Citrus Sinensis ID: 019099
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 346 | ||||||
| 224104535 | 359 | predicted protein [Populus trichocarpa] | 0.976 | 0.941 | 0.657 | 1e-134 | |
| 359487457 | 363 | PREDICTED: protein N-terminal asparagine | 0.988 | 0.942 | 0.677 | 1e-131 | |
| 356525612 | 343 | PREDICTED: protein N-terminal asparagine | 0.985 | 0.994 | 0.658 | 1e-130 | |
| 297741220 | 339 | unnamed protein product [Vitis vinifera] | 0.919 | 0.938 | 0.693 | 1e-127 | |
| 449463783 | 347 | PREDICTED: protein N-terminal asparagine | 0.985 | 0.982 | 0.633 | 1e-126 | |
| 147768910 | 375 | hypothetical protein VITISV_024457 [Viti | 0.953 | 0.88 | 0.648 | 1e-123 | |
| 357451021 | 384 | Protein N-terminal asparagine amidohydro | 0.921 | 0.830 | 0.641 | 1e-121 | |
| 297824457 | 348 | N-terminal asparagine amidohydrolase fam | 0.994 | 0.988 | 0.614 | 1e-119 | |
| 18406532 | 347 | protein N-terminal asparagine amidohydro | 0.991 | 0.988 | 0.614 | 1e-118 | |
| 21554202 | 347 | unknown [Arabidopsis thaliana] | 0.991 | 0.988 | 0.611 | 1e-117 |
| >gi|224104535|ref|XP_002313470.1| predicted protein [Populus trichocarpa] gi|222849878|gb|EEE87425.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/345 (65%), Positives = 280/345 (81%), Gaps = 7/345 (2%)
Query: 1 MIFVGGLPFSTNNSSWSSSSSQGSDILVALLEHPVLVSASHSFKSMEETKVSVSSETPSP 60
MIFV GL F T+ SSQ LV LLEHP LVSAS+SF++M+E K+S S E
Sbjct: 1 MIFVDGLTFPTD-------SSQERGALVTLLEHPKLVSASNSFEAMQEVKLSASKEYALQ 53
Query: 61 SKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLCQ 120
++VYVFQRE+ATVDPAL+D++GTDEATTCVGLVIRN+RN MTS+AHMD+ ++VDIGL Q
Sbjct: 54 GRWVYVFQREFATVDPALIDFIGTDEATTCVGLVIRNQRNGMTSVAHMDSTKVVDIGLAQ 113
Query: 121 MLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRR 180
MLS+VVD + D +LDV+LIGGF+D P ANG+T SE + DGYS PLC K+++ L++
Sbjct: 114 MLSIVVDKNFDDDLDVHLIGGFEDVLPKQANGSTRSETQAKGDGYSFPLCTKIIENLRKG 173
Query: 181 QEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRIR 240
+EKFH+QTL VLGHNTKRDSQGNAYP+F+GFLV+T TGS+ PASFD T+RCPDE+VRRIR
Sbjct: 174 KEKFHIQTLFVLGHNTKRDSQGNAYPVFNGFLVKTSTGSVIPASFDRTTRCPDEIVRRIR 233
Query: 241 VTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRRCSTSPS 300
+++S ED +WNGKLLETYDTQ DRFVIAPC WT ++H+ ++LQ LSDEEIL CSTSPS
Sbjct: 234 ISASNEDPTWNGKLLETYDTQNDRFVIAPCSWTFWQVHVALTLQDLSDEEILLECSTSPS 293
Query: 301 AEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRR 345
AEGP+FV+NLRRQW+YLIK+P W TFP + PRVF+ ADG W+R
Sbjct: 294 AEGPEFVDNLRRQWDYLIKQPLWNLTFPTRHPRVFEWTADGSWKR 338
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487457|ref|XP_002268254.2| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356525612|ref|XP_003531418.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297741220|emb|CBI32171.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449463783|ref|XP_004149611.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] gi|449526561|ref|XP_004170282.1| PREDICTED: protein N-terminal asparagine amidohydrolase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|147768910|emb|CAN75884.1| hypothetical protein VITISV_024457 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357451021|ref|XP_003595787.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] gi|355484835|gb|AES66038.1| Protein N-terminal asparagine amidohydrolase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|297824457|ref|XP_002880111.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] gi|297325950|gb|EFH56370.1| N-terminal asparagine amidohydrolase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18406532|ref|NP_566017.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] gi|20197192|gb|AAC16088.2| expressed protein [Arabidopsis thaliana] gi|26450109|dbj|BAC42174.1| unknown protein [Arabidopsis thaliana] gi|28827584|gb|AAO50636.1| unknown protein [Arabidopsis thaliana] gi|330255324|gb|AEC10418.1| protein N-terminal asparagine amidohydrolase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21554202|gb|AAM63281.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 346 | ||||||
| TAIR|locus:2050549 | 347 | AT2G44420 "AT2G44420" [Arabido | 0.991 | 0.988 | 0.597 | 6.4e-115 | |
| UNIPROTKB|Q28955 | 310 | NTAN1 "Protein N-terminal aspa | 0.589 | 0.658 | 0.305 | 6.6e-18 | |
| ZFIN|ZDB-GENE-040426-1896 | 306 | zgc:77869 "zgc:77869" [Danio r | 0.482 | 0.545 | 0.331 | 9.9e-18 | |
| RGD|1305160 | 309 | Ntan1 "N-terminal asparagine a | 0.505 | 0.566 | 0.308 | 8e-17 | |
| UNIPROTKB|D4A5M3 | 309 | Ntan1 "Protein Ntan1" [Rattus | 0.505 | 0.566 | 0.308 | 8e-17 | |
| UNIPROTKB|E9PTV5 | 309 | Ntan1 "Protein Ntan1" [Rattus | 0.505 | 0.566 | 0.308 | 8e-17 | |
| UNIPROTKB|E1B891 | 310 | NTAN1 "Uncharacterized protein | 0.586 | 0.654 | 0.295 | 1.2e-16 | |
| MGI|MGI:108471 | 310 | Ntan1 "N-terminal Asn amidase" | 0.505 | 0.564 | 0.308 | 7.2e-16 | |
| UNIPROTKB|Q96AB6 | 310 | NTAN1 "Protein N-terminal aspa | 0.505 | 0.564 | 0.303 | 1.4e-15 | |
| UNIPROTKB|F1PPS3 | 313 | NTAN1 "Uncharacterized protein | 0.586 | 0.648 | 0.290 | 3.1e-15 |
| TAIR|locus:2050549 AT2G44420 "AT2G44420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1133 (403.9 bits), Expect = 6.4e-115, P = 6.4e-115
Identities = 209/350 (59%), Positives = 270/350 (77%)
Query: 1 MIFVGGLPFXXXXXXXXXXXXXX-XDILVALLEHPVLVSASHSFKSMEETKVSVS---SE 56
MI+VGG+ F +LV ++ HPV+ AS SFK++EE VS SE
Sbjct: 1 MIYVGGVQFLDESSSFSLSSSSQGSSLLVDVMSHPVITLASDSFKNLEEKNVSFDESDSE 60
Query: 57 TPSPSKYVYVFQREYATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDI 116
+ + +YVY+FQRE+A V+PALVD+VGTDEATTCVGLVIRNR++ MTS+AHMD+PEIVD+
Sbjct: 61 SSTKDRYVYIFQREFAVVNPALVDFVGTDEATTCVGLVIRNRKSGMTSVAHMDSPEIVDL 120
Query: 117 GLCQMLSLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDT 176
G+ QML LV+ D+DAELDV+++GG++D +A+G + + Y+ +GYS PLC KLV+T
Sbjct: 121 GISQMLLLVLQDDVDAELDVHMVGGYEDVDIKNADG--VGD-YAKPEGYSFPLCCKLVET 177
Query: 177 LQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMV 236
LQ+R+E FH+QTL +LGHNTK DSQ N PIF+G LV T TG++ PASF+ TSRCPDE+V
Sbjct: 178 LQKRRENFHIQTLFILGHNTKLDSQANTCPIFNGCLVNTSTGAILPASFNRTSRCPDEIV 237
Query: 237 RRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRKLHIVMSLQQLSDEEILRRCS 296
RRIRV+SS+ED+SW GKLL+TYDT+TDRF+IAPCRWT+R + V L QL+DEEIL CS
Sbjct: 238 RRIRVSSSFEDSSWKGKLLDTYDTKTDRFIIAPCRWTMRLIEYVWELNQLTDEEILTNCS 297
Query: 297 TSPSAEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRRC 346
TSPSAEGPDFV +LRR W YL+K P+W +TFP +QPRVF+R DG W++C
Sbjct: 298 TSPSAEGPDFVNSLRRNWGYLLKYPEWSKTFPRRQPRVFERTVDGHWKKC 347
|
|
| UNIPROTKB|Q28955 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-1896 zgc:77869 "zgc:77869" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|1305160 Ntan1 "N-terminal asparagine amidase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D4A5M3 Ntan1 "Protein Ntan1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PTV5 Ntan1 "Protein Ntan1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1B891 NTAN1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:108471 Ntan1 "N-terminal Asn amidase" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q96AB6 NTAN1 "Protein N-terminal asparagine amidohydrolase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PPS3 NTAN1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_LG_IX1324 | hypothetical protein (359 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 346 | |||
| PF14736 | 274 | N_Asn_amidohyd: Protein N-terminal asparagine amid | 100.0 | |
| PRK13498 | 167 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.04 | |
| PRK13490 | 162 | chemoreceptor glutamine deamidase CheD; Provisiona | 96.01 | |
| PRK13489 | 233 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.75 | |
| PRK13493 | 213 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.65 | |
| PRK13488 | 157 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.64 | |
| PRK13491 | 199 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.55 | |
| PRK13495 | 159 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.54 | |
| COG1871 | 164 | CheD Chemotaxis protein; stimulates methylation of | 95.42 | |
| PRK13494 | 163 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.36 | |
| PRK13497 | 184 | chemoreceptor glutamine deamidase CheD; Provisiona | 95.3 | |
| PRK13487 | 201 | chemoreceptor glutamine deamidase CheD; Provisiona | 94.97 |
| >PF14736 N_Asn_amidohyd: Protein N-terminal asparagine amidohydrolase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-112 Score=805.98 Aligned_cols=269 Identities=41% Similarity=0.680 Sum_probs=260.5
Q ss_pred hhccccceeeccCCCCCCCCceEEEecceeEeecCC--ceeeeccCCCceeeeEEEeecCCCceEEEeccCcchhhHHHH
Q 019099 42 SFKSMEETKVSVSSETPSPSKYVYVFQREYATVDPA--LVDYVGTDEATTCVGLVIRNRRNRMTSIAHMDNPEIVDIGLC 119 (346)
Q Consensus 42 ~l~~~p~~~v~~~~~~~~~~~~LYV~QrE~A~~~P~--~v~~lGSDdATTC~ivVlRh~~sG~t~laH~Dgs~~v~~~v~ 119 (346)
+|.++|.+.++ |+|+|||+|||||||+|+ +|+|||||||||||||||||++|||||||||||+++ +++|+
T Consensus 1 ~~~s~~~~~~~-------~~~~lYV~QrE~A~~~p~d~~v~~lGSDdATTC~ivVlRh~~sg~t~laH~Dgs~~-~~~v~ 72 (274)
T PF14736_consen 1 QFRSQPHKVVG-------PKGLLYVQQREFATTTPADKSVSILGSDDATTCHIVVLRHTGSGATCLAHLDGSDT-EEGVA 72 (274)
T ss_pred CcccCCceecC-------CCeeEEEecceeEEecCccCccceEecCCCcEEEEEEEEcCCCCcEEEEEecCCCh-hhHHH
Confidence 58899999999 999999999999999999 699999999999999999999999999999999996 99999
Q ss_pred HHHHhhc---CCCCCceeeEEEecccCCCCCCCCCCCcccccccCCCCCcHHHHHHHHHHHHcccccEEEeeeeeccCCC
Q 019099 120 QMLSLVV---DHDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNT 196 (346)
Q Consensus 120 ~ml~~l~---~~~~~~~levhLVGGF~D~~~~~~~~~~~~~~~~~~~g~S~~L~~~lL~~~~~~~~~~hL~t~CV~~~Nt 196 (346)
+||+++. ..+.+++|||||||||.|+ +|||++|+.+||++||+++++|||+||||+++||
T Consensus 73 ~ml~~v~~~~~~~~~~~lelhLVGGF~D~-----------------~~~S~~l~~~ll~~f~~~~~~~~L~t~Cv~~~Nt 135 (274)
T PF14736_consen 73 QMLSSVQSLSNGYPEGRLELHLVGGFDDD-----------------RGYSQKLSLNLLEAFHKQPEEIHLRTFCVTELNT 135 (274)
T ss_pred HHHHHHHhhccCCCCCceEEEEEccccCc-----------------ccchHHHHHHHHHHHHcCcceEEEEEEEEccCCC
Confidence 9999964 4568999999999999999 8999999999999999999999999999999999
Q ss_pred cccCCCCCcceEEEEEEEecCCeeecccCCCCCCCchHHHHHhhhhccccccCCCCeeeeeeeCCCCeEEeccccccccc
Q 019099 197 KRDSQGNAYPIFHGFLVETCTGSLSPASFDGTSRCPDEMVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVRK 276 (346)
Q Consensus 197 ~~~~~g~~~Pii~Gi~VnvkTG~ifPAsF~~~~RGP~e~lR~aR~~~~~~~~~~gg~l~~iYD~~~~~l~I~Pf~w~p~~ 276 (346)
+++ +|++|||||||+||+|||+||||+| ++|||+|+||+||+++ |+|+|+||||+++++|+|+||+|+|++
T Consensus 136 ~~~-~g~~~Pii~Gi~VnvkTG~IfpAsF--~~rGP~~~lR~aR~~~------~~~~l~~iYD~~~~~l~I~Pf~~~p~~ 206 (274)
T PF14736_consen 136 RVE-DGIHRPIIYGIAVNVKTGEIFPASF--PDRGPDEILRSARVFT------GGGRLLNIYDTETDQLRIGPFHWRPFP 206 (274)
T ss_pred ccC-CCccCcEEEEEEEEecCCeEecccC--cccCCcHHHHHHHHhc------CCCceEEEEECCCCeEEECCCcCCCcc
Confidence 887 5999999999999999999999999 9999999999999995 799999999999999999999999996
Q ss_pred hhhhhhhccCCHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHhCCCCCCcCCCCCCceEEeCCCCCeeeC
Q 019099 277 LHIVMSLQQLSDEEILRRCSTSPSAEGPDFVENLRRQWNYLIKRPDWRETFPWKQPRVFQRAADGGWRRC 346 (346)
Q Consensus 277 ~~i~~~L~~~sD~~iL~~~STSP~aEpPhFv~~iR~~l~fl~~hP~~~~~Fp~~~P~~y~r~~~G~W~~~ 346 (346)
++++|| +|||++|||+|||||+|||||||++||++|+||++||+|+++||+|||++|+|++||+|+||
T Consensus 207 -~~~~~l-~~~D~~iL~~lSTSP~aEpp~Fv~~ir~~l~fl~~hP~p~~~Fp~~~p~~y~r~~~G~W~~~ 274 (274)
T PF14736_consen 207 -HADFWL-SQSDSEILQYLSTSPEAEPPHFVEHIRSTLRFLQEHPDPDTLFPDNQPRVYRRDEDGRWERV 274 (274)
T ss_pred -ChHHHh-hCCHHHHHHhcCCCcCCCCchHHHHHHHHHHHHHHCCCHHHhCCCCCceEEEECCCCCEEeC
Confidence 899999 89999999999999999999999999999999999999999999999999999999999996
|
|
| >PRK13498 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13490 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13489 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13493 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13488 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13491 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13495 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >COG1871 CheD Chemotaxis protein; stimulates methylation of MCP proteins [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13494 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13497 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
| >PRK13487 chemoreceptor glutamine deamidase CheD; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 346 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 6e-04
Identities = 41/320 (12%), Positives = 83/320 (25%), Gaps = 79/320 (24%)
Query: 49 TKVSVSSETPSPSKYVYVFQRE--YATVDPALVDYVGTDEATTCVGLVIRNRRNRMTSIA 106
+ + PS +Y+ QR+ Y V + R + +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP-------YLKLRQALLELR 148
Query: 107 HMDNPEIVDIGLCQML-----SLVVDHDLDAELDVYLIGGFDDASPNHANGTTISECYSD 161
N + + +L + LDV L + C S
Sbjct: 149 PAKN-----VLIDGVLGSGKTWVA--------LDVCLSYKVQCKMDFKIFWLNLKNCNSP 195
Query: 162 MDGYSL--PLCRKLVDTLQRRQEKFH--VQTLHVLGHNTKRDSQGNAYPIFHGFLV--ET 215
+ L ++ R + +H + +R + Y + LV
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE--NCLLVLLNV 253
Query: 216 CTGSLSPASFDGTSRCPDEMVRRIRVTSSYEDTSWNGKLLETYDTQTDRFVIAPCRWTVR 275
A F+ C +I +T T Q F+ A +
Sbjct: 254 QNAKAWNA-FNL--SC------KILLT--------------TRFKQVTDFLSAATTTHIS 290
Query: 276 KLHIVMSLQQLSDEEILRR-------------CSTSPSAEG--PDFVENLRRQWNYLIKR 320
H M+L + +L + +T+P + + + W+
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN---- 346
Query: 321 PDWRETFPWKQPRVFQRAAD 340
W+ K + + + +
Sbjct: 347 --WKHVNCDKLTTIIESSLN 364
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 346 | |||
| 2f9z_C | 159 | Protein (chemotaxis methylation protein); bacteria | 95.96 |
| >2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.033 Score=49.06 Aligned_cols=131 Identities=16% Similarity=0.174 Sum_probs=88.5
Q ss_pred ceEEEecceeEeec-CC-ceee-eccCCCceeeeEEEeecCCCceEEEecc---Cc-------chhhHHHHHHHHhh-cC
Q 019099 62 KYVYVFQREYATVD-PA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMD---NP-------EIVDIGLCQMLSLV-VD 127 (346)
Q Consensus 62 ~~LYV~QrE~A~~~-P~-~v~~-lGSDdATTC~ivVlRh~~sG~t~laH~D---gs-------~~v~~~v~~ml~~l-~~ 127 (346)
..++|.++|+.++. |. -..+ ||| |+.|+|+++..+.-.++|+= .+ ...+.++..|++.+ ..
T Consensus 3 ~~i~v~~Ge~~v~~~p~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~am~~Li~~m~~~ 77 (159)
T 2f9z_C 3 MKKVIGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKM 77 (159)
T ss_dssp CEEECCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCeEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCCcccCHHHHHHHHHHHHHHc
Confidence 45789999999884 55 3556 887 99999999999999999983 21 23567889999885 44
Q ss_pred CCCCceeeEEEecccCCCCCCCCCCCcccccccCCCCCcHHHHHHHHHHHHcccccEEEeeeeeccCCCcccCCCCCcce
Q 019099 128 HDLDAELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPI 207 (346)
Q Consensus 128 ~~~~~~levhLVGGF~D~~~~~~~~~~~~~~~~~~~g~S~~L~~~lL~~~~~~~~~~hL~t~CV~~~Nt~~~~~g~~~Pi 207 (346)
+..-.+|++.|.||=.=-... ..........-..+.|.+....+ .--=+++. ++.
T Consensus 78 Ga~~~~L~aKifGGA~m~~~~-------------~~~IG~rNv~~a~~~L~~~gI~i--~aeD~GG~----------~gR 132 (159)
T 2f9z_C 78 GAKVERLEAKIAGGASMFESK-------------GMNIGARNVEAVKKHLKDFGIKL--LAEDTGGN----------RAR 132 (159)
T ss_dssp TCCGGGCEEEEEECCCCSCCC-------------SSCHHHHHHHHHHHHHHHTTCCE--EEEEECCS----------SCE
T ss_pred CCCHHHEEEEEEeCcccCccc-------------ccChHHHHHHHHHHHHHHCCCcE--EEEeCCCC----------CCc
Confidence 556789999999995532100 02456667777777777665443 33223322 221
Q ss_pred EEEEEEEecCCeeeccc
Q 019099 208 FHGFLVETCTGSLSPAS 224 (346)
Q Consensus 208 i~Gi~VnvkTG~ifPAs 224 (346)
=+-+++.||++.=-+
T Consensus 133 --~i~f~~~tG~v~vk~ 147 (159)
T 2f9z_C 133 --SVEYNIETGKLLVRK 147 (159)
T ss_dssp --EEEEETTTTEEEEEC
T ss_pred --EEEEECCCCEEEEEE
Confidence 255688888876443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 346 | |||
| d2f9zc1 | 157 | Chemoreceptor glutamine deamidase CheD {Thermotoga | 95.06 |
| >d2f9zc1 d.194.1.3 (C:1-157) Chemoreceptor glutamine deamidase CheD {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: CNF1/YfiH-like putative cysteine hydrolases superfamily: CNF1/YfiH-like putative cysteine hydrolases family: CheD-like domain: Chemoreceptor glutamine deamidase CheD species: Thermotoga maritima [TaxId: 2336]
Probab=95.06 E-value=0.036 Score=46.60 Aligned_cols=127 Identities=17% Similarity=0.234 Sum_probs=90.0
Q ss_pred EecceeEee-cCC-ceee-eccCCCceeeeEEEeecCCCceEEEeccCc----------chhhHHHHHHHHhh-cCCCCC
Q 019099 66 VFQREYATV-DPA-LVDY-VGTDEATTCVGLVIRNRRNRMTSIAHMDNP----------EIVDIGLCQMLSLV-VDHDLD 131 (346)
Q Consensus 66 V~QrE~A~~-~P~-~v~~-lGSDdATTC~ivVlRh~~sG~t~laH~Dgs----------~~v~~~v~~ml~~l-~~~~~~ 131 (346)
|.++||+++ .|. -+.+ ||| |+.|+|.++..+.-.++|+==| ...+.++..|++.+ ..+...
T Consensus 5 vgiGe~~v~~~~~~i~T~~LGS-----CVav~l~Dp~~~iGGm~H~mLP~~~~~~~~~~rY~d~ai~~Li~~m~~~Ga~~ 79 (157)
T d2f9zc1 5 IGIGEYAVMKNPGVIVTLGLGS-----CVAVCMRDPVAKVGAMAHVMLPDSGGKTDKPGKYADTAVKTLVEELKKMGAKV 79 (157)
T ss_dssp CCTTCEEEEETTCEEEEEEESS-----CEEEEEEETTTTEEEEEEECBSCCSSCCSCGGGBHHHHHHHHHHHHHTTTCCG
T ss_pred EEeccEEEECCCCEEEEecCcC-----eEEEEEEcCCCCEEEEEEEECCCCCCCCCchhhHHHHHHHHHHHHHHHcCCCh
Confidence 678999998 566 3565 887 9999999999999999998221 22578999999886 455568
Q ss_pred ceeeEEEecccCCCCCCCCCCCcccccccCCCCCcHHHHHHHHHHHHcccccEEEeeeeeccCCCcccCCCCCcceEEEE
Q 019099 132 AELDVYLIGGFDDASPNHANGTTISECYSDMDGYSLPLCRKLVDTLQRRQEKFHVQTLHVLGHNTKRDSQGNAYPIFHGF 211 (346)
Q Consensus 132 ~~levhLVGGF~D~~~~~~~~~~~~~~~~~~~g~S~~L~~~lL~~~~~~~~~~hL~t~CV~~~Nt~~~~~g~~~Pii~Gi 211 (346)
.+|++.|.||=.=-. +. .....++...-.++.|++.. |.+.---|++..-+ =+
T Consensus 80 ~~l~aKifGGA~m~~-----~~--------~~~IG~rNv~~a~~~L~~~g--I~i~a~dvGG~~gR------------~i 132 (157)
T d2f9zc1 80 ERLEAKIAGGASMFE-----SK--------GMNIGARNVEAVKKHLKDFG--IKLLAEDTGGNRAR------------SV 132 (157)
T ss_dssp GGCEEEEEECCCCSC-----CC--------SSCHHHHHHHHHHHHHHHTT--CCEEEEEECCSSCE------------EE
T ss_pred HHeEEEEecCeeccC-----CC--------CCCcHHHHHHHHHHHHHHCC--CcEEEEECCCCCCc------------EE
Confidence 899999999965321 00 13566777777788887765 44555556655443 36
Q ss_pred EEEecCCeeeccc
Q 019099 212 LVETCTGSLSPAS 224 (346)
Q Consensus 212 ~VnvkTG~ifPAs 224 (346)
.+++.||+++=-+
T Consensus 133 ~f~~~tG~v~vk~ 145 (157)
T d2f9zc1 133 EYNIETGKLLVRK 145 (157)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEECCCCEEEEEE
Confidence 6788888876433
|