGARPAVFWGGVLIMLGHIVLAL--------PFG-----------ASALFG 113

Query: 130 SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYV 189
           S+ L  +G G  +  +  L    +DE+D +      + F+ ++F   L A I    +   
Sbjct: 114 SIILIIIGTGFLKPNVSTLVGTLYDEHDRR----RDAGFSIFVFGINLGAFIAPLIVGAA 169

Query: 190 FIDQGWWLGFLISSVATLIGLIALAIGKPFY 220
               G+ + F ++++   IGL+    G    
Sbjct: 170 QEAAGYHVAFSLAAIGMFIGLLVYYFGGKKT 200

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 43.9 bits (104), Expect = 5e-05
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 26/181 (14%)

Query: 38  MVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLS--RFATCLVFGTLEVLS 95
              Y K   HF +  +S     +  +     L+ G++SD      R AT + F TL  ++
Sbjct: 275 SPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 334

Query: 96  LVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDE 155
            ++  +              +      +         +Y  G     G      A     
Sbjct: 335 TIVYWMNP------------AGNPTVDMICMIVIGFLIY--GPVMLIGLHALELA----- 375

Query: 156 NDPKGAKALAS-YFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALA 214
             PK A   A+ +     F     ++     + Y     GW  GF++    +++ +I L 
Sbjct: 376 --PKKAAGTAAGFTGL--FGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 431

Query: 215 I 215
           +
Sbjct: 432 V 432

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	346
2xut_A	524	Proton/peptide symporter family protein; transport	99.89
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.85
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.66
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.59
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.54
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.44
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.31
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.26
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.17
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.07
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.04
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	98.85
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	98.68
2xut_A	524	Proton/peptide symporter family protein; transport	97.82

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.89  E-value=9.1e-23  Score=201.65  Aligned_cols=295  Identities=16%  Similarity=0.237  Sum_probs=204.5

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccC------CchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMH------FDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFAT   84 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg------~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~   84 (346)
                      +.++|.++.+++..+++++++|++...++.|+++++|      ++..+++.+.+.+.....++.+++|+++||++|||++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~   87 (524)
T 2xut_A            8 PKWPRQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNT   87 (524)
T ss_dssp             -----CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHH
T ss_pred             ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence            4567788899999999999999999999999999999      9999999999999999999999999999995599999


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhh
Q 019064           85 CLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKAL  164 (346)
Q Consensus        85 i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~  164 (346)
                      +.++.++..++.+++.++.                  .+.+.+++++++.|+|.|...++..++++|.+++++.   ...
T Consensus        88 ~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r---~~~  146 (524)
T 2xut_A           88 ILWLSLIYCVGHAFLAIFE------------------HSVQGFYTGLFLIALGSGGIKPLVSSFMGDQFDQSNK---SLA  146 (524)
T ss_dssp             HHHHHHHHHHHHHHHHHTS------------------SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTCSTTTT---THH
T ss_pred             HHHHHHHHHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhccccchhHHHHHHHHcCccch---HHH
Confidence            9999999999887776542                  0356788899999999999999999999999996552   224


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccceecCCCCCcchhHHHHHHHHHHhc
Q 019064          165 ASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFYRIQQPGESPLVRVAQVIVVAIKNR  244 (346)
Q Consensus       165 ~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~~~~~p~gs~l~~i~~v~~~a~~~~  244 (346)
                      .+.+++++...++|.++++.+.+++.+..||++.|.+.+++.+++.++++..++++++++|++++..+..+.+..+.|++
T Consensus       147 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (524)
T 2xut_A          147 QKAFDMFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTK  226 (524)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC--------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhh
Confidence            67888899999999999999999999889999999998888777777666665555544555444445555555555554


Q ss_pred             cCCCCCCCchhhhhhh-hcccCCccccCCCC--------------------cccc--ccccccccCCCCCCCCcccCCch
Q 019064          245 KLSLPDNPEELYEINK-IERVGTEERIPHTN--------------------QFRC--LDKAAIVPKDSTAAAPWRVCTVT  301 (346)
Q Consensus       245 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------------~~~~--ld~a~~~~~~~~~~~~w~~~~~~  301 (346)
                      +.+. ++.....+... ....   ....+.+                    +..|  +|+++.            .++++
T Consensus       227 ~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~  290 (524)
T 2xut_A          227 VEGK-GNIGLVLALIGGVSAA---YALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARK------------SHPDA  290 (524)
T ss_dssp             CTTH-HHHHHHHHHHHHHHHH---HTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCC------------SCCSS
T ss_pred             hccc-Cccchhhhhhhhhhhh---hhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhc------------cccHh
Confidence            3210 00000000000 0000   0000000                    0123  333321            13344


Q ss_pred             hHHHHHHHHhHhHHHhhhHHHHHHHhcccchhhhccccccC
Q 019064          302 QVEEVKILARMMPILASTIIMNTCLAQLQTLSDTPQESHSF  342 (346)
Q Consensus       302 ~Ve~vK~~~r~lpi~~~~i~~~~~~~q~~t~~~~Q~~~m~~  342 (346)
                      ++++.|.+++.+++++...+++..+.|..+.+..|+..++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (524)
T 2xut_A          291 AVDGVRSVLRILVLFALVTPFWSLFDQKASTWILQANDMVK  331 (524)
T ss_dssp             SSTTTTTHHHHHHHHTTSHHHHTTTSSTTTHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHhHHhcCC
Confidence            56677888899999999999999999999988888776654

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.85  E-value=4.9e-20  Score=180.42  Aligned_cols=190  Identities=19%  Similarity=0.317  Sum_probs=163.2

Q ss_pred             ccccCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccc-----cCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccch
Q 019064            8 IKQKGGFRACTFVFVLSALENMGFIANGISMVLYFKNE-----MHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRF   82 (346)
Q Consensus         8 ~~~~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~-----lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~   82 (346)
                      +..++++|..+.+++..+++++++|++...++.|++++     +|++..+++.+.+.+.....++.+++|+++||++|||
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r   85 (491)
T 4aps_A            6 KTFFGQPLGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGAR   85 (491)
T ss_dssp             -----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHH
T ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Confidence            34456788999999999999999999999999999988     9999999999999999999999999999999944999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064           83 ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK  162 (346)
Q Consensus        83 ~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~  162 (346)
                      +++.++.++..++.+++.++.                   +.+.+++++++.|+|.|+..++..++++|.+++++.    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~----  142 (491)
T 4aps_A           86 PAVFWGGVLIMLGHIVLALPF-------------------GASALFGSIILIIIGTGFLKPNVSTLVGTLYDEHDR----  142 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCC-------------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTT----
T ss_pred             HHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHHHHHHHhccchHHHHHHHHcCcccc----
Confidence            999999999999987776532                   346788899999999999999999999999997653    


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCccc
Q 019064          163 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPFY  220 (346)
Q Consensus       163 ~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~~  220 (346)
                      .|...+++++...++|..+++.+++++.++.||++.|.+.++..+++.++++...+++
T Consensus       143 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~  200 (491)
T 4aps_A          143 RRDAGFSIFVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKT  200 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cceeeehHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            2577888899999999999999999999999999999998887777776665554443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.66  E-value=5.6e-15  Score=141.82  Aligned_cols=180  Identities=14%  Similarity=0.056  Sum_probs=145.3

Q ss_pred             cCCchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHH
Q 019064           11 KGGFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGT   90 (346)
Q Consensus        11 ~~~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~   90 (346)
                      +.+++....+....++..+.+..+... ..++.+++|.+..+.+.+.+.+.....++.+++|+++||+ |||++++++.+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~   99 (438)
T 3o7q_A           22 RSYIIPFALLCSLFFLWAVANNLNDIL-LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLF   99 (438)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHS-CHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchHHHHHHHH
Confidence            345666677777777777777654444 4457778999999999999999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++.+++......                .+.+.+++++++.|+|.|...+...++++|.+++++      |...+++
T Consensus       100 ~~~~~~~~~~~~~~~----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~  157 (438)
T 3o7q_A          100 LYALGAALFWPAAEI----------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNL  157 (438)
T ss_dssp             HHHHHHHHHHHHHHT----------------TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTT------HHHHHHH
T ss_pred             HHHHHHHHHHhcccc----------------ccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHcCchh------HHHHHHH
Confidence            999998887443221                147888999999999999999999999999998655      5677888


Q ss_pred             HHHHHHHHHHHHHhhhhhhh-hccc-------------------------hhHHHHHHHHHHHHHHHHHH
Q 019064          171 YLFATTLAAMIGVTAIVYVF-IDQG-------------------------WWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~-~~~g-------------------------~~~~f~i~~~~~~~~~~i~~  214 (346)
                      +....++|.++++.+++++. +..+                         |++.|.+.++..++..++++
T Consensus       158 ~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~  227 (438)
T 3o7q_A          158 AQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIM  227 (438)
T ss_dssp             HHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999998887 5544                         89999776665544444433

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.59  E-value=6.7e-15  Score=141.66  Aligned_cols=175  Identities=9%  Similarity=0.025  Sum_probs=142.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      ++.++.+.+..++..+..+.....++.+. +++ .+..+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~  103 (451)
T 1pw4_A           27 WQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAA  103 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhc-CchHHHHHHHHHHH
Confidence            45566666777777777666666666554 567 9999999999999999999999999999996 99999999999999


Q ss_pred             HHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           94 LSLVMLTIQAY-SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        94 ~G~~ll~l~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      ++.+++.+... .+                +.+.+++++++.|+|.+...+...++++|.+++++      |...++++.
T Consensus       104 ~~~~~~~~~~~~~~----------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~  161 (451)
T 1pw4_A          104 AVMLFMGFVPWATS----------------SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWN  161 (451)
T ss_dssp             HHHHHHHHCHHHHS----------------SSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHHHHH
T ss_pred             HHHHHHHhhhhccc----------------cHHHHHHHHHHHHHHhhhccchHHHHHHHHCCchh------hhHHHHHHH
Confidence            99888776210 01                34568888999999999999999999999998543      678888889


Q ss_pred             HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i~  213 (346)
                      ...++|.++++.+++++.+..| |++.|.+.++..++..++.
T Consensus       162 ~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~  203 (451)
T 1pw4_A          162 CAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFA  203 (451)
T ss_dssp             HHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998888888 9999998877665554443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.54  E-value=3.7e-14  Score=133.63  Aligned_cols=167  Identities=11%  Similarity=0.071  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLV   97 (346)
Q Consensus        18 ~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~   97 (346)
                      ..++...++..+........++. +.+++|.+..+.+.+.+.+.....++.++.|+++||+ |||+++.++..+..++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~   80 (375)
T 2gfp_A            3 LMLVLLVAVGQMAQTIYIPAIAD-MARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRV-GRRPVILVGMSIFMLATL   80 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HHTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTS-CCCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHH
Confidence            44556667777777666666665 4567999999999999999999999999999999996 999999999999999888


Q ss_pred             HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHH
Q 019064           98 MLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTL  177 (346)
Q Consensus        98 ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~ni  177 (346)
                      ++....                   +.+.+++++++.+++.+...+...++..|.+++++      |.+.++++....++
T Consensus        81 ~~~~~~-------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  135 (375)
T 2gfp_A           81 VAVTTS-------------------SLTVLIAASAMQGMGTGVGGVMARTLPRDLYERTQ------LRHANSLLNMGILV  135 (375)
T ss_dssp             HHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS------CCSHHHHHHHHHHH
T ss_pred             HHHHhc-------------------cHHHHHHHHHHHHHHHHhhhhhHHHHHHHHCCHHH------HHHHHHHHHHHHHH
Confidence            777653                   46778889999999999999999999999998654      57788888899999


Q ss_pred             HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHH
Q 019064          178 AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLI  211 (346)
Q Consensus       178 G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~  211 (346)
                      |..+++.+.+++.+..||+..|.+.++..++..+
T Consensus       136 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  169 (375)
T 2gfp_A          136 SPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTF  169 (375)
T ss_dssp             HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            9999999999999888999999987776655554

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.44  E-value=2.4e-12  Score=123.67  Aligned_cols=178  Identities=12%  Similarity=0.067  Sum_probs=147.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcc--cchhHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYL--SRFATCLVFGTL   91 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~l--GR~~~i~~~~~l   91 (346)
                      .+..+.+++..++..++++++..+++.|+++.+|++..+++.+...+.+...++.++.|+++|| +  ||++.+.++..+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~-~~~~~~~~~~~~~~~  329 (451)
T 1pw4_A          251 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDK-VFRGNRGATGVFFMT  329 (451)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSTTCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCchhHHHHHHH
Confidence            3677888888999999999999999999999999999999999999999999999999999999 5  899888877766


Q ss_pred             HH-HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           92 EV-LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        92 ~~-~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      .. ++.+++.+.   +              ..+.+.+.+.+++.+++.++..+...++..|.++++.      ++..++.
T Consensus       330 ~~~~~~~~~~~~---~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~  386 (451)
T 1pw4_A          330 LVTIATIVYWMN---P--------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGF  386 (451)
T ss_dssp             HHHHHHHHTTSC---C--------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------HHHHHHH
T ss_pred             HHHHHHHHHHHh---c--------------ccCHHHHHHHHHHHHHHHhchHHHHHHHHHHHhchhh------hhhHHHH
Confidence            65 555444332   1              1135667777888899988888888899999998643      6788888


Q ss_pred             HHHHHHH-HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          171 YLFATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       171 ~y~~~ni-G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      ++...++ |..+++.+.+++.+..||...|.+.+++.+++.++.+.
T Consensus       387 ~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~  432 (451)
T 1pw4_A          387 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV  432 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence            8889999 99999999999999999999999888777766665544

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.31  E-value=4.4e-11  Score=114.45  Aligned_cols=170  Identities=14%  Similarity=0.055  Sum_probs=134.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHH-cccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLY-FKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~y-l~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      .|..+..++..++...+++++..+++.| +++.+|++..+++.....+.....++.+++|+++||+ ||++++.++.++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~  335 (438)
T 3o7q_A          257 IRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIA  335 (438)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHH
Confidence            3567777788888888899999999999 8888899999999999999999999999999999995 9999999998888


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .++.+++....                   +.. ..+.+.+.+++.+...+...++..|.++++       +.....+..
T Consensus       336 ~~~~~~~~~~~-------------------~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  388 (438)
T 3o7q_A          336 MALCLISAFAG-------------------GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIV  388 (438)
T ss_dssp             HHHHHHHHHCC-------------------HHH-HHHHHHHHHHHHTTHHHHHHHHHHSSCGGG-------HHHHHHHHH
T ss_pred             HHHHHHHHHcC-------------------CcH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------ccchhhHHH
Confidence            77766655431                   122 344557788999999999999989998843       122222222


Q ss_pred             HHHHHHHHHHHhhhhhhhhccc-hhHHHHHHHHHHHHHHHH
Q 019064          173 FATTLAAMIGVTAIVYVFIDQG-WWLGFLISSVATLIGLIA  212 (346)
Q Consensus       173 ~~~niG~~i~~~~~~~i~~~~g-~~~~f~i~~~~~~~~~~i  212 (346)
                       ..++|..+++.+.+++.+..| ++.+|.+++++.++..+.
T Consensus       389 -~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~  428 (438)
T 3o7q_A          389 -MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF  428 (438)
T ss_dssp             -HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence             466999999999999999888 999998876665554443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.26  E-value=6.5e-11  Score=115.27  Aligned_cols=151  Identities=14%  Similarity=0.119  Sum_probs=105.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHH
Q 019064           50 IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYG  129 (346)
Q Consensus        50 ~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~  129 (346)
                      ....+++.+.+..+..++++++|+++||+ |||+++.++.+++.++.++...+........... .....-..+.+.+++
T Consensus        54 ~~~~g~~~s~~~~G~~iG~~~~G~laDr~-GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~-~~~~~~a~~~~~l~~  131 (491)
T 4gc0_A           54 NSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISGVGSAWPELGFTSINPDN-TVPVYLAGYVPEFVI  131 (491)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSS-SCCGGGGGCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchh-HHHHHHhhhHHHHHH
Confidence            34456777888889999999999999996 9999999999999999887765321000000000 000000346788999


Q ss_pred             HHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhc--------cchhHHHHH
Q 019064          130 SLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVTAIVYVFID--------QGWWLGFLI  201 (346)
Q Consensus       130 ~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~~~~~i~~~--------~g~~~~f~i  201 (346)
                      ++++.|+|.|+..+..+.+++|..|++.      |.....++..+..+|.+++..+...+...        .+|+..+.+
T Consensus       132 ~R~l~G~g~G~~~~~~~~~i~E~~p~~~------rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (491)
T 4gc0_A          132 YRIIGGIGVGLASMLSPMYIAELAPAHI------RGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFAS  205 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTSCGGG------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCHHh------hhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhh
Confidence            9999999999999999999999998543      56666777777888888777665544332        346666655


Q ss_pred             HHHHHHH
Q 019064          202 SSVATLI  208 (346)
Q Consensus       202 ~~~~~~~  208 (346)
                      ..+..++
T Consensus       206 ~~~~~~~  212 (491)
T 4gc0_A          206 ECIPALL  212 (491)
T ss_dssp             THHHHHH
T ss_pred             hhhhhhh
Confidence            5444333

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.17  E-value=1.2e-10  Score=111.71  Aligned_cols=175  Identities=10%  Similarity=-0.040  Sum_probs=117.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFD---IAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL   91 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s---~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l   91 (346)
                      |..+..++..++....++.....++.|+.+.++..   ....+...........++.+++|+++||+ ||++++.++..+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~l~~~~~~  298 (417)
T 2cfq_A          220 PKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTI  298 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cHHHHHHHHHHH
Confidence            34444444444445566666667888887666532   23334444445556677888999999996 999999888877


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH-
Q 019064           92 EVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF-  170 (346)
Q Consensus        92 ~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~-  170 (346)
                      ..++.+++.+.   +                +.+.+++...+.+++.+...+...++.+|.+|++.      +++.+.+ 
T Consensus       299 ~~~~~~~~~~~---~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~  353 (417)
T 2cfq_A          299 MSVRIIGSSFA---T----------------SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVC  353 (417)
T ss_dssp             HHHHHHHHTTC---C----------------SHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSCHHH------HHHHHHHH
T ss_pred             HHHHHHHHHHh---c----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHH
Confidence            77765444321   1                23445555556666666666667788899988422      4565666 


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHh
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAI  215 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~  215 (346)
                      +....++|+.+++.+.+++.+..|+...|.+.+++.+++.++.+.
T Consensus       354 ~~~~~~lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~  398 (417)
T 2cfq_A          354 FCFFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVF  398 (417)
T ss_dssp             HTTTHHHHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhHHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh
Confidence            355677999999999999988889888998877777666665443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.07  E-value=6.3e-10  Score=108.33  Aligned_cols=186  Identities=9%  Similarity=-0.032  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHH-----HHHH
Q 019064           16 ACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCL-----VFGT   90 (346)
Q Consensus        16 ~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~-----~~~~   90 (346)
                      ..+.+++..++....+......++.|+.+.++.+..+++...........++.++.|+++||+ |||+...     ++..
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~r~~~~~~~~~~~~~  362 (491)
T 4aps_A          284 SYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAW-KKNQPSSPTKFAVGLM  362 (491)
T ss_dssp             THHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHT-TTC---CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHH-hccCCCchHHHHHHHH
Confidence            345555566666777777888889999988888867777777777888888889999999995 9876544     6666


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHH
Q 019064           91 LEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNF  170 (346)
Q Consensus        91 l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~  170 (346)
                      +..++.+++..........          ...+.+.+.+...+.++|.+...+...++..|.+|++.      ++...+.
T Consensus       363 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~  426 (491)
T 4aps_A          363 FAGLSFLLMAIPGALYGTS----------GKVSPLWLVGSWALVILGEMLISPVGLSVTTKLAPKAF------NSQMMSM  426 (491)
T ss_dssp             HHHHHHTTTHHHHHHCCCC----------TTCCTHHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTTC------SSSSTHH
T ss_pred             HHHHHHHHHHHHHHhcCCC----------CCccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHHHHHH
Confidence            6666666555432111000          12245667778888999999999999999999999765      5677777


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHHHhcCcc
Q 019064          171 YLFATTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIALAIGKPF  219 (346)
Q Consensus       171 ~y~~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~~~~~~~  219 (346)
                      ++...++|..+++.+.+++.+ .++...|.+.+++.+++.++++...++
T Consensus       427 ~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  474 (491)
T 4aps_A          427 WFLSSSVGSALNAQLVTLYNA-KSEVAYFSYFGLGSVVLGIVLVFLSKR  474 (491)
T ss_dssp             HHHHHHHHHHHHHHHGGGGGG-SSTTHHHHHTHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888899999999999988876 467777877776666666655554443

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.04  E-value=1e-11  Score=119.37  Aligned_cols=172  Identities=9%  Similarity=-0.054  Sum_probs=110.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHH
Q 019064           14 FRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEV   93 (346)
Q Consensus        14 ~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~   93 (346)
                      .|..+.+....++..+++..+.+.++.|+++++|++..+++.+.+.+.....++.+++|+++||+ |||+++.++..+..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~-Grr~~l~~~~~~~~   84 (417)
T 2cfq_A            6 NTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGML   84 (417)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTS-TTCCHHHHHHHHTT
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHH
Confidence            45666677777777777777888999999999999999999999999999999999999999996 99999998887765


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      ++...+......+..               ...+..++.+.+++.|...+...+...+..++. +   +.+...+.....
T Consensus        85 ~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~---~~~~~~~g~~~~  145 (417)
T 2cfq_A           85 VMFAPFFIFIFGPLL---------------QYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKV-S---RRSNFEFGRARM  145 (417)
T ss_dssp             SCHHHHHHHTHHHHH---------------HTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHH-H---HHHTCCHHHHSS
T ss_pred             HHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh-h---hhcccchHHHHH
Confidence            532211111100000               000122233333333333333333332222111 1   112333444455


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISSVAT  206 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~  206 (346)
                      ..++|..+++.+++++.+ .+|+..|.+.++..
T Consensus       146 ~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~  177 (417)
T 2cfq_A          146 FGCVGWALGASIVGIMFT-INNQFVFWLGSGCA  177 (417)
T ss_dssp             STTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHH
Confidence            678899999999888876 58998887665543

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=98.85  E-value=9e-08  Score=92.89  Aligned_cols=171  Identities=9%  Similarity=-0.081  Sum_probs=108.9

Q ss_pred             HHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhc
Q 019064           25 ALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAY  104 (346)
Q Consensus        25 ~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~  104 (346)
                      +..-.+++.+..+ ..++.+..+.+..+.............++.++++++.||+ |||+.++.+.....++.+.+.....
T Consensus       287 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~-Grr~~~~~~~~~~~~~~~~l~~~~~  364 (491)
T 4gc0_A          287 FQQFVGINVVLYY-APEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY  364 (491)
T ss_dssp             HHHHTCHHHHHHH-HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhHHHhc-chHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhh-cCcchhccchHHHHHHHHHHHHHHh
Confidence            3333344444444 4455556777777777666677778888999999999996 9999999998888887766655432


Q ss_pred             cCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 019064          105 SKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFATTLAAMIGVT  184 (346)
Q Consensus       105 ~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~~niG~~i~~~  184 (346)
                       .. .           ........+.++..+.+ .+..+....+.+|.||.+-      |....++.+...++|+.+++.
T Consensus       365 -~~-~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~E~fPt~~------R~~~~g~~~~~~~~~~~i~~~  424 (491)
T 4gc0_A          365 -TQ-A-----------PGIVALLSMLFYVAAFA-MSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWLANYFVSW  424 (491)
T ss_dssp             -TT-C-----------CHHHHHHHHHHHHHHHH-TTTTHHHHHHHHHSSCTTT------HHHHHHHHHHHHHHHHHHHHT
T ss_pred             -cc-c-----------chHHHHHHHHHHHHHHH-hHHHHHHHHHHHHhCCHhH------HHHHHHHHHHHHHHHHHHHHH
Confidence             11 0           11112222222222222 2334566688899999765      677777777788888888888


Q ss_pred             hhhhhhhc------cchhHHHHHHHHHHHHHHHHHHhcC
Q 019064          185 AIVYVFID------QGWWLGFLISSVATLIGLIALAIGK  217 (346)
Q Consensus       185 ~~~~i~~~------~g~~~~f~i~~~~~~~~~~i~~~~~  217 (346)
                      +.+++.+.      .++...|.+.+++.+++.++.++..
T Consensus       425 ~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~  463 (491)
T 4gc0_A          425 TFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFV  463 (491)
T ss_dssp             HHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhee
Confidence            77776542      3555667776666666665544433

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=98.68  E-value=8.7e-09  Score=96.62  Aligned_cols=164  Identities=9%  Similarity=-0.057  Sum_probs=123.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHH-HH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTL-EV   93 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l-~~   93 (346)
                      |..+..++..++...+++++..+++.|+++.+|++..+++.+.........++.++.|+++||+ || + +..+..+ ..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-~~-~-~~~~~~~~~~  275 (375)
T 2gfp_A          199 SGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-ST-L-MWQSVICCLL  275 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHH-HH-H-HHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-H-HHHHHHHHHH
Confidence            5567777888888999999999999999988999999999999888888889999999999995 77 2 2333322 22


Q ss_pred             HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHH
Q 019064           94 LSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLF  173 (346)
Q Consensus        94 ~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~  173 (346)
                      .+..++..... +              ..+.+.+++...+.+++.+...+...++..|.+| +      .+++.++.+..
T Consensus       276 ~~~~~~~~~~~-~--------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p-~------~~g~~~g~~~~  333 (375)
T 2gfp_A          276 AGLLMWIPDWF-G--------------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-F------LAGTAGALVGG  333 (375)
T ss_dssp             TSSSSSHHHHH-H--------------HHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH-H------HHHHHHHHHHH
T ss_pred             HHHHHHHHhhh-c--------------cccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC-c------ccchHHHHHHH
Confidence            23222111110 0              1145566677888899999999999999999875 2      25778888888


Q ss_pred             HHHHHHHHHHhhhhhhhhccchhHHHHHHH
Q 019064          174 ATTLAAMIGVTAIVYVFIDQGWWLGFLISS  203 (346)
Q Consensus       174 ~~niG~~i~~~~~~~i~~~~g~~~~f~i~~  203 (346)
                      ..++|..+++.+.+++.+..+|...+.+.+
T Consensus       334 ~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~  363 (375)
T 2gfp_A          334 LQNIGSGVLASLSAMLPQTGQGSLGLLMTL  363 (375)
T ss_dssp             HHHHHHHCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCcccHHHHHHH
Confidence            899999999999999888777877776643

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=97.82  E-value=1.3e-05  Score=78.32  Aligned_cols=120  Identities=11%  Similarity=-0.028  Sum_probs=77.5

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhh
Q 019064           83 ATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAK  162 (346)
Q Consensus        83 ~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~  162 (346)
                      +.+.++.++..++.+++.+..   ...+.       ....+.+.+.++.++.++|.+...+...++..|..|++.     
T Consensus       374 ~~~~~g~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p~~~-----  438 (524)
T 2xut_A          374 RKMGAGIAITGLSWIVVGTIQ---LMMDG-------GSALSIFWQILPYALLTFGEVLVSATGLEFAYSQAPKAM-----  438 (524)
T ss_dssp             HHHHTHHHHHHHHHHTTTTTT---TTTTT-------TCCCCSHHHHHHHHHHHHHHHHHHHHHTTTHHHHCCTTC-----
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHhcC-------CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH-----
Confidence            455566666666655544321   10000       001245567778888999999999999999999998654     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhhhhhhhhcc--ch---------hHHHHHHHHHHHHHHHHHHhcCc
Q 019064          163 ALASYFNFYLFATTLAAMIGVTAIVYVFIDQ--GW---------WLGFLISSVATLIGLIALAIGKP  218 (346)
Q Consensus       163 ~~~~~f~~~y~~~niG~~i~~~~~~~i~~~~--g~---------~~~f~i~~~~~~~~~~i~~~~~~  218 (346)
                       ++...++++...++|..+++.+.+++.+..  +|         ...|.+.+++.+++.++++...+
T Consensus       439 -~g~~~g~~~~~~~~g~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (524)
T 2xut_A          439 -KGTIMSFWTLSVTVGNLWVLLANVSVKSPTVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFALYAR  504 (524)
T ss_dssp             -CTTTHHHHGGGHHHHHHHHHHHHHHTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC----
T ss_pred             -HhHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence             577788888889999999999999887632  23         22366666666666555544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	346
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.54
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.34
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.28
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.11

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=2.7e-14  Score=134.31  Aligned_cols=174  Identities=10%  Similarity=0.042  Sum_probs=134.0

Q ss_pred             HHHHHHHHHHHHHHHH---hHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           18 TFVFVLSALENMGFIA---NGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        18 ~~i~~~~~~e~~a~yg---v~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |.++...++-.+.+|.   ....+.++++ ++|++..+.+++.+.+.....++.+++|+++||+ |||+++.++.++..+
T Consensus        24 w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~  101 (447)
T d1pw4a_          24 WQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAA  101 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence            4444444444444443   2345556776 5899999999999999999999999999999996 999999999999999


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +.++.......               ..+.+.+++.+++.+++.|...+...++++|.+++++      |+..++++..+
T Consensus       102 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~  160 (447)
T d1pw4a_         102 VMLFMGFVPWA---------------TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCA  160 (447)
T ss_dssp             HHHHHHHCHHH---------------HSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------HHHHHHHHHHH
T ss_pred             HHhhccccchh---------------hhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhc------ccccccccccc
Confidence            88877664321               1135678889999999999999999999999998543      67788888889


Q ss_pred             HHHHHHHHHhhhhhhhhc-cchhHHHHHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFID-QGWWLGFLISSVATLIGLIALA  214 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~-~g~~~~f~i~~~~~~~~~~i~~  214 (346)
                      .++|.++++.+.+++... .+|++.|.+.++..++..++.+
T Consensus       161 ~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~  201 (447)
T d1pw4a_         161 HNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAF  201 (447)
T ss_dssp             HHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHH
Confidence            999999998887766554 5789888887765554444433

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=4.9e-12  Score=115.73  Aligned_cols=175  Identities=10%  Similarity=-0.047  Sum_probs=114.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHH
Q 019064           15 RACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVL   94 (346)
Q Consensus        15 ~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~   94 (346)
                      |..|.+.+..++..+++....+.++.|+++++|++..+.+.+.+++.....++.++.|+++||+ ||||+++++..+..+
T Consensus         7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~   85 (417)
T d1pv7a_           7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLV   85 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-TTCTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence            5678888888888888888888999999999999999999999999999999999999999996 999999999888888


Q ss_pred             HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHHHH
Q 019064           95 SLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYLFA  174 (346)
Q Consensus        95 G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y~~  174 (346)
                      +..++.+....+               ......++...+.+.+.+...........+..++    +...+..........
T Consensus        86 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  146 (417)
T d1pv7a_          86 MFAPFFIFIFGP---------------LLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEK----VSRRSNFEFGRARMF  146 (417)
T ss_dssp             THHHHHHHTHHH---------------HHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHH----HHHHHSCCHHHHHHH
T ss_pred             HHHHHHHhhhhh---------------hHHHHHHHHHHHhhhcccccccchhhcccccccc----hhhhhHHHHHHHhhh
Confidence            776666543110               0111122223333333333333322222222111    111233344455556


Q ss_pred             HHHHHHHHHhhhhhhhhccchhHHHHHHHHHHHHHH
Q 019064          175 TTLAAMIGVTAIVYVFIDQGWWLGFLISSVATLIGL  210 (346)
Q Consensus       175 ~niG~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~  210 (346)
                      ...+..+++.+.+++.+. +|+..+.+......+..
T Consensus       147 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~  181 (417)
T d1pv7a_         147 GCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILA  181 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHH
T ss_pred             hccccccccccccccccc-cccccccchhhHHHHHH
Confidence            777888888888877764 45555544444333333

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=3.9e-11  Score=112.17  Aligned_cols=180  Identities=12%  Similarity=0.014  Sum_probs=135.7

Q ss_pred             CchHHHHHHHHHHHHHHHHHHhHHHHHHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHH
Q 019064           13 GFRACTFVFVLSALENMGFIANGISMVLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLE   92 (346)
Q Consensus        13 ~~~~~~~i~~~~~~e~~a~ygv~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~   92 (346)
                      ..+..+.+....++.....+++..+++.|+.+.++++..+++.....+.....++.+++|+++||+ +|++.........
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~  325 (447)
T d1pw4a_         247 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFM  325 (447)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCHHHHHHHHH
T ss_pred             cCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhc-cccccccccchhH
Confidence            356778888888999999999999999999999999999999999999999999999999999996 7765444333333


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH
Q 019064           93 VLSLVMLTIQAYSKSLHPPDCGKSSCLKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL  172 (346)
Q Consensus        93 ~~G~~ll~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y  172 (346)
                      .+..+.+.+....+              ..+.+...+.+++.+++.++..+....+..|.++++.      ++...++.+
T Consensus       326 ~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~  385 (447)
T d1pw4a_         326 TLVTIATIVYWMNP--------------AGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTG  385 (447)
T ss_dssp             HHHHHHHHHTTSCC--------------TTCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------HHHHHHHHH
T ss_pred             HHHHHHHHHHHhcc--------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence            22222222211111              2245667777788889988888999999999998543      566777777


Q ss_pred             HHHHH-HHHHHHhhhhhhhhccchhHHHHHHHHHHHHHHHHH
Q 019064          173 FATTL-AAMIGVTAIVYVFIDQGWWLGFLISSVATLIGLIAL  213 (346)
Q Consensus       173 ~~~ni-G~~i~~~~~~~i~~~~g~~~~f~i~~~~~~~~~~i~  213 (346)
                      ...++ |.++++.+.+++.++.||...|.+.+++.+++.++.
T Consensus       386 ~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~  427 (447)
T d1pw4a_         386 LFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILL  427 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence            77777 456678899999999999999887766655555443

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=3.5e-10  Score=103.08  Aligned_cols=152  Identities=11%  Similarity=-0.055  Sum_probs=116.5

Q ss_pred             HHHcccccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 019064           39 VLYFKNEMHFDIAGASNTLTNFFGSTFLLCLVGGFISDTYLSRFATCLVFGTLEVLSLVMLTIQAYSKSLHPPDCGKSSC  118 (346)
Q Consensus        39 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~llgG~laD~~lGR~~~i~~~~~l~~~G~~ll~l~~~~p~~~~~~~~~~~~  118 (346)
                      ..+.....+.+....+...........++.++.+++.||+ ||++++.++..+..++.+++....               
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~---------------  310 (417)
T d1pv7a_         247 FTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTIMSVRIIGSSFAT---------------  310 (417)
T ss_dssp             HTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTCC---------------
T ss_pred             ccccccccccchhhhcccccccccccccchhhhhhhhccc-ccccchhhhHHHHHHhhhcccccc---------------
Confidence            3333334455556666667777788888999999999996 999999999888888776665432               


Q ss_pred             CCchhHHHHHHHHHHHHHhccccccchhhhccCCCCCCChhhhhhhhhHHHHHH-HHHHHHHHHHHhhhhhhhhccchhH
Q 019064          119 LKGAIAAYFYGSLYLYSLGCGGNRGTLPALGAGQFDENDPKGAKALASYFNFYL-FATTLAAMIGVTAIVYVFIDQGWWL  197 (346)
Q Consensus       119 ~~~~~~~~~~~~l~l~~iG~g~~~~~~~a~~adq~~~~~~~~~~~~~~~f~~~y-~~~niG~~i~~~~~~~i~~~~g~~~  197 (346)
                          +.+.+++...+.+++.+...+...++..|.+|++.      +.+.++..+ ....+|..+++.+.+++.++.|++.
T Consensus       311 ----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~~  380 (417)
T d1pv7a_         311 ----SALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQG  380 (417)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             ----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Confidence                35667777888999999999999999999998543      566666654 4567899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhc
Q 019064          198 GFLISSVATLIGLIALAIG  216 (346)
Q Consensus       198 ~f~i~~~~~~~~~~i~~~~  216 (346)
                      .|.+.+++.++..++..+.
T Consensus       381 ~~~~~~~~~~~~~~~~~~~  399 (417)
T d1pv7a_         381 AYLVLGLVALGFTLISVFT  399 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9988777666665554443