Citrus Sinensis ID: 019162

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccEEEccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEHHHHHcccEEEEEEEEcEEccccccccccccccEEEEEEcccEEEEEEccccccccccEEEEEEEEEEEEcccccccccEEEEccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEEccccEEEEccccccccccEEEEcccccccccccccccEEEEEEEEccccccHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEEEEHHHHHcccEEEEEEcccEEccccccccccccccccEEEEccccccEEEcccccccccccEEEEEEEEEEEEccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEEHHHHHccccEEEccccccEEEEEEccccccccEEEEcccccccccccccccEEEEEEEEccccccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MAHRRARLLFLLCALCYALNVIAGKSYYEvlqvprgasdEQIKRAYRKLALkyhpdknqgneEANKRFAEINNAyevlsdsetrniydtygeeglkqhaagggrgggmgvNIQDIFssffgggpmeedekivkgdDVIVELDATLEdlymggslkvwreknvikpapgkrrcncrnevyhkqigpgmFQQMTEQVCDQCQnvkyeregYFVTVDIEkgmqdgqevvfyedgepkidgepgdlkfrirtaphdrfrregnnlhTTVTVTLVQALVGFEKTIEHLDEHLVDistkgitkpkevrkfggegmplhfsnkkgdlyITFEvlfpttltedQKTRIKEVLG
Flexible Loop (DISEMBL)
MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLAlkyhpdknqgneEANKRFAEINNayevlsdsetRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLymggslkvwreknvikpapgkrrcncRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDgepkidgepgdlkFRIRTAPhdrfrregnnlhttVTVTLVQALVGFEKTIEHLdehlvdistkgitkpkevRKFGGEGMPLHFSNKKGDLYITFEVlfpttltedqktrikevlg
Low Complexity Region (SEG)
MAHrrarllfllcalcyalNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAgggrgggmgVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNlhttvtvtlvqalvGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Disordered region (IsUnstruct)
*****ARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKY****************EINNAYEVLSD*ETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYED***********LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLT************
Disordered Region (DISOPRED)
****RAR*LFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE*****************VNIQDIF************************LDATLEDLYMGGSLKVWREKNVIK*****************QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVV*********DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Disordered Region (DISEMBL)
MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Disordered Region (DISPRO)
**HRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGP*******VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGxxxxxxxxxxxxxxxxxxxxxETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
Q6TUG0	358	DnaJ homolog subfamily B	yes	no	0.942	0.907	0.492	5e-80
Q99KV1	358	DnaJ homolog subfamily B	yes	no	0.942	0.907	0.492	6e-80
Q5RAJ6	358	DnaJ homolog subfamily B	yes	no	0.942	0.907	0.484	4e-79
Q9UBS4	358	DnaJ homolog subfamily B	yes	no	0.942	0.907	0.484	4e-79
Q3ZBA6	358	DnaJ homolog subfamily B	yes	no	0.942	0.907	0.478	2e-78
P81999	358	DnaJ homolog subfamily B	yes	no	0.910	0.877	0.485	2e-77
Q8MPX3	355	DnaJ homolog dnj-20 OS=Ca	yes	no	0.965	0.938	0.436	2e-66
Q626I7	382	DnaJ homolog dnj-20 OS=Ca	N/A	no	0.965	0.871	0.402	6e-59
Q8WW22	397	DnaJ homolog subfamily A	no	no	0.855	0.743	0.377	1e-47
Q2HJ94	412	DnaJ homolog subfamily A	no	no	0.907	0.759	0.356	2e-47

>sp|Q6TUG0|DJB11_RAT DnaJ homolog subfamily B member 11 OS=Rattus norvegicus GN=Dnajb11 PE=2 SV=1

 Score =  298 bits (763), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 170/345 (49%), Positives = 220/345 (63%), Gaps = 20/345 (5%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
           F L  L     VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F 
Sbjct: 9   FCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQ 68

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFG 121
           ++  AYEVLSDSE R  YDTYGEEGLK  H +  G          DIFS         FG
Sbjct: 69  DLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFG 118

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHK 181
           G P ++D  I +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   
Sbjct: 119 GAPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTT 178

Query: 182 QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGD 241
           Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGD
Sbjct: 179 QLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD 238

Query: 242 LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301
           L+FRI+   H  F R G++L+T VTV+LV+ALVGFE  I HLD H V IS   IT+P   
Sbjct: 239 LRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAK 298

Query: 302 RKFGGEGMP-LHFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
               GEG+P    +N KG L ITF+V FP   LTE+ K  IK++L
Sbjct: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.
Rattus norvegicus (taxid: 10116)

>sp|Q99KV1|DJB11_MOUSE DnaJ homolog subfamily B member 11 OS=Mus musculus GN=Dnajb11 PE=1 SV=1

 Score =  297 bits (761), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 170/345 (49%), Positives = 220/345 (63%), Gaps = 20/345 (5%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
           F L  L     VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F 
Sbjct: 9   FCLLLLYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQ 68

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFG 121
           ++  AYEVLSDSE R  YDTYGEEGLK  H +  G          DIFS         FG
Sbjct: 69  DLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFG 118

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHK 181
           G P ++D  I +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   
Sbjct: 119 GTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTT 178

Query: 182 QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGD 241
           Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGD
Sbjct: 179 QLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD 238

Query: 242 LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301
           L+FRI+   H  F R G++L+T VTV+LV+ALVGFE  I HLD H V IS   IT+P   
Sbjct: 239 LRFRIKVVKHRIFERRGDDLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAK 298

Query: 302 RKFGGEGMP-LHFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
               GEG+P    +N KG L ITF+V FP   LTE+ K  IK++L
Sbjct: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAKEGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.

Mus musculus (taxid: 10090)

>sp|Q5RAJ6|DJB11_PONAB DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1

 Score =  295 bits (755), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 167/345 (48%), Positives = 220/345 (63%), Gaps = 20/345 (5%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
           F L  L     VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F 
Sbjct: 9   FCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQ 68

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFG 121
           ++  AYEVLSDSE R  YDTYGEEGLK  H +  G          DIFS         FG
Sbjct: 69  DLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFG 118

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHK 181
           G P ++D  I +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   
Sbjct: 119 GTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTT 178

Query: 182 QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGD 241
           Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGD
Sbjct: 179 QLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD 238

Query: 242 LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301
           L+FRI+   H  F R G++L+T VT++LV++LVGFE  I HLD H V IS   IT+P   
Sbjct: 239 LRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAK 298

Query: 302 RKFGGEGMP-LHFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
               GEG+P    +N KG L ITF+V FP   LTE+ +  IK++L
Sbjct: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.

Pongo abelii (taxid: 9601)

>sp|Q9UBS4|DJB11_HUMAN DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1

 Score =  295 bits (755), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 167/345 (48%), Positives = 220/345 (63%), Gaps = 20/345 (5%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
           F L  L     VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F 
Sbjct: 9   FCLLLLYLIGAVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQ 68

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFG 121
           ++  AYEVLSDSE R  YDTYGEEGLK  H +  G          DIFS         FG
Sbjct: 69  DLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFG 118

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHK 181
           G P ++D  I +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   
Sbjct: 119 GTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTT 178

Query: 182 QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGD 241
           Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGD
Sbjct: 179 QLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD 238

Query: 242 LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301
           L+FRI+   H  F R G++L+T VT++LV++LVGFE  I HLD H V IS   IT+P   
Sbjct: 239 LRFRIKVVKHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAK 298

Query: 302 RKFGGEGMP-LHFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
               GEG+P    +N KG L ITF+V FP   LTE+ +  IK++L
Sbjct: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.

Homo sapiens (taxid: 9606)

>sp|Q3ZBA6|DJB11_BOVIN DnaJ homolog subfamily B member 11 OS=Bos taurus GN=DNAJB11 PE=2 SV=1

 Score =  293 bits (749), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/345 (47%), Positives = 219/345 (63%), Gaps = 20/345 (5%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
           F L  L     VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F 
Sbjct: 9   FCLLLLYLIGTVIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQ 68

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFG 121
           ++  AYEVLSDSE R  YDTYGEEGLK  H +  G          DIFS         FG
Sbjct: 69  DLGAAYEVLSDSEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFG 118

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHK 181
           G P ++D  I +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   
Sbjct: 119 GTPRQQDRNIPRGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTT 178

Query: 182 QIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGD 241
           Q+GPG FQ   E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGD
Sbjct: 179 QLGPGRFQMTQEVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGD 238

Query: 242 LKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV 301
           L+FRI+   H  F R G++L+T VT++LV++LVGF+  I HLD H V IS   IT+P   
Sbjct: 239 LRFRIKVVKHSIFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAK 298

Query: 302 RKFGGEGMP-LHFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
               GEG+P    +N KG L ITF+V FP   L+E+ +  IK++L
Sbjct: 299 LWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLSEEAREGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.

Bos taurus (taxid: 9913)

>sp|P81999|DJB11_CANFA DnaJ homolog subfamily B member 11 OS=Canis familiaris GN=DNAJB11 PE=1 SV=2

 Score =  289 bits (740), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 162/334 (48%), Positives = 215/334 (64%), Gaps = 20/334 (5%)

Query: 21  VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
            IAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSD
Sbjct: 20  AIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSD 79

Query: 81  SETRNIYDTYGEEGLKQ-HAAGGGRGGGMGVNIQDIFS-------SFFGGGPMEEDEKIV 132
           SE R  YDTYGEEGLK  H +  G          DIFS         FGG P ++D  I 
Sbjct: 80  SEKRKQYDTYGEEGLKDGHQSSHG----------DIFSHFFGDFGFMFGGTPRQQDRNIP 129

Query: 133 KGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMT 192
           +G D+IV+L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   
Sbjct: 130 RGSDIIVDLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQ 189

Query: 193 EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD 252
           E VCD+C NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H 
Sbjct: 190 EVVCDECPNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHP 249

Query: 253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-L 311
            F R G++L+T VT++LV++LVGF+  I HLD H V IS   IT+P       GEG+P  
Sbjct: 250 IFERRGDDLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLPNF 309

Query: 312 HFSNKKGDLYITFEVLFPT-TLTEDQKTRIKEVL 344
             +N KG L ITF+V FP   LTE+ +  IK++L
Sbjct: 310 DNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLL 343

Serves as a co-chaperone for HSPA5. Binds directly to both unfolded proteins that are substrates for ERAD and nascent unfolded peptide chains, but dissociates from the HSPA5-unfolded protein complex before folding is completed. May help recruiting HSPA5 and other chaperones to the substrate. Stimulates HSPA5 ATPase activity.

Canis familiaris (taxid: 9615)

>sp|Q8MPX3|DNJ20_CAEEL DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=4 SV=2

 Score =  253 bits (645), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/337 (43%), Positives = 216/337 (64%), Gaps = 4/337 (1%)

Query: 10  FLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFA 69
            L+ A      V  G+ +Y++L V + A+  QIK+AYRKLA + HPD+NQ +E AN++F 
Sbjct: 8   LLVLASSLVAFVECGRDFYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQ 67

Query: 70  EINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDE 129
           ++++AYEVLSD E R +YD +GEEG+ +   GGG G     +    F    GGG    +E
Sbjct: 68  DLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFSSFFGDFFG--GGGGHGGEE 125

Query: 130 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQ 189
              KG DV ++L  TLE++Y G  +++ R+K V K   G R+CNCR+E+  +Q+G G FQ
Sbjct: 126 GTPKGADVTIDLFVTLEEVYNGHFVEIKRKKAVYKQTSGTRQCNCRHEMRTEQMGQGRFQ 185

Query: 190 QMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTA 249
               +VCD+C NVK  +E   + V++E G  +G + +F+ +GEP I+G+PGDLKF+IR  
Sbjct: 186 MFQVKVCDECPNVKLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQ 245

Query: 250 PHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGM 309
            H RF R+G++L+T VT++L  AL GFE  I+HLD H+V +    +T P    +   EGM
Sbjct: 246 KHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGHIVKVQRDKVTWPGARLRKKDEGM 305

Query: 310 P-LHFSNKKGDLYITFEVLFPTT-LTEDQKTRIKEVL 344
           P L  +NKKG L +TF+V FP T L+++QK +I E+L
Sbjct: 306 PSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEIL 342

Caenorhabditis elegans (taxid: 6239)

>sp|Q626I7|DNJ20_CAEBR DnaJ homolog dnj-20 OS=Caenorhabditis briggsae GN=dnj-20 PE=4 SV=1

 Score =  228 bits (581), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 147/365 (40%), Positives = 211/365 (57%), Gaps = 32/365 (8%)

Query: 9   LFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRF 68
           L +L A      V  G+ +Y++L V + A+  QIK+AYRK A + HPD+N  +E AN++F
Sbjct: 8   LLVLTAFLVDF-VECGRDFYKILGVSKNANANQIKKAYRKQAKELHPDRNPDDEMANEKF 66

Query: 69  AEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEED 128
            +++ AYEVLSD E R +YD +GEEG+ +   GGG G     +    F    GGG    D
Sbjct: 67  QDLSAAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFSSFFGDFFG--GGGGNGGD 124

Query: 129 EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMF 188
           E   KG DV ++L  TLE+ Y G  +++ R+K V K   G R+CNCR+E+  +Q+G G F
Sbjct: 125 EGTPKGADVTIDLFVTLEEAYNGHFVEIKRKKAVYKQTSGTRQCNCRHEMRTEQMGQGRF 184

Query: 189 QQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRT 248
           Q    +VCD+C NVK  +E   + V++E G  +G   +F+ +GEP I+G+PGDLKF+IR 
Sbjct: 185 QMFQVKVCDECPNVKLVQENKVLEVEVEVGADEGHTQIFHGEGEPHIEGDPGDLKFKIRI 244

Query: 249 APHD---------------------------RFRREGNNLHTTVTVTLVQALVGFEKTIE 281
             H                            RF R+G++L+T VT++L  AL GFE  I 
Sbjct: 245 QKHPRFLISVTGIEIIELKVDELVELLLEGIRFERKGDDLYTNVTISLQDALNGFEMEIL 304

Query: 282 HLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFPTT-LTEDQKTR 339
           HLD H+V +    +T P    +   EGMP +  +NKKG L +TF+V FP T LT++QK +
Sbjct: 305 HLDGHMVKVQRDKVTWPGARLRKKDEGMPSMENNNKKGMLIVTFDVEFPKTELTDEQKAQ 364

Query: 340 IKEVL 344
           I E+L
Sbjct: 365 IIEIL 369

Caenorhabditis briggsae (taxid: 6238)

>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1

 Score =  190 bits (483), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 195/334 (58%), Gaps = 39/334 (11%)

Query: 26  SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85
            YY++L V   AS E+IK+AYRKLALKYHPDKN    +  ++F  I+ AYEVLSD + R+
Sbjct: 6   QYYDILGVKPSASPEEIKKAYRKLALKYHPDKN---PDEGEKFKLISQAYEVLSDPKKRD 62

Query: 86  IYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATL 145
           +YD  GE+ +K+  +G         +  DIF  FFGGG     E+  +G +V+ +L  TL
Sbjct: 63  VYDQGGEQAIKEGGSGSP----SFSSPMDIFDMFFGGGGRMARER--RGKNVVHQLSVTL 116

Query: 146 EDLYMGGSLKVWREKNVI----KPAPGKR----RCN-CRN---EVYHKQIGPGMFQQMT- 192
           EDLY G + K+  +KNVI    +   GK+    +C  C+    +++ +QIGPGM QQ+  
Sbjct: 117 EDLYNGVTKKLALQKNVICEKCEGVGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQT 176

Query: 193 ---------EQV-----CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGE 238
                    E++     C+ C   K  RE   + V +EKGM+DGQ+++F+ +G+ + + E
Sbjct: 177 VCIECKGQGERINPKDRCESCSGAKVIREKKIIEVHVEKGMKDGQKILFHGEGDQEPELE 236

Query: 239 PGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKG--IT 296
           PGD+   +    H  F+R G++L   + + L +AL GF+KTI+ LD  ++ I++K   + 
Sbjct: 237 PGDVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVI 296

Query: 297 KPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFP 329
           K  ++R    EGMP++ +  +KG L I F V+FP
Sbjct: 297 KHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFP 330

Homo sapiens (taxid: 9606)

>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1

 Score =  189 bits (481), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/362 (35%), Positives = 196/362 (54%), Gaps = 49/362 (13%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           +A    Y++L VP GAS+ ++K+AYRKLA +YHPDKN     A  +F EI+ AYEVLS+ 
Sbjct: 4   VADTKLYDILGVPPGASENELKKAYRKLAKEYHPDKN---PNAGDKFKEISFAYEVLSNP 60

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPME-------EDEKIVKG 134
           E R +YD YGE+GL++ +         G  + DIFS  FGGG                +G
Sbjct: 61  EKRELYDRYGEQGLREGSG-------GGGGMDDIFSHIFGGGLFSFMGNQSRSRNGRRRG 113

Query: 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAP----GK----RRCN-CRNE---VYHKQ 182
           +D++  L  +LEDLY G + K+   KNV+  A     GK    ++C+ CR     +  +Q
Sbjct: 114 EDMMHPLKVSLEDLYNGKTTKLQLSKNVLCSACSGQGGKSGAVQKCSACRGRGVRIMIRQ 173

Query: 183 IGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227
           + PGM QQM                   C +C+  K  +E   + V ++KGM+ GQ + F
Sbjct: 174 LAPGMVQQMQSVCSDCNGEGEVINEKDRCKKCEGKKVIKEVKILEVHVDKGMKHGQRITF 233

Query: 228 YEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD--E 285
             + +     EPGD+   ++   H+ F+R+GN+LH T  + LV+AL GF+ T +HLD  +
Sbjct: 234 TGEADQAPGVEPGDIVLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQ 293

Query: 286 HLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTT--LTEDQKTRIKE 342
            +V      + +P  VR   GEGMP + +  +KGDLYI F+V FP    +  D+ + +++
Sbjct: 294 IVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELED 353

Query: 343 VL 344
           +L
Sbjct: 354 LL 355

Co-chaperone of Hsc70.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
356505618	343	PREDICTED: dnaJ homolog subfamily B memb	0.994	1.0	0.852	1e-175
356572775	343	PREDICTED: dnaJ homolog subfamily B memb	0.994	1.0	0.849	1e-173
225437515	345	PREDICTED: dnaJ homolog subfamily B memb	0.997	0.997	0.867	1e-173
224064488	345	predicted protein [Populus trichocarpa]	0.982	0.982	0.877	1e-172
224131018	349	predicted protein [Populus trichocarpa]	0.994	0.982	0.878	1e-171
255548499	345	Chaperone protein dnaJ, putative [Ricinu	1.0	1.0	0.886	1e-169
449436439	344	PREDICTED: dnaJ homolog subfamily B memb	0.994	0.997	0.829	1e-167
357511325	344	DnaJ homolog subfamily B member [Medicag	0.994	0.997	0.843	1e-160
297821166	346	DNAJ heat shock family protein [Arabidop	1.0	0.997	0.797	1e-160
15228802	346	DNAJ heat shock family protein [Arabidop	1.0	0.997	0.791	1e-159

>gi|356505618|ref|XP_003521587.1| PREDICTED: dnaJ homolog subfamily B member 11-like [Glycine max]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/345 (85%), Positives = 322/345 (93%), Gaps = 2/345 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MA R A LLFLLCALCY+L  IAGKSYY++LQ+ +GASDEQIKRAYRKLALKYHPDKN G
Sbjct: 1   MAPRGATLLFLLCALCYSLIAIAGKSYYDILQLSKGASDEQIKRAYRKLALKYHPDKNPG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEANK+FAEI+NAYEVLSDSE RNIYD YGEEGLKQHAA GGRGGGM  N QDIFS+FF
Sbjct: 61  NEEANKKFAEISNAYEVLSDSEKRNIYDRYGEEGLKQHAASGGRGGGM--NFQDIFSTFF 118

Query: 121 GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 180
           GGGPMEE+EKIVKGDD++V+LDATLEDLYMGG+LKVWREKNV+KPAPGKRRCNCRNEVYH
Sbjct: 119 GGGPMEEEEKIVKGDDLVVDLDATLEDLYMGGTLKVWREKNVLKPAPGKRRCNCRNEVYH 178

Query: 181 KQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPG 240
           KQIGPGMFQQMTEQVC+QC NVKY REGYF+TVDIEKGMQDGQEV+FYEDGEP IDGE G
Sbjct: 179 KQIGPGMFQQMTEQVCEQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESG 238

Query: 241 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKE 300
           DL+FRIRTAPHD FRREGN+LH+TVT+TLVQALVGFEKTI+HLDEHLVDISTK ITKPK+
Sbjct: 239 DLRFRIRTAPHDVFRREGNDLHSTVTITLVQALVGFEKTIKHLDEHLVDISTKEITKPKQ 298

Query: 301 VRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           VRKF GEGMPLH SNKKGDLY+TFEVLFPT+L E+QKT+IK +LG
Sbjct: 299 VRKFKGEGMPLHMSNKKGDLYVTFEVLFPTSLREEQKTKIKAILG 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572775|ref|XP_003554541.1| PREDICTED: dnaJ homolog subfamily B member 11-like [Glycine max]

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 293/345 (84%), Positives = 319/345 (92%), Gaps = 2/345 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MAHR A L FLL A+CY+L  IAGKSYY++LQ+ +GASDEQIKRAYRKLALKYHPDKN G
Sbjct: 1   MAHRGATLFFLLFAICYSLIAIAGKSYYDILQLSKGASDEQIKRAYRKLALKYHPDKNPG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEANK+FAEI+NAYEVLSDSE RNIYD YGEEGLKQHAA GGRGGGM  N QDIF SFF
Sbjct: 61  NEEANKKFAEISNAYEVLSDSEKRNIYDRYGEEGLKQHAASGGRGGGM--NFQDIFGSFF 118

Query: 121 GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 180
           GGG MEE+EKIVKGDDV+V+LDATLEDLYMGG+LKVWREKNV+KPA GKRRCNCRNEVYH
Sbjct: 119 GGGQMEEEEKIVKGDDVVVDLDATLEDLYMGGTLKVWREKNVLKPASGKRRCNCRNEVYH 178

Query: 181 KQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPG 240
           KQIGPGMFQQMTEQVC+QC NVKY REGYF+TVDIEKGMQDGQEV+FYEDGEP IDGE G
Sbjct: 179 KQIGPGMFQQMTEQVCEQCPNVKYVREGYFITVDIEKGMQDGQEVLFYEDGEPIIDGESG 238

Query: 241 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKE 300
           DL+FRIRTAPHD FRREGN+LHTTVT+TLVQALVGFEKTI+HLDEHLVDISTK ITKPK+
Sbjct: 239 DLRFRIRTAPHDVFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISTKEITKPKQ 298

Query: 301 VRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           VRKF GEGMPLH SNKKGDLY+TFEVLFPT+LTE+QKT+IK +LG
Sbjct: 299 VRKFKGEGMPLHMSNKKGDLYVTFEVLFPTSLTEEQKTKIKAILG 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437515|ref|XP_002275221.1| PREDICTED: dnaJ homolog subfamily B member 11 [Vitis vinifera] gi|147769615|emb|CAN72389.1| hypothetical protein VITISV_040417 [Vitis vinifera] gi|297743958|emb|CBI36928.3| unnamed protein product [Vitis vinifera]

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 300/346 (86%), Positives = 328/346 (94%), Gaps = 2/346 (0%)

Query: 1   MAHRR-ARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ 59
           MA+RR A LLFLLC L  A+  IAGKSYY+VLQVP+GASDEQIKRAYRKLALKYHPDKNQ
Sbjct: 1   MANRRIAILLFLLCGLASAITSIAGKSYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQ 60

Query: 60  GNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSF 119
           GNEEANK+FAEINNAYEVLSD+E RNIYD YGEEGLKQHAA GGRGGG  +NIQDIFSSF
Sbjct: 61  GNEEANKKFAEINNAYEVLSDNEKRNIYDRYGEEGLKQHAASGGRGGGG-MNIQDIFSSF 119

Query: 120 FGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVY 179
           FGGGP EE+E+IV+GDDVIVELDATLEDLYMGGSLKVWREKNV+KPAPGKRRCNCRNEVY
Sbjct: 120 FGGGPAEEEERIVRGDDVIVELDATLEDLYMGGSLKVWREKNVLKPAPGKRRCNCRNEVY 179

Query: 180 HKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP 239
           HKQIGPGMFQQMTEQVC+QC NVKYEREGYF+TVDIEKGMQDGQEVVFY+DGEP +DGEP
Sbjct: 180 HKQIGPGMFQQMTEQVCEQCPNVKYEREGYFITVDIEKGMQDGQEVVFYDDGEPIVDGEP 239

Query: 240 GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPK 299
           GDLKFRIRTAPHD+FRREGN+LHTTVT+TLVQALVGFEKTI+HLDEHLV+I +KGITKPK
Sbjct: 240 GDLKFRIRTAPHDQFRREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVNIGSKGITKPK 299

Query: 300 EVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           EVRKF GEGMPLHFS KKGDLY+TFEVLFP++LTE+QKT+I+E+LG
Sbjct: 300 EVRKFKGEGMPLHFSTKKGDLYVTFEVLFPSSLTEEQKTKIQEILG 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064488|ref|XP_002301501.1| predicted protein [Populus trichocarpa] gi|222843227|gb|EEE80774.1| predicted protein [Populus trichocarpa]

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 300/342 (87%), Positives = 320/342 (93%), Gaps = 3/342 (0%)

Query: 7   RLLFLLCALC---YALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE 63
           +LLFLLC +    YAL  IAGKSYYEVLQVP+GASDEQIKRAYRKLALKYHPDKNQGNEE
Sbjct: 4   KLLFLLCVVALSHYALVAIAGKSYYEVLQVPKGASDEQIKRAYRKLALKYHPDKNQGNEE 63

Query: 64  ANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGG 123
           AN RFAEI+NAYEVLSDSE RNIYD +GEEGLKQH A GGRGGG G+N QDIFS FFGGG
Sbjct: 64  ANLRFAEISNAYEVLSDSEKRNIYDRHGEEGLKQHMASGGRGGGGGMNFQDIFSQFFGGG 123

Query: 124 PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQI 183
            MEE+EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQI
Sbjct: 124 QMEEEEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQI 183

Query: 184 GPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLK 243
           GPGMFQQMTEQVC+QCQNVK+EREGYF+TVDIEKGMQDGQEVVFYEDGEP IDGEPGDLK
Sbjct: 184 GPGMFQQMTEQVCEQCQNVKHEREGYFLTVDIEKGMQDGQEVVFYEDGEPIIDGEPGDLK 243

Query: 244 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRK 303
           FRIRTAPHD FRREGN+LHTTVT+TLVQALVGF+KT++HLDEHLVDIS+KGITKPKEVR+
Sbjct: 244 FRIRTAPHDVFRREGNDLHTTVTITLVQALVGFKKTVKHLDEHLVDISSKGITKPKEVRR 303

Query: 304 FGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           F GEGMPLHFS K GDLYITFEVLFP +L+EDQKT+IKEVLG
Sbjct: 304 FKGEGMPLHFSTKNGDLYITFEVLFPASLSEDQKTKIKEVLG 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131018|ref|XP_002320981.1| predicted protein [Populus trichocarpa] gi|118486904|gb|ABK95286.1| unknown [Populus trichocarpa] gi|222861754|gb|EEE99296.1| predicted protein [Populus trichocarpa]

 Score =  606 bits (1562), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 303/345 (87%), Positives = 319/345 (92%), Gaps = 2/345 (0%)

Query: 3   HRRARLLFLLCALC--YALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           HRR++LL LLC     YA+  IAGKSYYEVLQVP+GASDEQIK+AYRKLALKYHPDKNQG
Sbjct: 5   HRRSKLLLLLCVALSYYAIIAIAGKSYYEVLQVPKGASDEQIKKAYRKLALKYHPDKNQG 64

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEAN RFAEINNAYEVLSDSE RNIYD YGEEGLKQH A GGRGGG G+N QDIFS FF
Sbjct: 65  NEEANLRFAEINNAYEVLSDSEKRNIYDRYGEEGLKQHMASGGRGGGGGMNFQDIFSQFF 124

Query: 121 GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 180
           GGG MEE+EKI +GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH
Sbjct: 125 GGGSMEEEEKIARGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 184

Query: 181 KQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPG 240
           KQIGPGMFQQMTEQVC+QCQNVKYEREGYF+TVDIEKGMQDGQEVVFYEDGEP IDGEPG
Sbjct: 185 KQIGPGMFQQMTEQVCEQCQNVKYEREGYFLTVDIEKGMQDGQEVVFYEDGEPIIDGEPG 244

Query: 241 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKE 300
           DLKFRIRTAPHD FRREGN+LHTTVT+TLVQALV FEK IEHLDEHLVDIS+KGITKPKE
Sbjct: 245 DLKFRIRTAPHDIFRREGNDLHTTVTITLVQALVSFEKNIEHLDEHLVDISSKGITKPKE 304

Query: 301 VRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           VR+F GEGMPLHFS K GDLY+TFEVLFPT+LTEDQK RIKEVLG
Sbjct: 305 VRRFKGEGMPLHFSTKNGDLYVTFEVLFPTSLTEDQKKRIKEVLG 349

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548499|ref|XP_002515306.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|223545786|gb|EEF47290.1| Chaperone protein dnaJ, putative [Ricinus communis]

 Score =  600 bits (1548), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 306/345 (88%), Positives = 326/345 (94%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MA+R+A+LLFLLCAL Y L+VI+ KSYY+VLQVP+ ASDEQIKRAYRKLALKYHPDKN G
Sbjct: 1   MAYRKAKLLFLLCALSYVLSVISAKSYYDVLQVPKSASDEQIKRAYRKLALKYHPDKNPG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEANKRFAEINNAYEVLSDSE RNIYD YGEEG+KQH AGGGRGGGMG+NIQD+FS F 
Sbjct: 61  NEEANKRFAEINNAYEVLSDSEKRNIYDRYGEEGIKQHMAGGGRGGGMGMNIQDLFSFFG 120

Query: 121 GGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 180
           GGG MEE+EKIVKGDDVIV+LDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH
Sbjct: 121 GGGSMEEEEKIVKGDDVIVDLDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYH 180

Query: 181 KQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPG 240
           KQIGPGMFQQMTEQVC+QCQNVK+EREGYFVTVDIEKGMQDGQEVVFYEDGEP IDGEPG
Sbjct: 181 KQIGPGMFQQMTEQVCEQCQNVKFEREGYFVTVDIEKGMQDGQEVVFYEDGEPIIDGEPG 240

Query: 241 DLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKE 300
           DLKFRIRTA HDRFRREGN+L TTVT+TLVQALVGFEKTI+HLDEHLVDI TKGITKPKE
Sbjct: 241 DLKFRIRTAAHDRFRREGNDLRTTVTITLVQALVGFEKTIKHLDEHLVDIGTKGITKPKE 300

Query: 301 VRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           VRKF GEGMPLHFS KKGDLY+TFEVLFPT+LTEDQKT+IK  LG
Sbjct: 301 VRKFKGEGMPLHFSTKKGDLYVTFEVLFPTSLTEDQKTKIKATLG 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436439|ref|XP_004136000.1| PREDICTED: dnaJ homolog subfamily B member 11-like [Cucumis sativus] gi|449507850|ref|XP_004163147.1| PREDICTED: dnaJ homolog subfamily B member 11-like [Cucumis sativus]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 287/346 (82%), Positives = 318/346 (91%), Gaps = 3/346 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MAHRR +LLF++CALCY L+ IAGKSYY++LQV +GASD+QIKRAYRKLALKYHPDKNQG
Sbjct: 1   MAHRRTKLLFVVCALCYVLSAIAGKSYYDILQVQKGASDDQIKRAYRKLALKYHPDKNQG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEANKRFAEI+NAYEVLSD E RNIYD YGEEGLKQHAA GGRGGGM  NIQDIFS FF
Sbjct: 61  NEEANKRFAEISNAYEVLSDGEKRNIYDRYGEEGLKQHAASGGRGGGM--NIQDIFSQFF 118

Query: 121 GGGPMEEDE-KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVY 179
           GGG   E+E KI KGDDVIVELDA+LEDLYMGGSL+VWREKN++KPAPGKRRCNCRNEVY
Sbjct: 119 GGGGGMEEEEKIPKGDDVIVELDASLEDLYMGGSLRVWREKNILKPAPGKRRCNCRNEVY 178

Query: 180 HKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP 239
           HKQIGPGMFQQMTEQVC+QC NVK+EREGYFVTVDIEKGMQDGQEV FYEDGEP IDGE 
Sbjct: 179 HKQIGPGMFQQMTEQVCEQCPNVKFEREGYFVTVDIEKGMQDGQEVTFYEDGEPMIDGEA 238

Query: 240 GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPK 299
           GDL+FRI TAPHD FRR+GN+LH T+T+TLVQALVGFEK+++HLDEHLV+I TKGITKPK
Sbjct: 239 GDLRFRIHTAPHDVFRRDGNDLHATITITLVQALVGFEKSLKHLDEHLVEIGTKGITKPK 298

Query: 300 EVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           EVRKF GEGMPLHFS KKGDLY+T+EVLFPT+LTEDQK  I+++LG
Sbjct: 299 EVRKFKGEGMPLHFSTKKGDLYVTYEVLFPTSLTEDQKASIQKILG 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511325|ref|XP_003625951.1| DnaJ homolog subfamily B member [Medicago truncatula] gi|355500966|gb|AES82169.1| DnaJ homolog subfamily B member [Medicago truncatula] gi|388502852|gb|AFK39492.1| unknown [Medicago truncatula]

 Score =  570 bits (1470), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 292/346 (84%), Positives = 324/346 (93%), Gaps = 3/346 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MAH+RA+LL LLCALCY+L+ IA KSYY++LQV +GASD+QIKRAYRKLALKYHPDKN G
Sbjct: 1   MAHQRAKLLLLLCALCYSLSAIAVKSYYDILQVSKGASDDQIKRAYRKLALKYHPDKNPG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
           NEEANK+FAEI+NAYEVLSD+E RNIYD YGEEGLKQHAAGGGRGGGM  N+QDIF+SFF
Sbjct: 61  NEEANKKFAEISNAYEVLSDNEKRNIYDKYGEEGLKQHAAGGGRGGGM--NMQDIFNSFF 118

Query: 121 GGGPMEEDE-KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVY 179
           GGG MEE+E KI KGDDVIV+LDATLEDLYMGGSLKVWREKNV+KPAPGKRRCNCRNEVY
Sbjct: 119 GGGSMEEEEEKIAKGDDVIVDLDATLEDLYMGGSLKVWREKNVVKPAPGKRRCNCRNEVY 178

Query: 180 HKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP 239
           H+QIGPGMFQQMTEQVCDQC NVKY REGYFVTVDIEKGM+DGQEV+FYEDGEP IDGE 
Sbjct: 179 HRQIGPGMFQQMTEQVCDQCANVKYVREGYFVTVDIEKGMKDGQEVLFYEDGEPIIDGES 238

Query: 240 GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPK 299
           GDL+FRIRTAPH+ F+REGN+LHTTVT+TLVQALVGFEKTI+HLDEHLVDIS+KGIT PK
Sbjct: 239 GDLRFRIRTAPHELFKREGNDLHTTVTITLVQALVGFEKTIKHLDEHLVDISSKGITNPK 298

Query: 300 EVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           +VRKF GEGMPLH S KKGDLY+TFEVLFPTTL+E+QKT+IK +LG
Sbjct: 299 QVRKFKGEGMPLHTSTKKGDLYVTFEVLFPTTLSEEQKTKIKSILG 344

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821166|ref|XP_002878466.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] gi|297324304|gb|EFH54725.1| DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/346 (79%), Positives = 315/346 (91%), Gaps = 1/346 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MA R + L  +L AL YA+ V+AGKSYY+VLQVP+GASDEQIKRAYRKLALKYHPDKNQG
Sbjct: 1   MAIRWSELCIVLFALSYAICVLAGKSYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMG-VNIQDIFSSF 119
           NEEA ++FAEINNAYEVLSD E R IY+ YGEEGLKQ +A GGRGGG G +N+QDIFSSF
Sbjct: 61  NEEATRKFAEINNAYEVLSDEEKREIYNKYGEEGLKQFSANGGRGGGGGGMNMQDIFSSF 120

Query: 120 FGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVY 179
           FGGG MEE+EK+VKGDDVIVEL+ATLEDLYMGGS+KVWREKNVIKPAPGKR+CNCRNEVY
Sbjct: 121 FGGGSMEEEEKVVKGDDVIVELEATLEDLYMGGSIKVWREKNVIKPAPGKRKCNCRNEVY 180

Query: 180 HKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP 239
           H+QIGPGMFQQMTEQVCD+C NVKYEREGYFVTVDIEKGM+DG+EV FYEDGEP +DGEP
Sbjct: 181 HRQIGPGMFQQMTEQVCDKCPNVKYEREGYFVTVDIEKGMKDGEEVSFYEDGEPILDGEP 240

Query: 240 GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPK 299
           GDLKFRIRTAPH RFRR+GN+LH TV +TLV+ALVGFEK+ +HLD+H VDIS+KGITKPK
Sbjct: 241 GDLKFRIRTAPHARFRRDGNDLHMTVNITLVEALVGFEKSFKHLDDHEVDISSKGITKPK 300

Query: 300 EVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           EV+KF GEGMPLH+S KKG+L++TFEVLFP++LT+DQK +IKEV  
Sbjct: 301 EVKKFKGEGMPLHYSTKKGNLFVTFEVLFPSSLTDDQKKKIKEVFA 346

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228802|ref|NP_191819.1| DNAJ heat shock family protein [Arabidopsis thaliana] gi|7362740|emb|CAB83110.1| putative protein [Arabidopsis thaliana] gi|20453120|gb|AAM19802.1| AT3g62600/F26K9_30 [Arabidopsis thaliana] gi|21593230|gb|AAM65179.1| unknown [Arabidopsis thaliana] gi|21928031|gb|AAM78044.1| At3g62600/F26K9_30 [Arabidopsis thaliana] gi|332646847|gb|AEE80368.1| DNAJ heat shock family protein [Arabidopsis thaliana]

 Score =  566 bits (1459), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/346 (79%), Positives = 314/346 (90%), Gaps = 1/346 (0%)

Query: 1   MAHRRARLLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG 60
           MA R + L  +L AL YA+ V+AGKSYY+VLQVP+GASDEQIKRAYRKLALKYHPDKNQG
Sbjct: 1   MAIRWSELCIVLFALSYAICVLAGKSYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQG 60

Query: 61  NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMG-VNIQDIFSSF 119
           NEEA ++FAEINNAYEVLSD E R IY+ YGEEGLKQ +A GGRGGG G +N+QDIFSSF
Sbjct: 61  NEEATRKFAEINNAYEVLSDEEKREIYNKYGEEGLKQFSANGGRGGGGGGMNMQDIFSSF 120

Query: 120 FGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVY 179
           FGGG MEE+EK+VKGDDVIVEL+ATLEDLYMGGS+KVWREKNVIKPAPGKR+CNCRNEVY
Sbjct: 121 FGGGSMEEEEKVVKGDDVIVELEATLEDLYMGGSMKVWREKNVIKPAPGKRKCNCRNEVY 180

Query: 180 HKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP 239
           H+QIGPGMFQQMTEQVCD+C NVKYEREGYFVTVDIEKGM+DG+EV FYEDGEP +DG+P
Sbjct: 181 HRQIGPGMFQQMTEQVCDKCPNVKYEREGYFVTVDIEKGMKDGEEVSFYEDGEPILDGDP 240

Query: 240 GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPK 299
           GDLKFRIRTAPH RFRR+GN+LH  V +TLV+ALVGFEK+ +HLD+H VDIS+KGITKPK
Sbjct: 241 GDLKFRIRTAPHARFRRDGNDLHMNVNITLVEALVGFEKSFKHLDDHEVDISSKGITKPK 300

Query: 300 EVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           EV+KF GEGMPLH+S KKG+L++TFEVLFP++LT+DQK +IKEV  
Sbjct: 301 EVKKFKGEGMPLHYSTKKGNLFVTFEVLFPSSLTDDQKKKIKEVFA 346

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
TAIR|locus:2081725	346	ATERDJ3B [Arabidopsis thaliana	0.936	0.933	0.768	2.2e-137
RGD|1307373	358	Dnajb11 "DnaJ (Hsp40) homolog,	0.927	0.893	0.472	3.6e-73
MGI|MGI:1915088	358	Dnajb11 "DnaJ (Hsp40) homolog,	0.927	0.893	0.472	5.9e-73
UNIPROTKB|Q9UBS4	358	DNAJB11 "DnaJ homolog subfamil	0.927	0.893	0.469	9.6e-73
UNIPROTKB|F1SFJ8	358	DNAJB11 "Uncharacterized prote	0.927	0.893	0.466	3.2e-72
UNIPROTKB|Q3ZBA6	358	DNAJB11 "DnaJ homolog subfamil	0.927	0.893	0.463	6.7e-72
UNIPROTKB|P81999	358	DNAJB11 "DnaJ homolog subfamil	0.924	0.891	0.464	8.6e-72
UNIPROTKB|F1NVY5	364	DNAJB11 "Uncharacterized prote	0.921	0.873	0.453	1.3e-70
UNIPROTKB|F1PXX5	358	DNAJB11 "DnaJ homolog subfamil	0.915	0.882	0.459	2.6e-70
ZFIN|ZDB-GENE-031113-9	360	dnajb11 "DnaJ (Hsp40) homolog,	0.927	0.888	0.448	2.4e-67

TAIR|locus:2081725 ATERDJ3B [Arabidopsis thaliana (taxid:3702)]

 Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
 Identities = 249/324 (76%), Positives = 284/324 (87%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             V+AGKSYY+VLQVP+GASDEQIKRAYRKLALKYHPDKNQGNEEA ++FAEINNAYEVLSD
Sbjct:    21 VLAGKSYYDVLQVPKGASDEQIKRAYRKLALKYHPDKNQGNEEATRKFAEINNAYEVLSD 80

Query:    81 SETRNIYDTYGEEGLKQHAAXXXXXXXXX-VNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
              E R IY+ YGEEGLKQ +A          +N+QDIFSSFFGGG MEE+EK+VKGDDVIV
Sbjct:    81 EEKREIYNKYGEEGLKQFSANGGRGGGGGGMNMQDIFSSFFGGGSMEEEEKVVKGDDVIV 140

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             EL+ATLEDLYMGGS+KVWREKNVIKPAPGKR+CNCRNEVYH+QIGPGMFQQMTEQVCD+C
Sbjct:   141 ELEATLEDLYMGGSMKVWREKNVIKPAPGKRKCNCRNEVYHRQIGPGMFQQMTEQVCDKC 200

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVKYEREGYFVTVDIEKGM+DG+EV FYEDGEP +DG+PGDLKFRIRTAPH RFRR+GN
Sbjct:   201 PNVKYEREGYFVTVDIEKGMKDGEEVSFYEDGEPILDGDPGDLKFRIRTAPHARFRRDGN 260

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGD 319
             +              GFEK+ +HLD+H VDIS+KGITKPKEV+KF GEGMPLH+S KKG+
Sbjct:   261 DLHMNVNITLVEALVGFEKSFKHLDDHEVDISSKGITKPKEVKKFKGEGMPLHYSTKKGN 320

Query:   320 LYITFEVLFPTTLTEDQKTRIKEV 343
             L++TFEVLFP++LT+DQK +IKEV
Sbjct:   321 LFVTFEVLFPSSLTDDQKKKIKEV 344

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005788 "endoplasmic reticulum lumen" evidence=IDA

GO:0052033 "pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response" evidence=IMP

GO:0006984 "ER-nucleus signaling pathway" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

GO:0005783 "endoplasmic reticulum" evidence=IDA

RGD|1307373 Dnajb11 "DnaJ (Hsp40) homolog, subfamily B, member 11" [Rattus norvegicus (taxid:10116)]

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 155/328 (47%), Positives = 202/328 (61%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F ++  AYEVLSD
Sbjct:    20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSD 79

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             SE R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV
Sbjct:    80 SEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGAPRQQDRNIPRGSDIIV 136

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   137 DLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 196

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G+
Sbjct:   197 PNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGD 256

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--K 317
             +              GFE  I HLD H V IS   IT+P       GEG+P +F N   K
Sbjct:   257 DLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIK 315

Query:   318 GDLYITFEVLFPTT-LTEDQKTRIKEVL 344
             G L ITF+V FP   LTE+ K  IK++L
Sbjct:   316 GSLIITFDVDFPKEQLTEEAKEGIKQLL 343

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0016556 "mRNA modification" evidence=IEA;ISO

GO:0051082 "unfolded protein binding" evidence=IEA;ISO

MGI|MGI:1915088 Dnajb11 "DnaJ (Hsp40) homolog, subfamily B, member 11" [Mus musculus (taxid:10090)]

 Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
 Identities = 155/328 (47%), Positives = 202/328 (61%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F ++  AYEVLSD
Sbjct:    20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSD 79

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             SE R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV
Sbjct:    80 SEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIV 136

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   137 DLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 196

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G+
Sbjct:   197 PNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHRIFERRGD 256

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--K 317
             +              GFE  I HLD H V IS   IT+P       GEG+P +F N   K
Sbjct:   257 DLYTNVTVSLVEALVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIK 315

Query:   318 GDLYITFEVLFPTT-LTEDQKTRIKEVL 344
             G L ITF+V FP   LTE+ K  IK++L
Sbjct:   316 GSLIITFDVDFPKEQLTEEAKEGIKQLL 343

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO;IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0016556 "mRNA modification" evidence=ISO;IDA

GO:0051082 "unfolded protein binding" evidence=IDA

UNIPROTKB|Q9UBS4 DNAJB11 "DnaJ homolog subfamily B member 11" [Homo sapiens (taxid:9606)]

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 154/328 (46%), Positives = 202/328 (61%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  + +A ++F ++  AYEVLSD
Sbjct:    20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPQAQEKFQDLGAAYEVLSD 79

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             SE R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV
Sbjct:    80 SEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIV 136

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   137 DLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 196

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G+
Sbjct:   197 PNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGD 256

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--K 317
             +              GFE  I HLD H V IS   IT+P       GEG+P +F N   K
Sbjct:   257 DLYTNVTISLVESLVGFEMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIK 315

Query:   318 GDLYITFEVLFPTT-LTEDQKTRIKEVL 344
             G L ITF+V FP   LTE+ +  IK++L
Sbjct:   316 GSLIITFDVDFPKEQLTEEAREGIKQLL 343

GO:0006457 "protein folding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016556 "mRNA modification" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=TAS

GO:0005788 "endoplasmic reticulum lumen" evidence=TAS

GO:0006987 "activation of signaling protein activity involved in unfolded protein response" evidence=TAS

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=TAS

UNIPROTKB|F1SFJ8 DNAJB11 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 153/328 (46%), Positives = 201/328 (61%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSD
Sbjct:    20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSD 79

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             SE R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV
Sbjct:    80 SEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIV 136

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   137 DLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 196

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G+
Sbjct:   197 PNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGD 256

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--K 317
             +              GF+  I HLD H V IS   IT+P       GEG+P +F N   K
Sbjct:   257 DLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIK 315

Query:   318 GDLYITFEVLFPTT-LTEDQKTRIKEVL 344
             G L ITF+V FP   LTE+ +  IK++L
Sbjct:   316 GSLIITFDVDFPKEQLTEEAREGIKQLL 343

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0016556 "mRNA modification" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

UNIPROTKB|Q3ZBA6 DNAJB11 "DnaJ homolog subfamily B member 11" [Bos taurus (taxid:9913)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 152/328 (46%), Positives = 201/328 (61%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             VIAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSD
Sbjct:    20 VIAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSD 79

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             SE R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV
Sbjct:    80 SEKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIV 136

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   137 DLEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 196

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G+
Sbjct:   197 PNVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHSIFERRGD 256

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--K 317
             +              GF+  I HLD H V IS   IT+P       GEG+P +F N   K
Sbjct:   257 DLYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIK 315

Query:   318 GDLYITFEVLFPTT-LTEDQKTRIKEVL 344
             G L ITF+V FP   L+E+ +  IK++L
Sbjct:   316 GSLIITFDVDFPKEQLSEEAREGIKQLL 343

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0016556 "mRNA modification" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

UNIPROTKB|P81999 DNAJB11 "DnaJ homolog subfamily B member 11" [Canis lupus familiaris (taxid:9615)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 152/327 (46%), Positives = 200/327 (61%)

Query:    22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
             IAG+ +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSDS
Sbjct:    21 IAGRDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDS 80

Query:    82 ETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVE 140
             E R  YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV+
Sbjct:    81 EKRKQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIVD 137

Query:   141 LDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQ 200
             L+ TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C 
Sbjct:   138 LEVTLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECP 197

Query:   201 NVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNN 260
             NVK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++
Sbjct:   198 NVKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDD 257

Query:   261 XXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--KG 318
                           GF+  I HLD H V IS   IT+P       GEG+P +F N   KG
Sbjct:   258 LYTNVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIKG 316

Query:   319 DLYITFEVLFPTT-LTEDQKTRIKEVL 344
              L ITF+V FP   LTE+ +  IK++L
Sbjct:   317 SLIITFDVDFPKEQLTEEAREGIKQLL 343

GO:0005788 "endoplasmic reticulum lumen" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

UNIPROTKB|F1NVY5 DNAJB11 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 148/326 (45%), Positives = 197/326 (60%)

Query:    23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
             AG+ +Y++L V RGAS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSD E
Sbjct:    28 AGRDFYKILGVSRGASVKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDEE 87

Query:    83 TRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVEL 141
              R  YD YGEEGLK  H +             D F   FGG P ++D  I +G D+IV+L
Sbjct:    88 KRKQYDAYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGNPRQQDRNIPRGSDIIVDL 144

Query:   142 DATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQN 201
             + TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C N
Sbjct:   145 EVTLEEVYSGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPN 204

Query:   202 VKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNX 261
             VK   E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++ 
Sbjct:   205 VKLVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVLKHPVFERRGDDL 264

Query:   262 XXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--KGD 319
                          GFE  I HLD H V ++   ITKP       GEG+P +F N   KG 
Sbjct:   265 YTNVTISLVEALTGFEMDITHLDGHKVHVARDKITKPGAKLWKKGEGLP-NFDNNNIKGS 323

Query:   320 LYITFEVLFPTT-LTEDQKTRIKEVL 344
             L ITF+V FP   LT +Q+  +K++L
Sbjct:   324 LIITFDVEFPKEQLTSEQREGLKQLL 349

GO:0006457 "protein folding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0016556 "mRNA modification" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

UNIPROTKB|F1PXX5 DNAJB11 "DnaJ homolog subfamily B member 11" [Canis lupus familiaris (taxid:9615)]

 Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
 Identities = 149/324 (45%), Positives = 197/324 (60%)

Query:    25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
             + +Y++L VPR AS + IK+AYRKLAL+ HPD+N  +  A ++F ++  AYEVLSDSE R
Sbjct:    24 RDFYKILGVPRSASIKDIKKAYRKLALQLHPDRNPDDPRAQEKFQDLGAAYEVLSDSEKR 83

Query:    85 NIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDA 143
               YDTYGEEGLK  H +             D F   FGG P ++D  I +G D+IV+L+ 
Sbjct:    84 KQYDTYGEEGLKDGHQSSHGDIFSHFFG--D-FGFMFGGTPRQQDRNIPRGSDIIVDLEV 140

Query:   144 TLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK 203
             TLE++Y G  ++V R K V + APGKR+CNCR E+   Q+GPG FQ   E VCD+C NVK
Sbjct:   141 TLEEVYAGNFVEVVRNKPVARQAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDECPNVK 200

Query:   204 YEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXX 263
                E   + V+IE G++DG E  F  +GEP +DGEPGDL+FRI+   H  F R G++   
Sbjct:   201 LVNEERTLEVEIEPGVRDGMEYPFIGEGEPHVDGEPGDLRFRIKVVKHPIFERRGDDLYT 260

Query:   264 XXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK--KGDLY 321
                        GF+  I HLD H V IS   IT+P       GEG+P +F N   KG L 
Sbjct:   261 NVTISLVESLVGFDMDITHLDGHKVHISRDKITRPGAKLWKKGEGLP-NFDNNNIKGSLI 319

Query:   322 ITFEVLFPTT-LTEDQKTRIKEVL 344
             ITF+V FP   LTE+ +  IK++L
Sbjct:   320 ITFDVDFPKEQLTEEAREGIKQLL 343

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

ZFIN|ZDB-GENE-031113-9 dnajb11 "DnaJ (Hsp40) homolog, subfamily B, member 11" [Danio rerio (taxid:7955)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 147/328 (44%), Positives = 195/328 (59%)

Query:    21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
             V AG+ +Y++L V R AS + IK+AYRKLAL+ HPD+NQ +  A  +FA++  AYEVLSD
Sbjct:    22 VFAGRDFYKILGVSRSASVKDIKKAYRKLALQLHPDRNQDDPNAQDKFADLGAAYEVLSD 81

Query:    81 SETRNIYDTYGEEGLKQ-HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
              E R  YD YGEEGLK+ H +             D F   FGG        I +G+D+++
Sbjct:    82 EEKRKQYDAYGEEGLKEGHQSSHGDIFSSFFG--D-FGFMFGGSRQPAGRDIPRGNDIVL 138

Query:   140 ELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQC 199
             +L+ TLE++Y G  ++V R K V K APGKR+CNCR E+   Q+GPG FQ   E VCD+C
Sbjct:   139 DLEVTLEEVYSGNFVEVVRIKPVAKEAPGKRKCNCRQEMRTTQLGPGRFQMTQEVVCDEC 198

Query:   200 QNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
              N+K   E   + V+IE+G++D  E  F  +GEP IDGEPGDL+FRI+   H  F R G+
Sbjct:   199 PNIKLVNEERTLEVEIEQGVRDEMEYPFIGEGEPHIDGEPGDLRFRIKVLKHPVFERRGD 258

Query:   260 NXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKP-KEVRKFGGEGMPLHFSNK-K 317
             +              GFE  I HLD H V I    ITKP   + K  GEG+P   +N  +
Sbjct:   259 DLYTNVTISLVEALVGFEVDITHLDGHKVHIVRDKITKPGSRIWK-KGEGLPSFDNNNIR 317

Query:   318 GDLYITFEVLFPTTLTEDQ-KTRIKEVL 344
             G L ITF+V FP    +DQ K  IK++L
Sbjct:   318 GSLIITFDVDFPREQLDDQQKDGIKQLL 345

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P81999	DJB11_CANFA	No assigned EC number	0.4850	0.9101	0.8770	yes	no
B9MJZ0	DNAJ_CALBD	No assigned EC number	0.3388	0.9101	0.8092	yes	no
B0S1F7	DNAJ_FINM2	No assigned EC number	0.3150	0.9072	0.8413	yes	no
Q9UBS4	DJB11_HUMAN	No assigned EC number	0.4840	0.9420	0.9078	yes	no
Q3ZBA6	DJB11_BOVIN	No assigned EC number	0.4782	0.9420	0.9078	yes	no
P63971	DNAJ_STAAN	No assigned EC number	0.3220	0.9246	0.8416	yes	no
A4XKA5	DNAJ_CALS8	No assigned EC number	0.3342	0.9188	0.8191	yes	no
Q99KV1	DJB11_MOUSE	No assigned EC number	0.4927	0.9420	0.9078	yes	no
Q5HNW7	DNAJ_STAEQ	No assigned EC number	0.3266	0.9217	0.8525	yes	no
A0LJ41	DNAJ_SYNFM	No assigned EC number	0.3333	0.8927	0.8020	yes	no
P63972	DNAJ_STAAW	No assigned EC number	0.3220	0.9246	0.8416	yes	no
Q8CP18	DNAJ_STAES	No assigned EC number	0.3266	0.9217	0.8525	yes	no
A1WAR7	DNAJ_ACISJ	No assigned EC number	0.3190	0.9275	0.8510	yes	no
Q2YT48	DNAJ_STAAB	No assigned EC number	0.3220	0.9246	0.8416	yes	no
Q6G8Y8	DNAJ_STAAS	No assigned EC number	0.3220	0.9246	0.8416	yes	no
Q6TUG0	DJB11_RAT	No assigned EC number	0.4927	0.9420	0.9078	yes	no
Q8MPX3	DNJ20_CAEEL	No assigned EC number	0.4362	0.9652	0.9380	yes	no
B9MDJ8	DNAJ_ACIET	No assigned EC number	0.3162	0.9275	0.8510	yes	no
A6LRN5	DNAJ_CLOB8	No assigned EC number	0.3237	0.9130	0.8355	yes	no
A8Z4B8	DNAJ_STAAT	No assigned EC number	0.3220	0.9246	0.8416	yes	no
Q5RAJ6	DJB11_PONAB	No assigned EC number	0.4840	0.9420	0.9078	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00028084001	SubName- Full=Putative uncharacterized protein (Chromosome chr7 scaffold_42, whole genome shotgun sequence); (345 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00006855001	SubName- Full=Chromosome undetermined scaffold_178, whole genome shotgun sequence; (899 aa)			•			•			0.871
	GSVIVG00032542001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (895 aa)			•			•			0.869
	GSVIVG00006252001	SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (392 aa)						•			0.800
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.483
	GSVIVG00005738001	SubName- Full=Chromosome chr3 scaffold_157, whole genome shotgun sequence; (626 aa)			•						0.481
	GSVIVG00004141001	SubName- Full=Chromosome undetermined scaffold_611, whole genome shotgun sequence; (468 aa)			•						0.480
	GSVIVG00012517001	SubName- Full=Chromosome undetermined scaffold_388, whole genome shotgun sequence; Flags- Fragm [...] (372 aa)			•						0.478
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.476
	GSVIVG00037232001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (658 aa)			•						0.475
	GSVIVG00006687001	SubName- Full=Chromosome chr2 scaffold_176, whole genome shotgun sequence; (667 aa)			•						0.475

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	345
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	3e-86
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	4e-71
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	4e-65
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	1e-58
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	4e-58
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-56
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-52
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	6e-51
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	7e-51
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	1e-50
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	6e-50
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-46
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	5e-45
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	7e-45
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-43
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	6e-43
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-42
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	8e-42
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	4e-41
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	6e-41
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	3e-40
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	9e-40
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	6e-39
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	4e-36
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	6e-36
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-35
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	4e-34
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	5e-33
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	2e-32
pfam00226	63	pfam00226, DnaJ, DnaJ domain	3e-32
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	5e-32
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	2e-30
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-28
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	3e-26
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	9e-23
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	1e-22
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	1e-21
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	4e-20
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	6e-14
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	1e-07
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	5e-07
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	1e-05
COG1076	174	COG1076, DjlA, DnaJ-domain-containing proteins 1 [	1e-05
PRK01356	166	PRK01356, hscB, co-chaperone HscB; Provisional	4e-05
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	1e-04
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.001
PTZ00100	116	PTZ00100, PTZ00100, DnaJ chaperone protein; Provis	0.002
PRK03578	176	PRK03578, hscB, co-chaperone HscB; Provisional	0.004

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  264 bits (677), Expect = 3e-86
 Identities = 114/341 (33%), Positives = 169/341 (49%), Gaps = 27/341 (7%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           A + YYE+L V + AS+E+IK+AYRKLA KYHPD+N G++EA ++F EIN AYEVLSD E
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPE 61

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEK--IVKGDDVIVE 140
            R  YD +G  G K    GG   GG G +  DIF  FFGGG           +G D+   
Sbjct: 62  KRAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYN 121

Query: 141 LDATLEDLYMGGSLKVWREKNVI---------KPAPGKRRC-NCR-NEVYHKQIGPGMFQ 189
           L+ TLE+   G   ++   ++V          KP    + C  C  +         G F 
Sbjct: 122 LEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFS 181

Query: 190 QMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDG 237
                          +  C +C+     ++   ++V+I  G+ DG  +    +GE   +G
Sbjct: 182 FQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNG 241

Query: 238 -EPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGIT 296
              GDL   +   PH  F R+G++L+  V ++  +A +G E  +  LD   V +     T
Sbjct: 242 GPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGT 300

Query: 297 KPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
           +  EV +  G+GMP   S  +GDLY+  +V  P  L+++QK
Sbjct: 301 QTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQK 341

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  224 bits (574), Expect = 4e-71
 Identities = 119/353 (33%), Positives = 172/353 (48%), Gaps = 40/353 (11%)

Query: 26  SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85
            YYE+L V + AS+E+IK+AYRKLA KYHPD+N+ ++EA ++F EIN AYEVLSD E R 
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRA 59

Query: 86  IYDTYGEEGLKQHAAGGGRGGGMGVN-----IQDIFSSFFGGGP---MEEDEKIVKGDDV 137
            YD +G  G      GGG G             DIF  FFGGG            +G+D+
Sbjct: 60  QYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDL 119

Query: 138 IVELDATLEDLYMG--GSLKVWREKNV-------IKPAPGKRRC-NC--RNEVYHKQIGP 185
             +L+ T E+   G    +++ R+++         KP    + C  C    +V  +Q  P
Sbjct: 120 RYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTP 179

Query: 186 -GMFQQMTEQVCDQCQ--------------NVKYEREGYFVTVDIEKGMQDGQEVVFYED 230
            G FQQ  +Q C  C                    +E   +TV I  G+  GQ +     
Sbjct: 180 FGFFQQ--QQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGK 237

Query: 231 GEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVD 289
           G      G  GDL   IR  PH  F R+GN+L+  V ++  QA++G E  +  LD   V 
Sbjct: 238 GNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD-VK 296

Query: 290 ISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
           +     T+   V +  G+G+P    N +GDL +T +V  P  L+++QK  ++E
Sbjct: 297 LKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLEE 349

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  211 bits (538), Expect = 4e-65
 Identities = 126/355 (35%), Positives = 186/355 (52%), Gaps = 53/355 (14%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           +  YEVL + +  +  +IK+AYRKLA+K+HPDK  G+ E   +F EI+ AYEVLSD E R
Sbjct: 28  EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDPE---KFKEISRAYEVLSDPEKR 83

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDAT 144
            IYD YGEEGL+        GG    +  D+F   FGGG     +K  +G+D++  L  T
Sbjct: 84  KIYDEYGEEGLE--------GGEQPADASDLFDLIFGGGRKPGGKK--RGEDIVSHLKVT 133

Query: 145 LEDLYMGGSLKVWREKNVI--------KPAPGKRRCNCRN----EVYHKQIGPGMFQQMT 192
           LE +Y G   K+   K+VI         P      C   N     V  +Q+G  M  Q T
Sbjct: 134 LEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGS-MIHQ-T 191

Query: 193 EQVC-------------DQCQN-----VKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK 234
           +  C              +C+N     VK  R+   + V+I+KG+ +  ++ F+ + + K
Sbjct: 192 QSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRK--ILEVNIDKGVPNQHKITFHGEADEK 249

Query: 235 IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEH--LVDIST 292
            +  PG++ F +   PHD F+REG +L  T  ++L +AL GF   I HLD    LV+   
Sbjct: 250 PNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPP 309

Query: 293 KGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPT--TLTEDQKTRIKEVL 344
             + KP +++    EGMP + S  KKG+LY+TFEV+FP     T ++K  +K + 
Sbjct: 310 GEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLF 364

Length = 421

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  193 bits (493), Expect = 1e-58
 Identities = 116/357 (32%), Positives = 161/357 (45%), Gaps = 61/357 (17%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           A + YYEVL V R AS+++IK+AYRKLA+KYHPD+N G++EA ++F EI  AYEVLSD +
Sbjct: 2   AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQ 61

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVE 140
            R  YD YG    +Q   GGG GGG G      DIF   FGGG     ++  +G D+   
Sbjct: 62  KRAAYDQYGHAAFEQGGGGGGFGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYN 121

Query: 141 LDATLEDLYMGGSLKVWREKNVIKPA-------------PGKRRCNCRNEVYHKQIGPGM 187
           ++ TLE+   G        K +  P              PG     C       Q+    
Sbjct: 122 MEITLEEAVRG------VTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVR--- 172

Query: 188 FQQ---MTEQVCDQCQ-----------------NVKYEREGYFVTVDIEKGMQDGQEVVF 227
            QQ     +Q C  C                   V+ E+    ++V I  G+  G  +  
Sbjct: 173 MQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKT---LSVKIPAGVDTGDRIRL 229

Query: 228 YEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD-E 285
             +GE    G P GDL  +I    H  F R+GN+L+  V ++   A +G E  +  LD  
Sbjct: 230 SGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDGR 289

Query: 286 HLVDISTKGITKPKEV---RKF--GGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
             + I       P+     + F   G+G+    S  +GDLY    V  P  LT+ QK
Sbjct: 290 VKLKI-------PEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQK 339

Length = 371

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  192 bits (489), Expect = 4e-58
 Identities = 123/355 (34%), Positives = 172/355 (48%), Gaps = 46/355 (12%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YY +L V R ASD +IKRAYRKLA + HPD N  +EEA ++F EI+ AYEVLSD E R
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVN-PDEEAQEKFKEISVAYEVLSDPEKR 61

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEED--EKIVKGDDVIVELD 142
            I D  G+        GGG GGG G  + D+F +FFGGG        ++  G D ++ + 
Sbjct: 62  RIVDLGGDPLESAGGGGGGFGGGFG-GLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMR 120

Query: 143 ATLEDLYMGGSLKVWREKNVI-------------KPAPGKRRCNCRNEVYHKQ---IGPG 186
             LE+   G + +V  +  V+             KP      C  R EV   Q   +G  
Sbjct: 121 LDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDT-CGGRGEVQTVQRSFLG-- 177

Query: 187 MFQQMTEQVCDQCQN-----------------VKYEREGYFVTVDIEKGMQDGQEVVFYE 229
             Q MT + C  C+                  V+  RE   +TV I  G+ DG  +    
Sbjct: 178 --QVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARRE---ITVKIPAGVGDGMRIRLAA 232

Query: 230 DGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLV 288
            GE    G P GDL   +   PHD F R+G++LH TV+V +V A +G   T+E + +   
Sbjct: 233 QGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPS 292

Query: 289 DISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEV 343
           +I+    T+P  V    G GMP   S  +GDL+   EV+ PT L  +    ++E+
Sbjct: 293 EITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELLREL 347

Length = 378

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score =  188 bits (479), Expect = 1e-56
 Identities = 114/363 (31%), Positives = 169/363 (46%), Gaps = 51/363 (14%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           K YYE+L V R A++E+IK+AYR+LA KYHPD N G++EA ++F EIN AYE+LSD + R
Sbjct: 5   KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKR 64

Query: 85  NIYDTYGEEGLKQHAAGGG--------------RGGGMGVNIQDIFSSFFGGGPMEEDEK 130
             YD +G         G G                GG G   +DIF  FFG G    +  
Sbjct: 65  AQYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETG 124

Query: 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPA-------PGKR-----RCNCRNEV 178
             KG D+  +L+ T E+   G   ++  E+             PG +      C+   +V
Sbjct: 125 PQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQV 184

Query: 179 YHKQIGPGMFQQMTE-QVCDQCQ-----------------NVKYEREGYFVTVDIEKGMQ 220
             +Q  P  F ++   + CD+C                   ++  R+   + V+I  G+ 
Sbjct: 185 RTRQNTP--FGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRK---IKVNIPAGID 239

Query: 221 DGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKT 279
           DGQ +    +GEP I G P GDL   I+  PH  F+REG N++  + +T   A +G E  
Sbjct: 240 DGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIE 299

Query: 280 IEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTR 339
           I  LD   V  +    T+     +  G+G+P      +GD  +   +  P  LTE QK  
Sbjct: 300 IPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKEL 358

Query: 340 IKE 342
           ++E
Sbjct: 359 LRE 361

Length = 386

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  175 bits (446), Expect = 5e-52
 Identities = 118/356 (33%), Positives = 164/356 (46%), Gaps = 55/356 (15%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
           YYE+L V R AS+E+IK++YRKLA+KYHPD+N G++EA + F E   AYEVLSD + R I
Sbjct: 6   YYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGI 65

Query: 87  YDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSF---------FGGGPMEEDEKIV-KGDD 136
           YD YG EGL      G  G        DIFSSF         FGGG        V  G D
Sbjct: 66  YDQYGHEGLSGTGFSGFSG------FDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGAD 119

Query: 137 VIVELDATLEDLYMGGSLKVWREKNVIKP-----------APGKR-----RCNCRNEVYH 180
           +  +L     +   G      +E  + K             PG       +C    +V  
Sbjct: 120 LRYDLTLPFLEAAFG----TEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQ 175

Query: 181 KQIGPGMFQ------------QMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY 228
            Q   G F             ++    C  C      R    V V I  G+  G  +   
Sbjct: 176 SQ---GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLR 232

Query: 229 EDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD-EH 286
            +GE  +  G PGDL   +   PH+ F R+GN++H  V ++ VQA +G +  +  L+ E 
Sbjct: 233 GEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGER 292

Query: 287 LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
            + I  KG T+P ++ +F G+G+P      +GD  I  EV  PT LT+ Q+  + E
Sbjct: 293 ELKIP-KG-TQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTE 346

Length = 366

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  173 bits (440), Expect = 6e-51
 Identities = 106/349 (30%), Positives = 161/349 (46%), Gaps = 50/349 (14%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           K YYE+L V R A+ E+IK+AYR+LA KYHPD N+ N EA ++F EIN AY+VLSD E R
Sbjct: 3   KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKR 61

Query: 85  NIYDTYGEEGL----KQHAAGGGRGGGMGVNIQDIFSSFFG----GGPMEED-------- 128
            +YD +G        +Q     G     G NI+DI    F     G              
Sbjct: 62  KLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRK 121

Query: 129 --EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVI---------KPAPGKRRC-NC-- 174
             ++ VKG+D+   ++ +LE+ Y G ++ +   + V           P  G++ C  C  
Sbjct: 122 TYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGG 181

Query: 175 RNEVYHKQIGPGMFQQMTEQVCDQCQNVKYERE--------GYF-----VTVDIEKGMQD 221
             E+Y +    G F +++ Q C  C      RE        G       + V I  G+ +
Sbjct: 182 SGEIYQR----GGFFRIS-QTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDN 236

Query: 222 GQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTI 280
           G ++     G   +  G PGDL   ++  PH  F R G+NL+  V +T+ +A++G E  +
Sbjct: 237 GSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEV 296

Query: 281 EHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFP 329
             LD     +     TK  +  +  G+GMP    +  GDL +   +  P
Sbjct: 297 PLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP 345

Length = 382

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score =  173 bits (439), Expect = 7e-51
 Identities = 117/353 (33%), Positives = 169/353 (47%), Gaps = 45/353 (12%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYEVL V R AS+++IK+AYRKLAL+YHPD+N  N EA ++F E   AYEVL D+E R
Sbjct: 4   RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKR 63

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSF---------FGGGPMEEDEKIVKGD 135
             YD +G  G+     G G  GG     +DIFS F         F GG      +   G 
Sbjct: 64  ARYDRFGHAGVN----GNGGFGGFSSA-EDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGS 118

Query: 136 DVIVELDATLEDLYMGGSLKVWREKNVIKP-------APGK-----RRCNCRNEVYHKQI 183
           D+   L  +      G  + +   KNV          APG      R C    +V   Q 
Sbjct: 119 DLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQ- 177

Query: 184 GPGMFQ------------QMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231
             G FQ            ++    C +C+     ++   + V I  G+  G  +    +G
Sbjct: 178 --GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEG 235

Query: 232 EPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHL-VD 289
           EP + G P GDL   I       F+R+G +L  T  ++ VQA +G    +  LD+ + +D
Sbjct: 236 EPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPVTLD 295

Query: 290 ISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
           I  KG T+  EV +  G+G+P   S++KGDL +   V+ PT LT+ Q+  ++E
Sbjct: 296 IP-KG-TQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLRE 346

Length = 373

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score =  172 bits (438), Expect = 1e-50
 Identities = 113/356 (31%), Positives = 170/356 (47%), Gaps = 37/356 (10%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           +A K YYEVL + +GASD++IK+A+RKLA+KYHPDKN+GN+EA ++F EIN AY+VLSD 
Sbjct: 1   MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDP 60

Query: 82  ETRNIYDTYGEE------GLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEK---IV 132
           + +  YD +G        G      GG     MG    DIF SFFGGG      +     
Sbjct: 61  QKKAQYDQFGTADFNGAGGFGSGGFGGFDFSDMG-GFGDIFDSFFGGGFGSSSRRRNGPQ 119

Query: 133 KGDDVIVELDATLEDLYMG--GSLKVWREKNV-------IKPAPGKR---RCNCRNEVYH 180
           +G D+   ++ T E+   G    + V R +N         KP    +   +C    ++  
Sbjct: 120 RGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRV 179

Query: 181 KQIGP-GMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227
           ++  P G F   T            E  C++C      R+   + V++  G+  G  +  
Sbjct: 180 QRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPL 239

Query: 228 YEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEH 286
              GE  K  G  GDL   IR APH  F+R+G +++    ++  +A +G E  +  +D  
Sbjct: 240 RGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE 299

Query: 287 LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
            V       T+P  V +  G+G+P   S  +G+ Y+T  V  P  L   QK  +  
Sbjct: 300 -VKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTM 354

Length = 380

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score =  170 bits (433), Expect = 6e-50
 Identities = 117/354 (33%), Positives = 170/354 (48%), Gaps = 38/354 (10%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           +A + YYEVL V + AS ++IK+AYRKL+ KYHPD N+  E A+++F EI+ AYEVLSD 
Sbjct: 1   MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDD 59

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGG---GMGVNIQDIFSSFFGGGPMEEDEKIV-KGDDV 137
           + R  YD +G  G  Q   GGG GG   G G   +DIFSSFFGGG    D     +G D+
Sbjct: 60  QKRAQYDQFGHAGPNQGFGGGGFGGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADL 119

Query: 138 IVELDATLEDLYMGGSLKVWREKNV---------IKPAPGKRRCN-C------------- 174
              +  T E+   G   ++   K            KP   K  C+ C             
Sbjct: 120 QYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTP 179

Query: 175 ----RNE-VYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE 229
                N        G G   Q  ++ C  C      R+   + V I  G+ +GQ++    
Sbjct: 180 FGRVVNRQTCPHCNGTG---QEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSG 236

Query: 230 DGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLV 288
           +GEP ++G P GDL    R  PH+ F R+G++++  + +T  QA +G E  +  L   + 
Sbjct: 237 EGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGKVK 296

Query: 289 DISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
                G     + R   G+G+P      +GD Y+   V+ PT LT+ QK  ++E
Sbjct: 297 LKIPAGTQTGTQFR-LKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKELLRE 349

Length = 376

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score =  161 bits (410), Expect = 1e-46
 Identities = 105/361 (29%), Positives = 161/361 (44%), Gaps = 51/361 (14%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
               YY+ L V + AS ++IK+AYRKL+ KYHPD N+    A +++ E+  AYE LSD +
Sbjct: 2   NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQ 60

Query: 83  TRNIYDTYGEEGLKQHAAGGGRG-------GGMGVNIQDIFSSFFGGGPMEEDEKIV-KG 134
            R  YD YG  G      GG  G       GG G   +DIFSSFFGGG    +     +G
Sbjct: 61  KRAAYDQYGAAGANGGFGGGAGGFGGFDGSGGFG-GFEDIFSSFFGGGGARRNPNAPRQG 119

Query: 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPA-------PGKRRCNCRNEVYHKQIGPGM 187
           DD+   ++   E+   G   +V   +             PG     C      K  G G+
Sbjct: 120 DDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTC-----GKCHGSGV 174

Query: 188 FQ---------QMTEQVCDQC----QNVKY----------EREGYFVTVDIEKGMQDGQE 224
                         +  CD C    + +K           E++ + V+V I  G++ GQ+
Sbjct: 175 ITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQ 234

Query: 225 VVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIE-- 281
           +     GE   +G P GDL    R  P  +F R+G+ ++ T+ ++ VQA +G    +   
Sbjct: 235 IRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTV 294

Query: 282 HLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIK 341
           H D   V++     T+  +  +  G+G P       GD ++T  ++ PT L + QK  +K
Sbjct: 295 HGD---VELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEALK 351

Query: 342 E 342
            
Sbjct: 352 A 352

Length = 380

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score =  157 bits (399), Expect = 5e-45
 Identities = 107/364 (29%), Positives = 174/364 (47%), Gaps = 48/364 (13%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDS 81
             K YYE+L V R A+ E+IKRAY++L  ++HPD++  N +EA ++F EI  AYEVLSD 
Sbjct: 2   EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDP 61

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGGMGVNI---------QDIFSSFFGGGPMEEDEKIV 132
           + R +YD +G  G +        GGG   +I         +DIF  FFG    +E+++  
Sbjct: 62  QKRAMYDRFGYVGEQPPYQETESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREY 121

Query: 133 --KGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-------APGKRRCNC--------- 174
             +G+D+  E++ TL DL  G  + V  ++    P        PG     C         
Sbjct: 122 ARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRI 181

Query: 175 RNEVYHKQIGPGMFQQMTEQVCDQC-------QNVKYE-------REGYFVTVDIEKGMQ 220
           R E   ++   G+F  ++E+ C++C           +E       R     TV I  G++
Sbjct: 182 REE---RRSFFGVF--VSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVE 236

Query: 221 DGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKT 279
           DG  +     G     G P GDL   +R  P  RF+R G++L   VT+  +QA++G    
Sbjct: 237 DGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVE 296

Query: 280 IEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTR 339
           +   +     +     T+P+ V +  G+G+P     ++GDL +   V  P  L+ +++  
Sbjct: 297 VPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKL 356

Query: 340 IKEV 343
           +KE+
Sbjct: 357 LKEL 360

Length = 369

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score =  157 bits (398), Expect = 7e-45
 Identities = 115/356 (32%), Positives = 167/356 (46%), Gaps = 46/356 (12%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYEVL V R A  ++IK+AYRKLA KYHPD ++  E A ++F EI+ AY VLSD E R
Sbjct: 5   RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKR 63

Query: 85  NIYDTYGEEGLKQHAAG------------GGRGGGMGVNIQDIFSSFFGGGPMEEDEKIV 132
             YD +G  G+   +               G G G+G NI D+F   FGGG     +   
Sbjct: 64  QRYDQFGHAGMDGFSQEDIFNNINFEDIFQGFGFGIG-NIFDMFG--FGGGSRHGPQ--- 117

Query: 133 KGDDVIVELDATLEDLYMGGS--LKVWREK-------NVIKPAPGKRRC-NCRNEVYHKQ 182
           +G D+  E++ TLE+   G    +KV   K       +  +P    + C  C      KQ
Sbjct: 118 RGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQ 177

Query: 183 IGPGMFQQM---------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227
           +   +  QM                E+ C  C      RE   ++V I  G++ G  +  
Sbjct: 178 VRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV 237

Query: 228 YEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEH 286
             +GE     GEPGDL   I+  PH  FRREG NL+    ++ VQA +G    +  +D  
Sbjct: 238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDGP 297

Query: 287 LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
            V++     T+     +  G GMP    + KG+LY+  +V+ P  L+  QK  ++E
Sbjct: 298 -VELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLRE 352

Length = 378

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score =  153 bits (388), Expect = 2e-43
 Identities = 111/353 (31%), Positives = 166/353 (47%), Gaps = 45/353 (12%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYE+L + + AS E IK+AYRKLA+KYHPDKN+   +A ++F EI+ AY VLSD+E R
Sbjct: 5   RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKR 63

Query: 85  NIYDTYGEEGL-KQHAA----GGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIV 139
             YD +G  G+  Q++A     G   GG G    DIF  FFGGG         +G D+  
Sbjct: 64  AQYDRFGHAGIDNQYSAEDIFRGADFGGFG----DIFEMFFGGGGRRGRMGPRRGSDLRY 119

Query: 140 ELDATLEDLYMG--GSLKVWREKNV-------IKPAPGKRRC-NC--RNEVYHKQIGPGM 187
           +L  TLE+   G    + V R +          KP    +RC  C    +V   +  P  
Sbjct: 120 DLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLG 179

Query: 188 FQQMTEQVCDQCQ-----------------NVKYEREGYFVTVDIEKGMQDGQEVVFYED 230
            Q +T   C  C                   V+  R+   +TV++  G   G  +    +
Sbjct: 180 -QFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRK---ITVNVPAGADSGLRLKLSGE 235

Query: 231 GEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVD 289
           GE    G P GDL   +    HD F R G+++ + + ++  QA +G +  +  L    V 
Sbjct: 236 GEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VK 294

Query: 290 ISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
           ++    T+   V +   +GMP    + KGD  +   V  PT LT++QK  ++E
Sbjct: 295 MNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLRE 347

Length = 377

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  152 bits (386), Expect = 6e-43
 Identities = 117/371 (31%), Positives = 172/371 (46%), Gaps = 56/371 (15%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYEVL V R A  ++IK+AYRKLALKYHPDKN  N+EA + F E+N AYEVLS+ + R
Sbjct: 3   RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKR 62

Query: 85  NIYDTYGEEGLKQHAAGGGRG--GGMGVNIQDIFSSF---------FGGGPMEEDEKI-- 131
             YD +G  G+   AA GG    GG G +  DIFS+F          GGG     E +  
Sbjct: 63  RRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFG 122

Query: 132 -----------VKGDDVIVELDATLEDLYMG--GSLKVWREK-----NVIKPAPGKRR-- 171
                      + G D+ + L  TLE++  G   +LK+ ++      N      G     
Sbjct: 123 GGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETC 182

Query: 172 --CNCRNEVYHKQIGPGMFQQMTE-QVCDQC----QNVKYER------EGY-----FVTV 213
             C+   EV  +Q    MF Q      C  C    + VK +R      EG       V V
Sbjct: 183 PTCHGSGEV--RQASKTMFGQFVNITACPTCGGEGRVVK-DRCPACYGEGIKQGEVTVKV 239

Query: 214 DIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQA 272
            +  G+QDG  +     G      G PGDL   I   PH+ F R G+++   + V+    
Sbjct: 240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDL 299

Query: 273 LVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL 332
           ++G +  +  LD   V ++    T+P+ + +  G+G+     + +GD Y+   V  P  +
Sbjct: 300 VLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEV 358

Query: 333 TEDQKTRIKEV 343
           +   K  +KE+
Sbjct: 359 SHQDKELLKEL 369

Length = 397

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score =  150 bits (381), Expect = 2e-42
 Identities = 103/364 (28%), Positives = 168/364 (46%), Gaps = 54/364 (14%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
             + YYEVL V + A+ ++IK+AYRK A++YHPDKN G++EA ++F E   AY+VLSD +
Sbjct: 3   EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPD 62

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSF----------------FGGGPME 126
            R+ YD +G  G+   AAGGG   G G++++DIFS F                FGGG   
Sbjct: 63  KRSRYDQFGHAGVG-GAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGG--G 119

Query: 127 EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVI---------KPAPGKRRCN-CRN 176
             +++ +G D+ V++   L+++  G   K   +K V          +   G   C  C+ 
Sbjct: 120 SQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKG 179

Query: 177 E---VYHKQIGPGMFQQMTEQVCDQC----------------QNVKYEREGYFVTVDIEK 217
                  +    G  Q  T+  C  C                + + Y  E   +TV I  
Sbjct: 180 SGSVTRVQNTILGTMQ--TQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEE--VITVKIPA 235

Query: 218 GMQDGQEVVFYEDGE-PKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGF 276
           G+ +G ++     G   K  G  GDL   I   PH    R+ N+L   + +++  A +G 
Sbjct: 236 GVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGG 295

Query: 277 EKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQ 336
              +  +D     +  +  T+P +V +   +G+P       GDL +   V  P TL++++
Sbjct: 296 AVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEE 354

Query: 337 KTRI 340
           K  +
Sbjct: 355 KQTL 358

Length = 386

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  142 bits (362), Expect = 8e-42
 Identities = 56/199 (28%), Positives = 83/199 (41%), Gaps = 42/199 (21%)

Query: 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQ 194
            D+  +L+ TLE+ Y G   ++   + V                                
Sbjct: 1   ADLRYDLELTLEEAYFGKEKEIKIPRKVT------------------------------- 29

Query: 195 VCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDR 253
                      RE   +TV I  G+ DGQ +    +G+     G PGDL   IR  PH  
Sbjct: 30  ---------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPGDLYVVIRVKPHPV 80

Query: 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHF 313
           FRR+GN+L+  V ++L +AL+G E  +  L    V +     T+P  V +  G+GMP   
Sbjct: 81  FRRDGNDLYCEVPISLTEALLGGEIEVPTLG-GKVKLKIPPGTQPGTVLRLKGKGMPRLR 139

Query: 314 SNKKGDLYITFEVLFPTTL 332
              +GDLY+  +V FP  L
Sbjct: 140 GGGRGDLYVEVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  147 bits (373), Expect = 4e-41
 Identities = 109/366 (29%), Positives = 157/366 (42%), Gaps = 56/366 (15%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
           YY +L V + AS E+IK+AYRKLA+KYHPDKN G+ EA KRF E++ AYEVLSD++ R  
Sbjct: 3   YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRES 62

Query: 87  YDTYGEEGLKQHAAGGGRGGGMGVNIQD------------------IFSSFFGG-----G 123
           YD YG++G    A G G G GMG N++D                   F   FGG     G
Sbjct: 63  YDRYGKDGPFAGAGGFG-GAGMG-NMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFG 120

Query: 124 PMEEDEKIVKGDDVIVELDATLEDLYMG--GSLKVWREKNVIKPAPGKR----------- 170
                    +G    V +  + E+   G    L V   K+      G             
Sbjct: 121 MRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSC-DACSGSGANSSQGIKVCD 179

Query: 171 RCNCRNEVYHKQIGPGMFQ------------QMTEQVCDQCQNVKYEREGYFVTVDIEKG 218
           RC    +V   +   G F             ++    C  C+     ++   V V I  G
Sbjct: 180 RCKGSGQVVQSR---GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAG 236

Query: 219 MQDGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFE 277
           +  G  +     G+   +G P GDL   I   PH  F R G++L   + +  V A +G +
Sbjct: 237 VDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMK 296

Query: 278 KTIEHL-DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQ 336
           K I  L  E    ++     +   + K  G+G P      +GDL +   V  P  L+E+Q
Sbjct: 297 KEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQ 356

Query: 337 KTRIKE 342
           K  +++
Sbjct: 357 KELLRQ 362

Length = 391

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score =  146 bits (370), Expect = 6e-41
 Identities = 104/356 (29%), Positives = 164/356 (46%), Gaps = 38/356 (10%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           ++ +SYY++L V + A+DE+IK AYRKLA+KYHPDKN+GN+E+ ++F E   AYE+L D 
Sbjct: 1   MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDP 60

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGGMGV-----NIQDIFSSFFGGGPME-----EDEKI 131
           + R  YD +G+ G+   A G G+G          +  DIF  FFGGG             
Sbjct: 61  KKRQAYDQFGKAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGP 120

Query: 132 VKGDDVIVELDATLEDLYMGGSLKV---WREKNVIKPAPGKRR---------CNCRNEVY 179
            +G D+   L+ +LED  +G   K+     E  V     G  +         C    ++ 
Sbjct: 121 QRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIR 180

Query: 180 HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF 227
             Q   G F   T               C  C     + +   + + I  G++ G  +  
Sbjct: 181 RTQ---GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKV 237

Query: 228 YEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEH 286
             +GE   +G P GDL        H+ F R+GN+L     ++L QA++G E  +  +D  
Sbjct: 238 SGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGK 297

Query: 287 LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
              +     T+  +V +  G GMP   +  KGD ++  ++  P  +T  Q+  I+E
Sbjct: 298 KAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEE 353

Length = 372

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score =  144 bits (366), Expect = 3e-40
 Identities = 115/363 (31%), Positives = 169/363 (46%), Gaps = 72/363 (19%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ--GNEEANKRFAEINNAYEVLSDSETR 84
           YYE+L V R A  +++KRAYR+LA KYHPD N+  G E+   RF EIN AYEVLSD ETR
Sbjct: 5   YYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAED---RFKEINRAYEVLSDPETR 61

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGG--------------GPMEEDEK 130
             YD +GE G+   AAG    G MG    DIF +FF G              GP      
Sbjct: 62  ARYDQFGEAGVSG-AAGFPDMGDMG-GFADIFETFFSGFGGAGGQGGRRRRRGP------ 113

Query: 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNV---------------IKPAPGKRRC-NC 174
             +GDD+  +L     +   GG      EK +                KP  G   C  C
Sbjct: 114 -QRGDDLRYDLKLDFREAIFGG------EKEIRIPHLETCETCRGSGAKPGTGPTTCSTC 166

Query: 175 --RNEVYHKQIGP-GMFQQMTE--------QV----CDQC--QNVKYEREGYFVTVDIEK 217
               +V      P G F Q++E        QV    CD C  Q VK   +   + ++I  
Sbjct: 167 GGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKK--LKINIPA 224

Query: 218 GMQDGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGF 276
           G+  G  +    +G+  + G P GDL   +       FRR+G N+ + + ++ +QA++G 
Sbjct: 225 GVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGD 284

Query: 277 EKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LHFSNKKGDLYITFEVLFPTTLTED 335
              ++ +D   V+++    T+P  V     +G+P L     +GD  IT +V  PT ++++
Sbjct: 285 TLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDE 343

Query: 336 QKT 338
           ++ 
Sbjct: 344 ERE 346

Length = 374

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score =  143 bits (362), Expect = 9e-40
 Identities = 104/350 (29%), Positives = 164/350 (46%), Gaps = 30/350 (8%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYE+L + +GAS ++IK+AYRK+A+KYHPDKN+GN+EA   F E   AYEVL D   R
Sbjct: 3   RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKR 62

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMG------VNIQDIFSSFFGGGP-MEEDEKIVKGDDV 137
             YD +G    +      G  GG         +  DIF SFF G    +++ K  KG D+
Sbjct: 63  AQYDRFGHTAFEGGGGFEGFSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDL 122

Query: 138 IVELDATLEDLYMGGSLKVWREKNVI-KPAPGKRR--------CNCRNEVYHKQIGPGMF 188
             +++ +LED Y+G    +   +N++ +   GK+         CN  N       G G F
Sbjct: 123 TYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFF 182

Query: 189 QQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID 236
           +  T               C  C+     ++   + + I  G+ D Q++     G    D
Sbjct: 183 RVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPD 242

Query: 237 G-EPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI 295
             + GDL  +I   PH  F+R G +L+ T+ ++  QA +G E  I+ +    + I     
Sbjct: 243 NQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKG 302

Query: 296 TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           T+  E      EGMP+  + K G+L +  ++  P  L  +   ++ E L 
Sbjct: 303 TENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSN-AIKLLENLS 351

Length = 365

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score =  141 bits (357), Expect = 6e-39
 Identities = 108/347 (31%), Positives = 153/347 (44%), Gaps = 37/347 (10%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
           YYE+L V R AS ++IK AYRKLALKYHPD+N+  + A ++FA+IN AY VLSD+E R  
Sbjct: 4   YYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 87  YDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEED---EKIVKGDDVIVELDA 143
           YD +G         GG   GGMG +  DIF   FGG             +GDD+  E   
Sbjct: 63  YDRFG-TAPGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARI 121

Query: 144 TLEDLYMGGSLKVWREKNVI-------KPAPG---KRRC-NCRNE-------------VY 179
           TLE    G  ++V  ++          +  PG    + C  CR               V 
Sbjct: 122 TLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVE 181

Query: 180 HKQIGPGM--FQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDG 237
            +Q  P      Q+    C  C+      +   V V + +G+ +G  +     G     G
Sbjct: 182 TQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGG 241

Query: 238 EPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITK 297
             GDL   I   PH   RRE  +L     +   +A +G + T+  LD   V I  K  T+
Sbjct: 242 N-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQV-IEVKPGTQ 299

Query: 298 PKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
             ++ +  G+GMP       GDL + +E+  P  L+       +E L
Sbjct: 300 HGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLS----PEAREAL 342

Length = 371

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score =  134 bits (339), Expect = 4e-36
 Identities = 102/358 (28%), Positives = 147/358 (41%), Gaps = 48/358 (13%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           K YY+VL VP+ A++ +IK+AYRKLA +YHPD N+G+ +A +RF EI+ AY+VLSD + R
Sbjct: 9   KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKR 68

Query: 85  NIYDT----YGEEG-------------------LKQHAAGGGRGGGMGVNIQDIFSSFFG 121
             YD     +G  G                   L    A GG G G G  + D+F   F 
Sbjct: 69  KEYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFN 128

Query: 122 GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNV---------IKPAPGKRRC 172
            G      +  +G DV  E+  +  +   G ++ +                K     R C
Sbjct: 129 RGGRRTQPR--RGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVC 186

Query: 173 NCRNEVYHKQIGPGMFQ------------QMTEQVCDQCQNVKYEREGYFVTVDIEKGMQ 220
              +         G F              + +  C  C+     +    + V I  G+ 
Sbjct: 187 PTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVS 246

Query: 221 DGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKT 279
           DGQ +     G P   G P GDL   +   PH  F R G+NL  TV VT  +A +G E  
Sbjct: 247 DGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVR 306

Query: 280 IEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
           +  L    V +     T    V +  G+G        +GDL +T EV  P  L+   +
Sbjct: 307 VPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRK-DGTRGDLLVTVEVAVPKDLSGKAR 363

Length = 389

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  133 bits (336), Expect = 6e-36
 Identities = 106/365 (29%), Positives = 153/365 (41%), Gaps = 60/365 (16%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSET 83
           K YY++L V R AS E IK+A+R+LA K+HPD + GN+ EA ++F EI+ AYEVLSD + 
Sbjct: 3   KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQK 62

Query: 84  RNIYDTYGEEGLKQHAAGGGRGGGMGVN---------IQDIFSSFFGG------------ 122
           R  YD  G              GG   N         I DIF+  FGG            
Sbjct: 63  RRQYDQTGTVDFG--------AGGSNFNWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGN 114

Query: 123 GPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP------APGKRRCNCR- 175
                +  +    D+   LD +LED Y G   ++   +N + P      A   +   C  
Sbjct: 115 QQSTRNIDL----DIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPT 170

Query: 176 -NEVYHKQI--GPGMFQQMT--------------EQVCDQCQNVKYEREGYFVTVDIEKG 218
            +    ++I  G G F+ +T              E+ C +C           ++V I KG
Sbjct: 171 CHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKG 230

Query: 219 MQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEK 278
             D   +     G+    G  GDL   +R       +R  ++L+    +   QA +G E 
Sbjct: 231 ATDNLRLRVKGKGQ-SYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEI 289

Query: 279 TIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKT 338
            I+   E   ++     T+P EV K  G GMP    +  GDL +   V  P  LT  QK 
Sbjct: 290 EIKLFREKY-NLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKE 348

Query: 339 RIKEV 343
            I+E 
Sbjct: 349 LIREF 353

Length = 365

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score =  132 bits (333), Expect = 1e-35
 Identities = 100/356 (28%), Positives = 162/356 (45%), Gaps = 48/356 (13%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YY++L V + AS   +K+AY KLA +YHPD     ++A K+F EIN AY+VL D + R
Sbjct: 3   QDYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKR 61

Query: 85  NIYDTYGEEGL--KQHAAGGGRGGGMGVNIQDIFSSFF-----GGGPMEEDEKIVKGDDV 137
             YD +G +    +Q   GGG  GG   +I DIF  FF     G          V+G D+
Sbjct: 62  AAYDRFGHDAFQNQQSRGGGGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDL 121

Query: 138 IVELDATLEDLYMGGSLKVWREKNVIKPAPGK---------------RRCNCRNEVYHKQ 182
              L   LE+ + G       EKN+   +  K                 C+  + V   +
Sbjct: 122 KYNLTINLEEAFHG------IEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATR 175

Query: 183 IGPGMFQQMTEQVCDQCQNV---------------KYEREGYFVTVDIEKGMQDGQEVVF 227
           +  G F    EQ C +CQ                 +Y ++   ++V+I  G+++G  +  
Sbjct: 176 MQQGFF--TIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRN-LSVNIPAGVENGTRIRH 232

Query: 228 YEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEH 286
             +GE  I  G  GDL   I   PHD ++ +G NLH  + ++ V A +G E  +  ++  
Sbjct: 233 TGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGG 292

Query: 287 LVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKE 342
            V+++    T+  +  +   +GM    S  +GD+     V  P  L++ Q+  ++E
Sbjct: 293 KVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELLEE 348

Length = 372

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  126 bits (318), Expect = 4e-34
 Identities = 104/334 (31%), Positives = 145/334 (43%), Gaps = 75/334 (22%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           +A K YY +L VP+ AS ++IK+A++KLA KYHPD N+ +  A ++F EIN AY VLSD 
Sbjct: 1   MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDP 59

Query: 82  ETRNIYDTYGEEGLKQHAAG-----GGRGGGMGVNIQDIFSSFFG---GGP--------- 124
           E R IYDTYG         G      G G   G N+ D FS FF    GG          
Sbjct: 60  EKRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGD-FSDFFQQLFGGRGGFGGFGDL 118

Query: 125 -MEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQI 183
                 +  KG D+  EL  TLE+ Y GG      EK V                     
Sbjct: 119 FGSVGRRARKGRDLEAELPLTLEEAYRGG------EKVV--------------------- 151

Query: 184 GPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLK 243
                             V  ER    ++V I  G+++GQ +            + GDL 
Sbjct: 152 -----------------EVAGER----LSVRIPPGVREGQVIRL-----AGKGRQGGDLY 185

Query: 244 FRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRK 303
             +R  PH  FR EG++L+ TV V    A+VG +  +  LD   V+++    T+     +
Sbjct: 186 LVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLR 244

Query: 304 FGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
             G+G P      +GD Y    +  PT  T +++
Sbjct: 245 LKGKGWPRG-PAGRGDQYAEVRITIPTRPTPEEE 277

Length = 291

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score =  125 bits (315), Expect = 5e-33
 Identities = 102/356 (28%), Positives = 161/356 (45%), Gaps = 41/356 (11%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           ++ + YYEVL V R AS +++K+AYRKLA KYHPD N+   +A  +F E+  AY+ LSD 
Sbjct: 1   MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-PDAEDKFKEVKEAYDTLSDP 59

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVK-GDDVIVE 140
           + +  YD +G     Q   GGG G   G +  DIF  FFGGG    +    + G D+   
Sbjct: 60  QKKAHYDQFGHTDPNQGFGGGGAGDFGGFS--DIFDMFFGGGGGRRNPNAPRQGADLQYT 117

Query: 141 LDATLEDLYMGG--SLKVWREK----------------------------NVIKPAPGKR 170
           +    ++   G    +++ RE+                            NV +  P  R
Sbjct: 118 MTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGR 177

Query: 171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYED 230
             N R  V H   G G      +Q C  C      R+   + V +  G+  GQ++     
Sbjct: 178 VVNRR--VCHHCEGTGKI---IKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQ 232

Query: 231 GEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVD 289
           GE  ++G P GDL       PH+ F R+G++++  + +T  Q  +G E  +  L+   V 
Sbjct: 233 GEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VK 291

Query: 290 ISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG 345
           +     T+     +  G+G+P      +GD ++   V+ P  LTE +K  ++E  G
Sbjct: 292 LKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREFAG 347

Length = 371

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score =  124 bits (311), Expect = 2e-32
 Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 25/341 (7%)

Query: 26  SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85
           SYYE+L+V + ++ E IK++YRKLALKYHPD+N G++EA ++F  IN AY VLSD + R 
Sbjct: 4   SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRA 63

Query: 86  IYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFG-GGPMEEDEKIVKGDDVIVELDAT 144
           +YD YG++GL Q  A          ++   F   FG G    + +K     D +  ++ +
Sbjct: 64  LYDRYGKKGLNQAGASQSDFSDFFEDLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELS 123

Query: 145 LEDLYMG--GSLKVWREKNVIKPAPGK----------RRCNCRNEVYHKQIGPGMFQQ-- 190
            ++   G   ++KV + ++V +   G           ++CN + +V+ +Q G   F Q  
Sbjct: 124 FKEAVFGCKKTIKV-QYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQ-GFMSFAQTC 181

Query: 191 --------MTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDL 242
                   + +  C  C+   Y  +   +   I +G+ D   +V    G     G+ GDL
Sbjct: 182 GACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDL 241

Query: 243 KFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR 302
               R    + F+REG +L     V      +G    +  L    +++      + ++  
Sbjct: 242 YLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTF 301

Query: 303 KFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEV 343
            F  EG+    S+ +G L +  +V++P +L ++Q+  ++++
Sbjct: 302 AFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKL 342

Length = 369

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  114 bits (288), Expect = 3e-32
 Identities = 45/62 (72%), Positives = 51/62 (82%)

Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
          YYE+L VPR ASDE+IK+AYRKLALKYHPDKN G+  A ++F EIN AYEVLSD E R I
Sbjct: 2  YYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRAI 61

Query: 87 YD 88
          YD
Sbjct: 62 YD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score =  123 bits (309), Expect = 5e-32
 Identities = 95/363 (26%), Positives = 162/363 (44%), Gaps = 46/363 (12%)

Query: 22  IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
           +  K YYEVL V + AS+++I++AYRKLA +YHPD N+ + +A+ +  EIN A +VL D 
Sbjct: 1   MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDK 59

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGGM-----------GVNIQDIFSSFFGGGPMEEDEK 130
           + R  YD +G       +      G               +  +IFS FFG     + ++
Sbjct: 60  DKRKQYDQFGHAAFDGSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSN-KSDYQR 118

Query: 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIK----------PAPGK----RRCNCRN 176
             KG  V +++  T ++L  G    +  E +++            +         C+   
Sbjct: 119 STKGQSVSLDIYLTFKELLFGVDKII--ELDLLTNCSKCFGSGAESNSDIHICNNCHGTG 176

Query: 177 EVY-HKQIGPGMFQQ-MTEQVCD--------QCQNVK---YEREGYFVTVDIEKGMQDGQ 223
           EV   K +G   FQQ     VC+        +C+N K      E   + V+I KG++  Q
Sbjct: 177 EVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQ 236

Query: 224 EVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNN-LHTTVTVTLVQALVGFEKTIE 281
           ++   + G   ++ G  GDL   I       F    NN +  T  ++ + A++G E  I+
Sbjct: 237 QIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIK 296

Query: 282 HLDEHLVDISTKGITKPKEVRKFGGEGMPLHF-SNKKGDLYITFEVLFPTTLTEDQKTRI 340
            LD  +     K I    E+     +G+      +K+GDL I   ++ P  L++ +K  I
Sbjct: 297 TLDGDIKYKLPKSINS-NELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELI 355

Query: 341 KEV 343
           +++
Sbjct: 356 EQI 358

Length = 372

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score =  119 bits (299), Expect = 2e-30
 Identities = 102/371 (27%), Positives = 151/371 (40%), Gaps = 66/371 (17%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
             K +Y+ L V   AS E+IK+AYRKLA + HPD N G+  A +RF  ++ A++VLSD  
Sbjct: 7   VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPA 66

Query: 83  TRNIYDTY------GEEGLKQHAAGGGRGG---------------------GMGVNIQDI 115
            R  YD        G  G ++   GGG GG                     G G  I D+
Sbjct: 67  KRKEYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDL 126

Query: 116 FSSFFG-GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAP------- 167
           F   F  GG      +  +G+D  +E + TL+  ++  +  V     +  PAP       
Sbjct: 127 FGGLFNRGGGSARPSRPRRGND--LETETTLD--FVEAAKGVTMPLRLTSPAPCTTCHGS 182

Query: 168 GKR---------RCNCRNEVYHKQIGPGMFQ------------QMTEQVCDQCQNVKYER 206
           G R          CN    +   Q   G F              + E  C++C+      
Sbjct: 183 GARPGTSPKVCPTCNGSGVISRNQ---GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTT 239

Query: 207 EGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHDRFRREGNNLHTTV 265
               + V I  G++DGQ +     GE  + G P GDL   +   P   F R+G++L  TV
Sbjct: 240 RTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTV 299

Query: 266 TVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFE 325
            V+  +  +G   ++  LD   V +     T    + +  G G+P   S   GDL +T +
Sbjct: 300 PVSFTELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKR-SGGAGDLLVTVK 357

Query: 326 VLFPTTLTEDQ 336
           V  P  L    
Sbjct: 358 VAVPPNLDGAA 368

Length = 392

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score =  104 bits (261), Expect = 2e-28
 Identities = 38/54 (70%), Positives = 45/54 (83%)

Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
          YY++L VP  ASDE+IK+AYRKLALKYHPDKN  + EA ++F EIN AYEVLSD
Sbjct: 2  YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 98.8 bits (247), Expect = 3e-26
 Identities = 41/59 (69%), Positives = 48/59 (81%), Gaps = 1/59 (1%)

Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSE 82
            YYE+L VPR AS ++IK+AYRKLALKYHPDKN G+ EEA ++F EIN AYEVLSD E
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59

Length = 60

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 94.9 bits (235), Expect = 9e-23
 Identities = 60/242 (24%), Positives = 95/242 (39%), Gaps = 25/242 (10%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG-NEEANKRFAEINNAYEVLSDSET 83
             YYE+L VP  AS E+IK+AYRKLALKYHPD+N G  + A ++F EIN AYE+LSD E 
Sbjct: 6   LDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPER 65

Query: 84  RNIYDTYGEEG---LKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVE 140
           R  YD  G +     K +           + +  ++  + G     E +           
Sbjct: 66  RAEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERK----------- 114

Query: 141 LDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQ 200
             A+L DL   G   +    ++            R+    ++           +      
Sbjct: 115 --ASLADLLSRGLSGLAAALSLFADEAAL-----RSGSL-RRRDLAANLADNFEEALAGV 166

Query: 201 NVKYEREGY-FVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGN 259
                R     +   I+ G  +G+ +      +    G  G  + +  +  H  F  EG+
Sbjct: 167 KKAVARLLGKALKSTIKAGALEGKALRLKGLLKSA-RGALGKARLKELSKRHPPFALEGD 225

Query: 260 NL 261
           + 
Sbjct: 226 DK 227

Length = 237

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 89.5 bits (223), Expect = 1e-22
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 260 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLH-FSNKKG 318
           +L+ T+ ++L +AL+G    +  LD   V I     T+P +  +  G+GMP++   N +G
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 319 DLYITFEVLFPTTLTEDQK 337
           DL +T  V  P  L+ +QK
Sbjct: 61  DLIVTLNVKIPKKLSSEQK 79

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 93.3 bits (232), Expect = 1e-21
 Identities = 95/328 (28%), Positives = 136/328 (41%), Gaps = 60/328 (18%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           K YY ++ V      + IK AYR+LA KYHPD ++   +A  RF E+  A+EVLSD + R
Sbjct: 4   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP-DAEARFKEVAEAWEVLSDEQRR 62

Query: 85  NIYDTYGEEGLKQH----------AAGGGRGGGMGVNIQDIFSSFFGG-GPMEEDEKIVK 133
             YD      L QH            G G+      +  DIFSS FG            +
Sbjct: 63  AEYDQ-----LWQHRNDPQFNRQFQHGDGQSFNAE-DFDDIFSSIFGQHARQSRQRPAAR 116

Query: 134 GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTE 193
           G D+ +E+   LE+                     KR  +    VY+   G      M E
Sbjct: 117 GHDIEIEVAVFLEETL----------------TEHKRTISYNLPVYN-AFG------MIE 153

Query: 194 QVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP-GDLKFRIRTAPHD 252
           Q   +  NVK           I  G+ +GQ +     G P  +G P GDL   I  APH 
Sbjct: 154 QEIPKTLNVK-----------IPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHP 202

Query: 253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLH 312
            F   G +L   V +   +A +G + T+  L E ++     G    + +R   G+G+   
Sbjct: 203 LFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLR-VKGKGL--- 258

Query: 313 FSNKK-GDLYITFEVLFPTTLTEDQKTR 339
            S K+ GDLY   +++ P     D+KT 
Sbjct: 259 VSKKQTGDLYAVLKIVMPP--KPDEKTA 284

Length = 306

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 91.0 bits (225), Expect = 4e-20
 Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 11/97 (11%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YYEVL + R A +++IK+A+RKLA KYHPD+N+   +A   FAEIN A +VLS+ + R
Sbjct: 2   RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNK-APDAASIFAEINEANDVLSNPKKR 60

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQ-DIFSSFF 120
             YD YG +G+ +             + Q D+F+SFF
Sbjct: 61  ANYDKYGHDGVDRED---------DFDFQADVFNSFF 88

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 72.3 bits (177), Expect = 6e-14
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)

Query: 28  YEVLQVPRGASDEQIKRAYRKLALKYHPDK-----NQGNEEANKRFAEINNAYEVLSDSE 82
           YE+L + +  S+  IK+ YR L++K+HPDK     N+   E  +++  I  AY +L+D +
Sbjct: 101 YEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK 160

Query: 83  TRNIYDTYGEEGLKQHAAGG 102
            R  Y  YG     QH + G
Sbjct: 161 RRENYLNYGTPDSPQHTSEG 180

Length = 610

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 52.9 bits (126), Expect = 1e-07
 Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
           +Y++L V   A  ++I   Y KLA  Y+P K  GNE  +K F +IN AY++L D + + +
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHK-FKKINEAYQILGDIDKKKM 633

Query: 87  YDTYGEEGLKQ 97
           Y+ +G +G+K 
Sbjct: 634 YNKFGYDGIKG 644

Length = 1136

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 50.2 bits (121), Expect = 5e-07
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 7/58 (12%)

Query: 28  YEVLQVPRGASDEQIKRAYRKLALKYHPDK--NQG-NEE----ANKRFAEINNAYEVL 78
           Y+VL V     D++IKRAYRKL  ++HPDK   +G   E    A ++  EI  AYE++
Sbjct: 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELI 260

Length = 267

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 37  ASDEQIKRAYRKLALKYHPDKNQGNEEANKR--FAEINNAYEVLSDSETRNIYDT 89
           A   QI +A++K   KYHPDK            F  I  A EVL D + R  YD+
Sbjct: 58  AIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDS 112

Length = 379

>gnl|CDD|224002 COG1076, DjlA, DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 28  YEVLQVPRGASDEQIKRAYRKLALKYHPDK--NQGN-----EEANKRFAEINNAYE 76
            +VL V   A  + IK+AYRKL  + HPDK   +G      E+  ++  EI  AYE
Sbjct: 116 LKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYE 171

Length = 174

>gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional

 Score = 42.9 bits (101), Expect = 4e-05
 Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query: 26 SYYEVLQVPRGASD--EQIKRAYRKLALKYHPDKNQGNEEANKRF---AEINNAYEVLSD 80
          +Y+++L +P+  +   + +++ Y  + +KYHPDK +  +E  +     +E+NNAY  L D
Sbjct: 3  NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKD 62

Query: 81 SETRNIY 87
          +  R  Y
Sbjct: 63 ALKRAEY 69

Length = 166

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 6/56 (10%)

Query: 29 EVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          ++L +PR A  +   +++AY +  L++HPDK  G+EE  K   E+N  Y+   +S 
Sbjct: 9  DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKG-GDEEKMK---ELNTLYKKFRESV 60

Length = 153

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 40.7 bits (96), Expect = 0.001
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 6/55 (10%)

Query: 29 EVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS 81
          ++L +P  A  +   +++AY +   +YHPDK  G+EE  KR   +N+ Y+ L + 
Sbjct: 15 DLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG-GDEEKMKR---LNSLYKKLQEG 65

Length = 647

>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 4/51 (7%)

Query: 28  YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVL 78
           Y++L +   AS E+I+ A+++L L+ HPD       A+K    +N A ++L
Sbjct: 68  YKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASK----VNEAKDLL 114

Length = 116

>gnl|CDD|235133 PRK03578, hscB, co-chaperone HscB; Provisional

 Score = 37.3 bits (87), Expect = 0.004
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 7/69 (10%)

Query: 26 SYYEVLQVPRG-ASDEQ-IKRAYRKLALKYHPDKNQGNEEANKRFA-----EINNAYEVL 78
           ++ +  +P   A DE  +  AYR +  + HPD+     +A KR A       N AY+ L
Sbjct: 7  DHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTL 66

Query: 79 SDSETRNIY 87
           D   R  Y
Sbjct: 67 RDPLKRARY 75

Length = 176

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.92
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.87
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.81
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.81
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.79
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.78
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.76
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.76
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.73
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.72
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.71
PHA03102	153	Small T antigen; Reviewed	99.7
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.66
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.65
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.63
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.58
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.51
PRK05014	171	hscB co-chaperone HscB; Provisional	99.48
PRK01356	166	hscB co-chaperone HscB; Provisional	99.46
PRK00294	173	hscB co-chaperone HscB; Provisional	99.43
PRK03578	176	hscB co-chaperone HscB; Provisional	99.43
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.35
PTZ00100	116	DnaJ chaperone protein; Provisional	99.35
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.28
PHA02624	647	large T antigen; Provisional	99.23
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.23
PRK01773	173	hscB co-chaperone HscB; Provisional	99.03
PRK14282	369	chaperone protein DnaJ; Provisional	98.97
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.94
PRK14299	291	chaperone protein DnaJ; Provisional	98.93
PRK14290	365	chaperone protein DnaJ; Provisional	98.88
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.84
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.84
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.83
PRK14294	366	chaperone protein DnaJ; Provisional	98.82
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.81
PRK14285	365	chaperone protein DnaJ; Provisional	98.8
PRK14284	391	chaperone protein DnaJ; Provisional	98.76
PRK10767	371	chaperone protein DnaJ; Provisional	98.73
PRK14298	377	chaperone protein DnaJ; Provisional	98.73
PRK14289	386	chaperone protein DnaJ; Provisional	98.7
PRK14300	372	chaperone protein DnaJ; Provisional	98.68
PRK14287	371	chaperone protein DnaJ; Provisional	98.68
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	98.67
PRK14279	392	chaperone protein DnaJ; Provisional	98.66
PRK14301	373	chaperone protein DnaJ; Provisional	98.65
PRK14293	374	chaperone protein DnaJ; Provisional	98.61
PRK14295	389	chaperone protein DnaJ; Provisional	98.61
PRK14291	382	chaperone protein DnaJ; Provisional	98.59
PRK14288	369	chaperone protein DnaJ; Provisional	98.58
PRK14276	380	chaperone protein DnaJ; Provisional	98.53
PRK14286	372	chaperone protein DnaJ; Provisional	98.5
PRK14280	376	chaperone protein DnaJ; Provisional	98.48
PRK14278	378	chaperone protein DnaJ; Provisional	98.48
PRK14292	371	chaperone protein DnaJ; Provisional	98.47
PRK14281	397	chaperone protein DnaJ; Provisional	98.46
PRK14283	378	chaperone protein DnaJ; Provisional	98.43
PRK14297	380	chaperone protein DnaJ; Provisional	98.42
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.37
PRK14277	386	chaperone protein DnaJ; Provisional	98.36
PRK14296	372	chaperone protein DnaJ; Provisional	98.33
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.33
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.29
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.27
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.26
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	98.2
TIGR02642	186	phage_xxxx uncharacterized phage protein. This unc	97.31
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.1
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	96.63
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.19
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	96.09
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.84
KOG0431	453	consensus Auxilin-like protein and related protein	94.59
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	94.4
PLN03165	111	chaperone protein dnaJ-related; Provisional	94.39
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	86.4
PF00684	66	DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR0	85.99
KOG0724	335	consensus Zuotin and related molecular chaperones	81.79
PF13446	62	RPT: A repeated domain in UCH-protein	80.17

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.4e-89  Score=646.42  Aligned_cols=321  Identities=36%  Similarity=0.625  Sum_probs=288.3

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG  101 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~  101 (345)
                      ++.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|+|||||||||+||++||+||..+++++.++
T Consensus         1 ~~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           1 MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CCccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            35789999999999999999999999999999999999899999999999999999999999999999999988633322


Q ss_pred             CCCCCCcccChhhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162          102 GGRGGGMGVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---------  169 (345)
Q Consensus       102 ~~~~~~~~~~~~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---------  169 (345)
                      +...++|+.++.|||++|||++..  ++++++++|.|+.+.|+|||+|||+|+++++.+++.+.|+ |+|+         
T Consensus        81 g~g~~~fgg~~~DIF~~~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~  160 (371)
T COG0484          81 GFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPK  160 (371)
T ss_pred             CCCcCCCCCCHHHHHHHhhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCC
Confidence            211123333789999999976542  3344577999999999999999999999999999999999 9876         


Q ss_pred             --cCCCccceEEEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162          170 --RRCNCRNEVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI  235 (345)
Q Consensus       170 --~~C~G~G~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~  235 (345)
                        ++|+|+|++...+.. |++++.+            +++|++|+|.|++.+.++++|+||+|+.+|++|+++|+|++.+
T Consensus       161 tC~tC~G~G~v~~~~~~-g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~  239 (371)
T COG0484         161 TCPTCNGSGQVRTVQRT-GFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGP  239 (371)
T ss_pred             cCCCCCCcCeEEEEEee-eEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCC
Confidence              579999996655433 5555433            8899999999999999999999999999999999999999965


Q ss_pred             -CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCC
Q 019162          236 -DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS  314 (345)
Q Consensus       236 -~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~  314 (345)
                       ++++|||||+|+|++|+.|.|+|+||+++++||+.+|++|+++.|+||||+ ++|+||+++++|+++||+|+|||...+
T Consensus       240 ~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~~  318 (371)
T COG0484         240 NGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLRS  318 (371)
T ss_pred             CCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccCC
Confidence             677899999999999999999999999999999999999999999999998 999999999999999999999998777


Q ss_pred             CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          315 NKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       315 ~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      ..+|||||+|+|.+|++||.+|+++|+++.
T Consensus       319 ~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~  348 (371)
T COG0484         319 GGRGDLYVRVKVETPKNLSDEQKELLEEFA  348 (371)
T ss_pred             CCcCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            767999999999999999999999999985

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.1e-79  Score=589.53  Aligned_cols=317  Identities=27%  Similarity=0.519  Sum_probs=275.5

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC-C
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-G  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-~  102 (345)
                      ..|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||++++..+.++ .
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~~~   81 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGASQS   81 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCCcc
Confidence            579999999999999999999999999999999998778899999999999999999999999999999876531110 0


Q ss_pred             CCCCCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------c
Q 019162          103 GRGGGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------R  170 (345)
Q Consensus       103 ~~~~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~  170 (345)
                      +++..|+ ++.++|++|||++.. ....+.++++|+.+.|+|||+|+|+|+++++.+++.+.|+ |.|+          +
T Consensus        82 ~~~~~f~-~~~~~F~~~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~  160 (369)
T PRK14288         82 DFSDFFE-DLGSFFEDAFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCK  160 (369)
T ss_pred             ccccchh-hHHHHHHhhcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCC
Confidence            1111111 445688888874321 1122346799999999999999999999999999999998 8774          4


Q ss_pred             CCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCC
Q 019162          171 RCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGE  238 (345)
Q Consensus       171 ~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~  238 (345)
                      .|+|+|.+...+   |++++.            ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.+++.
T Consensus       161 ~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~  237 (369)
T PRK14288        161 QCNGQGQVFMRQ---GFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGK  237 (369)
T ss_pred             CCCCCcEEEEEe---ceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCC
Confidence            689999865443   444332            27789999999999999999999999999999999999999988889


Q ss_pred             CceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCC
Q 019162          239 PGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKG  318 (345)
Q Consensus       239 ~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~G  318 (345)
                      +|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.+.|++|+++++|++++|+|+|||..+...+|
T Consensus       238 ~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~G  317 (369)
T PRK14288        238 RGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPESSYRG  317 (369)
T ss_pred             CCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCC
Confidence            99999999999999999999999999999999999999999999999889999999999999999999999977654569


Q ss_pred             cEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          319 DLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       319 DL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      ||||+|+|.||++|+++|+++|+++|
T Consensus       318 DL~v~~~v~~P~~ls~~q~~~l~~~~  343 (369)
T PRK14288        318 SLIVELQVIYPKSLNKEQQELLEKLH  343 (369)
T ss_pred             CEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999987

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.2e-78  Score=585.61  Aligned_cols=318  Identities=28%  Similarity=0.488  Sum_probs=275.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-CC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-GG  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~~  102 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||+|||||++|+.||+||++++..+.+ ++
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~-~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~   81 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSS   81 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCc
Confidence            579999999999999999999999999999999998 5779999999999999999999999999999987653111 00


Q ss_pred             CCCC-----------CcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-
Q 019162          103 GRGG-----------GMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-  169 (345)
Q Consensus       103 ~~~~-----------~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-  169 (345)
                      ++++           ++ .++.|+|++|||++.. ..++.+++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+ 
T Consensus        82 ~~~~~~~~~~~~~~~g~-~~f~d~f~~~fggg~~-~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G  159 (372)
T PRK14296         82 NFGDFEDLFSNMGSSGF-SSFTNIFSDFFGSNKS-DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSG  159 (372)
T ss_pred             CCCcccccccccccccc-ccchhhhhhhcCCCcc-CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCc
Confidence            1010           11 1466899999985421 123346799999999999999999999999999999999 8874 


Q ss_pred             ----------cCCCccceE-EEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEE
Q 019162          170 ----------RRCNCRNEV-YHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVV  226 (345)
Q Consensus       170 ----------~~C~G~G~~-~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~  226 (345)
                                +.|+|+|.+ ..++.|+.++++.            ..++|++|+|.|++.+.++++|.||+|+++|++|+
T Consensus       160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~  239 (372)
T PRK14296        160 AESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIK  239 (372)
T ss_pred             cCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEE
Confidence                      468999985 4445677544432            27789999999999999999999999999999999


Q ss_pred             EeecCCCC-CCCCCceEEEEEEEcCCCCcccc-cCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEE
Q 019162          227 FYEDGEPK-IDGEPGDLKFRIRTAPHDRFRRE-GNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKF  304 (345)
Q Consensus       227 ~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~-g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri  304 (345)
                      |+|+|++. +++.+|||+|+|+++||+.|+|+ |+||+++++|||+|||+|+++.|+||||+ +.|+||+++++|++++|
T Consensus       240 ~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri  318 (372)
T PRK14296        240 LSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIII  318 (372)
T ss_pred             EeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEE
Confidence            99999985 57789999999999999999995 89999999999999999999999999997 89999999999999999


Q ss_pred             CCCCcCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          305 GGEGMPLHF-SNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       305 ~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      +|+|||... ...+|||||+|+|.||+.||++|+++|+++++
T Consensus       319 ~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~  360 (372)
T PRK14296        319 NNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYE  360 (372)
T ss_pred             cCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999653 33469999999999999999999999999874

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.2e-77  Score=576.10  Aligned_cols=319  Identities=31%  Similarity=0.556  Sum_probs=276.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||++++..+.++.+
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG   82 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence            47999999999999999999999999999999999877889999999999999999999999999999987753211101


Q ss_pred             CC--CCcc---cChhhhhhhhcCCCC-C----CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---
Q 019162          104 RG--GGMG---VNIQDIFSSFFGGGP-M----EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---  169 (345)
Q Consensus       104 ~~--~~~~---~~~~d~F~~~fg~~~-~----~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---  169 (345)
                      .+  ++++   .++.|+|++|||++. .    ....+.++++|+++.|+|||||+|+|+++++.+++.+.|+ |.|+   
T Consensus        83 ~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~  162 (372)
T PRK14286         83 QGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGAS  162 (372)
T ss_pred             CCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcC
Confidence            00  1111   257799999998532 1    1112346799999999999999999999999999999999 8874   


Q ss_pred             --------cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEee
Q 019162          170 --------RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE  229 (345)
Q Consensus       170 --------~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g  229 (345)
                              +.|+|+|.+...+   |++++.            ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|
T Consensus       163 ~~~~~~~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g  239 (372)
T PRK14286        163 KGSSPTTCPDCGGSGQIRRTQ---GFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSG  239 (372)
T ss_pred             CCCCCccCCCCcCeEEEEEEe---ceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECC
Confidence                    4688888765443   444322            26789999999999999999999999999999999999


Q ss_pred             cCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCC
Q 019162          230 DGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEG  308 (345)
Q Consensus       230 ~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G  308 (345)
                      +|++.+ +..+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+||||+.+.|+||+++++|++++|+|+|
T Consensus       240 ~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G  319 (372)
T PRK14286        240 EGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHG  319 (372)
T ss_pred             ccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCC
Confidence            999965 4567999999999999999999999999999999999999999999999998999999999999999999999


Q ss_pred             cCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          309 MPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       309 ~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ||..+...+|||||+|+|.||+.||++|+++|+++|+
T Consensus       320 ~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  356 (372)
T PRK14286        320 MPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEEFAR  356 (372)
T ss_pred             CCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            9987655579999999999999999999999999873

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=4e-77  Score=583.52  Aligned_cols=311  Identities=37%  Similarity=0.663  Sum_probs=274.8

Q ss_pred             hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCc
Q 019162           20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA   99 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~   99 (345)
                      ..+..+|||++|||+++||.+|||+|||+||++||||+|+ +   .++|++|++||++||||.+|+.||+||++++..+.
T Consensus        23 ~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~-~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~   98 (421)
T PTZ00037         23 REVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGG-D---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE   98 (421)
T ss_pred             ccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCc-h---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC
Confidence            3344689999999999999999999999999999999997 3   37999999999999999999999999988764211


Q ss_pred             CCCCCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162          100 AGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---------  169 (345)
Q Consensus       100 ~~~~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---------  169 (345)
                            +  +.++.|+|+.|||++..  ..+.+++.|+.+.|.|||+|+|+|+++++.+++.+.|+ |.|+         
T Consensus        99 ------~--~~d~~d~f~~~Fggg~~--~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~  168 (421)
T PTZ00037         99 ------Q--PADASDLFDLIFGGGRK--PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVD  168 (421)
T ss_pred             ------C--CcchhhhHHHhhccccc--cccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCcc
Confidence                  1  12678999999986421  12346799999999999999999999999999999999 8875         


Q ss_pred             -cCCCccce-EEEEEecCceEEEEe---------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162          170 -RRCNCRNE-VYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE  232 (345)
Q Consensus       170 -~~C~G~G~-~~~~~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~  232 (345)
                       +.|+|+|. +...+.++ ++++++               .++|++|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus       169 C~~C~G~G~~~~~~~~g~-~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd  247 (421)
T PTZ00037        169 CKLCNGQGIRVQIRQMGS-MIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEAD  247 (421)
T ss_pred             CCCCCCCCeEEEEEeecc-eeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccC
Confidence             47899998 44455666 444332               3789999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcC
Q 019162          233 PKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMP  310 (345)
Q Consensus       233 ~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p  310 (345)
                      +.+++.||||+|+|+++||+.|+|+|+||+++++|||+|||+|+++.|+||||+.+.|++|++  +++|++++|+|+|||
T Consensus       248 ~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP  327 (421)
T PTZ00037        248 EKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMP  327 (421)
T ss_pred             CCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcc
Confidence            988899999999999999999999999999999999999999999999999998899999966  999999999999999


Q ss_pred             CCCC-CCCCcEEEEEEEECC--CCCCHHHHHHHHHHhC
Q 019162          311 LHFS-NKKGDLYITFEVLFP--TTLTEDQKTRIKEVLG  345 (345)
Q Consensus       311 ~~~~-~~~GDL~v~~~v~~P--~~l~~~q~~~l~~~l~  345 (345)
                      ..+. ..+|||||+|+|.||  +.||++|+++|+++|.
T Consensus       328 ~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~  365 (421)
T PTZ00037        328 TYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP  365 (421)
T ss_pred             cCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhcc
Confidence            7654 357999999999999  9999999999999873

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.2e-76  Score=572.26  Aligned_cols=319  Identities=36%  Similarity=0.580  Sum_probs=276.3

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++....+..+++
T Consensus         2 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~-~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~~g   80 (378)
T PRK14278          2 ARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP-DEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGGGG   80 (378)
T ss_pred             CCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCC-cHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCCCC
Confidence            479999999999999999999999999999999998 6789999999999999999999999999999863321111111


Q ss_pred             CCCCcccChhhhhhhhcCCCCCC-C-ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162          104 RGGGMGVNIQDIFSSFFGGGPME-E-DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------  169 (345)
Q Consensus       104 ~~~~~~~~~~d~F~~~fg~~~~~-~-~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------  169 (345)
                      ++++|+ ++.|+|++|||++..+ . ....+++.|+++.|+|||+|+|+|+++++.+++.+.|+ |.|+           
T Consensus        81 ~~~~f~-~~~d~f~~ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C  159 (378)
T PRK14278         81 FGGGFG-GLGDVFEAFFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTC  159 (378)
T ss_pred             CCcCcC-chhHHHHHHhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceec
Confidence            111222 4679999999853211 1 12345799999999999999999999999999999999 8875           


Q ss_pred             cCCCccceEEE-EEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCC
Q 019162          170 RRCNCRNEVYH-KQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID  236 (345)
Q Consensus       170 ~~C~G~G~~~~-~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~  236 (345)
                      ..|+|+|.+.. .+.++|++++.+            .++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++.++
T Consensus       160 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~  239 (378)
T PRK14278        160 DTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPG  239 (378)
T ss_pred             CCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCC
Confidence            46899998544 345677775433            77899999999999999999999999999999999999999764


Q ss_pred             -CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162          237 -GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN  315 (345)
Q Consensus       237 -~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~  315 (345)
                       +.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+|+..+.|.||+++++|++++|+|+|||..+..
T Consensus       240 ~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~  319 (378)
T PRK14278        240 GGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRSG  319 (378)
T ss_pred             CCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCCCC
Confidence             5679999999999999999999999999999999999999999999977689999999999999999999999976655


Q ss_pred             CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      .+|||||+|+|.||+.||++|+++|++++
T Consensus       320 ~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~  348 (378)
T PRK14278        320 GRGDLHAHVEVVVPTRLDHEDIELLRELK  348 (378)
T ss_pred             CCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999987

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4e-76  Score=571.85  Aligned_cols=318  Identities=31%  Similarity=0.517  Sum_probs=276.5

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG-  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~-  102 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||+++++.+.+++ 
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~   82 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAED   82 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccC-ChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCccc
Confidence            479999999999999999999999999999999998 577889999999999999999999999999988765321110 


Q ss_pred             CCC-CCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162          103 GRG-GGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------  169 (345)
Q Consensus       103 ~~~-~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------  169 (345)
                      +++ ++++ ++.|+|++|||++......+.+++.|+++.++|||+|+|+|+++++.+++.+.|+ |.|+           
T Consensus        83 ~~~~~~~~-~~~d~f~~~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C  161 (377)
T PRK14298         83 IFRGADFG-GFGDIFEMFFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRC  161 (377)
T ss_pred             ccccCCcC-cchhhhHhhhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcC
Confidence            111 1222 4679999999863211123356899999999999999999999999999999999 8774           


Q ss_pred             cCCCccceEEEEEecC-ceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-C
Q 019162          170 RRCNCRNEVYHKQIGP-GMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-I  235 (345)
Q Consensus       170 ~~C~G~G~~~~~~~~~-g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~  235 (345)
                      +.|+|+|.+...+..+ |++++.+            .++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++. +
T Consensus       162 ~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~  241 (377)
T PRK14298        162 PTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSP  241 (377)
T ss_pred             CCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCC
Confidence            4689999865544344 4443222            778999999999999999999999999999999999999994 5


Q ss_pred             CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162          236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN  315 (345)
Q Consensus       236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~  315 (345)
                      ++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..++.
T Consensus       242 ~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~~~  320 (377)
T PRK14298        242 GAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLHGH  320 (377)
T ss_pred             CCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCCCC
Confidence            788999999999999999999999999999999999999999999999997 8999999999999999999999986655


Q ss_pred             CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      .+|||||+|+|.||+.|+++|+++|++++
T Consensus       321 ~~GDL~V~~~V~~P~~ls~~~~~ll~~l~  349 (377)
T PRK14298        321 GKGDQLVKVIVKTPTKLTQEQKELLREFD  349 (377)
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999987

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.3e-76  Score=568.16  Aligned_cols=319  Identities=32%  Similarity=0.569  Sum_probs=277.7

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+.++
T Consensus         2 ~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~   81 (365)
T PRK14285          2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEG   81 (365)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCccc
Confidence            47999999999999999999999999999999999877889999999999999999999999999999987653211101


Q ss_pred             CCCC---cc---cChhhhhhhhcCCCCCC-CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162          104 RGGG---MG---VNIQDIFSSFFGGGPME-EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------  169 (345)
Q Consensus       104 ~~~~---~~---~~~~d~F~~~fg~~~~~-~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------  169 (345)
                      +.++   ++   .++.|+|++|||++... +....+++.|+++++.|||||+|+|+++++.+++.+.|+ |.|+      
T Consensus        82 ~~~g~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  161 (365)
T PRK14285         82 FSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGT  161 (365)
T ss_pred             cCCCccccccccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCC
Confidence            1111   11   25779999999853211 112346799999999999999999999999999999999 8775      


Q ss_pred             -----cCCCccceEEEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162          170 -----RRCNCRNEVYHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE  232 (345)
Q Consensus       170 -----~~C~G~G~~~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~  232 (345)
                           ..|+|+|.+..   ++|++++.+            .++|++|+|.|++.+.++++|.||||+++|++|+|+|+|+
T Consensus       162 ~~~~C~~C~G~G~~~~---~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~  238 (365)
T PRK14285        162 SPSICNMCNGSGRVMQ---GGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGS  238 (365)
T ss_pred             CCccCCCccCceeEEe---cCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccc
Confidence                 46888887543   456664322            7889999999999999999999999999999999999999


Q ss_pred             CCCC-CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162          233 PKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL  311 (345)
Q Consensus       233 ~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~  311 (345)
                      +.++ +.+|||+|+|++++|+.|+|+|+||+++++|||.||++|++++|+||||+.+.|.||+++++|++++|+|+|||.
T Consensus       239 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~  318 (365)
T PRK14285        239 VNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPI  318 (365)
T ss_pred             cCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccC
Confidence            9764 568999999999999999999999999999999999999999999999988999999999999999999999998


Q ss_pred             CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      .+...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       319 ~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~  352 (365)
T PRK14285        319 LHTEKFGNLILIIKIKTPKNLNSNAIKLLENLSK  352 (365)
T ss_pred             CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            7655569999999999999999999999999873

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-75  Score=568.03  Aligned_cols=317  Identities=29%  Similarity=0.521  Sum_probs=278.1

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      ..|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~~~   81 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGGGG   81 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCCCC
Confidence            479999999999999999999999999999999998 5778999999999999999999999999999987653211111


Q ss_pred             CCCCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------c
Q 019162          104 RGGGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------R  170 (345)
Q Consensus       104 ~~~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------~  170 (345)
                       .++|+ ++.|+|++|||++.. +.....+++.|+++.++|||+|+|+|+++++.+++.+.|+ |.|+           +
T Consensus        82 -~~~f~-~~~d~f~~~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~  159 (371)
T PRK14287         82 -AGDFG-GFSDIFDMFFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCS  159 (371)
T ss_pred             -Ccccc-chHHHHHhhhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccC
Confidence             11222 467999999985321 1112345799999999999999999999999999999999 8764           4


Q ss_pred             CCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-CC
Q 019162          171 RCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-ID  236 (345)
Q Consensus       171 ~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~  236 (345)
                      .|+|+|.+ ..+++++|++++.+            .++|..|+|.+++.+.++++|.||+|+++|++|+|+|+|++. .+
T Consensus       160 ~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~  239 (371)
T PRK14287        160 HCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNG  239 (371)
T ss_pred             CCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCC
Confidence            68999985 44567888887533            667899999999999999999999999999999999999996 45


Q ss_pred             CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCC
Q 019162          237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK  316 (345)
Q Consensus       237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~  316 (345)
                      +.+|||+|+|+++||+.|+|+|+||++++.|||.||++|++++|+|+||+ +.|+||+++++|++++|+|+|||..+++.
T Consensus       240 ~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~~~~  318 (371)
T PRK14287        240 GPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVHGRG  318 (371)
T ss_pred             CCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCCCCC
Confidence            67899999999999999999999999999999999999999999999997 89999999999999999999999766555


Q ss_pred             CCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          317 KGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       317 ~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +|||||+|+|.+|+.|+.+|+++|++++
T Consensus       319 ~GDL~V~~~v~~P~~l~~~q~~ll~~l~  346 (371)
T PRK14287        319 QGDQHVQVRVVTPKNLTEKEKELMREFA  346 (371)
T ss_pred             CCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            7999999999999999999999999987

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.3e-76  Score=571.99  Aligned_cols=321  Identities=33%  Similarity=0.549  Sum_probs=278.1

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G  101 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~  101 (345)
                      +.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+.. +
T Consensus         3 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14277          3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ   82 (386)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence            457999999999999999999999999999999999877889999999999999999999999999999987753211 1


Q ss_pred             C-----CCC-CCcc---cChhhhhhhhcCCC----CCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CC
Q 019162          102 G-----GRG-GGMG---VNIQDIFSSFFGGG----PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-AP  167 (345)
Q Consensus       102 ~-----~~~-~~~~---~~~~d~F~~~fg~~----~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~  167 (345)
                      +     +++ ++++   .++.|+|++||++.    ........+++.|+++.|+|||+|+|+|+++++.+++.+.|+ |.
T Consensus        83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~  162 (386)
T PRK14277         83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCK  162 (386)
T ss_pred             CCcCCCCccccCccccccchhHHHHHhhcccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCC
Confidence            0     100 1111   13557788887631    111112345799999999999999999999999999999999 87


Q ss_pred             CC-----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCc
Q 019162          168 GK-----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQ  223 (345)
Q Consensus       168 g~-----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~  223 (345)
                      |+           ..|+|+|.+ ...++++|++++.+            .++|++|+|.+++.+.++++|.||+|+++|+
T Consensus       163 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  242 (386)
T PRK14277        163 GSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQ  242 (386)
T ss_pred             CCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCc
Confidence            74           468999984 45567889887644            7789999999999999999999999999999


Q ss_pred             EEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEE
Q 019162          224 EVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR  302 (345)
Q Consensus       224 ~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~  302 (345)
                      +|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+||||+ +.|.||+++++|+++
T Consensus       243 ~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~  321 (386)
T PRK14277        243 MITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKF  321 (386)
T ss_pred             EEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEE
Confidence            99999999984 4567899999999999999999999999999999999999999999999997 899999999999999


Q ss_pred             EECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          303 KFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       303 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +|+|+|||..+.+.+|||||+|+|.||+.||++|+++|++++
T Consensus       322 ri~g~G~p~~~~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~  363 (386)
T PRK14277        322 RLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKELLREFE  363 (386)
T ss_pred             EECCCCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence            999999998765557999999999999999999999999987

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.3e-76  Score=570.19  Aligned_cols=319  Identities=34%  Similarity=0.585  Sum_probs=278.0

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~   81 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGGG   81 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCCC
Confidence            479999999999999999999999999999999998 5678999999999999999999999999999987753211111


Q ss_pred             CC-CCc--ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162          104 RG-GGM--GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---------  169 (345)
Q Consensus       104 ~~-~~~--~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---------  169 (345)
                      ++ ++|  ++++.|+|++|||++.. +.....+++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+         
T Consensus        82 ~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~  161 (376)
T PRK14280         82 FGGGDFGGGFGFEDIFSSFFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKE  161 (376)
T ss_pred             CCCCCccccccchhhHHHHhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCc
Confidence            11 111  12577999999985321 1122345799999999999999999999999999999999 8774         


Q ss_pred             --cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC
Q 019162          170 --RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK  234 (345)
Q Consensus       170 --~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~  234 (345)
                        ..|+|+|.+. ..++++|++++.+            .++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+|++.
T Consensus       162 ~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~  241 (376)
T PRK14280        162 TCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPG  241 (376)
T ss_pred             cCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCC
Confidence              4689999854 4456778876432            678999999999999999999999999999999999999995


Q ss_pred             C-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCC
Q 019162          235 I-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHF  313 (345)
Q Consensus       235 ~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~  313 (345)
                      + ++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+
T Consensus       242 ~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~  320 (376)
T PRK14280        242 VNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR  320 (376)
T ss_pred             CCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC
Confidence            4 567899999999999999999999999999999999999999999999996 89999999999999999999999865


Q ss_pred             CCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          314 SNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       314 ~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +..+|||||+|+|.||+.||++|+++|++++
T Consensus       321 ~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~  351 (376)
T PRK14280        321 GYGQGDQYVVVRVVTPTKLTDRQKELLREFA  351 (376)
T ss_pred             CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            5557999999999999999999999999987

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-75  Score=568.81  Aligned_cols=318  Identities=31%  Similarity=0.562  Sum_probs=278.9

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC--
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG--  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~--  101 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+||++++..+.++  
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~-~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~   81 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGA   81 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCC
Confidence            479999999999999999999999999999999998 57789999999999999999999999999999877532111  


Q ss_pred             CC---CC--CCcccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----
Q 019162          102 GG---RG--GGMGVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----  169 (345)
Q Consensus       102 ~~---~~--~~~~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----  169 (345)
                      ++   ++  .++ .++.|+|++|||++.. +.....+++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+     
T Consensus        82 ~~~~~~~~~~~~-~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~  160 (380)
T PRK14276         82 GGFGGFDGSGGF-GGFEDIFSSFFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPG  160 (380)
T ss_pred             CCCCCccccccc-cchhhHHHHHhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCC
Confidence            01   11  112 2577999999985321 1123346799999999999999999999999999999999 8774     


Q ss_pred             ------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeec
Q 019162          170 ------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYED  230 (345)
Q Consensus       170 ------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~  230 (345)
                            +.|+|+|.+ ...++++|++++.+            .++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+
T Consensus       161 ~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~  240 (380)
T PRK14276        161 TSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQ  240 (380)
T ss_pred             CCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEecc
Confidence                  468999985 44567788887643            67899999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCc
Q 019162          231 GEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGM  309 (345)
Q Consensus       231 G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~  309 (345)
                      |++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|++++|+|+||+ +.|+||+++++|++++|+|+||
T Consensus       241 G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~  319 (380)
T PRK14276        241 GEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGA  319 (380)
T ss_pred             ccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCc
Confidence            99964 466799999999999999999999999999999999999999999999997 8999999999999999999999


Q ss_pred             CCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          310 PLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       310 p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      |..+.+.+|||||+|+|.||+.||++|+++|++++
T Consensus       320 p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~  354 (380)
T PRK14276        320 PKLRGGGNGDQHVTVNIVTPTKLNDAQKEALKAFA  354 (380)
T ss_pred             CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            98765557999999999999999999999999987

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.7e-75  Score=565.93  Aligned_cols=320  Identities=33%  Similarity=0.602  Sum_probs=278.4

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C-
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G-  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~-  101 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+ + 
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~   82 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS   82 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence            47999999999999999999999999999999999877889999999999999999999999999999987753211 0 


Q ss_pred             CCCCCCcc----cChhhhhhhhcCCCC--C-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----
Q 019162          102 GGRGGGMG----VNIQDIFSSFFGGGP--M-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----  169 (345)
Q Consensus       102 ~~~~~~~~----~~~~d~F~~~fg~~~--~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----  169 (345)
                      ++++ ++.    .++.|+|++|||++.  . +.....+++.|+++.|+|||||+|+|+++++.+++.+.|+ |.|+    
T Consensus        83 ~~~~-~~~~~~~~~~~d~f~~~fgg~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~  161 (380)
T PRK14297         83 GGFG-GFDFSDMGGFGDIFDSFFGGGFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKP  161 (380)
T ss_pred             CCCC-CcCcccccchhHHHHHHhccCccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccC
Confidence            1111 111    146799999998531  1 1122345799999999999999999999999999999999 8774    


Q ss_pred             -------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEee
Q 019162          170 -------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYE  229 (345)
Q Consensus       170 -------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g  229 (345)
                             +.|+|+|.+ ..++.++|++++..            .++|..|+|.|++.+.++++|.||||+++|++|+|+|
T Consensus       162 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g  241 (380)
T PRK14297        162 GTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRG  241 (380)
T ss_pred             CCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEec
Confidence                   468999985 44566778776432            6789999999999999999999999999999999999


Q ss_pred             cCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCC
Q 019162          230 DGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEG  308 (345)
Q Consensus       230 ~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G  308 (345)
                      +|++.+ ++.+|||+|+|++++|+.|+|+|+||++++.|||+||++|+++.|+|+||+ +.|.||+++++|++++|+|+|
T Consensus       242 ~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G  320 (380)
T PRK14297        242 QGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKG  320 (380)
T ss_pred             CccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCC
Confidence            999854 567899999999999999999999999999999999999999999999996 899999999999999999999


Q ss_pred             cCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          309 MPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       309 ~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ||..+...+|||||+|+|.||+.||++|+++|+++|.
T Consensus       321 ~p~~~~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  357 (380)
T PRK14297        321 VPRVNSTGRGNQYVTVIVDIPKKLNSKQKEALTMFME  357 (380)
T ss_pred             cCCCCCCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence            9976655579999999999999999999999999873

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-74  Score=561.35  Aligned_cols=322  Identities=31%  Similarity=0.551  Sum_probs=277.7

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~  102 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||++|+||.+|+.||+||++++.....+.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            57999999999999999999999999999999999854 67899999999999999999999999999987764211110


Q ss_pred             CCCCC-cc---cCh-----hhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-
Q 019162          103 GRGGG-MG---VNI-----QDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-  169 (345)
Q Consensus       103 ~~~~~-~~---~~~-----~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-  169 (345)
                      +.+++ ++   .++     .|+|++|||++..  +.....++++|+++.++|||+|+|+|+++++.+++.+.|+ |.|+ 
T Consensus        83 ~~~g~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G  162 (369)
T PRK14282         83 ESGGGFFEDIFKDFENIFNRDIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTG  162 (369)
T ss_pred             CCCCcccccccccccccccchhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccC
Confidence            00111 11   011     3789999985211  1122346799999999999999999999999999999999 8774 


Q ss_pred             ----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEE
Q 019162          170 ----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVV  226 (345)
Q Consensus       170 ----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~  226 (345)
                                +.|+|+|.+ ..+++++|++++.+            .++|++|+|.+++.+.++++|.||||+++|++|+
T Consensus       163 ~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~  242 (369)
T PRK14282        163 VEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLR  242 (369)
T ss_pred             CCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEE
Confidence                      468999985 45567888887643            6779999999999999999999999999999999


Q ss_pred             EeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEEC
Q 019162          227 FYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFG  305 (345)
Q Consensus       227 ~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~  305 (345)
                      |+|+|++. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+.+.|+||+++++|++++|+
T Consensus       243 ~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~  322 (369)
T PRK14282        243 ITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLK  322 (369)
T ss_pred             EecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEEC
Confidence            99999985 46778999999999999999999999999999999999999999999999988999999999999999999


Q ss_pred             CCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          306 GEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       306 g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      |+|||..+...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       323 GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~  362 (369)
T PRK14282        323 GKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKELAK  362 (369)
T ss_pred             CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            9999975444579999999999999999999999999873

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.3e-74  Score=563.35  Aligned_cols=319  Identities=34%  Similarity=0.597  Sum_probs=275.0

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC-C
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG-G  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~-~  102 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++...... +
T Consensus         2 ~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~~   81 (397)
T PRK14281          2 KRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGG   81 (397)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccCC
Confidence            479999999999999999999999999999999998778899999999999999999999999999999877532111 1


Q ss_pred             --CCCCCcccChhhhh---hhhcCCCC--------------CCC-c----cccccCCceeeeeehhheeeeccceEEEEE
Q 019162          103 --GRGGGMGVNIQDIF---SSFFGGGP--------------MEE-D----EKIVKGDDVIVELDATLEDLYMGGSLKVWR  158 (345)
Q Consensus       103 --~~~~~~~~~~~d~F---~~~fg~~~--------------~~~-~----~~~~kg~di~~~l~itlee~~~G~~~~v~~  158 (345)
                        +++++ +.++.|+|   ++|||++.              ... .    ....++.|+++.|+|||||+|+|+++++.+
T Consensus        82 ~~~~~~~-~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~  160 (397)
T PRK14281         82 GPGYGGG-GGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKI  160 (397)
T ss_pred             CCCCCcC-CCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEE
Confidence              11111 12455665   47887421              000 0    112468999999999999999999999999


Q ss_pred             EeeeeeC-CCCC----------cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEE
Q 019162          159 EKNVIKP-APGK----------RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVD  214 (345)
Q Consensus       159 ~r~~~c~-c~g~----------~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~  214 (345)
                      ++.+.|+ |.|+          +.|+|+|.+. ..++++|++++.+            .++|+.|+|.+++.+.++++|.
T Consensus       161 ~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~  240 (397)
T PRK14281        161 KKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVT  240 (397)
T ss_pred             EeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEEe
Confidence            9999999 8774          4689999854 4456677776532            7789999999999999999999


Q ss_pred             ecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162          215 IEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK  293 (345)
Q Consensus       215 Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~  293 (345)
                      ||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||+ +.|+||
T Consensus       241 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip  319 (397)
T PRK14281        241 VPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTIP  319 (397)
T ss_pred             cCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEeC
Confidence            999999999999999999965 568999999999999999999999999999999999999999999999996 899999


Q ss_pred             CcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          294 GITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       294 ~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +++++|++++|+|+|||..+...+|||||+|+|.||+.||++|+++|++++
T Consensus       320 ~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~  370 (397)
T PRK14281        320 AGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVSHQDKELLKELK  370 (397)
T ss_pred             CccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCCHHHHHHHHHHH
Confidence            999999999999999997665557999999999999999999999999987

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2e-74  Score=562.58  Aligned_cols=320  Identities=28%  Similarity=0.466  Sum_probs=269.3

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC--
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA--  100 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--  100 (345)
                      +.+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+|||||++|+.||+||+.+...+..  
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~   86 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR   86 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence            358999999999999999999999999999999999878889999999999999999999999999999743211100  


Q ss_pred             ----CCCCCC---C---ccc---------------ChhhhhhhhcCCCC-CCCccccccCCceeeeeehhheeeeccceE
Q 019162          101 ----GGGRGG---G---MGV---------------NIQDIFSSFFGGGP-MEEDEKIVKGDDVIVELDATLEDLYMGGSL  154 (345)
Q Consensus       101 ----~~~~~~---~---~~~---------------~~~d~F~~~fg~~~-~~~~~~~~kg~di~~~l~itlee~~~G~~~  154 (345)
                          ++++++   +   .+.               ++.|+|++||+++. .....+.++++|+++.|+|||+|+|+|+++
T Consensus        87 ~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~~  166 (392)
T PRK14279         87 RFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVTM  166 (392)
T ss_pred             cccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeEE
Confidence                000000   0   001               23467777786432 111233467999999999999999999999


Q ss_pred             EEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEE----------EeecccccccCceEEEecEEEE
Q 019162          155 KVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQ----------MTEQVCDQCQNVKYEREGYFVT  212 (345)
Q Consensus       155 ~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~----------~~~~~C~~C~G~g~~~~~~~~~  212 (345)
                      ++.+++.+.|+ |.|+           +.|+|+|.+...+ ++..+++          ...++|+.|+|.+++.+.++++
T Consensus       167 ~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~  245 (392)
T PRK14279        167 PLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQ-GAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTIN  245 (392)
T ss_pred             EEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEe-cceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeE
Confidence            99999999999 8775           4688999865544 2211111          2378899999999999999999


Q ss_pred             EEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEE
Q 019162          213 VDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIS  291 (345)
Q Consensus       213 V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~  291 (345)
                      |.||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ +.|+
T Consensus       246 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~  324 (392)
T PRK14279        246 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVK  324 (392)
T ss_pred             EEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEE
Confidence            99999999999999999999965 466799999999999999999999999999999999999999999999996 8999


Q ss_pred             eCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          292 TKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       292 i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ||+++++|++++|+|+|||... ..+|||||+|+|.||++|+++|+++|++++.
T Consensus       325 Ip~g~~~g~~iri~g~G~p~~~-~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~  377 (392)
T PRK14279        325 VPAGTADGRILRVRGRGVPKRS-GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE  377 (392)
T ss_pred             ECCCCCCCCEEEECCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999999999999643 3479999999999999999999999999873

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.4e-74  Score=558.03  Aligned_cols=317  Identities=34%  Similarity=0.565  Sum_probs=274.4

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||+||+||.+|+.||+||+++++.+.++++
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~~~g   82 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGGFGG   82 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCCCCC
Confidence            57999999999999999999999999999999999877889999999999999999999999999999987753211111


Q ss_pred             CCC--CcccChhhhhhhhcCCCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC---------
Q 019162          104 RGG--GMGVNIQDIFSSFFGGGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK---------  169 (345)
Q Consensus       104 ~~~--~~~~~~~d~F~~~fg~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~---------  169 (345)
                      +.+  .+..++.|+|++|||.+..  ....+..++.|+.+.|.|||||+|+|+++++.+++.+.|+ |.|+         
T Consensus        83 ~~~~~~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~  162 (373)
T PRK14301         83 FSSAEDIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPE  162 (373)
T ss_pred             cccccccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCc
Confidence            111  0011456889999873211  1123346799999999999999999999999999999999 8774         


Q ss_pred             --cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162          170 --RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI  235 (345)
Q Consensus       170 --~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~  235 (345)
                        +.|+|+|.+...+   |++++.            ..++|+.|+|.|++.+.++++|.||+|+++|++|+|+|+|++.+
T Consensus       163 ~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~  239 (373)
T PRK14301        163 TCRHCGGSGQVRQSQ---GFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGV  239 (373)
T ss_pred             ccCCccCeeEEEEEe---eeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCC
Confidence              4688988865433   444432            27789999999999999999999999999999999999999854


Q ss_pred             -CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCC
Q 019162          236 -DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS  314 (345)
Q Consensus       236 -~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~  314 (345)
                       ++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|++++|+|+||+ +.|.||+++++|++++|+|+|||..+.
T Consensus       240 ~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~~  318 (373)
T PRK14301        240 HGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLGS  318 (373)
T ss_pred             CCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCCC
Confidence             677899999999999999999999999999999999999999999999997 999999999999999999999998765


Q ss_pred             CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          315 NKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       315 ~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      ..+|||||+|+|.||+.|+++|+++|++++
T Consensus       319 ~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~  348 (373)
T PRK14301        319 SQKGDLLVEVSVVTPTKLTKRQEELLREFE  348 (373)
T ss_pred             CCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            557999999999999999999999999986

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-74  Score=560.58  Aligned_cols=317  Identities=31%  Similarity=0.517  Sum_probs=271.9

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC---C
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA---G  101 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~---~  101 (345)
                      .|||+||||+++||.+|||+|||+||++||||+|++++.|+++|++|++||++|+|+.+|+.||+||++++..+.+   +
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~   80 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG   80 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence            4899999999999999999999999999999999977889999999999999999999999999999876532211   1


Q ss_pred             CCCCC----------Ccc---cChhhhhhhhcCCCC---C--CCccccccCCceeeeeehhheeeeccceEEEEEEeeee
Q 019162          102 GGRGG----------GMG---VNIQDIFSSFFGGGP---M--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVI  163 (345)
Q Consensus       102 ~~~~~----------~~~---~~~~d~F~~~fg~~~---~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~  163 (345)
                      +++++          .|+   ..+.|+|++||++..   .  .......++.|+.+.|.|||||+|+|+++++.+++.+.
T Consensus        81 ~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~  160 (391)
T PRK14284         81 AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKS  160 (391)
T ss_pred             CCcCcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeecc
Confidence            11100          011   012588999997521   1  11123457899999999999999999999999999999


Q ss_pred             eC-CCCC-----------cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCC
Q 019162          164 KP-APGK-----------RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGM  219 (345)
Q Consensus       164 c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~  219 (345)
                      |+ |.|+           +.|+|+|.+...+   |++++.            ..++|+.|+|.+++.+.++++|.||||+
T Consensus       161 C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~  237 (391)
T PRK14284        161 CDACSGSGANSSQGIKVCDRCKGSGQVVQSR---GFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGV  237 (391)
T ss_pred             CCCCcccccCCCCCCeecCccCCeeEEEEEe---ceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCC
Confidence            99 8765           4688888865444   444322            2778999999999999999999999999


Q ss_pred             CCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCC-CcEEEEEeCCcCC
Q 019162          220 QDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLD-EHLVDISTKGITK  297 (345)
Q Consensus       220 ~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ld-g~~i~v~i~~~~~  297 (345)
                      ++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.||++|++++|+|+| |..+.|+||++++
T Consensus       238 ~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~  317 (391)
T PRK14284        238 DSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQ  317 (391)
T ss_pred             CCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccC
Confidence            9999999999999965 5778999999999999999999999999999999999999999999999 5679999999999


Q ss_pred             CCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          298 PKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       298 ~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +|++++|+|+|||..++..+|||||+|+|.+|+.|+++|+++|++++
T Consensus       318 ~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~  364 (391)
T PRK14284        318 SGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLRQFA  364 (391)
T ss_pred             CCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            99999999999998765557999999999999999999999999987

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.8e-74  Score=558.31  Aligned_cols=318  Identities=32%  Similarity=0.560  Sum_probs=272.1

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccc----cCccccccC
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDT----YGEEGLKQH   98 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~~   98 (345)
                      +.+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+    ||++++..+
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~   86 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG   86 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence            4689999999999999999999999999999999998777899999999999999999999999999    998876521


Q ss_pred             cC-C--CCC--------C--------CCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEE
Q 019162           99 AA-G--GGR--------G--------GGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWRE  159 (345)
Q Consensus        99 ~~-~--~~~--------~--------~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~  159 (345)
                      .+ +  +++        +        ++++..+.|+|++||+++.  ...+.+++.|+++.|.|||||+|+|++++|.++
T Consensus        87 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~--~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~  164 (389)
T PRK14295         87 PGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNRGG--RRTQPRRGADVESEVTLSFTEAIDGATVPLRLT  164 (389)
T ss_pred             CCCCCCCCCCcccccccccccccccccccccchhhhhcccccCCC--CCCCCCCCCCEEEEEEEEHHHHhCCceEEEEee
Confidence            11 0  000        0        0011124577777776431  122346799999999999999999999999999


Q ss_pred             eeeeeC-CCCC-----------cCCCccceEEEEEecCceEEE-----------EeecccccccCceEEEecEEEEEEec
Q 019162          160 KNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQ-----------MTEQVCDQCQNVKYEREGYFVTVDIE  216 (345)
Q Consensus       160 r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~-----------~~~~~C~~C~G~g~~~~~~~~~V~Ip  216 (345)
                      +.+.|+ |.|+           +.|+|+|.+...+ | +|.++           ...++|+.|+|.+++.+.++++|.||
T Consensus       165 r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~-g-~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip  242 (389)
T PRK14295        165 SQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNS-G-GFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIP  242 (389)
T ss_pred             ccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEe-c-ceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeC
Confidence            999999 8774           4688998865554 2 22222           12788999999999999999999999


Q ss_pred             CCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc
Q 019162          217 KGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI  295 (345)
Q Consensus       217 ~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~  295 (345)
                      +|+++|++|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|++++|+|+||+.+.|.||++
T Consensus       243 ~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g  322 (389)
T PRK14295        243 AGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPG  322 (389)
T ss_pred             CCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCc
Confidence            999999999999999985 4677899999999999999999999999999999999999999999999998899999999


Q ss_pred             CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          296 TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       296 ~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      +++|++++|+|+|||..+ ..+|||||+|+|.||+.||++|+++|+++++
T Consensus       323 ~~~g~~iri~G~G~p~~~-~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~  371 (389)
T PRK14295        323 TPNGRVLRVRGKGAVRKD-GTRGDLLVTVEVAVPKDLSGKAREALEAFRE  371 (389)
T ss_pred             cCCCcEEEECCCCcCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999999999743 3479999999999999999999999999863

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.2e-74  Score=555.83  Aligned_cols=318  Identities=35%  Similarity=0.589  Sum_probs=274.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+.++++
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~   82 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGGG   82 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCCC
Confidence            57999999999999999999999999999999999877889999999999999999999999999999887653221111


Q ss_pred             CCC--CcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162          104 RGG--GMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------  169 (345)
Q Consensus       104 ~~~--~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------  169 (345)
                      +++  +++..+.++|++|||++......+.+++.|+++.|+|||||+|+|+++++.+++.+.|+ |.|+           
T Consensus        83 ~~~~~~~~~~f~~~f~~~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C  162 (371)
T PRK10767         83 FGGGGGFGDIFGDIFGDIFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTC  162 (371)
T ss_pred             CCCccccccchhhhhhhhccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccC
Confidence            111  22212568888888753211123356899999999999999999999999999999999 8774           


Q ss_pred             cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCC-CCC
Q 019162          170 RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEP-KID  236 (345)
Q Consensus       170 ~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~  236 (345)
                      +.|+|+|.+...+   |++++.            ..++|+.|+|.|++.+.++++|.||||+++|++|+|+|+|++ .++
T Consensus       163 ~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~  239 (371)
T PRK10767        163 PTCHGAGQVRMQQ---GFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERG  239 (371)
T ss_pred             CCCCCeeEEEEee---ceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCC
Confidence            4688888765444   444322            267899999999999999999999999999999999999998 456


Q ss_pred             CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCC
Q 019162          237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNK  316 (345)
Q Consensus       237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~  316 (345)
                      +.+|||+|+|+++||+.|+|+|+||++++.|||++|++|+++.|+|+|| .+.|.||+++++|++++|+|+|||..++..
T Consensus       240 ~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~  318 (371)
T PRK10767        240 GPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVRSGA  318 (371)
T ss_pred             CCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCCCCC
Confidence            7899999999999999999999999999999999999999999999999 589999999999999999999999866555


Q ss_pred             CCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          317 KGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       317 ~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      +|||||+|+|.||+.|+.+|+++|+++++
T Consensus       319 ~GDL~v~~~v~~P~~l~~~~~~ll~~l~~  347 (371)
T PRK10767        319 RGDLYCQVVVETPVNLTKRQKELLEEFEE  347 (371)
T ss_pred             CCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            79999999999999999999999999873

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-73  Score=551.71  Aligned_cols=317  Identities=34%  Similarity=0.599  Sum_probs=274.5

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG  102 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~  102 (345)
                      ..+|||+||||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||++++..+..+ 
T Consensus         2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~-   80 (366)
T PRK14294          2 VKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS-   80 (366)
T ss_pred             CCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC-
Confidence            3579999999999999999999999999999999998778899999999999999999999999999999877532111 


Q ss_pred             CCCCCcc---cChhhhhhhhcC-CCCC--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162          103 GRGGGMG---VNIQDIFSSFFG-GGPM--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------  169 (345)
Q Consensus       103 ~~~~~~~---~~~~d~F~~~fg-~~~~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------  169 (345)
                      ++ +++.   .++.|+|++||| ++..  +......+++|+++.|.|||||+|+|+++++.+++.+.|+ |.|+      
T Consensus        81 ~~-~~~~~~~~~~~d~f~~~fg~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  159 (366)
T PRK14294         81 GF-SGFDDIFSSFGDIFEDFFGFGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGT  159 (366)
T ss_pred             Cc-CccccchhhhhhhHHHhhccCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCC
Confidence            11 1111   246789999998 3211  1112346799999999999999999999999999999999 8774      


Q ss_pred             -----cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162          170 -----RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE  232 (345)
Q Consensus       170 -----~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~  232 (345)
                           +.|+|+|.+....   |++++.            ..++|+.|+|.+++.+.++++|.||||+++|++|+|+|+|+
T Consensus       160 ~~~~C~~C~G~G~~~~~~---G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~  236 (366)
T PRK14294        160 SPTTCPQCGGSGQVTQSQ---GFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGE  236 (366)
T ss_pred             CcccCCCcCCeEEEEEEe---eeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCcc
Confidence                 4688888765432   444322            27789999999999999999999999999999999999999


Q ss_pred             CC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162          233 PK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL  311 (345)
Q Consensus       233 ~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~  311 (345)
                      +. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|++++|+|+||+ +.|.||+++++|++++|+|+|||.
T Consensus       237 ~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~  315 (366)
T PRK14294        237 AGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPS  315 (366)
T ss_pred             CCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCC
Confidence            85 5678999999999999999999999999999999999999999999999996 699999999999999999999997


Q ss_pred             CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      .+...+|||||+|+|.+|+.|+.+|+++|+++++
T Consensus       316 ~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~  349 (366)
T PRK14294        316 LRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR  349 (366)
T ss_pred             CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            7655579999999999999999999999999873

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.6e-72  Score=542.29  Aligned_cols=318  Identities=32%  Similarity=0.512  Sum_probs=273.8

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~  102 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|++++ +|+++|++|++||++|+|+.+|+.||+||+.++..+.++.
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~~   81 (365)
T PRK14290          2 AKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSNF   81 (365)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCCc
Confidence            379999999999999999999999999999999998664 7899999999999999999999999999998764211100


Q ss_pred             CCCC--CcccChhhhhhhhcCCCC------C--CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC--
Q 019162          103 GRGG--GMGVNIQDIFSSFFGGGP------M--EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--  169 (345)
Q Consensus       103 ~~~~--~~~~~~~d~F~~~fg~~~------~--~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--  169 (345)
                      ++++  ++ .++.|+|++|||++.      .  ...+..+++.|+++.|.|||+|+|+|+++++.+++.+.|+ |.|+  
T Consensus        82 ~~~~~~~~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~  160 (365)
T PRK14290         82 NWDNFTHF-SDINDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGA  160 (365)
T ss_pred             cccccccc-cchhHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccC
Confidence            0000  12 267899999998521      0  0111123488999999999999999999999999999998 8774  


Q ss_pred             --------cCCCccceEEEEEecCceEEEE--------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEE
Q 019162          170 --------RRCNCRNEVYHKQIGPGMFQQM--------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF  227 (345)
Q Consensus       170 --------~~C~G~G~~~~~~~~~g~~~~~--------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~  227 (345)
                              +.|+|+|.+...+ ++|++.+.              ..++|++|+|.+++.+.++++|.||||+.+|++|+|
T Consensus       161 ~~~~~~~C~~C~G~G~~~~~~-~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  239 (365)
T PRK14290        161 KNGKLITCPTCHGTGQQRIVR-GQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV  239 (365)
T ss_pred             CCCCCccCCCCCCcCEEEEEe-ccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence                    4689999854444 46665331              278899999999999999999999999999999999


Q ss_pred             eecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCC
Q 019162          228 YEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGE  307 (345)
Q Consensus       228 ~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~  307 (345)
                      +|+|++ +++.+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|++|+ ++|.||+++++|++++|+|+
T Consensus       240 ~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~  317 (365)
T PRK14290        240 KGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGA  317 (365)
T ss_pred             ccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCC
Confidence            999996 6888999999999999999999999999999999999999999999999995 99999999999999999999


Q ss_pred             CcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          308 GMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       308 G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      |||..+...+|||||+|+|.+|+.|+++|+++|+++|.
T Consensus       318 G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~  355 (365)
T PRK14290        318 GMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREFFD  355 (365)
T ss_pred             CCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            99976655579999999999999999999999999873

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-72  Score=544.74  Aligned_cols=317  Identities=29%  Similarity=0.539  Sum_probs=269.1

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCc--CC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AG  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--~~  101 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+|+.+|+.||+||++++....  ++
T Consensus         2 ~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~   80 (372)
T PRK14300          2 SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTD-AKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG   80 (372)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCC
Confidence            379999999999999999999999999999999997 566889999999999999999999999999998765321  11


Q ss_pred             CCCCCCcccChh----hhhhhhcCCCCCCCc-cccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162          102 GGRGGGMGVNIQ----DIFSSFFGGGPMEED-EKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------  169 (345)
Q Consensus       102 ~~~~~~~~~~~~----d~F~~~fg~~~~~~~-~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------  169 (345)
                      ++..++++.++.    ++|+.|||++..... ..+.++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+      
T Consensus        81 ~g~~~~~~~~~~~~f~~~f~~~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~  160 (372)
T PRK14300         81 GGNHGGFHPDINDIFGDFFSDFMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGE  160 (372)
T ss_pred             CCCCCccccchhhhHHHHHHhhcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCC
Confidence            110012211233    445544443211111 1235789999999999999999999999999999999 8774      


Q ss_pred             -----cCCCccceEEEEEecCceEEEE------------eecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCC
Q 019162          170 -----RRCNCRNEVYHKQIGPGMFQQM------------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGE  232 (345)
Q Consensus       170 -----~~C~G~G~~~~~~~~~g~~~~~------------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~  232 (345)
                           +.|+|+|.+...   .|++++.            ..++|++|+|.|++.+.++++|.||+|+++|++|+|+|+|+
T Consensus       161 ~~~~C~~C~G~G~~~~~---~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~  237 (372)
T PRK14300        161 TVTTCDACSGVGATRMQ---QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE  237 (372)
T ss_pred             CCccCCCccCeEEEEEe---eceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecccc
Confidence                 468899986543   2455422            27889999999999999999999999999999999999999


Q ss_pred             CC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCC
Q 019162          233 PK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL  311 (345)
Q Consensus       233 ~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~  311 (345)
                      +. +++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+.++|.||+++++|++++|+|+|||.
T Consensus       238 ~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~  317 (372)
T PRK14300        238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSK  317 (372)
T ss_pred             CCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCC
Confidence            85 56789999999999999999999999999999999999999999999999988999999999999999999999997


Q ss_pred             CCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          312 HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       312 ~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      .+...+|||||+|+|.||++||++|+++|++++
T Consensus       318 ~~~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~  350 (372)
T PRK14300        318 MRSTIRGDMLTHIHVEVPKNLSKRQRELLEEFK  350 (372)
T ss_pred             CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            655557999999999999999999999999987

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.7e-72  Score=544.35  Aligned_cols=317  Identities=33%  Similarity=0.572  Sum_probs=269.7

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG-  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~-  102 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++||||.+|+.||+||+.++....... 
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~   80 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK-NPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ   80 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence            479999999999999999999999999999999998 477889999999999999999999999999988764321110 


Q ss_pred             ---CCCCCcccChhhhhhhhc---C-C---CC--C--CC---ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC
Q 019162          103 ---GRGGGMGVNIQDIFSSFF---G-G---GP--M--EE---DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP  165 (345)
Q Consensus       103 ---~~~~~~~~~~~d~F~~~f---g-~---~~--~--~~---~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~  165 (345)
                         ++++..+.++.|+|++||   + +   +.  .  ..   ..+..+++|+.+.|.|||+|+|+|+++++.+++.+.|+
T Consensus        81 ~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~  160 (382)
T PRK14291         81 GQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCE  160 (382)
T ss_pred             cccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCC
Confidence               111101125678887773   2 1   00  0  00   12234789999999999999999999999999999999


Q ss_pred             -CCCC-----------cCCCccceEEEEEecCceEEEE-----------eecccccccCceEEEecEEEEEEecCCCCCC
Q 019162          166 -APGK-----------RRCNCRNEVYHKQIGPGMFQQM-----------TEQVCDQCQNVKYEREGYFVTVDIEKGMQDG  222 (345)
Q Consensus       166 -c~g~-----------~~C~G~G~~~~~~~~~g~~~~~-----------~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G  222 (345)
                       |.|+           +.|+|+|.+....   |++++.           ..++|++|+|.|++.+.++++|.||||+++|
T Consensus       161 ~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G  237 (382)
T PRK14291        161 ACGGTGYDPGSGEKVCPTCGGSGEIYQRG---GFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNG  237 (382)
T ss_pred             CCccccCCCCCCCccCCCCCCceEEEEec---ceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCC
Confidence             8774           4688888754442   333321           2678999999999999999999999999999


Q ss_pred             cEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcE
Q 019162          223 QEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV  301 (345)
Q Consensus       223 ~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~  301 (345)
                      ++|+|+|+|++. .++.+|||+|+|+++||+.|+|+|+||++++.|||.||++|+++.|+|+||+.++|.||+++++|++
T Consensus       238 ~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~  317 (382)
T PRK14291        238 SKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDK  317 (382)
T ss_pred             CEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCE
Confidence            999999999995 4788999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             EEECCCCcCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHh
Q 019162          302 RKFGGEGMPLHFSNKKGDLYITFEVLFPT--TLT------EDQKTRIKEVL  344 (345)
Q Consensus       302 ~ri~g~G~p~~~~~~~GDL~v~~~v~~P~--~l~------~~q~~~l~~~l  344 (345)
                      ++|+|+|||..+...+|||||+|+|.||+  .||      ++|+++|+++.
T Consensus       318 i~i~G~G~p~~~~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~  368 (382)
T PRK14291        318 IRVPGKGMPRLKGSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELD  368 (382)
T ss_pred             EEECCCCCCCCCCCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHH
Confidence            99999999987655579999999999998  599      99999999885

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=4.8e-72  Score=541.12  Aligned_cols=317  Identities=36%  Similarity=0.594  Sum_probs=277.7

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC--CCC
Q 019162           26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA--GGG  103 (345)
Q Consensus        26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--~~~  103 (345)
                      |||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+|+.+|+.||+||++++..+..  +++
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~   79 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGG   79 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCC
Confidence            7999999999999999999999999999999998 6678899999999999999999999999999987653211  111


Q ss_pred             CCC----CcccChhhhhhhhcCCCCC---CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162          104 RGG----GMGVNIQDIFSSFFGGGPM---EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------  169 (345)
Q Consensus       104 ~~~----~~~~~~~d~F~~~fg~~~~---~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------  169 (345)
                      +.+    ++ .++.|+|++|||++..   ......++++|+++.|+|||||+|+|+++++.+++.+.|+ |.|+      
T Consensus        80 ~~~~~~~~~-~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~  158 (354)
T TIGR02349        80 FNGFDIGFF-GDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGT  158 (354)
T ss_pred             cCCccccCc-CchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCC
Confidence            110    12 1567999999985321   1123346799999999999999999999999999999999 8774      


Q ss_pred             -----cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecC
Q 019162          170 -----RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG  231 (345)
Q Consensus       170 -----~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G  231 (345)
                           ..|+|+|.+ ....+++|++++.+            .++|+.|+|.+++.+.+.++|.||+|+++|++|+|+|+|
T Consensus       159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G  238 (354)
T TIGR02349       159 DPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKG  238 (354)
T ss_pred             CCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCc
Confidence                 468999984 44567899887643            677999999999999999999999999999999999999


Q ss_pred             CCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcC
Q 019162          232 EPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP  310 (345)
Q Consensus       232 ~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p  310 (345)
                      ++. .++.+|||+|+|++++|+.|+|+|+||++++.|||+||++|+++.|+|+|| .+.|.+|+++++|++++|+|+|||
T Consensus       239 ~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p  317 (354)
T TIGR02349       239 NAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVP  317 (354)
T ss_pred             cCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcC
Confidence            984 467789999999999999999999999999999999999999999999999 699999999999999999999999


Q ss_pred             CCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          311 LHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       311 ~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ..+.+.+|||||+|+|.||+.|+.+|+++|+++|+
T Consensus       318 ~~~~~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~  352 (354)
T TIGR02349       318 RLRGNGRGDLLVTVKVETPKNLSKEQKELLEELAE  352 (354)
T ss_pred             CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            77655579999999999999999999999999984

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=9.6e-72  Score=542.39  Aligned_cols=318  Identities=34%  Similarity=0.573  Sum_probs=274.5

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG  101 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~  101 (345)
                      +..+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|++||+||+++++.....
T Consensus         2 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~   80 (378)
T PRK14283          2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSE-EEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE   80 (378)
T ss_pred             CCcCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccc
Confidence            34689999999999999999999999999999999998 57899999999999999999999999999998876421110


Q ss_pred             C-----CCC---CCcccChhhhhhhh-cCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC--
Q 019162          102 G-----GRG---GGMGVNIQDIFSSF-FGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK--  169 (345)
Q Consensus       102 ~-----~~~---~~~~~~~~d~F~~~-fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~--  169 (345)
                      +     .+.   ++++.++.++|+.| |+++.   ....+++.|+++++.|||+|+|+|+++++.+++.+.|+ |.|+  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~---~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~  157 (378)
T PRK14283         81 DIFNNINFEDIFQGFGFGIGNIFDMFGFGGGS---RHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRA  157 (378)
T ss_pred             ccccccCccccccccccchhhhccccccCCCC---CCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCcccc
Confidence            0     000   11111345677776 65421   12245789999999999999999999999999999998 8774  


Q ss_pred             ---------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEE
Q 019162          170 ---------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVF  227 (345)
Q Consensus       170 ---------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~  227 (345)
                               +.|+|+|.+ ..++.++|++++..            .++|..|+|.|++.+.++++|.||||+++|++|+|
T Consensus       158 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l  237 (378)
T PRK14283        158 EPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRV  237 (378)
T ss_pred             CCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEE
Confidence                     468899985 44566777775432            67899999999999999999999999999999999


Q ss_pred             eecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECC
Q 019162          228 YEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGG  306 (345)
Q Consensus       228 ~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g  306 (345)
                      +|+|++. .++.+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+|| .+.|.||+++++|+++||+|
T Consensus       238 ~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g  316 (378)
T PRK14283        238 SGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKG  316 (378)
T ss_pred             eccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECC
Confidence            9999984 457899999999999999999999999999999999999999999999999 68999999999999999999


Q ss_pred             CCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          307 EGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       307 ~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +|||..+...+|||||+|+|.||+.|+++|+++|++++
T Consensus       317 ~G~p~~~~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~  354 (378)
T PRK14283        317 HGMPSLRWSGKGNLYVKVKVVVPKKLSPKQKELLREFA  354 (378)
T ss_pred             CCCCCCCCCCCCCEEEEEEEEeCCCCCHHHHHHHHHHH
Confidence            99997665557999999999999999999999999987

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.3e-71  Score=537.84  Aligned_cols=321  Identities=31%  Similarity=0.553  Sum_probs=274.2

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG  102 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~  102 (345)
                      ..+|||++|||+++||.+|||+|||+||++||||+|+++++|+++|++|++||++|+||.+|+.||+||+++++.+.+++
T Consensus         3 ~~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14289          3 EKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG   82 (386)
T ss_pred             ccCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence            35899999999999999999999999999999999997888999999999999999999999999999998765321111


Q ss_pred             CCCCCcccChhhhhhhh---cCC---CC-----CC---CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CC
Q 019162          103 GRGGGMGVNIQDIFSSF---FGG---GP-----ME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-AP  167 (345)
Q Consensus       103 ~~~~~~~~~~~d~F~~~---fg~---~~-----~~---~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~  167 (345)
                      ++++ .+.++.++|++|   |++   +.     +.   ......++.|+++.+.|||||+|+|+++++.+++.+.|+ |.
T Consensus        83 ~~~~-~~~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  161 (386)
T PRK14289         83 GFSG-EGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH  161 (386)
T ss_pred             CCCC-CCcChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence            1111 112444554433   542   10     00   112245789999999999999999999999999999998 87


Q ss_pred             CC-----------cCCCccceE-EEEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCc
Q 019162          168 GK-----------RRCNCRNEV-YHKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQ  223 (345)
Q Consensus       168 g~-----------~~C~G~G~~-~~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~  223 (345)
                      |+           +.|+|+|.+ ...++++|++++..            .++|+.|+|.|++.+.++++|.||+|+++|+
T Consensus       162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  241 (386)
T PRK14289        162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM  241 (386)
T ss_pred             CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCC
Confidence            64           468999985 44567778875432            6789999999999999999999999999999


Q ss_pred             EEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEE
Q 019162          224 EVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVR  302 (345)
Q Consensus       224 ~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~  302 (345)
                      +|+|+|+|++. .++.+|||+|+|++++|+.|+|+++||++++.|||.+|++|+++.|+|+||+ +.|.||+++++|+++
T Consensus       242 ~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~  320 (386)
T PRK14289        242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVL  320 (386)
T ss_pred             EEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEE
Confidence            99999999985 4678999999999999999999999999999999999999999999999996 899999999999999


Q ss_pred             EECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          303 KFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       303 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ||+|+|||..++..+|||||+|+|.||+.|+++|+++|+++++
T Consensus       321 ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~  363 (386)
T PRK14289        321 RLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQTLEKMEN  363 (386)
T ss_pred             EECCCCcCCCCCCCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            9999999976655579999999999999999999999999874

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.4e-70  Score=533.46  Aligned_cols=316  Identities=31%  Similarity=0.510  Sum_probs=275.4

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCCC
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGR  104 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~  104 (345)
                      .|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||+||+++..+..+++++
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~-~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~~~   80 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPF   80 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-ChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCccc
Confidence            59999999999999999999999999999999998 67789999999999999999999999999998753211111111


Q ss_pred             CCCcccChhhhhhhhcCCCCCC---CccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------
Q 019162          105 GGGMGVNIQDIFSSFFGGGPME---EDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------  169 (345)
Q Consensus       105 ~~~~~~~~~d~F~~~fg~~~~~---~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------  169 (345)
                       +++++++.|+|++|||++.+.   ...+..++.|+++.+.|||+|+|+|+++++.+++.+.|+ |.|+           
T Consensus        81 -~~~~~d~~d~f~~~fg~~~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~  159 (371)
T PRK14292         81 -GGMGFDPMDIFEQLFGGAGFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKT  159 (371)
T ss_pred             -CccCCChHHHHHHhhCCCCcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCcc
Confidence             222347789999999863211   112346799999999999999999999999999999999 8764           


Q ss_pred             -cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162          170 -RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI  235 (345)
Q Consensus       170 -~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~  235 (345)
                       ..|+|+|.+. ..+..+|++++.+            ..+|++|+|.|++.+.++++|.||+|+++|++|+|+|+|++.+
T Consensus       160 C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~  239 (371)
T PRK14292        160 CPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGP  239 (371)
T ss_pred             CCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCC
Confidence             3688999854 4455678876433            7789999999999999999999999999999999999999977


Q ss_pred             CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC
Q 019162          236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN  315 (345)
Q Consensus       236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~  315 (345)
                      ++. |||+|+|++++|+.|+|+|+||++++.|||.||++|+++.|+|+||+ +.|.||+++++|++++|+|+|||..++.
T Consensus       240 ~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~~~  317 (371)
T PRK14292        240 GGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQGA  317 (371)
T ss_pred             CCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCCCC
Confidence            666 99999999999999999999999999999999999999999999997 4899999999999999999999986655


Q ss_pred             CCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       316 ~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      .+|||||+|+|.||+.|+++|+++|++++
T Consensus       318 ~~GDL~V~~~v~~P~~l~~~q~~ll~~~~  346 (371)
T PRK14292        318 GTGDLIVEYEIAVPKQLSPEAREALEAYA  346 (371)
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999986

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.3e-70  Score=530.12  Aligned_cols=318  Identities=31%  Similarity=0.553  Sum_probs=274.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||.||++++..+.+.++
T Consensus         2 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~~~   80 (374)
T PRK14293          2 AADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGFPD   80 (374)
T ss_pred             CCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCcCC
Confidence            479999999999999999999999999999999998 5678899999999999999999999999999887652111001


Q ss_pred             CCCCcccChhhhhhhhcCC-CC-C-----CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC------
Q 019162          104 RGGGMGVNIQDIFSSFFGG-GP-M-----EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK------  169 (345)
Q Consensus       104 ~~~~~~~~~~d~F~~~fg~-~~-~-----~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~------  169 (345)
                      . ++++ ++.|+|++||++ +. .     .......++.|+++.+.|||||+|+|+++++.+++.+.|+ |.|+      
T Consensus        81 ~-~~~~-~~~d~f~~~fg~~~~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~  158 (374)
T PRK14293         81 M-GDMG-GFADIFETFFSGFGGAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGT  158 (374)
T ss_pred             c-cccc-chHHHHHHHhcccCCCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCC
Confidence            0 1121 456899999963 11 0     0112345789999999999999999999999999999999 8764      


Q ss_pred             -----cCCCccceEE-EEEecCceEEEEe------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecC
Q 019162          170 -----RRCNCRNEVY-HKQIGPGMFQQMT------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG  231 (345)
Q Consensus       170 -----~~C~G~G~~~-~~~~~~g~~~~~~------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G  231 (345)
                           +.|+|+|.+. ..++++|++++..            +++|++|+|.+++.+.++++|.||||+++|++|+|+|+|
T Consensus       159 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G  238 (374)
T PRK14293        159 GPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEG  238 (374)
T ss_pred             CCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCc
Confidence                 4689999854 4457788887533            678999999999999999999999999999999999999


Q ss_pred             CCC-CCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcC
Q 019162          232 EPK-IDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP  310 (345)
Q Consensus       232 ~~~-~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p  310 (345)
                      ++. .+..+|||+|+|++++|+.|+|+|+||+++++|||.||++|+++.|+|+||+ ++|.||+++++|++++|+|+|||
T Consensus       239 ~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p  317 (374)
T PRK14293        239 DAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVP  317 (374)
T ss_pred             cCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCC
Confidence            985 4567899999999999999999999999999999999999999999999996 89999999999999999999999


Q ss_pred             CCCCC-CCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          311 LHFSN-KKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       311 ~~~~~-~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      ..+.. .+|||||+|+|.||+.|+++|+++|+++|+
T Consensus       318 ~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~  353 (374)
T PRK14293        318 RLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK  353 (374)
T ss_pred             CCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            76543 469999999999999999999999999873

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2.9e-70  Score=510.88  Aligned_cols=307  Identities=43%  Similarity=0.757  Sum_probs=276.6

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG  102 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~  102 (345)
                      ....||+||||+++||.+|||+|||+||++||||+|++   |.++|++|++||||||||++|++||+||+++++.+.++ 
T Consensus         2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~---~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~-   77 (337)
T KOG0712|consen    2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD---AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG-   77 (337)
T ss_pred             cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc---HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC-
Confidence            35689999999999999999999999999999999995   67999999999999999999999999999998543322 


Q ss_pred             CCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------cC
Q 019162          103 GRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RR  171 (345)
Q Consensus       103 ~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~~  171 (345)
                         ++++ .    |++||+.+... .+...+++|+.+.++|||||+|+|.++++.++++.+|+ |+|.          ..
T Consensus        78 ---~g~~-~----f~~~F~~g~~~-~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~  148 (337)
T KOG0712|consen   78 ---GGFG-G----FSQFFGFGGNG-GRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTT  148 (337)
T ss_pred             ---CCCc-c----HHHhccCCCcC-ccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCC
Confidence               2222 2    77777744322 23334499999999999999999999999999999999 8764          47


Q ss_pred             CCccce-EEEEEecCceEEEEe---------------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC
Q 019162          172 CNCRNE-VYHKQIGPGMFQQMT---------------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI  235 (345)
Q Consensus       172 C~G~G~-~~~~~~~~g~~~~~~---------------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~  235 (345)
                      |+|+|. +..++.+||++|+++               ++.|+.|.|.+++.+.+.++|.|++|++++++|++.|++++.+
T Consensus       149 C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~  228 (337)
T KOG0712|consen  149 CRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAP  228 (337)
T ss_pred             CCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecC
Confidence            889998 677889999998765               7799999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC--CcCCCCcEEEECCCCcCCCC
Q 019162          236 DGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPLHF  313 (345)
Q Consensus       236 ~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~--~~~~~g~~~ri~g~G~p~~~  313 (345)
                      +..+||++|.|..++|+.|.|.|+||++..+|++.||++|+.+.+.|+||+.+.+.++  .++++|.+++|.|+|||+.+
T Consensus       229 g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~  308 (337)
T KOG0712|consen  229 GTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFR  308 (337)
T ss_pred             CCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCccccc
Confidence            9999999999999999999999999999999999999999999999999999998865  58899999999999999988


Q ss_pred             CCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          314 SNKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       314 ~~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      .+ .|||||+|.|+||+ +++++...|+.+|
T Consensus       309 ~~-~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  309 NP-KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             CC-CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            76 89999999999999 9999999999886

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.2e-63  Score=466.87  Aligned_cols=266  Identities=37%  Similarity=0.592  Sum_probs=230.4

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC--
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG--  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~--  101 (345)
                      .+|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||++|+||.+|+.||+||++++..+..+  
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~   81 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPP   81 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCC
Confidence            579999999999999999999999999999999998 67789999999999999999999999999998754321110  


Q ss_pred             -CCCC-CCc----ccChhhhhhhhcCC-CCCCC--------ccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCC
Q 019162          102 -GGRG-GGM----GVNIQDIFSSFFGG-GPMEE--------DEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPA  166 (345)
Q Consensus       102 -~~~~-~~~----~~~~~d~F~~~fg~-~~~~~--------~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c  166 (345)
                       ++.+ +++    ..+++|+|++|||+ ++...        ....+++.|+++.+.|||+|+|.|+++++.+        
T Consensus        82 ~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l--------  153 (291)
T PRK14299         82 PGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEV--------  153 (291)
T ss_pred             CCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEee--------
Confidence             0000 111    12678999999985 21110        1234679999999999999999999999865        


Q ss_pred             CCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEE
Q 019162          167 PGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRI  246 (345)
Q Consensus       167 ~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i  246 (345)
                                                              ..++++|+||||+++|++|+++|+|++.     |||+|+|
T Consensus       154 ----------------------------------------~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i  188 (291)
T PRK14299        154 ----------------------------------------AGERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVV  188 (291)
T ss_pred             ----------------------------------------CCEEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEE
Confidence                                                    2357899999999999999999999863     9999999


Q ss_pred             EEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEE
Q 019162          247 RTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV  326 (345)
Q Consensus       247 ~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v  326 (345)
                      ++++|+.|+|+|+||+++++||+.+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|||... +.+|||||+|+|
T Consensus       189 ~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~~-~~~GDL~v~~~V  266 (291)
T PRK14299        189 RLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRGP-AGRGDQYAEVRI  266 (291)
T ss_pred             EEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCEEEEEEE
Confidence            9999999999999999999999999999999999999996 89999999999999999999999643 347999999999


Q ss_pred             ECCCCCCHHHHHHHHHHhC
Q 019162          327 LFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       327 ~~P~~l~~~q~~~l~~~l~  345 (345)
                      .+|+.|+++|+++|+++++
T Consensus       267 ~~P~~l~~~~~~~l~~l~~  285 (291)
T PRK14299        267 TIPTRPTPEEERLYKQLAE  285 (291)
T ss_pred             ECCCCCCHHHHHHHHHHHh
Confidence            9999999999999999863

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=2.8e-61  Score=456.92  Aligned_cols=283  Identities=27%  Similarity=0.441  Sum_probs=237.0

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc----cccCc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG----LKQHA   99 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~----~~~~~   99 (345)
                      .+|||++|||+++||.+|||+|||+||++||||+++ +++|+++|++|++||++|+||.+|+.||+||+..    +....
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~-~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~   81 (306)
T PRK10266          3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQF   81 (306)
T ss_pred             cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccc
Confidence            479999999999999999999999999999999987 5678999999999999999999999999998642    21100


Q ss_pred             CCCCCCCCc-ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccce
Q 019162          100 AGGGRGGGM-GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNE  177 (345)
Q Consensus       100 ~~~~~~~~~-~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~  177 (345)
                      +. +.+..+ ..++.++|+.|||++.. ......+++.|+.+++.|||+|+|+|+++++.+++.+         |+|.|.
T Consensus        82 ~~-~~~~~~~~~~~~~~f~~~~g~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~---------~~g~G~  151 (306)
T PRK10266         82 QH-GDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPV---------YNAFGM  151 (306)
T ss_pred             cc-CCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEeccc---------ccCCCe
Confidence            00 001111 12678999999985221 1122345789999999999999999999999887643         222221


Q ss_pred             EEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCccc
Q 019162          178 VYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRR  256 (345)
Q Consensus       178 ~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r  256 (345)
                      +          +               ....++++|.||+|+++|++|+++|+|++.. +..+|||+|+|+++||+.|+|
T Consensus       152 ~----------~---------------~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r  206 (306)
T PRK10266        152 I----------E---------------QEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDI  206 (306)
T ss_pred             E----------E---------------EeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEE
Confidence            1          0               1124689999999999999999999999854 567899999999999999999


Q ss_pred             ccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHH
Q 019162          257 EGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQ  336 (345)
Q Consensus       257 ~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q  336 (345)
                      +|+||++++.||+.+|++|+++.|+|++|+ +.|++|+++++|++++|+|+|||..+  .+|||||+|+|.+|+.|+++|
T Consensus       207 ~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~--~~GdL~v~~~v~~P~~l~~~q  283 (306)
T PRK10266        207 VGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK--QTGDLYAVLKIVMPPKPDEKT  283 (306)
T ss_pred             eCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC--CCCCEEEEEEEECCCCCCHHH
Confidence            999999999999999999999999999996 89999999999999999999999753  479999999999999999999


Q ss_pred             HHHHHHHhC
Q 019162          337 KTRIKEVLG  345 (345)
Q Consensus       337 ~~~l~~~l~  345 (345)
                      +++|+++++
T Consensus       284 ~~l~~~l~~  292 (306)
T PRK10266        284 AALWQQLAD  292 (306)
T ss_pred             HHHHHHHHh
Confidence            999999863

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.5e-52  Score=387.12  Aligned_cols=312  Identities=54%  Similarity=0.897  Sum_probs=276.5

Q ss_pred             hhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccC
Q 019162           19 LNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQH   98 (345)
Q Consensus        19 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   98 (345)
                      ......+|||++|||+++||.+|||+|||+||++||||+||++|.|.+.|++|+.||||||||++|+.||+||++++...
T Consensus        10 ~~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~   89 (336)
T KOG0713|consen   10 EAVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDE   89 (336)
T ss_pred             hhhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccc
Confidence            34455789999999999999999999999999999999999999999999999999999999999999999999998743


Q ss_pred             cCCCCCCCCcccChhhhhhhhcCCC-----CCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCC
Q 019162           99 AAGGGRGGGMGVNIQDIFSSFFGGG-----PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCN  173 (345)
Q Consensus        99 ~~~~~~~~~~~~~~~d~F~~~fg~~-----~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~  173 (345)
                      .-. +.+++.|   .++|+.||+.-     +........+|.++...++.+++++|.|...+...++.+.|+|+|+..|+
T Consensus        90 ~~~-~~~g~~~---~~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~  165 (336)
T KOG0713|consen   90 NKD-GEGGGGG---NDIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCN  165 (336)
T ss_pred             ccc-cccCCcc---cchHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccC
Confidence            211 1111111   46666666521     11123347789999999999999999999999999999999999999999


Q ss_pred             ccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCC
Q 019162          174 CRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDR  253 (345)
Q Consensus       174 G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~  253 (345)
                      ++-.+..++.++|.+++.+...|..|.+.+...+....++.+..|...|....+..+|.+...+.+||+.+.+..-+|+.
T Consensus       166 ~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~  245 (336)
T KOG0713|consen  166 CRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPR  245 (336)
T ss_pred             ChhhheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccc
Confidence            99999999999999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             cccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCC-C
Q 019162          254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPT-T  331 (345)
Q Consensus       254 f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~-~  331 (345)
                      |.|.++|+++++.+++.+++.|+..++.++|+..+.+....++.++..++.+++|||....+ ..|.+|++|.+.+|. .
T Consensus       246 ~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~  325 (336)
T KOG0713|consen  246 FERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSS  325 (336)
T ss_pred             eecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccc
Confidence            99999999999999999999999999999999888888888999999999999999966543 349999999999996 4


Q ss_pred             CCH
Q 019162          332 LTE  334 (345)
Q Consensus       332 l~~  334 (345)
                      ++.
T Consensus       326 ~~~  328 (336)
T KOG0713|consen  326 LSD  328 (336)
T ss_pred             cch
Confidence            565

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=3e-44  Score=360.03  Aligned_cols=159  Identities=15%  Similarity=0.154  Sum_probs=142.9

Q ss_pred             CceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162          135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD  214 (345)
Q Consensus       135 ~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~  214 (345)
                      -++.+.+.|||+++|+||++++.+.|.+.|.                                  .|...+.+.++++|+
T Consensus       657 ~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g----------------------------------~G~ktvkE~ktLeVk  702 (871)
T TIGR03835       657 VNLVYEEEVPQILFFNNQIKEIKYTRHTVDG----------------------------------NTESTTNEAITLEIQ  702 (871)
T ss_pred             cceEEecccCHHHHhCCCeEEEEEEEeeccC----------------------------------CCcceeeeeEEEEEe
Confidence            4788999999999999999999998887642                                  133445677899999


Q ss_pred             ecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCC
Q 019162          215 IEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKG  294 (345)
Q Consensus       215 Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~  294 (345)
                      ||+|+++|++|+|+|+|+..+++. |||+|+|+++||+.|+|+|+||++++.|+|.+||+|+++.|+||||+ +.|.||+
T Consensus       703 IPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPp  780 (871)
T TIGR03835       703 LPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPG  780 (871)
T ss_pred             cCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCC
Confidence            999999999999999999876664 99999999999999999999999999999999999999999999997 8999999


Q ss_pred             cCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEE-CCC
Q 019162          295 ITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL-FPT  330 (345)
Q Consensus       295 ~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~-~P~  330 (345)
                      ++++|+++||+|+|||..+ +.+|||||+|.|. +++
T Consensus       781 gTqpGqvLRIkGKGMP~~~-~~RGDLyV~f~V~~~~k  816 (871)
T TIGR03835       781 GIKVNDQVIFKDLGLTKTK-YDKGSLIVHLYYSSVMK  816 (871)
T ss_pred             CCCCCcEEEECCCCCCCCC-CCCCCEEEEEEEeeccc
Confidence            9999999999999999543 3479999999997 454

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=7.7e-37  Score=285.76  Aligned_cols=232  Identities=32%  Similarity=0.511  Sum_probs=191.1

Q ss_pred             hhhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           18 ALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        18 ~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      +.......|||+||||+++|+..|||+||++||++||||.|. +.+|.++|++|.+|||+|+|+++|+.||.+|..+.  
T Consensus        36 ~s~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~-~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~--  112 (288)
T KOG0715|consen   36 ASRIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNK-DKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH--  112 (288)
T ss_pred             ecccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCC-CcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc--
Confidence            333444459999999999999999999999999999999998 45899999999999999999999999999987641  


Q ss_pred             CcCCCCCCCCcccChhhhhhhhcCCCCCCCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-------
Q 019162           98 HAAGGGRGGGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-------  169 (345)
Q Consensus        98 ~~~~~~~~~~~~~~~~d~F~~~fg~~~~~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-------  169 (345)
                              ++++.++.++|..+|+++    ..+...+.+.++.+.++|++|..|+.+.+.++....|. |.+.       
T Consensus       113 --------~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~  180 (288)
T KOG0715|consen  113 --------GEFGGNPFDVFLEFFGGK----MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAK  180 (288)
T ss_pred             --------ccccCCccchHHHhhccc----ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccc
Confidence                    011127889999999761    22334567888999999999999999999999999998 7664       


Q ss_pred             ----cCCCccceEEEEEe-cCceE--------EEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCC
Q 019162          170 ----RRCNCRNEVYHKQI-GPGMF--------QQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID  236 (345)
Q Consensus       170 ----~~C~G~G~~~~~~~-~~g~~--------~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~  236 (345)
                          ..|.|.|....... .+.+.        .....+.|..|.|.+.+...+.+.|.+|+|+.++.+|++.+.|+.   
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~---  257 (288)
T KOG0715|consen  181 RESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND---  257 (288)
T ss_pred             cccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc---
Confidence                46888885333221 11111        122255599999999999999999999999999999999998874   


Q ss_pred             CCCceEEEEEEEcCCCCcccccCCeeEEEEecHHH
Q 019162          237 GEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQ  271 (345)
Q Consensus       237 ~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~e  271 (345)
                          ||+|.+.|.+++.|+|+|.|+++++.|++.+
T Consensus       258 ----~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  258 ----DLFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             ----eEEEEEEeccCcccccccCcccccccccccC
Confidence                9999999999999999999999999998754

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=1.3e-24  Score=203.69  Aligned_cols=254  Identities=37%  Similarity=0.612  Sum_probs=196.1

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccccccCcC-C
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA-G  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~  101 (345)
                      ..|||++|+|.++|+.++|++||+++|++||||+|+.. ..|..+|++|++||++|+|+.+|..||+||++++.+... .
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~~   81 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSFS   81 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCCC
Confidence            57999999999999999999999999999999999855 245568999999999999999999999999966654111 1


Q ss_pred             CCCCCC----cccChhhhhhhhcCCC-CCC-----------------------------C-----------ccccccCCc
Q 019162          102 GGRGGG----MGVNIQDIFSSFFGGG-PME-----------------------------E-----------DEKIVKGDD  136 (345)
Q Consensus       102 ~~~~~~----~~~~~~d~F~~~fg~~-~~~-----------------------------~-----------~~~~~kg~d  136 (345)
                      .....+    .-.++.+.|..|||.. +..                             .           .....+...
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (306)
T KOG0714|consen   82 SSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSPP  161 (306)
T ss_pred             CCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCCC
Confidence            111111    0124456677777621 000                             0           001122233


Q ss_pred             eeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEec
Q 019162          137 VIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIE  216 (345)
Q Consensus       137 i~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip  216 (345)
                      +...+.+++++.+.|+.+...+.+...-..                              ...    .........+.++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~----~~~~~~~~~~~~~  207 (306)
T KOG0714|consen  162 VEHPLRVSLEDLYKGESKKMKISRQSFTSN------------------------------GRE----GSSRSRYLSISIK  207 (306)
T ss_pred             ccCCcceeHHHhccccceeeecccccccCC------------------------------ccc----ccCccceeEEecc
Confidence            444555578888888877777754432210                              000    1346778899999


Q ss_pred             CCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEE--EEecHHHHhcCcEEEEEcCCCcEEEEEeC-
Q 019162          217 KGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTT--VTVTLVQALVGFEKTIEHLDEHLVDISTK-  293 (345)
Q Consensus       217 ~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~--~~Isl~eAl~G~~~~i~~ldg~~i~v~i~-  293 (345)
                      +++..|+.+....+|+..++..|-++++.+..++|+.|.+.+.||...  ..|++.+|++|....++++++..+.+.+. 
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T KOG0714|consen  208 PGWKEGTKITFPEEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINK  287 (306)
T ss_pred             CCcccccceeccccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccc
Confidence            999999999999999988888899999999999999999999999999  99999999999999999999988777777 


Q ss_pred             CcCCCCcEEEECCCCcCC
Q 019162          294 GITKPKEVRKFGGEGMPL  311 (345)
Q Consensus       294 ~~~~~g~~~ri~g~G~p~  311 (345)
                      ..+.++...+++++|+|.
T Consensus       288 ~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  288 DLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             cccCCCceeeecCCCCCC
Confidence            888999999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.87  E-value=5.7e-22  Score=151.80  Aligned_cols=80  Identities=35%  Similarity=0.543  Sum_probs=69.4

Q ss_pred             CeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCCCCCHHHHH
Q 019162          260 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKT  338 (345)
Q Consensus       260 DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~~l~~~q~~  338 (345)
                      ||+++++||++||++|++++|+|+||+.+.|++|+++++|++++|+|+|||...++ .+|||||+|+|.||++||++|++
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            89999999999999999999999999999999999999999999999999987665 67999999999999999999987


Q ss_pred             H
Q 019162          339 R  339 (345)
Q Consensus       339 ~  339 (345)
                      +
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            5

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=2.1e-19  Score=161.18  Aligned_cols=192  Identities=31%  Similarity=0.448  Sum_probs=132.3

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHH-HHHHHHHHHHHHHHhccccccccccccC-ccccccCc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE-ANKRFAEINNAYEVLSDSETRNIYDTYG-EEGLKQHA   99 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~-a~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~   99 (345)
                      ....+||+||||+++|+..||++|||++|++||||+++.++. |.+.|+.|++||++|+|+.+|..||+++ ........
T Consensus         3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~   82 (237)
T COG2214           3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKS   82 (237)
T ss_pred             hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCcccc
Confidence            456799999999999999999999999999999999997775 9999999999999999999999999973 32221110


Q ss_pred             CCCCCC-CCcc-cChhhhhhhhcCCCCC----------------C------------CccccccCC-ceeeeeehhheee
Q 019162          100 AGGGRG-GGMG-VNIQDIFSSFFGGGPM----------------E------------EDEKIVKGD-DVIVELDATLEDL  148 (345)
Q Consensus       100 ~~~~~~-~~~~-~~~~d~F~~~fg~~~~----------------~------------~~~~~~kg~-di~~~l~itlee~  148 (345)
                      ...... .... ..+.+++..+++....                .            ......... +....+.+++.++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (237)
T COG2214          83 YRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEA  162 (237)
T ss_pred             ccccccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccccceeeeeeccHHHH
Confidence            000000 0000 1344444444432100                0            000000000 3444455555555


Q ss_pred             eccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEe
Q 019162          149 YMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY  228 (345)
Q Consensus       149 ~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~  228 (345)
                      +.+....+...                                               ......+.+|.|+..+..+++.
T Consensus       163 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  195 (237)
T COG2214         163 LAGVKKAVARL-----------------------------------------------LGKALKSTIKAGALEGKALRLK  195 (237)
T ss_pred             hcCcceeeecc-----------------------------------------------ccccccccCCcccccCceeeec
Confidence            55544444321                                               1223338999999999999999


Q ss_pred             ecCCCCCCCCCceEEEEEEEcCCCCcccccCCe
Q 019162          229 EDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNL  261 (345)
Q Consensus       229 g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL  261 (345)
                      +++.... +..++.+..+..++|+.|...++++
T Consensus       196 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  227 (237)
T COG2214         196 GLLKSAR-GALGKARLKELSKRHPPFALEGDDK  227 (237)
T ss_pred             ccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence            9998766 8889999999999999999999999

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=1.1e-20  Score=170.36  Aligned_cols=73  Identities=59%  Similarity=0.990  Sum_probs=69.9

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      ..|+|++|||+++|+.++||||||+|+++||||+++++|++.++|++||+||+||+||.+|..||.||+.++.
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            4579999999999999999999999999999999998899999999999999999999999999999998775

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=5.9e-20  Score=170.93  Aligned_cols=90  Identities=44%  Similarity=0.786  Sum_probs=79.2

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCCC
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG  103 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~  103 (345)
                      ..|||++|||+.+||.+||++|||+.|++||||+||+||.|.++|+.+.+||+||+|+..|..||++|..+....     
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~-----   78 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ-----   78 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch-----
Confidence            679999999999999999999999999999999999999999999999999999999999999999987654321     


Q ss_pred             CCCCcccChhhhhhhhcCC
Q 019162          104 RGGGMGVNIQDIFSSFFGG  122 (345)
Q Consensus       104 ~~~~~~~~~~d~F~~~fg~  122 (345)
                         ++ .+..++|...|++
T Consensus        79 ---~~-~d~~~~~r~~f~~   93 (296)
T KOG0691|consen   79 ---GR-EDQADGFRKKFGS   93 (296)
T ss_pred             ---hh-hhHHHHHHHHhhh
Confidence               11 1667777777764

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.78  E-value=1.8e-19  Score=185.86  Aligned_cols=75  Identities=36%  Similarity=0.686  Sum_probs=69.3

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      +...++||++|||+++||..+||+|||+||++||||+++++ .|.++|++|++||+|||||.+|+.||+||..++.
T Consensus       569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~-~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~  643 (1136)
T PTZ00341        569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN-EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK  643 (1136)
T ss_pred             cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccC
Confidence            34568999999999999999999999999999999999854 6889999999999999999999999999988764

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=3.4e-19  Score=170.48  Aligned_cols=77  Identities=52%  Similarity=0.813  Sum_probs=70.1

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      +.+.+.||++|||.++|+..+||++||+||++||||+||+. .+|.++|+.|+.||+|||||+.|++||.+-++-|.+
T Consensus         4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~   81 (508)
T KOG0717|consen    4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRG   81 (508)
T ss_pred             chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcC
Confidence            45678999999999999999999999999999999999855 579999999999999999999999999987766643

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=5.5e-19  Score=169.06  Aligned_cols=74  Identities=49%  Similarity=0.894  Sum_probs=68.6

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      ...|||.+|+|+++||.+||++|||++++.||||+..+.   ..|++.|+.|.+||||||||.+|++||.||++|++
T Consensus         7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            356999999999999999999999999999999998632   34899999999999999999999999999999997

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.73  E-value=2e-18  Score=125.96  Aligned_cols=63  Identities=60%  Similarity=1.016  Sum_probs=59.6

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHHHHHHHHhcccccccccc
Q 019162           26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSETRNIYD   88 (345)
Q Consensus        26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd   88 (345)
                      |||+||||+++++.++||+||+++++++|||+++.+. .+.+.|+.|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987554 68899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.72  E-value=5.3e-18  Score=157.75  Aligned_cols=77  Identities=47%  Similarity=0.744  Sum_probs=68.4

Q ss_pred             hhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162           19 LNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE---EANKRFAEINNAYEVLSDSETRNIYDTYGEEGL   95 (345)
Q Consensus        19 ~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   95 (345)
                      ......+|||+||||.++|+..||.||||++|.+||||-..+..   .|+++|-.|..|-|||+||++|++||. |++.+
T Consensus       388 kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPL  466 (504)
T KOG0624|consen  388 KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPL  466 (504)
T ss_pred             HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCC
Confidence            34566799999999999999999999999999999999988443   389999999999999999999999996 66655


Q ss_pred             c
Q 019162           96 K   96 (345)
Q Consensus        96 ~   96 (345)
                      +
T Consensus       467 D  467 (504)
T KOG0624|consen  467 D  467 (504)
T ss_pred             C
Confidence            4

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=5.4e-18  Score=149.44  Aligned_cols=72  Identities=47%  Similarity=0.821  Sum_probs=66.0

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CcHHHHHHHHHHHHHHHHhccccccccccccCcc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ--GNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE   93 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~--~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   93 (345)
                      ...+|+|+||||.++|+..+|++||++||++||||+++  ...+|.++|+.++.||.||+|.++|+.||..|.-
T Consensus        11 f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i   84 (264)
T KOG0719|consen   11 FNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI   84 (264)
T ss_pred             ccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence            34569999999999999999999999999999999994  3467999999999999999999999999998864

>PHA03102 Small T antigen; Reviewed

Probab=99.70  E-value=1.6e-17  Score=140.64  Aligned_cols=86  Identities=22%  Similarity=0.364  Sum_probs=72.8

Q ss_pred             CcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCC
Q 019162           24 GKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAG  101 (345)
Q Consensus        24 ~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~  101 (345)
                      .+.+|++|||+++|  |.++||+|||++|+++|||+++ +   .++|++|++||++|+|+.+|..||.+|++.....   
T Consensus         4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg-~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~---   76 (153)
T PHA03102          4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG-D---EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE---   76 (153)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc-h---hHHHHHHHHHHHHHhhHHHhccccccCCcccccc---
Confidence            35689999999999  9999999999999999999986 3   3799999999999999999999999997654211   


Q ss_pred             CCCCCCcccChhhhhhhhcCCC
Q 019162          102 GGRGGGMGVNIQDIFSSFFGGG  123 (345)
Q Consensus       102 ~~~~~~~~~~~~d~F~~~fg~~  123 (345)
                          .   ..+.++|..+||+.
T Consensus        77 ----~---~~~~~~f~~~fg~~   91 (153)
T PHA03102         77 ----E---DVPSGYVGATFGDR   91 (153)
T ss_pred             ----c---ccHHHHhhhhcCCc
Confidence                0   13678888888764

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.66  E-value=1.6e-16  Score=114.22  Aligned_cols=59  Identities=69%  Similarity=1.095  Sum_probs=54.7

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cHHHHHHHHHHHHHHHHhccccc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG-NEEANKRFAEINNAYEVLSDSET   83 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-~~~a~~~f~~i~~Ay~~L~d~~~   83 (345)
                      +|||++|||+++++.++||+||+++++++|||++++ .+.+.+.|++|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999986 56788999999999999999853

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.65  E-value=2.6e-16  Score=137.69  Aligned_cols=71  Identities=39%  Similarity=0.740  Sum_probs=64.9

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      ..|+|+||||+++||.+|||+|||+|+++||||++++-.+.++.|..|++||+.|+|+..|..|..||...
T Consensus        98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD  168 (230)
T KOG0721|consen   98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD  168 (230)
T ss_pred             cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence            45999999999999999999999999999999999843556788999999999999999999999999753

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.63  E-value=5.3e-16  Score=109.48  Aligned_cols=55  Identities=69%  Similarity=1.113  Sum_probs=51.8

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162           26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD   80 (345)
Q Consensus        26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d   80 (345)
                      |||++|||+++++.++||++|++|+++||||++++...+.+.|++|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6999999999999999999999999999999998546788999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.58  E-value=1.2e-15  Score=136.06  Aligned_cols=67  Identities=45%  Similarity=0.760  Sum_probs=62.7

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      ...+|.|++|||+++|+.+||.+|||+||++||||+++ ++++.+.|..|..|||+|.|.+.|..||-
T Consensus        30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r-~~e~k~~F~~iAtayeilkd~e~rt~ydy   96 (329)
T KOG0722|consen   30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNR-DPESKKLFVKIATAYEILKDNETRTQYDY   96 (329)
T ss_pred             ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccC-CchhhhhhhhhhcccccccchhhHHhHHH
Confidence            44589999999999999999999999999999999998 56677999999999999999999999995

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.51  E-value=1.1e-14  Score=138.43  Aligned_cols=97  Identities=44%  Similarity=0.766  Sum_probs=79.1

Q ss_pred             HHhhhccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           16 CYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        16 ~~~~~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      -..+..++.+|||.|||++++||..|||+|||++|+.||||++.++ .+++.+|++|-+||.+|+||.+|..||.- .. 
T Consensus       364 ~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg-~d-  441 (486)
T KOG0550|consen  364 QLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSG-QD-  441 (486)
T ss_pred             HHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccc-cc-
Confidence            3455677789999999999999999999999999999999999877 78999999999999999999999999962 11 


Q ss_pred             cccCcCCCCCCCCcccChhhhhhhh
Q 019162           95 LKQHAAGGGRGGGMGVNIQDIFSSF  119 (345)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~d~F~~~  119 (345)
                      +..  .+   +++.+++|.++|..|
T Consensus       442 le~--~~---~~~a~~dp~~~~~a~  461 (486)
T KOG0550|consen  442 LEE--VG---SGGAGFDPFNIFRAF  461 (486)
T ss_pred             hhh--hc---CCCcCcChhhhhhhc
Confidence            111  11   112345888888877

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.48  E-value=4.7e-14  Score=122.75  Aligned_cols=65  Identities=26%  Similarity=0.461  Sum_probs=57.7

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccc
Q 019162           25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      .|||++|||++.  ++..+|+++||++++++|||+..+.+     .|.+.|+.||+||++|+||.+|+.|+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            489999999995  68899999999999999999976442     256789999999999999999999984

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.46  E-value=6.8e-14  Score=121.04  Aligned_cols=65  Identities=31%  Similarity=0.538  Sum_probs=57.3

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH---HHHHHHHHHHHHHHhccccccccccc
Q 019162           25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      .|||++|||++.  ++..+|+++||++++++|||++.+..+   +.+.+..||+||++|+||.+|+.|+.
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            589999999996  789999999999999999999874322   34568899999999999999999974

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.43  E-value=1.6e-13  Score=119.33  Aligned_cols=67  Identities=27%  Similarity=0.408  Sum_probs=59.8

Q ss_pred             CCcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162           23 AGKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        23 ~~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      ...|||++|||++.  .+..+|+++||+|++++|||++.+.++     +.+.|+.||+||++|+||.+|+.|+.
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            46899999999996  578999999999999999999865432     56789999999999999999999984

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.43  E-value=1.6e-13  Score=119.79  Aligned_cols=66  Identities=23%  Similarity=0.400  Sum_probs=57.8

Q ss_pred             CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162           24 GKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        24 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      ..|||++|||++.  ++..+|+++||+|++++|||+++..++     +.+.++.||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4799999999995  689999999999999999999875544     34456899999999999999999984

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.35  E-value=5.2e-13  Score=128.44  Aligned_cols=66  Identities=38%  Similarity=0.571  Sum_probs=63.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      .+|.|.+|||++++|.++|||.||++|+..|||+|. .+.|++.|+.++.|||+|+|+++|+.||.-
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~-~~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNM-IPRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccC-ChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            689999999999999999999999999999999998 888999999999999999999999999963

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.35  E-value=1e-12  Score=105.89  Aligned_cols=52  Identities=29%  Similarity=0.481  Sum_probs=47.3

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLS   79 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~   79 (345)
                      ..++|+||||+++||.+|||++||+|++++|||+++ ++   +.|++|++||++|.
T Consensus        64 ~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG-s~---~~~~kIneAyevL~  115 (116)
T PTZ00100         64 KSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG-ST---YIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHh
Confidence            469999999999999999999999999999999964 43   67899999999995

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.28  E-value=3.9e-12  Score=118.44  Aligned_cols=58  Identities=41%  Similarity=0.584  Sum_probs=51.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--c-----HHHHHHHHHHHHHHHHhccc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG--N-----EEANKRFAEINNAYEVLSDS   81 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~--~-----~~a~~~f~~i~~Ay~~L~d~   81 (345)
                      -.|+|++|||+++||.+|||+|||+|+++||||++.+  .     +.|+++|++|++||++|+..
T Consensus       199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            3699999999999999999999999999999999742  1     35889999999999999853

>PHA02624 large T antigen; Provisional

Probab=99.23  E-value=1e-11  Score=125.11  Aligned_cols=61  Identities=23%  Similarity=0.462  Sum_probs=56.5

Q ss_pred             CCcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccc
Q 019162           23 AGKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIY   87 (345)
Q Consensus        23 ~~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~y   87 (345)
                      ..+++|++|||+++|  +.++||+|||++|++||||+++ +   .++|++|++||++|+|+.+|..|
T Consensus         9 e~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-d---eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624          9 ESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-D---EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-c---HHHHHHHHHHHHHHhcHHHhhhc
Confidence            346899999999999  9999999999999999999975 3   37999999999999999999998

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.23  E-value=9e-12  Score=119.40  Aligned_cols=73  Identities=34%  Similarity=0.651  Sum_probs=65.5

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----cHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG-----NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL   95 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   95 (345)
                      ..-|+||||||+.++|..+||++||+|++|+|||+-++     ..+-++.+.+|++||+.|+|+..|..|-.||.-..
T Consensus        96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~  173 (610)
T COG5407          96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS  173 (610)
T ss_pred             cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence            34599999999999999999999999999999999764     14578999999999999999999999999987543

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.03  E-value=3.3e-10  Score=98.56  Aligned_cols=64  Identities=22%  Similarity=0.339  Sum_probs=56.4

Q ss_pred             cccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhcccccccccc
Q 019162           25 KSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYD   88 (345)
Q Consensus        25 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd   88 (345)
                      .|||++|||++.  .+..+++++|++|.+++|||+.....     .+.+.-..||+||.+|+||.+|+.|=
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YL   72 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAI   72 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHH
Confidence            599999999995  89999999999999999999986443     24566789999999999999999985

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.97  E-value=6.9e-10  Score=108.23  Aligned_cols=87  Identities=23%  Similarity=0.315  Sum_probs=75.3

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||+||+.|+++.|..-                                               ..+.
T Consensus       272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~  304 (369)
T PRK14282        272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP-----------------------------------------------EGGT  304 (369)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCEEEEeCC-----------------------------------------------CCcE
Confidence            35699999999999999999998888541                                               3356


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTT  264 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~  264 (345)
                      ++|.||+|+++|++++|+|+|.+.. ++.+|||||++++..|+.|++++.+|+..
T Consensus       305 i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~~~~ll~~  359 (369)
T PRK14282        305 TMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLLKE  359 (369)
T ss_pred             EEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence            8999999999999999999999853 45689999999999999999999887654

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.94  E-value=9.9e-10  Score=94.37  Aligned_cols=53  Identities=28%  Similarity=0.453  Sum_probs=46.4

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccc
Q 019162           37 ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        37 as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      .+..+|+++||++++++|||+.++..     .+.+.|+.||+||++|+||.+|+.|+.
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            47789999999999999999965332     267889999999999999999999985

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.93  E-value=3.8e-09  Score=99.82  Aligned_cols=72  Identities=24%  Similarity=0.379  Sum_probs=65.2

Q ss_pred             cccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162          254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL  332 (345)
Q Consensus       254 f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l  332 (345)
                      +.|.|.|+++++.|||.||++|+++.| +++|++++|.||+++++|++++++|+|++.      |||||+|+|.-+..+
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~------GDL~v~i~v~~h~~f  196 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG------GDLYLVVRLLPHPVF  196 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC------CCEEEEEEEcCCCCe
Confidence            457899999999999999999999998 678888999999999999999999999973      999999999876654

>PRK14290 chaperone protein DnaJ; Provisional

Probab=98.88  E-value=2.3e-09  Score=104.44  Aligned_cols=87  Identities=21%  Similarity=0.307  Sum_probs=75.4

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+.|.|+++++.|||.||+.|++++|..                                                -...
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~------------------------------------------------~~g~  297 (365)
T PRK14290        266 QRINDDLYVDQKINFPQAALGGEIEIKL------------------------------------------------FREK  297 (365)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCEEEEEc------------------------------------------------CCce
Confidence            3568999999999999999999988864                                                1235


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV  265 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~  265 (345)
                      ++|.||+|+++|++++++|+|.+.++ ..+|||+|++++..|+.|++++.+|+.++
T Consensus       298 i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~V~~P~~l~~~~~~ll~~~  353 (365)
T PRK14290        298 YNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREF  353 (365)
T ss_pred             EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            89999999999999999999998544 46899999999999999999998887653

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.84  E-value=3.4e-09  Score=91.94  Aligned_cols=68  Identities=37%  Similarity=0.604  Sum_probs=60.1

Q ss_pred             hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccc
Q 019162           20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIY   87 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~y   87 (345)
                      ++.-+-|+|++|.|.++.+.++||+.||+|+...|||+|+++ +.|...|.-+..||..|-|+.-|..-
T Consensus        48 styfnLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~  116 (250)
T KOG1150|consen   48 STYFNLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC  116 (250)
T ss_pred             ccccccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence            344567899999999999999999999999999999999988 56889999999999999998755433

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.84  E-value=4.3e-09  Score=80.36  Aligned_cols=72  Identities=24%  Similarity=0.468  Sum_probs=55.4

Q ss_pred             ceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEe
Q 019162          136 DVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDI  215 (345)
Q Consensus       136 di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~I  215 (345)
                      |+.+++.|||.||+.|+++++..-                                               ..+.++|.|
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l-----------------------------------------------~g~~~~i~i   33 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTL-----------------------------------------------DGKTIKIKI   33 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-T-----------------------------------------------TS-EEEEEE
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECC-----------------------------------------------CCCEEEEec
Confidence            688999999999999999888541                                               346899999


Q ss_pred             cCCCCCCcEEEEeecCCCC-CC-CCCceEEEEEEEcCCCCc
Q 019162          216 EKGMQDGQEVVFYEDGEPK-ID-GEPGDLKFRIRTAPHDRF  254 (345)
Q Consensus       216 p~G~~~G~~i~~~g~G~~~-~~-~~~GDL~v~i~~~~h~~f  254 (345)
                      |+|+++|++++++|+|.+. .+ +..|||+|++++.-...+
T Consensus        34 p~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~l   74 (81)
T PF01556_consen   34 PPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKL   74 (81)
T ss_dssp             TST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SST
T ss_pred             cCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCC
Confidence            9999999999999999973 33 379999999999844433

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.83  E-value=4.9e-09  Score=94.88  Aligned_cols=76  Identities=33%  Similarity=0.439  Sum_probs=65.3

Q ss_pred             HHhhhccCCcccccccCCCC---CCCHHHHHHHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           16 CYALNVIAGKSYYEVLQVPR---GASDEQIKRAYRKLALKYHPDKN--QGNEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        16 ~~~~~~~~~~~~y~iLgv~~---~as~~eIk~ayr~la~~~hPd~~--~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      .+-+..+...|+|.+|||+.   .|++.+|.+|+++...+||||+.  +++....+.|+.|+.||++|+|+.+|.+||..
T Consensus        34 ~~d~k~Wk~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~  113 (379)
T COG5269          34 REDFKNWKKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN  113 (379)
T ss_pred             hhhhhhhhhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence            34455667789999999988   78999999999999999999997  23445668999999999999999999999975


Q ss_pred             C
Q 019162           91 G   91 (345)
Q Consensus        91 g   91 (345)
                      -
T Consensus       114 d  114 (379)
T COG5269         114 D  114 (379)
T ss_pred             c
Confidence            4

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.82  E-value=4.8e-09  Score=102.22  Aligned_cols=87  Identities=24%  Similarity=0.359  Sum_probs=73.4

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.++.|..-                                               .. .
T Consensus       260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG-~  291 (366)
T PRK14294        260 ERDGNDVHCKVPISFVQAALGAQIEVPTL-----------------------------------------------EG-E  291 (366)
T ss_pred             eecCCCEEEEEEeCHHHHhCCCeEEEECC-----------------------------------------------CC-c
Confidence            45699999999999999999998888631                                               12 3


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV  265 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~  265 (345)
                      ++|.||+|+++|++++|+|+|.+.++ ..+|||+|++++..|+.|.++..+|+..+
T Consensus       292 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~  347 (366)
T PRK14294        292 RELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEF  347 (366)
T ss_pred             EEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            58999999999999999999998544 46899999999999999999887766543

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.81  E-value=2.1e-08  Score=95.47  Aligned_cols=74  Identities=19%  Similarity=0.371  Sum_probs=62.8

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEE----EcCC--C-------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEE
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTI----EHLD--E-------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYI  322 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i----~~ld--g-------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v  322 (345)
                      +.|.|+++.+.|||.||+.|+..+|    ++++  |       ++++|.||+++++|++++++|+|+|..++...|||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v  194 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWL  194 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEE
Confidence            4689999999999999999996544    4444  3       4688999999999999999999999765555799999


Q ss_pred             EEEEECCC
Q 019162          323 TFEVLFPT  330 (345)
Q Consensus       323 ~~~v~~P~  330 (345)
                      +|+|. |.
T Consensus       195 ~i~v~-ph  201 (306)
T PRK10266        195 VIHIA-PH  201 (306)
T ss_pred             EEEEc-CC
Confidence            99999 64

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.80  E-value=6.4e-09  Score=101.26  Aligned_cols=85  Identities=16%  Similarity=0.333  Sum_probs=72.5

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+++.|+..++.|||.||+.|.+++|..-                                               ..+.
T Consensus       262 ~R~G~dL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~~  294 (365)
T PRK14285        262 KRNGKDLYATLPISFTQAALGKEIKIQTI-----------------------------------------------ASKK  294 (365)
T ss_pred             EEeccceEEEEecCHHHHhCCCEEEEECC-----------------------------------------------CCCE
Confidence            35689999999999999999998888641                                               3457


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCCcccccCCee
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGNNLH  262 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~f~r~g~DL~  262 (345)
                      ++|+||+|+++|++++++|+|.+.++. ..|||+|+|++..|+.|.+++..++
T Consensus       295 v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~~l  347 (365)
T PRK14285        295 IKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLL  347 (365)
T ss_pred             EEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            899999999999999999999986544 4699999999999999988776443

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.76  E-value=1.1e-08  Score=100.46  Aligned_cols=87  Identities=24%  Similarity=0.320  Sum_probs=71.8

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||+||+.|++++|..-                                              .+...
T Consensus       274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----------------------------------------------d~g~~  307 (391)
T PRK14284        274 ERRGDDLILELPIGFVDAALGMKKEIPTL----------------------------------------------LKEGT  307 (391)
T ss_pred             eeecCCEEEEEEecHHHHhCCCeEEEeec----------------------------------------------CCCcE
Confidence            45699999999999999999999888531                                              11356


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHT  263 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~  263 (345)
                      ++|+||+|+++|++++|+|+|.+.. +..+|||||+|++..++.+..+...++.
T Consensus       308 i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll~  361 (391)
T PRK14284        308 CRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSEEQKELLR  361 (391)
T ss_pred             EEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Confidence            8999999999999999999999854 3568999999999988877776654443

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.73  E-value=1.4e-08  Score=99.27  Aligned_cols=87  Identities=21%  Similarity=0.350  Sum_probs=74.0

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|++++|..-                                               .. .
T Consensus       258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG-~  289 (371)
T PRK10767        258 ERDGNDLYCEVPISFTTAALGGEIEVPTL-----------------------------------------------DG-R  289 (371)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------CC-c
Confidence            35689999999999999999998888430                                               12 5


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLHTTV  265 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~  265 (345)
                      ++|.||+|+++|++++++|+|.+.. ++..|||||+|+|..++.|.+++.+|+.++
T Consensus       290 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l  345 (371)
T PRK10767        290 VKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEF  345 (371)
T ss_pred             EEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            8999999999999999999999854 456799999999999999999988776654

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.73  E-value=1.2e-08  Score=99.68  Aligned_cols=87  Identities=21%  Similarity=0.326  Sum_probs=73.2

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|+++.|..-                                               ..+ 
T Consensus       261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dG~-  292 (377)
T PRK14298        261 ERVGDDIISEIPISFTQAALGADIMVPTL-----------------------------------------------YGK-  292 (377)
T ss_pred             EEEcCcEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------CCC-
Confidence            35699999999999999999998888541                                               222 


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCeeEEE
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLHTTV  265 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~~~~  265 (345)
                      ++|+||+|+++|++++++|+|.+..+ ...|||||++++..++.+++++.+|+.++
T Consensus       293 i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l  348 (377)
T PRK14298        293 VKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREF  348 (377)
T ss_pred             EEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence            78999999999999999999998543 45799999999999999999887776554

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.70  E-value=5.4e-08  Score=95.55  Aligned_cols=83  Identities=19%  Similarity=0.265  Sum_probs=69.0

Q ss_pred             ccCCeeEEEEecHHHHhcCcEEEEEcC-----------------------------------------------------
Q 019162          257 EGNNLHTTVTVTLVQALVGFEKTIEHL-----------------------------------------------------  283 (345)
Q Consensus       257 ~g~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------------  283 (345)
                      .|.|+.+.+.|||.|++.|+++.|...                                                     
T Consensus       126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  205 (386)
T PRK14289        126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG  205 (386)
T ss_pred             CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence            488999999999999999998766431                                                     


Q ss_pred             -------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHH
Q 019162          284 -------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTR  339 (345)
Q Consensus       284 -------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~  339 (345)
                                         +.+.++|.||+++++|++++|+|+|+|...+...|||||+|+|..|+.+..+...+
T Consensus       206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL  280 (386)
T PRK14289        206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDL  280 (386)
T ss_pred             cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccce
Confidence                               11357889999999999999999999965444569999999999999888766544

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.68  E-value=4.3e-08  Score=95.75  Aligned_cols=81  Identities=22%  Similarity=0.343  Sum_probs=68.5

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.++.|..-                                               ..+.
T Consensus       261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l-----------------------------------------------dg~~  293 (372)
T PRK14300        261 KVDGANLHCKLPISFVNAALGGEIEVPVI-----------------------------------------------EGGK  293 (372)
T ss_pred             EEecCCEEEEEecCHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence            45689999999999999999998888641                                               2357


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCccccc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREG  258 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g  258 (345)
                      ++|+||+|+++|++++++|+|.+.++ ..+|||||++++..+..+.-+.
T Consensus       294 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~~~v~~P~~ls~~q  342 (372)
T PRK14300        294 VNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQ  342 (372)
T ss_pred             EEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHH
Confidence            99999999999999999999998543 5689999999999887765444

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.68  E-value=2.2e-08  Score=97.76  Aligned_cols=84  Identities=23%  Similarity=0.397  Sum_probs=70.1

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|++++|..-                                               .. .
T Consensus       258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dg-~  289 (371)
T PRK14287        258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL-----------------------------------------------NG-K  289 (371)
T ss_pred             EEecCCeEEEEeccHHHHhCCCEEEEEcC-----------------------------------------------CC-C
Confidence            45699999999999999999998888541                                               12 3


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCee
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNLH  262 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL~  262 (345)
                      ++|+||+|+++|++++++|+|.+.. +...|||||+|++..++.+.++...++
T Consensus       290 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~ll  342 (371)
T PRK14287        290 VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELM  342 (371)
T ss_pred             EEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEEEEEEcCCCCCHHHHHHH
Confidence            7999999999999999999999854 345799999999999988877665443

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=98.67  E-value=3e-08  Score=96.29  Aligned_cols=83  Identities=23%  Similarity=0.436  Sum_probs=69.6

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+++.|++..+.|||+||+.|+++.|..-                                               .. .
T Consensus       263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l-----------------------------------------------dG-~  294 (354)
T TIGR02349       263 ERDGNDLYIEVPISFTQAILGGEIEVPTL-----------------------------------------------DG-D  294 (354)
T ss_pred             EEecCCEEEEEEeCHHHHhCCCeEEEecC-----------------------------------------------Cc-e
Confidence            35689999999999999999998887531                                               12 5


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCe
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNL  261 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL  261 (345)
                      ++|.||+|+++|++++++|+|.+..+ ..+|||||++++..++.++.+..++
T Consensus       295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~~~v~~P~~l~~~~~~~  346 (354)
T TIGR02349       295 VKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKEL  346 (354)
T ss_pred             EEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            89999999999999999999998544 4689999999999888887766543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.66  E-value=6.4e-08  Score=95.12  Aligned_cols=77  Identities=27%  Similarity=0.380  Sum_probs=65.1

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.++.|..                                                -+..
T Consensus       289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~------------------------------------------------ldg~  320 (392)
T PRK14279        289 GRDGDDLTVTVPVSFTELALGSTLSVPT------------------------------------------------LDGP  320 (392)
T ss_pred             eeecCcEEEEEEccHHHHcCCceEEEEc------------------------------------------------CCce
Confidence            3569999999999999999999888754                                                1223


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|+||+|+++|++++++|+|.+..++.+|||||++++.-+....
T Consensus       321 i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~~v~~P~~Ls  365 (392)
T PRK14279        321 VGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTVKVAVPPNLD  365 (392)
T ss_pred             EEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence            799999999999999999999986666789999999999665443

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.65  E-value=3.3e-08  Score=96.56  Aligned_cols=84  Identities=23%  Similarity=0.392  Sum_probs=69.2

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.+++|..-                                               ... 
T Consensus       260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl-----------------------------------------------dG~-  291 (373)
T PRK14301        260 QRQGQDLVVTQEISFVQAALGDRIEVPTL-----------------------------------------------DDP-  291 (373)
T ss_pred             eeecCcEEEEEEecHHHHhCCCeEEEecC-----------------------------------------------Ccc-
Confidence            35689999999999999999998888541                                               223 


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccCCee
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGNNLH  262 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~DL~  262 (345)
                      ++|.||+|+++|++++|+|+|.+..+ ..+|||||++++..++.+..+..+++
T Consensus       292 i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I~~~V~~P~~l~~~q~~~l  344 (373)
T PRK14301        292 VTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELL  344 (373)
T ss_pred             EEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHH
Confidence            89999999999999999999998544 45899999999998887766554433

>PRK14293 chaperone protein DnaJ; Provisional

Probab=98.61  E-value=1.5e-07  Score=92.12  Aligned_cols=84  Identities=20%  Similarity=0.237  Sum_probs=69.6

Q ss_pred             ccCCeeEEEEecHHHHhcCcEEEEEcC--------CC-------------------------------------------
Q 019162          257 EGNNLHTTVTVTLVQALVGFEKTIEHL--------DE-------------------------------------------  285 (345)
Q Consensus       257 ~g~DL~~~~~Isl~eAl~G~~~~i~~l--------dg-------------------------------------------  285 (345)
                      .+.|+...+.|||.|++.|++++|...        +|                                           
T Consensus       115 kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G  194 (374)
T PRK14293        115 RGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNG  194 (374)
T ss_pred             CCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCc
Confidence            588999999999999999998766331        11                                           


Q ss_pred             ---------------------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHHHHHHH
Q 019162          286 ---------------------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQKTRI  340 (345)
Q Consensus       286 ---------------------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~q~~~l  340 (345)
                                           +.++|.||+++++|++++|+|+|+|...+...|||||+|+|..|+.++.++..++
T Consensus       195 ~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~  270 (374)
T PRK14293        195 TGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINIL  270 (374)
T ss_pred             ceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceE
Confidence                                 2567889999999999999999998655444699999999999999998776553

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.61  E-value=7.3e-08  Score=94.64  Aligned_cols=76  Identities=25%  Similarity=0.357  Sum_probs=64.8

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.+++|..                                               ...+.
T Consensus       282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~t-----------------------------------------------ldG~~  314 (389)
T PRK14295        282 GRSGDNLTVTVPVTFPEAALGAEVRVPT-----------------------------------------------LGGPP  314 (389)
T ss_pred             EEecCCEEEEEeecHHHHhCCCeEEEEC-----------------------------------------------CCCCE
Confidence            3568999999999999999999888843                                               12357


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDR  253 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~  253 (345)
                      ++|+||+|+++|++++++|+|.+..++.+|||||++++.=...
T Consensus       315 ~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~~v~~P~~  357 (389)
T PRK14295        315 VTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTVEVAVPKD  357 (389)
T ss_pred             EEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEEEEECCCC
Confidence            8999999999999999999999866667899999999985443

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.59  E-value=9.3e-08  Score=93.74  Aligned_cols=74  Identities=23%  Similarity=0.410  Sum_probs=63.2

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+.|.|+++++.|||+||+.|++++|..-                                               ..+.
T Consensus       271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l-----------------------------------------------dG~~  303 (382)
T PRK14291        271 ERRGDNLYLDVNITVAEAVLGTELEVPLL-----------------------------------------------DGKK  303 (382)
T ss_pred             eeecCCeEEEEEeeHHHHhCCCEEEEecC-----------------------------------------------CCCE
Confidence            35689999999999999999999888641                                               2346


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPH  251 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h  251 (345)
                      ++|.||+|+++|++++|+|+|.+..+ ..+|||||++++.-.
T Consensus       304 l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~~~V~~P  345 (382)
T PRK14291        304 EKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVP  345 (382)
T ss_pred             EEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEeC
Confidence            89999999999999999999998543 467999999999844

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.58  E-value=1.3e-07  Score=92.38  Aligned_cols=82  Identities=18%  Similarity=0.292  Sum_probs=68.9

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+.+++.|||.||+.|.+++|..                                               ...+.
T Consensus       254 ~R~G~DL~~~~~Isl~eAllG~~i~v~t-----------------------------------------------LdG~~  286 (369)
T PRK14288        254 KREGCDLFIEAPVFFTTIALGHTIKVPS-----------------------------------------------LKGDE  286 (369)
T ss_pred             EEeCCEEEEEEecCHHHHhcCCEEEeec-----------------------------------------------CCCCE
Confidence            4569999999999999999999888753                                               13456


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCCcccccC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGN  259 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~f~r~g~  259 (345)
                      ++|+||+|+++|++++++|+|.+.++. ..|||||++++.-++.+..+..
T Consensus       287 l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~ls~~q~  336 (369)
T PRK14288        287 LELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQ  336 (369)
T ss_pred             EEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHH
Confidence            899999999999999999999986554 4699999999998887765543

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.53  E-value=1.9e-07  Score=91.44  Aligned_cols=77  Identities=21%  Similarity=0.371  Sum_probs=64.1

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.+++|..-                                               .. .
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl-----------------------------------------------dg-~  297 (380)
T PRK14276        266 ERDGSTIYYTLPISFVQAALGDTVEVPTV-----------------------------------------------HG-D  297 (380)
T ss_pred             eeecceEEEEEecCHHHHhCCCeEEEEcC-----------------------------------------------CC-c
Confidence            35689999999999999999998888641                                               12 3


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|.||+|+++|++++++|+|.+.. +..+|||||+|++.-.....
T Consensus       298 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~  343 (380)
T PRK14276        298 VELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLN  343 (380)
T ss_pred             EEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEEEEEECCCCCC
Confidence            7999999999999999999999854 34679999999999555443

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.50  E-value=1.6e-07  Score=91.77  Aligned_cols=82  Identities=20%  Similarity=0.317  Sum_probs=67.1

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|+++.|..                                               ...+.
T Consensus       266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ldG~~  298 (372)
T PRK14286        266 ERQGNDLILVRKISLAQAILGAEIEVPT-----------------------------------------------IDGKK  298 (372)
T ss_pred             EEecCCEEEEEEECHHHHhCCCEEEEeC-----------------------------------------------CCCCE
Confidence            3568999999999999999999887753                                               13456


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCCcccccC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGN  259 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~f~r~g~  259 (345)
                      ++|+||+|+++|++++++|+|.+..+ ...|||||+|++.-+..+..+..
T Consensus       299 i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~~~V~~P~~Ls~~qk  348 (372)
T PRK14286        299 AKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQR  348 (372)
T ss_pred             EEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHH
Confidence            89999999999999999999998543 45799999999996665554443

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.48  E-value=3.4e-07  Score=89.62  Aligned_cols=77  Identities=23%  Similarity=0.371  Sum_probs=63.8

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|++++|..-                                               .. .
T Consensus       263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dg-~  294 (376)
T PRK14280        263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL-----------------------------------------------HG-K  294 (376)
T ss_pred             EEecCCEEEEEecCHHHHhCCCEEEEecC-----------------------------------------------Cc-e
Confidence            35699999999999999999998888531                                               12 3


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|.||+|+++|++++++|+|.+.. +...|||||++++.......
T Consensus       295 i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~v~~P~~Ls  340 (376)
T PRK14280        295 VKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLT  340 (376)
T ss_pred             EEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEECCCCCC
Confidence            7999999999999999999999853 34679999999999665444

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.48  E-value=3e-07  Score=89.97  Aligned_cols=78  Identities=22%  Similarity=0.349  Sum_probs=64.4

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|+++.|..                                               .....
T Consensus       259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~t-----------------------------------------------ld~~~  291 (378)
T PRK14278        259 VRDGDDLHCTVSVPMVDAALGTTVTVEA-----------------------------------------------ILDGP  291 (378)
T ss_pred             EEcCCCEEEEEecCHHHHhcCCeEEEec-----------------------------------------------CCCCe
Confidence            4569999999999999999999888853                                               02346


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|.||+|+++|++++++|+|.+.. ++..|||||++++.=...+.
T Consensus       292 i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~~~V~~P~~Ls  337 (378)
T PRK14278        292 SEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLD  337 (378)
T ss_pred             EEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEEcCCCCC
Confidence            8999999999999999999999853 45689999999998444333

>PRK14292 chaperone protein DnaJ; Provisional

Probab=98.47  E-value=1.5e-07  Score=92.04  Aligned_cols=83  Identities=19%  Similarity=0.317  Sum_probs=68.1

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+...+.|||.||+.|++++|..-                                               ... 
T Consensus       258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl-----------------------------------------------dG~-  289 (371)
T PRK14292        258 RREQEHLIYEARIGFAKAALGGQITVPTL-----------------------------------------------DGP-  289 (371)
T ss_pred             ccchhceeEEeccCHHHHhCCCeEEEECC-----------------------------------------------CCC-
Confidence            35689999999999999999999888631                                               112 


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcccccCCe
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFRREGNNL  261 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~r~g~DL  261 (345)
                      .+|.||+|+++|++++++|+|.+.. +..+|||||++++..++.+..+...|
T Consensus       290 ~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~~~v~~P~~l~~~q~~l  341 (371)
T PRK14292        290 QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREA  341 (371)
T ss_pred             EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Confidence            3699999999999999999999854 45689999999999998777655433

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.46  E-value=3.7e-07  Score=89.94  Aligned_cols=77  Identities=25%  Similarity=0.340  Sum_probs=63.3

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.+++|..-                                               .. .
T Consensus       282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-----------------------------------------------dg-~  313 (397)
T PRK14281        282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL-----------------------------------------------DG-A  313 (397)
T ss_pred             EEecCCEEEEEEecHHHHhcCCeEEeecC-----------------------------------------------Cc-c
Confidence            35689999999999999999998888641                                               12 3


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCC-CCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|.||+|+++|++++++|+|.+.. ++..|||||+++|.-.....
T Consensus       314 i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~~~V~~P~~Ls  359 (397)
T PRK14281        314 VKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFVPKEVS  359 (397)
T ss_pred             EEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEEEEEEcCCCCC
Confidence            7899999999999999999999853 34679999999998544433

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.43  E-value=1.1e-06  Score=86.19  Aligned_cols=78  Identities=23%  Similarity=0.328  Sum_probs=64.7

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHL----------------------------------------------------  283 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l----------------------------------------------------  283 (345)
                      +.|.|+..++.|||.|++.|++++|...                                                    
T Consensus       117 ~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  196 (378)
T PRK14283        117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQ  196 (378)
T ss_pred             cCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCC
Confidence            3589999999999999999998766331                                                    


Q ss_pred             --------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCC
Q 019162          284 --------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLT  333 (345)
Q Consensus       284 --------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~  333 (345)
                                          +.+.++|.||+++++|++++++|+|+|.......|||||+|+|..+..+.
T Consensus       197 G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~  266 (378)
T PRK14283        197 GEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFR  266 (378)
T ss_pred             ccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEE
Confidence                                11467788999999999999999999976555579999999999887643

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.42  E-value=1.1e-06  Score=86.23  Aligned_cols=77  Identities=23%  Similarity=0.362  Sum_probs=64.3

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHL----------------------------------------------------  283 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l----------------------------------------------------  283 (345)
                      +.|.|+.+.+.|||.||+.|++++|...                                                    
T Consensus       119 ~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  198 (380)
T PRK14297        119 QRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCG  198 (380)
T ss_pred             CCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCC
Confidence            3589999999999999999998776431                                                    


Q ss_pred             --------------------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162          284 --------------------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL  332 (345)
Q Consensus       284 --------------------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l  332 (345)
                                          ..++++|.||+++++|++++++|+|++.......|||||+|+|..++.+
T Consensus       199 G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f  267 (380)
T PRK14297        199 GSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTF  267 (380)
T ss_pred             CCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCE
Confidence                                1146788899999999999999999986554446999999999988765

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.37  E-value=4.1e-07  Score=87.43  Aligned_cols=81  Identities=27%  Similarity=0.460  Sum_probs=67.2

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+.+.|+..++.|+|.+|+.|.+..|..-                                               ... 
T Consensus       260 ~R~g~dL~~~~~Is~~~AalG~~i~vptl-----------------------------------------------~g~-  291 (371)
T COG0484         260 ERDGDDLYCEVPISFTEAALGGEIEVPTL-----------------------------------------------DGR-  291 (371)
T ss_pred             EECCCceEeccccCHHHHhcCCEEEEEec-----------------------------------------------CCC-
Confidence            35689999999999999999988888641                                               223 


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcccccC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFRREGN  259 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~r~g~  259 (345)
                      ++|+||||++.|++++++|+|.+. .+...|||||+|+|.-...+.....
T Consensus       292 ~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~v~v~~P~~ls~~q~  341 (371)
T COG0484         292 VKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVRVKVETPKNLSDEQK  341 (371)
T ss_pred             EEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEEEEEEcCCCCCHHHH
Confidence            999999999999999999999994 5566799999999997776554433

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.36  E-value=1.7e-06  Score=84.93  Aligned_cols=76  Identities=24%  Similarity=0.333  Sum_probs=62.5

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcC--------C-------------------------------------------
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHL--------D-------------------------------------------  284 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l--------d-------------------------------------------  284 (345)
                      +.|.|+.+.+.|||.|++.|++++|...        +                                           
T Consensus       126 ~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~  205 (386)
T PRK14277        126 QKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCH  205 (386)
T ss_pred             CCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCC
Confidence            3589999999999999999998876441        1                                           


Q ss_pred             ---------------------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC
Q 019162          285 ---------------------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT  331 (345)
Q Consensus       285 ---------------------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~  331 (345)
                                           .+.++|.||+++++|++++++|+|+|...+...|||||+|+|.-...
T Consensus       206 G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~  273 (386)
T PRK14277        206 GEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPL  273 (386)
T ss_pred             cceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCC
Confidence                                 13578889999999999999999999654445699999999986544

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.33  E-value=2.1e-06  Score=83.86  Aligned_cols=77  Identities=18%  Similarity=0.280  Sum_probs=63.2

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcC----------------------------------------------------
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHL----------------------------------------------------  283 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~l----------------------------------------------------  283 (345)
                      +.|.|+.+.+.|||.||+.|++++|...                                                    
T Consensus       120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~  199 (372)
T PRK14296        120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN  199 (372)
T ss_pred             CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence            4589999999999999999998776431                                                    


Q ss_pred             -------------C-------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCC
Q 019162          284 -------------D-------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTL  332 (345)
Q Consensus       284 -------------d-------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l  332 (345)
                                   +       .+.++|.||+++++|++++++|+|.+...+...|||||+|+|.-...+
T Consensus       200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F  268 (372)
T PRK14296        200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVF  268 (372)
T ss_pred             CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCE
Confidence                         0       146788899999999999999999987544456999999999865544

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.33  E-value=4.8e-07  Score=94.76  Aligned_cols=54  Identities=43%  Similarity=0.621  Sum_probs=45.8

Q ss_pred             CcccccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162           24 GKSYYEVLQVPRGA----SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD   80 (345)
Q Consensus        24 ~~~~y~iLgv~~~a----s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d   80 (345)
                      --+-|+||.|+-+-    ..++||++|++||.+||||+||.   -.++|..+|+|||.|+.
T Consensus      1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE---GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE---GREMFERVNKAYELLSS 1337 (2235)
T ss_pred             hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch---HHHHHHHHHHHHHHHHH
Confidence            34679999997633    34889999999999999999984   45899999999999983

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.29  E-value=6.4e-07  Score=79.59  Aligned_cols=55  Identities=29%  Similarity=0.620  Sum_probs=48.9

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHH-Hhcc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYE-VLSD   80 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~-~L~d   80 (345)
                      +.||.+|||..+|+.++++.||..|++++|||...+. ...+.|.+|.+||. ||+.
T Consensus        47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~-adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEE-ADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCcc-ccHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999998743 34578999999999 7764

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.27  E-value=1.5e-06  Score=86.11  Aligned_cols=74  Identities=18%  Similarity=0.249  Sum_probs=62.3

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .+.|.|+.+++.|||.||+.|.++.|..                                               ...+.
T Consensus       270 ~R~G~DL~~~~~Isl~eAllG~~i~I~t-----------------------------------------------LdG~~  302 (421)
T PTZ00037        270 KREGGDLFITKKISLYEALTGFVFYITH-----------------------------------------------LDGRK  302 (421)
T ss_pred             EEeCCeEEEEEeCCHHHHhcCCEEEeeC-----------------------------------------------CCCCe
Confidence            4569999999999999999999887753                                               13456


Q ss_pred             EEEEecCC--CCCCcEEEEeecCCCCCC--CCCceEEEEEEEcCC
Q 019162          211 VTVDIEKG--MQDGQEVVFYEDGEPKID--GEPGDLKFRIRTAPH  251 (345)
Q Consensus       211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GDL~v~i~~~~h  251 (345)
                      ++|+||+|  +++|++++|+|+|.+..+  +..|||||+++|.=.
T Consensus       303 l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P  347 (421)
T PTZ00037        303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFP  347 (421)
T ss_pred             EEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcC
Confidence            89999999  999999999999998433  357999999999844

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.26  E-value=1.9e-06  Score=67.59  Aligned_cols=50  Identities=28%  Similarity=0.424  Sum_probs=43.7

Q ss_pred             ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccc
Q 019162           28 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDS   81 (345)
Q Consensus        28 y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~   81 (345)
                      -.||||+++++.+.||+|+|++....|||+.. +|   -.-.+||||+++|...
T Consensus        59 ~lIL~v~~s~~k~KikeaHrriM~~NHPD~GG-SP---YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   59 ALILGVTPSLDKDKIKEAHRRIMLANHPDRGG-SP---YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHhCCCccccHHHHHHHHHHHHHcCCCcCCC-CH---HHHHHHHHHHHHHhcc
Confidence            35899999999999999999999999999997 66   3445799999999754

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=98.20  E-value=2.4e-06  Score=87.98  Aligned_cols=70  Identities=51%  Similarity=0.920  Sum_probs=66.1

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL   95 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   95 (345)
                      +|||+||||+++|+.++||+|||+||++||||++++ +.+.++|++|++||++|+||.+|+.||.||..+.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~   71 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV   71 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence            699999999999999999999999999999999984 7788999999999999999999999999997654

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>TIGR02642 phage_xxxx uncharacterized phage protein

Probab=97.31  E-value=0.00024  Score=62.34  Aligned_cols=46  Identities=20%  Similarity=0.382  Sum_probs=39.7

Q ss_pred             CCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEe
Q 019162          171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFY  228 (345)
Q Consensus       171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~  228 (345)
                      .|+|+|.+...           .++|+.|+|.|.+..++++.+.+ .|+.+|++|++.
T Consensus       104 ~C~G~G~~i~~-----------~~~C~~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~  149 (186)
T TIGR02642       104 RCRGTGLIQRR-----------QRECDTCAGTGRFRPTVEDLLKS-FGVDSGAAIVLK  149 (186)
T ss_pred             CCCCeeEEecC-----------CCCCCCCCCccEEeeeEEEEEEe-eeccCCceeeHH
Confidence            68999985421           25799999999999999999999 999999999874

This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.10  E-value=0.00036  Score=58.69  Aligned_cols=69  Identities=23%  Similarity=0.468  Sum_probs=55.1

Q ss_pred             hccCCcccccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCc-----HHHHHHHHHHHHHHHHhcccccccccc
Q 019162           20 NVIAGKSYYEVLQVPR--GASDEQIKRAYRKLALKYHPDKNQGN-----EEANKRFAEINNAYEVLSDSETRNIYD   88 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~--~as~~eIk~ayr~la~~~hPd~~~~~-----~~a~~~f~~i~~Ay~~L~d~~~r~~yd   88 (345)
                      ++...++||.++|...  ...+..+..-|.-..++.|||+....     ..|.+...++|+||.+|.||-+|+.|=
T Consensus         3 ~~~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi   78 (168)
T KOG3192|consen    3 KMGSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL   78 (168)
T ss_pred             ccchHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            3455679999997544  55677777789999999999995311     247788999999999999999999985

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=96.63  E-value=0.0041  Score=59.44  Aligned_cols=75  Identities=17%  Similarity=0.235  Sum_probs=60.8

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++++|+...++++|.|+..|..+.+..                                               ...+.
T Consensus       248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~-----------------------------------------------ldGr~  280 (337)
T KOG0712|consen  248 DRRGSDLYRKLTISLVEALCGFQRVWET-----------------------------------------------LDGRL  280 (337)
T ss_pred             eecccccceeeecchhhccccceEEEEc-----------------------------------------------cCCce
Confidence            3568888888888888888886665541                                               14567


Q ss_pred             EEEEecCC--CCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCC
Q 019162          211 VTVDIEKG--MQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD  252 (345)
Q Consensus       211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~  252 (345)
                      +++.++||  +.+|++.+++|+|.+..+...|||||.++|+=.+
T Consensus       281 l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi~~~v~fp~  324 (337)
T KOG0712|consen  281 LKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYIKFEVKFPK  324 (337)
T ss_pred             EEEecCCCceeChhHEEeecCCCcccccCCCCcEEEEEEEEcCC
Confidence            89999999  9999999999999996555599999999998444

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.19  E-value=0.003  Score=55.19  Aligned_cols=54  Identities=41%  Similarity=0.609  Sum_probs=46.8

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--Cc-----HHHHHHHHHHHHHHHHh
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQ--GN-----EEANKRFAEINNAYEVL   78 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~--~~-----~~a~~~f~~i~~Ay~~L   78 (345)
                      .+.|.+|++...++..+|+++|+++...+|||+-.  +.     ..+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            68899999999999999999999999999999842  12     24788999999999853

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=96.09  E-value=0.0067  Score=44.22  Aligned_cols=36  Identities=28%  Similarity=0.463  Sum_probs=22.0

Q ss_pred             cCCCccceEEEEEecCceEEEEeecccccccCceEEE
Q 019162          170 RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYER  206 (345)
Q Consensus       170 ~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~  206 (345)
                      +.|+|+|.+...+..++++.+ ....|+.|+|.|.+.
T Consensus        19 ~~C~G~G~~~~~~~~~~~~~~-~~~~C~~C~G~G~~i   54 (66)
T PF00684_consen   19 PQCNGSGQVTRRQQTPGGVFQ-MQQTCPKCGGTGKII   54 (66)
T ss_dssp             TTSSSSSEEEEEEESSSTTEE-EEEE-TTTSSSSEE-
T ss_pred             cCCCCeeEEEEEEeCCCeEEE-EEEECCCCcceeeEE
Confidence            479999996555444333322 244699999988764

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.84  E-value=0.0038  Score=54.60  Aligned_cols=64  Identities=33%  Similarity=0.481  Sum_probs=50.6

Q ss_pred             ccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHH-----HHHHHHHHHHHHHHhccccccccccc
Q 019162           26 SYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEE-----ANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        26 ~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~-----a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      +|+..+|..+.+  ..+.++..|+.+.+.+|||+.....+     +.+.+..++.||.+|.+|-+|..|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            456666666644  45678899999999999999864432     45688999999999999999998853

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=94.59  E-value=0.063  Score=53.85  Aligned_cols=49  Identities=35%  Similarity=0.491  Sum_probs=35.3

Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HH----HHHHHHHHHHHHHH
Q 019162           29 EVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EE----ANKRFAEINNAYEV   77 (345)
Q Consensus        29 ~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~----a~~~f~~i~~Ay~~   77 (345)
                      +=..+..=.+.+++||||||..+..||||-+..   .+    |++.|..+++||..
T Consensus       392 qpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  392 QPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             ccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            334555566999999999999999999997644   23    55556666666653

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=94.40  E-value=0.081  Score=43.71  Aligned_cols=53  Identities=23%  Similarity=0.246  Sum_probs=38.9

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccc
Q 019162           26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE   82 (345)
Q Consensus        26 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~   82 (345)
                      .-..||+|++..+.++|.+.|.+|....+|++.+ +.   -.-.+|..|.|.|..+-
T Consensus        59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGG-Sf---YLQSKV~rAKErl~~El  111 (127)
T PF03656_consen   59 EARQILNVKEELSREEIQKRYKHLFKANDPSKGG-SF---YLQSKVFRAKERLEQEL  111 (127)
T ss_dssp             HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCTS--H---HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcCC-CH---HHHHHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999886 33   44557888998887544

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PLN03165 chaperone protein dnaJ-related; Provisional

Probab=94.39  E-value=0.093  Score=42.29  Aligned_cols=39  Identities=18%  Similarity=0.167  Sum_probs=22.7

Q ss_pred             eeeeC-CCCC-----cCCCccceEEEEEecCceEEEEeecccccccCce
Q 019162          161 NVIKP-APGK-----RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK  203 (345)
Q Consensus       161 ~~~c~-c~g~-----~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g  203 (345)
                      .+.|. |.|+     +.|+|+|.+...+ ++ ++  .....|+.|+|.|
T Consensus        41 ~v~C~~C~GsG~~~C~~C~G~G~v~~~~-~g-~~--q~~~~C~~C~G~G   85 (111)
T PLN03165         41 TQPCFPCSGTGAQVCRFCVGSGNVTVEL-GG-GE--KEVSKCINCDGAG   85 (111)
T ss_pred             CCCCCCCCCCCCcCCCCCcCcCeEEEEe-CC-cE--EEEEECCCCCCcc
Confidence            35676 7665     5788999865443 33 22  2344566666665

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=86.40  E-value=1.5  Score=39.00  Aligned_cols=38  Identities=34%  Similarity=0.487  Sum_probs=29.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhc
Q 019162           34 PRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLS   79 (345)
Q Consensus        34 ~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~   79 (345)
                      +++||.+||++|+.++..+|-     +|+   +.-.+|-.||+.+.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~-----gd~---~~~~~IEaAYD~IL   38 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYA-----GDE---KSREAIEAAYDAIL   38 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhc-----CCH---HHHHHHHHHHHHHH
Confidence            579999999999999999982     233   34556889999654

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>PF00684 DnaJ_CXXCXGXG: DnaJ central domain; InterPro: IPR001305 The hsp70 chaperone machine performs many diverse roles in the cell, including folding of nascent proteins, translocation of polypeptides across organelle membranes, coordinating responses to stress, and targeting selected proteins for degradation

Probab=85.99  E-value=0.64  Score=33.70  Aligned_cols=21  Identities=14%  Similarity=0.634  Sum_probs=15.0

Q ss_pred             CCCccceEEEEEecCceEEEEeecccccccCce
Q 019162          171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVK  203 (345)
Q Consensus       171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g  203 (345)
                      .|+|+|.++            .+++|+.|+|.|
T Consensus        46 ~C~G~G~~i------------~~~~C~~C~G~g   66 (66)
T PF00684_consen   46 KCGGTGKII------------EKDPCKTCKGSG   66 (66)
T ss_dssp             TTSSSSEE-------------TSSB-SSSTTSS
T ss_pred             CCcceeeEE------------CCCCCCCCCCcC
Confidence            688888743            267899999975

DnaJ is a member of the hsp40 family of molecular chaperones, which is also called the J-protein family, the members of which regulate the activity of hsp70s. DnaJ (hsp40) binds to DnaK (hsp70) and stimulates its ATPase activity, generating the ADP-bound state of DnaK, which interacts stably with the polypeptide substrate []. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. DnaJ consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acid residues, a glycine and phenylalanine-rich domain ('G/F' domain), a central cysteine rich domain (CR-type zinc finger) containing four repeats of a CXXCXGXG motif which can coordinate two zinc atom and a C-terminal domain (CTD) []. This entry represents the central cysteine-rich (CR) domain of DnaJ proteins. This central cysteine rich domain (CR-type zinc finger) has an overall V-shaped extended beta-hairpin topology and contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DnaJ cysteine rich domain and various hydrophobic peptides has been found [].; GO: 0031072 heat shock protein binding, 0051082 unfolded protein binding; PDB: 1NLT_A 2CTT_A 1EXK_A.

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=81.79  E-value=1.4  Score=42.30  Aligned_cols=55  Identities=35%  Similarity=0.567  Sum_probs=43.5

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCC----cHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           36 GASDEQIKRAYRKLALKYHPDKNQG----NEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        36 ~as~~eIk~ayr~la~~~hPd~~~~----~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      -++..+|+.+|+..+...||++...    ....++.|++|.+||++|++..+|..+|..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~~   61 (335)
T KOG0724|consen    3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDSW   61 (335)
T ss_pred             cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhhh
Confidence            3678899999999999999998741    223557799999999999987666666653

>PF13446 RPT: A repeated domain in UCH-protein

Probab=80.17  E-value=3.7  Score=29.16  Aligned_cols=26  Identities=23%  Similarity=0.387  Sum_probs=23.8

Q ss_pred             ccccccCCCCCCCHHHHHHHHHHHHH
Q 019162           26 SYYEVLQVPRGASDEQIKRAYRKLAL   51 (345)
Q Consensus        26 ~~y~iLgv~~~as~~eIk~ayr~la~   51 (345)
                      +-|+.|||+++++.+.|-.+|+....
T Consensus         6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    6 EAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            45999999999999999999998876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	345
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		2e-18
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		2e-18
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-18
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		2e-18
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		1e-17
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		2e-17
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		2e-17
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		4e-15
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		7e-15
2qld_A	183	Human Hsp40 Hdj1 Length = 183		7e-15
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		7e-15
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		8e-15
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		2e-14
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		2e-14
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		3e-14
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		7e-14
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		1e-13
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-13
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		1e-13
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-13
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		5e-13
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		2e-11
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		4e-11
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		1e-09
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		8e-08
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-07
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		2e-07
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-07
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		3e-07
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		7e-07
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		2e-06
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		2e-06
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		2e-04

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSET 83
          GK YY+ L + RGASDE+IKRAYR+ AL+YHPDKN+    A ++F EI  AY+VLSD   
Sbjct: 2  GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60
Query: 84 RNIYDTYGEEGLK 96
          R I+D YGEEGLK
Sbjct: 61 REIFDRYGEEGLK 73

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE-ANKRFAEINNAYEVLSDSETR 84
          SYYE+L VPR AS + IK+AYR+ AL++HPDKN  N+E A K+F E+  AYEVLSD   R
Sbjct: 3  SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKR 62
Query: 85 NIYDTYGEEGL 95
           IYD YG EGL
Sbjct: 63 EIYDRYGREGL 73

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           A + YYE+L V + A + +I++AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 83  TRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG 121
            R  YD YG    +Q             +  DIF   FG
Sbjct: 61  KRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFG 98

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           A + YYE+L V + A + +I++AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 83  TRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG 121
            R  YD YG    +Q             +  DIF   FG
Sbjct: 61  KRAAYDQYGHAAFEQGGM-GGGGFGGGADFSDIFGDVFG 98

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/66 (68%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRN 85
          YYEVL VPR AS E IK+AYRKLALK+HPDKN  N EEA +RF ++  AYEVLSD++ R+
Sbjct: 11 YYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRD 70
Query: 86 IYDTYG 91
          IYD YG
Sbjct: 71 IYDRYG 76

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/75 (50%), Positives = 55/75 (73%)
Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          A + YYE+L V + A + +I++AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+
Sbjct: 1  AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60
Query: 83 TRNIYDTYGEEGLKQ 97
           R  YD YG    +Q
Sbjct: 61 KRAAYDQYGHAAFEQ 75

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/73 (56%), Positives = 54/73 (73%)
Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+ 
Sbjct: 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT 74
Query: 83 TRNIYDTYGEEGL 95
           RNIYD YG  GL
Sbjct: 75 KRNIYDKYGSLGL 87

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/67 (61%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETR 84
          +YYEVL V   AS E IK+AYRKLAL++HPDKN  N EEA K+F  ++ AYEVLSDS+ R
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 85 NIYDTYG 91
          ++YD  G
Sbjct: 70 SLYDRAG 76

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 172 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231
           C  + ++ HK++ P                     E   +T++++KG ++G ++ F ++G
Sbjct: 29  CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKKGWKEGTKITFPKEG 74
Query: 232 EPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDIS 291
           +   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + + 
Sbjct: 75  DQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVV 134
Query: 292 TKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
            K + +P   RK  GEG+PL     K+GDL I FEV+FP  + +  +T +++VL
Sbjct: 135 FKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 188

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 172 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231
           C  + ++ HK++ P                     E   +T++++KG ++G ++ F ++G
Sbjct: 22  CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKKGWKEGTKITFPKEG 67
Query: 232 EPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDIS 291
           +   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + + 
Sbjct: 68  DQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVV 127
Query: 292 TKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
            K + +P   RK  GEG+PL     K+GDL I FEV+FP  + +  +T +++VL
Sbjct: 128 FKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 181

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 130/330 (39%), Gaps = 55/330 (16%)
Query: 20  NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLS 79
           N +  K YY +L V      + IK AYR+LA KYHPD ++ N +A  +F ++  A+EVL 
Sbjct: 23  NAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLK 81
Query: 80  DSETRNIYDTYGEEGLKQH--------AAXXXXXXXXXVNIQDIFSSFFGGGPME-EDEK 130
           D + R  YD      L QH                    +  DIFSS FG    +   + 
Sbjct: 82  DEQRRAEYDQ-----LWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQH 136
Query: 131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQ 190
             +G D+ +E+   LE+                  A   R  +    VY+      +F  
Sbjct: 137 AARGHDLEIEVAVFLEETL----------------AEQTRTISYNLPVYN------VF-G 173
Query: 191 MTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEP-GDLKFRIRTA 249
           M E    +  NVK           I  G+ DGQ +     G P  +G P GDL   I  A
Sbjct: 174 MIESETPKTLNVK-----------IPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIA 222
Query: 250 PHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGM 309
           PH  F   G+N              G + T+  L E ++     G    + +R   G+G 
Sbjct: 223 PHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLR-IKGKG- 280
Query: 310 PLHFSNKKGDLYITFEVLFPTTLTEDQKTR 339
            L      GDL+   +++ PT    D+K R
Sbjct: 281 -LVSKTHTGDLFAVIKIVMPT--KPDEKAR 307

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 172 CNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDG 231
           C  + ++ HK++ P                     E   +T++++KG ++G ++ F ++G
Sbjct: 20  CTKKMKISHKRLNP--------------DGKSIRNEDKILTIEVKKGWKEGTKITFPKEG 65
Query: 232 EPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHLDEHLVDIS 291
           +   +  P D+ F ++  PH+ F+R+G++              G    +  LD   + + 
Sbjct: 66  DQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVV 125
Query: 292 TKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
            K + +P   RK  GEG+PL     K+GDL I FEV+FP  + +  +T +++VL
Sbjct: 126 FKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
          +++Y +L V + AS  +I++A++KLALK HPDKN  N  A+  F +IN AYEVL D + R
Sbjct: 21 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 80
Query: 85 NIYDTYGEEGLK 96
            YD YGE+GL+
Sbjct: 81 KKYDKYGEKGLE 92

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
          YY++L VP+ AS+ QIK+A+ KLA+KYHPDKN+ + +A  +F EI  AYE LSD+  R  
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKE 67
Query: 87 YDTYGEEGL 95
          YDT G    
Sbjct: 68 YDTLGHSAF 76

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
          +++Y +L V + AS  +I++A++KLALK HPDKN  N  A+  F +IN AYEVL D + R
Sbjct: 2  QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61
Query: 85 NIYDTYGEEGL 95
            YD YGE+GL
Sbjct: 62 KKYDKYGEKGL 72

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
          YY++L VPR AS ++IK+AY +LA KYHPD N+ + +A ++F+++  AYEVLSD   R  
Sbjct: 9  YYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQ 68
Query: 87 YDTYG 91
          YD YG
Sbjct: 69 YDAYG 73

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 133 KGDDVIVELDATLEDLYMGGSLKVWREKNVI-KPAPGK-------RRCNCRN----EVYH 180
           +G D+  E+ A+LE+LY G + K+   K ++ K   G+       ++C   N    +   
Sbjct: 10  RGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVT 69
Query: 181 KQIGPGMFQQMTEQV---------------CDQCQNVKYEREGYFVTVDIEKGMQDGQEV 225
           +Q+GP M Q+   +                C  C   K E E   + V +E GM+DGQ +
Sbjct: 70  RQMGP-MIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRI 128
Query: 226 VFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXXXXXXXXGFEKTIEHL-- 283
           VF  + +   D  PGD+ F +   PH  F+R+G++              G E  +EH+  
Sbjct: 129 VFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188
Query: 284 DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFP 329
           D   V I    +  P   +   G+GMP+      G+L I F +  P
Sbjct: 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDP 234

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 3/68 (4%)
Query: 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85
          +YY+VL V   A+ E++K+AYRKLALKYHPDKN    E   +F +I+ AYEVLSD++ R 
Sbjct: 7  TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE---KFKQISQAYEVLSDAKKRE 63
Query: 86 IYDTYGEE 93
          +YD  GE+
Sbjct: 64 LYDKGGEQ 71

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
          YYE+L V RGASDE +K+AYR+LALK+HPDKN     A + F  I  AY VLS+ E R  
Sbjct: 9  YYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPEKRKQ 67
Query: 87 YDTYG 91
          YD +G
Sbjct: 68 YDQFG 72

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 27 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI 86
          YY+VL V   ASD ++K+AYRK+ALK+HPDKN    E   +F +I+ AYEVLSD + R I
Sbjct: 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAE---QFKQISQAYEVLSDEKKRQI 66
Query: 87 YDTYGEE 93
          YD  GEE
Sbjct: 67 YDQGGEE 73

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 203 KYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDRFRREGNNX 261
           K   E   V V+I+ G +DG ++ +  +G+ +  G  PGDL   I+T  H RF R+  + 
Sbjct: 36  KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHL 95
Query: 262 XXXXXXXXXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDL 320
                        GF   +  LD   + I  K I  PK  +    EG P+ +   +KGDL
Sbjct: 96  IXKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGXPIKNQPGQKGDL 155
Query: 321 YITFEVLFPTTLTEDQKTRIKEVL 344
            + F++ FP +LT +QK  IKE L
Sbjct: 156 ILEFDICFPKSLTPEQKKLIKEAL 179

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 28 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIY 87
          Y++L V   A+++++K+ YRK ALKYHPDK  G+ E   +F EI+ A+E+L+D + R IY
Sbjct: 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE---KFKEISEAFEILNDPQKREIY 67
Query: 88 DTYGEEGLK 96
          D YG E  +
Sbjct: 68 DQYGLEAAR 76

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 28 YEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIY 87
          Y VL V R AS   IK+AY+KLA ++HPDKN+ +  A  RF +I+ AYE+LS+ E R  Y
Sbjct: 20 YRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNY 78
Query: 88 DTYG 91
          D YG
Sbjct: 79 DHYG 82

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 26 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN 85
          + Y++L VP  A+  QIK AY +    YHPD+N G+ EA +RF  I+ AY VL  +  R 
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRR 77
Query: 86 IYD 88
           YD
Sbjct: 78 KYD 80

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 211 VTVDIEKGMQDGQEVVFYEDGE--PKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXX 268
           + + ++ G + G ++ +   G+  P+  G    L+F I+   H  F+R+G++        
Sbjct: 38  IDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96
Query: 269 XXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVL 327
                 GF KTI+ +D   + +S     +P +   + G+GMP     +++G+L + ++V 
Sbjct: 97  FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156
Query: 328 FPTTLTEDQKTRIKE 342
           +P +L + QK  I E
Sbjct: 157 YPISLNDAQKRAIDE 171

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG---NEEANKRFAEINNAYEVLSDS 81
           + YY++L V R A  ++I +AYRKLAL++HPD  Q     ++A K+F +I  A EVLSD 
Sbjct: 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 441
Query: 82  ETRNIYD 88
           E R  +D
Sbjct: 442 EMRKKFD 448

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 211 VTVDIEKGMQDGQEVVFYEDGE--PKIDGEPGDLKFRIRTAPHDRFRREGNNXXXXXXXX 268
           + + ++ G + G ++ +   G+  P+  G    L+F I+   H  F+R+G++        
Sbjct: 38  IDIQLKPGWKAGTKITYKNQGDYNPQT-GRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLS 96
Query: 269 XXXXXXGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL-HFSNKKGDLYITFEVL 327
                 GF KTI+ +D   + +S     +P +   + G+GMP     +++G+L + ++V 
Sbjct: 97  FKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156
Query: 328 FPTTLTEDQKTRI 340
           +P +L + QK  I
Sbjct: 157 YPISLNDAQKRAI 169

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG---NEEANKRFAEINNAYEVLSDS 81
           + YY++L V R A  ++I +AYRKLAL++HPD  Q     ++A K+F +I  A EVLSD 
Sbjct: 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP 441
Query: 82  ETRNIYD 88
           E R  +D
Sbjct: 442 EXRKKFD 448

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
          K YY ++ V      + IK AYR+LA KYHPD ++   +A  RF E+  A+EVLSD + R
Sbjct: 5  KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDEQRR 63
Query: 85 NIYD 88
            YD
Sbjct: 64 AEYD 67

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 28 YEVLQVPRGASDEQ-IKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVLSDSET 83
          Y+VL+V R   D+Q + +AYR LA K+HPD+ +  EE   A +RF  I  AYE L D E 
Sbjct: 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 84 RNIYDTY 90
          +  YD Y
Sbjct: 78 KTNYDYY 84

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEINNAYEVL 78
          K +Y +L     A+   +K+ Y+KL L YHPDK   +      EE  ++F EI+ A+++L
Sbjct: 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75
Query: 79 SDSETRNIYD 88
           + ET+  YD
Sbjct: 76 GNEETKKKYD 85

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEINNAYEVL 78
          K +Y +L     A+   +K+ Y+KL L YHPDK   +      EE  ++F EI+ A+++L
Sbjct: 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKIL 69
Query: 79 SDSETRNIYD 88
           + ET+  YD
Sbjct: 70 GNEETKREYD 79

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
          + YY +L     +S EQI   ++  AL+ HPDK+  N +A + F ++  A E+L++ E+R
Sbjct: 20 EDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESR 79
Query: 85 NIYDTY 90
            YD +
Sbjct: 80 ARYDHW 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	345
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	3e-65
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	1e-63
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	1e-59
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	1e-54
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	5e-53
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	1e-42
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	2e-40
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	1e-39
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	3e-39
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	7e-39
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	5e-37
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	9e-37
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	4e-36
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	6e-36
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	6e-35
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	4e-34
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	1e-33
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	2e-33
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	3e-33
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	3e-33
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	8e-33
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	1e-32
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	3e-32
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-31
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-31
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-28
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	8e-28
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	4e-27
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	5e-26
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	4e-20
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	7e-19
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	3e-17
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	3e-16
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-15
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-15
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	4e-15
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	5e-13
2guz_A	71	Mitochondrial import inner membrane translocase su	8e-12
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	1e-10
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	1e-10

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  208 bits (531), Expect = 3e-65
 Identities = 73/323 (22%), Positives = 123/323 (38%), Gaps = 43/323 (13%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           K YY +L V      + IK AYR+LA KYHPD ++ N +A  +F ++  A+EVL D + R
Sbjct: 28  KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRR 86

Query: 85  NIYDTYGEEGLKQHAAGGGR---GGGMGVNIQDIFSSFFG-GGPMEEDEKIVKGDDVIVE 140
             YD   +           +         +  DIFSS FG        +   +G D+ +E
Sbjct: 87  AEYDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIE 146

Query: 141 LDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQ 200
           +   LE+     +  +                                            
Sbjct: 147 VAVFLEETLAEQTRTI----------------------------------SYNLPVYNVF 172

Query: 201 NVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDRFRREGN 259
            +        + V I  G+ DGQ +     G P  + G  GDL   I  APH  F   G+
Sbjct: 173 GMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGH 232

Query: 260 NLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGD 319
           NL   + +   +A +G + T+  L E  + ++    ++  +  +  G+G+        GD
Sbjct: 233 NLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS--KTHTGD 289

Query: 320 LYITFEVLFPTTLTEDQKTRIKE 342
           L+   +++ PT   E  +   ++
Sbjct: 290 LFAVIKIVMPTKPDEKARELWQQ 312

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  199 bits (508), Expect = 1e-63
 Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 35/209 (16%)

Query: 137 VIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVC 196
           V  +L  +LE++Y G                    C  + ++ HK               
Sbjct: 5   VTHDLRVSLEEIYSG--------------------CTKKMKISHK--------------R 30

Query: 197 DQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRR 256
                     E   +T++++KG ++G ++ F ++G+   +  P D+ F ++  PH+ F+R
Sbjct: 31  LNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKR 90

Query: 257 EGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLH-FSN 315
           +G+++     ++L +AL G    +  LD   + +  K + +P   RK  GEG+PL     
Sbjct: 91  DGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPE 150

Query: 316 KKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
           K+GDL I FEV+FP  + +  +T +++VL
Sbjct: 151 KRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  188 bits (481), Expect = 1e-59
 Identities = 65/214 (30%), Positives = 92/214 (42%), Gaps = 38/214 (17%)

Query: 133 KGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMT 192
                 V L  TLE+LY+G   K+            K                       
Sbjct: 2   APRSHEVPLLVTLEELYLGKRKKI------------KVTRKR------------------ 31

Query: 193 EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPH 251
                     K   E   V V+I+ G +DG ++ +  +G+ +  G  PGDL   I+T  H
Sbjct: 32  ------FIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTH 85

Query: 252 DRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPL 311
            RF R+  +L   VT+ LV+AL GF   +  LD   + I  K I  PK  +    EGMP+
Sbjct: 86  PRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPI 145

Query: 312 HFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL 344
                +KGDL + F++ FP +LT +QK  IKE L
Sbjct: 146 KNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  175 bits (447), Expect = 1e-54
 Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 41/208 (19%)

Query: 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQ 194
           + V V L  +LEDL++G                 K      +    K             
Sbjct: 1   ETVQVNLPVSLEDLFVGKKKSF------------KIGRKGPHGASEKTQ----------- 37

Query: 195 VCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDR 253
                           + + ++ G + G ++ +   G+     G    L+F I+   H  
Sbjct: 38  ----------------IDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPN 81

Query: 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLH- 312
           F+R+G++L  T+ ++  ++L+GF KTI+ +D   + +S     +P +   + G+GMP   
Sbjct: 82  FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 141

Query: 313 FSNKKGDLYITFEVLFPTTLTEDQKTRI 340
             +++G+L + ++V +P +L + QK  I
Sbjct: 142 NPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  174 bits (443), Expect = 5e-53
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 34/236 (14%)

Query: 133 KGDDVIVELDATLEDLYMGGSLKVWREKNVI---------KPAPGKRRC-NCR---NEVY 179
           +G D+  E+ A+LE+LY G + K+   K ++         K     ++C +C     +  
Sbjct: 10  RGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKG-AVKKCTSCNGQGIKFV 68

Query: 180 HKQIGPGMFQQMTEQVCDQCQNV----------------KYEREGYFVTVDIEKGMQDGQ 223
            +Q+GP + +   +  CD C                   K E E   + V +E GM+DGQ
Sbjct: 69  TRQMGPMIQR--FQTECDVCHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQ 126

Query: 224 EVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHL 283
            +VF  + +   D  PGD+ F +   PH  F+R+G++L     + L+ A+ G E  +EH+
Sbjct: 127 RIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHV 186

Query: 284 DEHLVDISTK--GITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
               + +      +  P   +   G+GMP+      G+L I F +  P      ++
Sbjct: 187 SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEE 242

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  142 bits (360), Expect = 1e-42
 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 10/103 (9%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           +G+S Y VL + + A+ + IK++YRKLALKYHPDKN  N EA  +F EINNA+ +L+D+ 
Sbjct: 15  SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDAT 74

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPM 125
            RNIYD YG  GL      G              +++F  GP 
Sbjct: 75  KRNIYDKYGSLGLYVAEQFGEEN----------VNTYFVSGPS 107

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  136 bits (345), Expect = 2e-40
 Identities = 48/99 (48%), Positives = 66/99 (66%), Gaps = 1/99 (1%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           A + YYE+L V + A + +I++AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+
Sbjct: 1   AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFG 121
            R  YD YG    +Q    GG G G G +  DIF   FG
Sbjct: 61  KRAAYDQYGHAAFEQ-GGMGGGGFGGGADFSDIFGDVFG 98

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  138 bits (349), Expect = 1e-39
 Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 3/119 (2%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           +++Y +L V + AS  +I++A++KLALK HPDKN  N  A+  F +IN AYEVL D + R
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61

Query: 85  NIYDTYGEEGLKQHAAGGGRG---GGMGVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVE 140
             YD YGE+GL+ +  G             I D           E D  +  G+   V 
Sbjct: 62  KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVN 120

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  133 bits (336), Expect = 3e-39
 Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDS 81
              +YYEVL V   AS E IK+AYRKLAL++HPDKN  N EEA K+F  ++ AYEVLSDS
Sbjct: 7   GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDS 66

Query: 82  ETRNIYDTYGEEGLKQHAAGGGRGGG 107
           + R++YD  G +  +      G   G
Sbjct: 67  KKRSLYDRAGCDSWRAGGGASGPSSG 92

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  132 bits (334), Expect = 7e-39
 Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 1/82 (1%)

Query: 27  YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRN 85
           YYE+L VPR AS + IK+AYR+ AL++HPDKN  N E A K+F E+  AYEVLSD   R 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63

Query: 86  IYDTYGEEGLKQHAAGGGRGGG 107
           IYD YG EGL     G  R   
Sbjct: 64  IYDRYGREGLTGTGTGPSRAEA 85

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  126 bits (320), Expect = 5e-37
 Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 1/76 (1%)

Query: 24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSET 83
          GK YY+ L + RGASDE+IKRAYR+ AL+YHPDKN+    A ++F EI  AY+VLSD   
Sbjct: 2  GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60

Query: 84 RNIYDTYGEEGLKQHA 99
          R I+D YGEEGLK   
Sbjct: 61 REIFDRYGEEGLKGSG 76

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  127 bits (320), Expect = 9e-37
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
              Y++L V   A+++++K+ YRK ALKYHPDK  G+ E   +F EI+ A+E+L+D + R
Sbjct: 8   TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE---KFKEISEAFEILNDPQKR 64

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMG 109
            IYD YG E  +      G GG  G
Sbjct: 65  EIYDQYGLEAARSGGPSFGPGGPGG 89

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  125 bits (316), Expect = 4e-36
 Identities = 31/85 (36%), Positives = 42/85 (49%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           +  + Y++L VP  A+  QIK AY +    YHPD+N G+ EA +RF  I+ AY VL  + 
Sbjct: 15  SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSAT 74

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGG 107
            R  YD            G G   G
Sbjct: 75  LRRKYDRGLLSDEDLRGPGSGPSSG 99

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  124 bits (313), Expect = 6e-36
 Identities = 45/75 (60%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDS 81
              YYEVL VPR AS E IK+AYRKLALK+HPDKN  N EEA +RF ++  AYEVLSD+
Sbjct: 7  GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA 66

Query: 82 ETRNIYDTYGEEGLK 96
          + R+IYD YG     
Sbjct: 67 KKRDIYDRYGSGPSS 81

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  122 bits (309), Expect = 6e-35
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 25  KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
           + YY +L     +S EQI   ++  AL+ HPDK+  N +A + F ++  A E+L++ E+R
Sbjct: 20  EDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESR 79

Query: 85  NIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFG 121
             YD +    +        +   +  +         G
Sbjct: 80  ARYDHWRRSQMSM---PFQQWEALN-DSVKTSGPSSG 112

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  121 bits (306), Expect = 4e-34
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 10/112 (8%)

Query: 18  ALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEI 71
           A+  +  K +Y +L     A+   +K+ Y+KL L YHPDK   +      EE  ++F EI
Sbjct: 3   AVEQMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEI 62

Query: 72  NNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGG 123
           + A+++L + ET+  YD        +            V ++++  +     
Sbjct: 63  DQAWKILGNEETKREYDLQR----CEDDLRNVGPVDAQVYLEEMSWNEGDHS 110

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score =  119 bits (301), Expect = 1e-33
 Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPL 311
           F+R+G++L     + L+ A+ G E  +EH+    + +      +  P   +   G+GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 312 HFSNKKGDLYITFEVLFPT--TLTEDQKTRIKEVL 344
                 G+L I F + FP     +E+   +++E+L
Sbjct: 62  PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEIL 96

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  118 bits (297), Expect = 2e-33
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)

Query: 23  AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
           +  SYY++L VP+ AS+ QIK+A+ KLA+KYHPDKN+ + +A  +F EI  AYE LSD+ 
Sbjct: 5   SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDAN 63

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGG 107
            R  YDT G           G   G
Sbjct: 64  RRKEYDTLGHSAFTSGKGQSGPSSG 88

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  117 bits (296), Expect = 3e-33
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
               Y VL V R AS   IK+AY+KLA ++HPDKN+ +  A  RF +I+ AYE+LS+ E
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEE 73

Query: 83 TRNIYDTYGEEGLK 96
           R  YD YG     
Sbjct: 74 KRTNYDHYGSGPSS 87

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  117 bits (295), Expect = 3e-33
 Identities = 34/72 (47%), Positives = 49/72 (68%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          +   YY++L VPR AS ++IK+AY +LA KYHPD N+ + +A ++F+++  AYEVLSD  
Sbjct: 5  SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEV 64

Query: 83 TRNIYDTYGEEG 94
           R  YD YG   
Sbjct: 65 KRKQYDAYGSGP 76

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  115 bits (291), Expect = 8e-33
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 3/69 (4%)

Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
            YY+VL V   ASD ++K+AYRK+ALK+HPDKN    E   +F +I+ AYEVLSD + R
Sbjct: 8  TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAE---QFKQISQAYEVLSDEKKR 64

Query: 85 NIYDTYGEE 93
           IYD  GEE
Sbjct: 65 QIYDQGGEE 73

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  115 bits (291), Expect = 1e-32
 Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)

Query: 18  ALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEI 71
           AL     K +Y +L     A+   +K+ Y+KL L YHPDK   +      EE  ++F EI
Sbjct: 9   ALEQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEI 68

Query: 72  NNAYEVLSDSETRNIYDTYGEEGLKQHAAGGG 103
           + A+++L + ET+  YD              G
Sbjct: 69  DQAWKILGNEETKKKYDLQR------SGPSSG 94

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  114 bits (288), Expect = 3e-32
 Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          +   YYE+L V RGASDE +K+AYR+LALK+HPDKN     A + F  I  AY VLS+ E
Sbjct: 5  SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA-PGATEAFKAIGTAYAVLSNPE 63

Query: 83 TRNIYDTYGEEGLK 96
           R  YD +G     
Sbjct: 64 KRKQYDQFGSGPSS 77

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  113 bits (284), Expect = 1e-31
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDS 81
            K    V++      + + K+  R+L LK+HPDKN  N + AN+ F  + N    L   
Sbjct: 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRL--- 70

Query: 82 ETRNIYDTYGEEGLKQ 97
          E +   D   +   ++
Sbjct: 71 EKQAFLDQNADRASRR 86

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  112 bits (283), Expect = 3e-31
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 23 AGKSYYEVLQVPRGASDEQ-IKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVL 78
            ++ Y+VL+V R   D+Q + +AYR LA K+HPD+ +  EE   A +RF  I  AYE L
Sbjct: 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETL 72

Query: 79 SDSETRNIYDTYGEEGLKQ 97
           D E +  YD Y +   ++
Sbjct: 73 KDDEAKTNYDYYLDHPDQR 91

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  107 bits (269), Expect = 2e-28
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 25  KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
               ++L + R A  +   +++AY K   ++HPDK  G+EE   +  ++N  Y+ + D  
Sbjct: 11  LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG-GDEE---KMKKMNTLYKKMEDGV 66

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFF 120
                  +G        A       +   +  I+   +
Sbjct: 67  KYAHQPDFGGFW----DATEVFASSLNPGVDAIYCKQW 100

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score =  104 bits (260), Expect = 8e-28
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 18/117 (15%)

Query: 25  KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
               ++L + R A  +   +++AY K   ++HPDK  G+EE   +  ++N  Y+ + D  
Sbjct: 8   LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG-GDEE---KMKKMNTLYKKMEDGV 63

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIFSSFFGGGPMEE---DEKIVKGDD 136
                  +G           G          D +  ++     E     E++   DD
Sbjct: 64  KYAHQPDFGGFWDATEIPTYG---------TDEWEQWWNAFNEENLFCSEEMPSSDD 111

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  101 bits (253), Expect = 4e-27
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD 80
          +   K  +++L V  GAS +++ +AYRKLA+  HPDK      +   F  + NA   L  
Sbjct: 23 IRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLK 81

Query: 81 SETRNIYD 88
          +       
Sbjct: 82 NIKSGPSS 89

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  107 bits (269), Expect = 5e-26
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 3/129 (2%)

Query: 15  LCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNA 74
               +     +++Y +L V + AS  +I++A++KLALK HPDKN  N  A+  F +IN A
Sbjct: 11  SSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRA 70

Query: 75  YEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGMGVNIQDIF---SSFFGGGPMEEDEKI 131
           YEVL D + R  YD YGE+GL+ +  G             I+            E D  +
Sbjct: 71  YEVLKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAV 130

Query: 132 VKGDDVIVE 140
             G+   V 
Sbjct: 131 NSGELWFVN 139

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 90.1 bits (224), Expect = 4e-20
 Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 3/75 (4%)

Query: 17  YALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE---ANKRFAEINN 73
             L     + YY++L V R A  ++I +AYRKLAL++HPD  Q  EE   A K+F +I  
Sbjct: 374 RLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAA 433

Query: 74  AYEVLSDSETRNIYD 88
           A EVLSD E R  +D
Sbjct: 434 AKEVLSDPEMRKKFD 448

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 82.2 bits (202), Expect = 7e-19
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 11  LLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE---ANKR 67
           LL  +     + AG++ ++ + +    + EQ+K+ YRK  L  HPDK  G      A   
Sbjct: 105 LLSTMHTV--LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMI 162

Query: 68  FAEINNAYEVLSDSETRNIY 87
           F E+N+A+    +   + +Y
Sbjct: 163 FMELNDAWSEFENQGQKPLY 182

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 74.6 bits (183), Expect = 3e-16
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 27 YYEVLQVPRGAS--DEQIKRAYRKLALKYHPDKNQGNEEANKR-----FAEINNAYEVLS 79
          Y+ +  +P       + +   ++ L  +YHPDK     +A +       A IN A++ L 
Sbjct: 3  YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 80 DSETRNIYD 88
              R  Y 
Sbjct: 63 HPLMRAEYL 71

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 73.2 bits (179), Expect = 2e-15
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 11  LLCALCYAL-NVIAGKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEEANKR 67
             C  C AL      + Y+ ++   R       +++  Y++L    HPD      +  K 
Sbjct: 28  FFCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKD 87

Query: 68  FA-----EINNAYEVLSDSETRNIYD 88
           F+      +N+AY+ L    +R +Y 
Sbjct: 88  FSEKHSTLVNDAYKTLLAPLSRGLYL 113

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 69.6 bits (170), Expect = 2e-15
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 25 KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          +   E+L++PR       ++++AY++ +L  HPDK  G+        E+N+ +       
Sbjct: 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHA---LMQELNSLWGTFKTEV 66

Query: 83 TRNIYDTYG 91
               +  G
Sbjct: 67 YNLRMNLGG 75

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 71.5 bits (175), Expect = 4e-15
 Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 10/100 (10%)

Query: 16  CYALNVIAGKSYYEVLQVPRGA-------SDEQIKRAYRKLALKYHPDKNQGNEEANKRF 68
              +      ++YE+                 ++++ YR+L  ++HPD  Q   E   + 
Sbjct: 2   NALVQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSE---QS 58

Query: 69  AEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGGGRGGGM 108
           + +N AY  L D   R+ Y       +             
Sbjct: 59  STLNQAYHTLKDPLRRSQYMLKLLRNIDLTQEQTSNEVTT 98

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 63.5 bits (154), Expect = 5e-13
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)

Query: 8  LLFLLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE---A 64
          +  LL  +     + AG++ ++ + +    + EQ+K+ YRK  L  HP K  G      A
Sbjct: 18 IRALLSTMHTV--LWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYA 75

Query: 65 NKRFAEINNAYEVLSD 80
             F E+N+A+    +
Sbjct: 76 KMIFMELNDAWSEFEN 91

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 59.3 bits (144), Expect = 8e-12
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 27 YYEVLQVPRGA-SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETR 84
            ++L +     + +++K  +RK+ L  HPDK  G+        +IN A + L      
Sbjct: 16 ALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFL---ATKINEAKDFLEKRGIS 70

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 57.3 bits (138), Expect = 1e-10
 Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 7/63 (11%)

Query: 26  SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-------EEANKRFAEINNAYEVL 78
           S ++ + +        ++++Y++  L  HPDK Q           A K F  +  A++  
Sbjct: 41  SGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHF 100

Query: 79  SDS 81
           +  
Sbjct: 101 NTL 103

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 19/95 (20%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 248 TAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEV---RKF 304
           +  H  F   G+NL   + +   +A +G + T+  L        +  +T P      ++ 
Sbjct: 1   SNAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLK------ESILLTVPPGSQAGQRL 54

Query: 305 --GGEGMPLHFSNKKGDLYITFEVLFPTTLTEDQK 337
              G+G+        GDL+   +++ PT   E  +
Sbjct: 55  RIKGKGLVS--KTHTGDLFAVIKIVMPTKPDEKAR 87

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.94
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.92
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.9
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.87
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.87
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.86
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.85
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.85
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.85
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.84
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.83
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.83
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.83
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.83
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.83
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.8
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.8
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.78
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.75
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.73
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.72
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.71
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.71
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.71
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.69
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.68
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.68
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.66
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.63
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.63
2guz_A	71	Mitochondrial import inner membrane translocase su	99.62
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.6
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	99.31
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.09
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.04
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	98.98
2guz_B	65	Mitochondrial import inner membrane translocase su	98.86
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.8
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.79
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.72
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.68
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	98.56
1exk_A	79	DNAJ protein; extended beta-hairpin, CXXCXGXG, zin	97.68
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	92.92
3lcz_A	53	YCZA, inhibitor of trap, regulated by T-box (Trp)	92.72
2bx9_A	53	Anti-trap, AT, tryptophan RNA-binding attenuator p	87.09
3pmq_A	669	Decaheme cytochrome C MTRF; greek KEY, C type cyto	81.14

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=7.2e-69  Score=510.67  Aligned_cols=286  Identities=26%  Similarity=0.407  Sum_probs=159.5

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcC
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA  100 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~  100 (345)
                      .+..+|||++|||+++||.+|||+|||+||++||||+|+ +++|+++|++|++||++|+||.+|+.||+|+......+..
T Consensus        24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~  102 (329)
T 3lz8_A           24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFG  102 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcc
Confidence            344589999999999999999999999999999999998 4578899999999999999999999999985432111111


Q ss_pred             CC-C-CCCCc-ccChhhhhhhhcCCCCC-CCccccccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccc
Q 019162          101 GG-G-RGGGM-GVNIQDIFSSFFGGGPM-EEDEKIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRN  176 (345)
Q Consensus       101 ~~-~-~~~~~-~~~~~d~F~~~fg~~~~-~~~~~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G  176 (345)
                      ++ + .+++| +.++.|+|++|||++.. +..+..+++.|+.++|+|||+|+|+|+++++.+++.++|.         . 
T Consensus       103 ~~~~~~~~~f~~~~f~diF~~~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g---------~-  172 (329)
T 3lz8_A          103 RQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNV---------F-  172 (329)
T ss_dssp             ----------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCS---------C-
T ss_pred             cccccccCCcCCCchhhhhHhhhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeecC---------C-
Confidence            00 0 01122 12678999999986321 1123356899999999999999999999999998876432         1 


Q ss_pred             eEEEEEecCceEEEEeecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCC-CCCCCceEEEEEEEcCCCCcc
Q 019162          177 EVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       177 ~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~~h~~f~  255 (345)
                                              |...+...++++|+||||+++|++|+|+|+|++. .++.+|||+|+|+++||+.|+
T Consensus       173 ------------------------G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~  228 (329)
T 3lz8_A          173 ------------------------GMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFD  228 (329)
T ss_dssp             ------------------------C-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCE
T ss_pred             ------------------------eEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccE
Confidence                                    2222334678999999999999999999999996 467899999999999999999


Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCCCCHH
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTTLTED  335 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~l~~~  335 (345)
                      |+|+||+++++||++||++|++++|+||||+ +.|+||+++++|+++||+|+|||..  ..+|||||+|+|.||++||++
T Consensus       229 R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~~  305 (329)
T 3lz8_A          229 IVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEK  305 (329)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHH
T ss_pred             EcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCHH
Confidence            9999999999999999999999999999997 7999999999999999999999976  347999999999999999999


Q ss_pred             HHHHHHHHh
Q 019162          336 QKTRIKEVL  344 (345)
Q Consensus       336 q~~~l~~~l  344 (345)
                      |+++|+++.
T Consensus       306 q~~~l~~~~  314 (329)
T 3lz8_A          306 ARELWQQLA  314 (329)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999999874

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=1.3e-53  Score=391.67  Aligned_cols=211  Identities=29%  Similarity=0.541  Sum_probs=184.3

Q ss_pred             ccccCCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC----------cCCCccceE-EEEEecCceEEEEe-----
Q 019162          130 KIVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK----------RRCNCRNEV-YHKQIGPGMFQQMT-----  192 (345)
Q Consensus       130 ~~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~----------~~C~G~G~~-~~~~~~~g~~~~~~-----  192 (345)
                      ++++++|+++.|+|||||||+|+++++.+++.+.|+ |.|+          +.|+|+|.+ ..++.++ |+++.+     
T Consensus         7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~   85 (248)
T 1nlt_A            7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV   85 (248)
T ss_dssp             -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred             CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence            346799999999999999999999999999999999 9876          469999984 4556777 665544     


Q ss_pred             ----------ecccccccCceEEEecEEEEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCee
Q 019162          193 ----------EQVCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLH  262 (345)
Q Consensus       193 ----------~~~C~~C~G~g~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~  262 (345)
                                +++|+.|+|.|++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||+
T Consensus        86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~  165 (248)
T 1nlt_A           86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV  165 (248)
T ss_dssp             CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred             CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence                      7889999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             EEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCCC--CCHHHHH
Q 019162          263 TTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPTT--LTEDQKT  338 (345)
Q Consensus       263 ~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~~--l~~~q~~  338 (345)
                      ++++|||+||++|++++|+||||+.+.|++|++  +++|++++|+|+|||..+...+|||||+|+|.||++  ||++|++
T Consensus       166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~  245 (248)
T 1nlt_A          166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLK  245 (248)
T ss_dssp             EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC----------
T ss_pred             EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHH
Confidence            999999999999999999999998899999987  999999999999999865545799999999999999  9999999


Q ss_pred             HHH
Q 019162          339 RIK  341 (345)
Q Consensus       339 ~l~  341 (345)
                      +|+
T Consensus       246 ~l~  248 (248)
T 1nlt_A          246 KLE  248 (248)
T ss_dssp             ---
T ss_pred             hhC
Confidence            875

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=9.8e-49  Score=343.03  Aligned_cols=178  Identities=28%  Similarity=0.545  Sum_probs=165.4

Q ss_pred             CCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEE
Q 019162          134 GDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTV  213 (345)
Q Consensus       134 g~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V  213 (345)
                      ++|++++++|||||||+|+++++.+++                                  +|..|+|.|++.+.++++|
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~----------------------------------~c~~c~G~g~~~~~~~l~V   47 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISH----------------------------------KRLNPDGKSIRNEDKILTI   47 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEE----------------------------------EEECTTSSCEEEEEEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEec----------------------------------ccCCCCCceEEEEeEEEEE
Confidence            468999999999999999999998742                                  4889999999999999999


Q ss_pred             EecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162          214 DIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK  293 (345)
Q Consensus       214 ~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~  293 (345)
                      +||||+++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|++|
T Consensus        48 ~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~  127 (181)
T 3agx_A           48 EVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFK  127 (181)
T ss_dssp             EECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEEC
T ss_pred             EECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECC
Confidence            99999999999999999999889999999999999999999999999999999999999999999999999988999999


Q ss_pred             CcCCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019162          294 GITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVLG  345 (345)
Q Consensus       294 ~~~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l~  345 (345)
                      +++++|+++||+|+|||..+. ..+|||||+|+|.||++||++|+++|+++|.
T Consensus       128 ~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~~  180 (181)
T 3agx_A          128 DVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVLP  180 (181)
T ss_dssp             SCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHSC
T ss_pred             CccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhcc
Confidence            999999999999999998653 4469999999999999999999999999873

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-46  Score=329.57  Aligned_cols=176  Identities=36%  Similarity=0.564  Sum_probs=164.8

Q ss_pred             cCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEE
Q 019162          133 KGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVT  212 (345)
Q Consensus       133 kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~  212 (345)
                      +++|++++++|||||||+|+++++.+++.+.|+                                    .+++.+.++++
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~------------------------------------~g~~~~~~~l~   45 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIE------------------------------------HKVRNEENIVE   45 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEET------------------------------------TEEEEEEEEEE
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecC------------------------------------CceEEeeEEEE
Confidence            478999999999999999999999999998875                                    15677889999


Q ss_pred             EEecCCCCCCcEEEEeecCCC-CCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEE
Q 019162          213 VDIEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDIS  291 (345)
Q Consensus       213 V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~  291 (345)
                      |+||||+++|++|+|+|+|++ .+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|+
T Consensus        46 V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~  125 (180)
T 2q2g_A           46 VEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIP  125 (180)
T ss_dssp             EEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEE
T ss_pred             EEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEE
Confidence            999999999999999999999 7889999999999999999999999999999999999999999999999999889999


Q ss_pred             eCCcCCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019162          292 TKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTTLTEDQKTRIKEVL  344 (345)
Q Consensus       292 i~~~~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~~l  344 (345)
                      +|+++++|+++||+|+|||..++ ..+|||||+|+|.||++||++|+++|+++|
T Consensus       126 ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~  179 (180)
T 2q2g_A          126 IKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL  179 (180)
T ss_dssp             ECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred             CCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence            99999999999999999998654 446999999999999999999999999987

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=9.9e-44  Score=308.37  Aligned_cols=168  Identities=26%  Similarity=0.512  Sum_probs=153.8

Q ss_pred             CceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162          135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD  214 (345)
Q Consensus       135 ~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~  214 (345)
                      +|++++++|||+|||+|+++++.+++.  +                                    +.|.+ +.++++|+
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~--~------------------------------------~~G~~-~~~~l~V~   41 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--G------------------------------------PHGAS-EKTQIDIQ   41 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE--E------------------------------------TTTEE-EEEEEEEE
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEe--c------------------------------------CCCcE-EeEEEEEE
Confidence            478999999999999999999999765  1                                    01234 77899999


Q ss_pred             ecCCCCCCcEEEEeecCCC-CCCCCCceEEEEEEEcCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeC
Q 019162          215 IEKGMQDGQEVVFYEDGEP-KIDGEPGDLKFRIRTAPHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK  293 (345)
Q Consensus       215 Ip~G~~~G~~i~~~g~G~~-~~~~~~GDL~v~i~~~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~  293 (345)
                      ||||+++|++|+|+|+|++ .+++.+|||||+|+++||+.|+|+|+||+++++||++||++|++++|+|+||+.+.|++|
T Consensus        42 Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~  121 (170)
T 1c3g_A           42 LKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRV  121 (170)
T ss_dssp             CCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEES
T ss_pred             eCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECC
Confidence            9999999999999999995 688899999999999999999999999999999999999999999999999988999999


Q ss_pred             CcCCCCcEEEECCCCcCCCCCC-CCCcEEEEEEEECCCCCCHHHHHHHH
Q 019162          294 GITKPKEVRKFGGEGMPLHFSN-KKGDLYITFEVLFPTTLTEDQKTRIK  341 (345)
Q Consensus       294 ~~~~~g~~~ri~g~G~p~~~~~-~~GDL~v~~~v~~P~~l~~~q~~~l~  341 (345)
                      +++++|+++||+|+|||..++. .+|||||+|+|.||++||++|+++|+
T Consensus       122 ~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A          122 QPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID  170 (170)
T ss_dssp             SCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred             CccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence            9999999999999999986543 46999999999999999999998863

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.94  E-value=7.4e-27  Score=187.42  Aligned_cols=93  Identities=19%  Similarity=0.350  Sum_probs=87.3

Q ss_pred             cCCCCcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEEC
Q 019162          249 APHDRFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLF  328 (345)
Q Consensus       249 ~~h~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~  328 (345)
                      +||+.|+|+|+||+++++|||.||++|++++|+|+|| .+.|+||+++++|+++||+|+|||.. + .+|||||+|+|.|
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG-~~~v~ip~g~~~G~~~rl~G~G~p~~-~-~~GDL~v~~~V~~   78 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE-SILLTVPPGSQAGQRLRIKGKGLVSK-T-HTGDLFAVIKIVM   78 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS-CEEEEECTTCCTTCEEEETTCSCBCS-S-CBCCEEEEEEECC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC-CEEEeeCCCcCcCeEEEECCccCCCC-C-CCcCEEEEEEEEC
Confidence            6999999999999999999999999999999999999 58999999999999999999999984 3 5799999999999


Q ss_pred             CCCCCHHHHHHHHHHh
Q 019162          329 PTTLTEDQKTRIKEVL  344 (345)
Q Consensus       329 P~~l~~~q~~~l~~~l  344 (345)
                      |++||++|+++|++++
T Consensus        79 P~~Ls~~q~~~l~~l~   94 (109)
T 3i38_A           79 PTKPDEKARELWQQLA   94 (109)
T ss_dssp             CSSCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHH
Confidence            9999999999999986

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.92  E-value=4.3e-25  Score=180.50  Aligned_cols=93  Identities=26%  Similarity=0.496  Sum_probs=83.9

Q ss_pred             CcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCC
Q 019162          253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT  330 (345)
Q Consensus       253 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~  330 (345)
                      .|+|+|+||+++++|||.||++|++++|+|+||+.+.|++|++  +++|+++||+|+|||..+++.+|||||+|+|.||+
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~   80 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE   80 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence            4999999999999999999999999999999998899999988  99999999999999986554579999999999999


Q ss_pred             C--CCHHHHHHHHHHhC
Q 019162          331 T--LTEDQKTRIKEVLG  345 (345)
Q Consensus       331 ~--l~~~q~~~l~~~l~  345 (345)
                      +  ||++|+++|++++.
T Consensus        81 ~~~ls~~q~~~l~~l~~   97 (121)
T 1xao_A           81 NHFTSEENLKKLEEILP   97 (121)
T ss_dssp             TTCSCHHHHHHHHHHSC
T ss_pred             CCCCCHHHHHHHHHHcc
Confidence            9  99999999999873

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.90  E-value=9.7e-25  Score=173.64  Aligned_cols=97  Identities=49%  Similarity=0.976  Sum_probs=70.6

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccccCcCCC-
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAGG-  102 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~-  102 (345)
                      ..|||+||||+++||.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|++++..+..++ 
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~   81 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG   81 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence            5799999999999999999999999999999999986677889999999999999999999999999998876432111 


Q ss_pred             CCCCCcccChhhhhhhhcCC
Q 019162          103 GRGGGMGVNIQDIFSSFFGG  122 (345)
Q Consensus       103 ~~~~~~~~~~~d~F~~~fg~  122 (345)
                      ++++  +.++.++|++||++
T Consensus        82 ~~~~--~~~~~~~f~~~f~~   99 (103)
T 1bq0_A           82 GFGG--GADFSDIFGDVFGD   99 (103)
T ss_dssp             --------------------
T ss_pred             CCCC--CCCHHHHHHHHHHh
Confidence            1111  12556777777753

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=1.1e-22  Score=157.12  Aligned_cols=76  Identities=49%  Similarity=0.841  Sum_probs=70.8

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      +....|||+||||+++|+.++||+|||+|+++||||+++ ++++.++|++|++||++|+||.+|+.||.+|..++..
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   78 (88)
T 2ctr_A            3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTS   78 (88)
T ss_dssp             SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTC
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccc
Confidence            345689999999999999999999999999999999998 6788999999999999999999999999999887754

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.87  E-value=1.1e-22  Score=153.07  Aligned_cols=73  Identities=62%  Similarity=1.066  Sum_probs=68.2

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      +..|||+||||+++||.++||+|||+|+++||||+++ ++.+.+.|+.|++||++|+||.+|+.||++|++++.
T Consensus         1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~   73 (77)
T 1hdj_A            1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence            3579999999999999999999999999999999998 466889999999999999999999999999988764

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=1.4e-22  Score=153.42  Aligned_cols=74  Identities=46%  Similarity=0.814  Sum_probs=69.0

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      .....|||+||||+++|+.++||+|||+|+++||||++++++++.+.|++|++||++|+||.+|+.||++|..+
T Consensus         3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   76 (79)
T 2dn9_A            3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP   76 (79)
T ss_dssp             SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence            45568999999999999999999999999999999999877888999999999999999999999999998754

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.85  E-value=4.5e-22  Score=154.97  Aligned_cols=74  Identities=42%  Similarity=0.844  Sum_probs=68.2

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      +.+..|||+||||+++|+.++||+|||+|+++||||+++++.   ++|++|++||++|+||.+|+.||++|++++..
T Consensus         4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~   77 (92)
T 2o37_A            4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGLEAARS   77 (92)
T ss_dssp             CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred             cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence            456789999999999999999999999999999999998553   68999999999999999999999999988764

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.85  E-value=6.8e-22  Score=150.62  Aligned_cols=75  Identities=60%  Similarity=0.938  Sum_probs=68.2

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL   95 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   95 (345)
                      .....|||+||||+++|+.++||+|||+|+++||||+++++ +.+.++|++|++||++|+||.+|+.||.+|+.++
T Consensus         5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   80 (82)
T 2ej7_A            5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS   80 (82)
T ss_dssp             CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred             CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            34467999999999999999999999999999999999865 3688999999999999999999999999997654

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=6.1e-22  Score=154.20  Aligned_cols=76  Identities=54%  Similarity=0.836  Sum_probs=69.5

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      ....|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||.+|..++..
T Consensus         6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~   82 (92)
T 2dmx_A            6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA   82 (92)
T ss_dssp             CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred             CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            4457999999999999999999999999999999999855 468899999999999999999999999999877653

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=6.4e-22  Score=149.34  Aligned_cols=73  Identities=51%  Similarity=0.850  Sum_probs=67.9

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      .....|||+||||+++|+.++||+|||+|+++||||+++ .+.+.+.|++|++||++|+||.+|+.||++|+.+
T Consensus         3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~   75 (78)
T 2ctp_A            3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP   75 (78)
T ss_dssp             CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence            345689999999999999999999999999999999998 5778899999999999999999999999998754

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.84  E-value=1e-21  Score=155.00  Aligned_cols=70  Identities=40%  Similarity=0.674  Sum_probs=66.0

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      .+...|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~   82 (99)
T 2yua_A           13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRG   82 (99)
T ss_dssp             SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred             CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence            4566899999999999999999999999999999999987788999999999999999999999999984

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.83  E-value=1.8e-21  Score=145.02  Aligned_cols=70  Identities=53%  Similarity=0.905  Sum_probs=62.4

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE   93 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   93 (345)
                      +....|||+||||+++|+.++||+|||+|+++||||+++++   .+.|++|++||++|+||.+|+.||++|++
T Consensus         4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            44568999999999999999999999999999999999854   47899999999999999999999999863

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=7.7e-22  Score=159.17  Aligned_cols=76  Identities=30%  Similarity=0.487  Sum_probs=70.4

Q ss_pred             hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccc
Q 019162           20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL   95 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   95 (345)
                      .+....|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|..++
T Consensus        15 ~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~   90 (112)
T 2ctq_A           15 RSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM   90 (112)
T ss_dssp             CCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred             cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence            3455689999999999999999999999999999999998777899999999999999999999999999988765

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.83  E-value=1.8e-21  Score=156.27  Aligned_cols=76  Identities=54%  Similarity=0.892  Sum_probs=71.2

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      .....|||+||||+++|+.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||.+|..++.
T Consensus        13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            4556899999999999999999999999999999999997788999999999999999999999999999987764

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.83  E-value=2e-21  Score=150.04  Aligned_cols=73  Identities=47%  Similarity=0.735  Sum_probs=67.3

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      .....|||+||||+++|+.++||+|||+|+++||||+++ ++.+.+.|++|++||++|+||.+|..||.+|+.+
T Consensus        13 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           13 SALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             CSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             ccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            345679999999999999999999999999999999998 4678899999999999999999999999998753

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.83  E-value=2.3e-21  Score=152.78  Aligned_cols=73  Identities=60%  Similarity=1.008  Sum_probs=65.4

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      .|||+||||+++||.++||+|||+|+++||||+++++ ..+.+.|++|++||++|+||.+|+.||.+|.+++..
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~   75 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG   75 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence            6999999999999999999999999999999999855 458899999999999999999999999999877653

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.80  E-value=1.6e-20  Score=146.61  Aligned_cols=70  Identities=36%  Similarity=0.652  Sum_probs=64.2

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------HHHHHHHHHHHHHHHHhccccccccccccC
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEINNAYEVLSDSETRNIYDTYG   91 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g   91 (345)
                      ....|||+||||+++|+.+|||+|||+|+++||||+++.+      +.+.++|++|++||++|+||.+|+.||.+.
T Consensus        13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l   88 (94)
T 1wjz_A           13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence            4567999999999999999999999999999999998743      568899999999999999999999999864

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.80  E-value=2.5e-20  Score=165.81  Aligned_cols=73  Identities=49%  Similarity=0.870  Sum_probs=69.2

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      +|||++|||+++||.++||+|||+|+++||||++++++++.++|++|++||++|+||.+|+.||++|+.++..
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~   74 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED   74 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence            5899999999999999999999999999999999878889999999999999999999999999999887653

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.78  E-value=2.7e-20  Score=149.44  Aligned_cols=71  Identities=38%  Similarity=0.610  Sum_probs=65.6

Q ss_pred             cCCcccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC---cHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162           22 IAGKSYYEVLQVPRGA-SDEQIKRAYRKLALKYHPDKNQG---NEEANKRFAEINNAYEVLSDSETRNIYDTYGE   92 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~a-s~~eIk~ayr~la~~~hPd~~~~---~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   92 (345)
                      ....|||+||||+++| |.++||+|||+|+++||||++++   .+.+.+.|++|++||++|+||.+|+.||+++.
T Consensus        12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            4468999999999999 99999999999999999999985   35688999999999999999999999999875

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=4.6e-19  Score=137.25  Aligned_cols=63  Identities=32%  Similarity=0.477  Sum_probs=58.8

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccc
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNI   86 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~   86 (345)
                      ...|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+|+.+|+.
T Consensus        25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHHHHCCcccccC
Confidence            4689999999999999999999999999999999998 56688999999999999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.73  E-value=1e-18  Score=148.80  Aligned_cols=72  Identities=33%  Similarity=0.596  Sum_probs=64.8

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH------HHHHHHHHHHHHHHHhccccccccccccCc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE------EANKRFAEINNAYEVLSDSETRNIYDTYGE   92 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   92 (345)
                      .+..+|||+||||+++|+.++||+|||+|++++|||+++++.      .|.+.|++|++||++|+||.+|+.||..+.
T Consensus         6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            345679999999999999999999999999999999997542      367999999999999999999999998653

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.72  E-value=5e-19  Score=142.62  Aligned_cols=65  Identities=22%  Similarity=0.425  Sum_probs=60.9

Q ss_pred             CcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162           24 GKSYYEVLQVPRGASD--EQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE   92 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~--~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   92 (345)
                      ..+||+||||+++|+.  ++||+|||+|++++|||++++    .++|++|++||++|+||.+|+.||.+|.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999999999  999999999999999999984    3789999999999999999999999885

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.71  E-value=2.2e-18  Score=132.54  Aligned_cols=65  Identities=28%  Similarity=0.359  Sum_probs=58.6

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-HHHHHHHHHHHHHHHHhcccccccc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSETRNI   86 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~   86 (345)
                      ....++|+||||+++||.+|||+|||+|+++||||+++++ .+|.++|++|++||++|+|...|..
T Consensus        13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~   78 (88)
T 1iur_A           13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ   78 (88)
T ss_dssp             SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence            3447999999999999999999999999999999999866 4588999999999999999887743

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.71  E-value=4.8e-19  Score=152.33  Aligned_cols=67  Identities=21%  Similarity=0.379  Sum_probs=58.9

Q ss_pred             cCCcccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCc
Q 019162           22 IAGKSYYEVLQVPRGAS--DEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE   92 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as--~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   92 (345)
                      ....|||++|||+++|+  .+|||+|||++|+++|||++++.    ++|++|++||++|+||.+|+.||++|.
T Consensus         8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E            8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            34479999999999998  69999999999999999999742    789999999999999999999999996

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.71  E-value=3e-18  Score=129.32  Aligned_cols=66  Identities=23%  Similarity=0.408  Sum_probs=58.9

Q ss_pred             CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           24 GKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        24 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      ..++|+||||+++  ||.++||+|||+|+++||||+++ +   .++|++|++||++|+|+.+|.. +.||+.+
T Consensus        10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~   77 (79)
T 1faf_A           10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWGTFKTEVYNLR-MNLGGTG   77 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence            3689999999999  99999999999999999999987 3   3789999999999999999887 5577653

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.69  E-value=1.2e-17  Score=144.56  Aligned_cols=66  Identities=30%  Similarity=0.535  Sum_probs=60.4

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHH---HHHHHHHHHHHHHHhccccccccc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEE---ANKRFAEINNAYEVLSDSETRNIY   87 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~---a~~~f~~i~~Ay~~L~d~~~r~~y   87 (345)
                      +...|||++|||+++|+.++||+|||+++++||||++++...   |+++|++|++||++|+|+.+|+.|
T Consensus       114 ~~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          114 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CTTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cCccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            344799999999999999999999999999999999975543   889999999999999999999987

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.69  E-value=8.9e-18  Score=129.70  Aligned_cols=56  Identities=29%  Similarity=0.471  Sum_probs=52.1

Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHHHHHHHHhcc
Q 019162           25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE---EANKRFAEINNAYEVLSD   80 (345)
Q Consensus        25 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~---~a~~~f~~i~~Ay~~L~d   80 (345)
                      .++|++|||+++||.+|||+|||++|++||||+|++++   .|+++|++|++||++|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999998654   388999999999999975

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.68  E-value=3.2e-18  Score=152.06  Aligned_cols=79  Identities=18%  Similarity=0.270  Sum_probs=66.3

Q ss_pred             HHHHHHHhhhccCCcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccc
Q 019162           11 LLCALCYALNVIAGKSYYEVLQVPRG--ASDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSET   83 (345)
Q Consensus        11 ~~~~~~~~~~~~~~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~   83 (345)
                      |+..|....++....|||++|||+++  ++.++||+|||+|+++||||+++++.     .|.++|++|++||++|+||.+
T Consensus        29 fC~~c~~~q~~~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~  108 (207)
T 3bvo_A           29 FCPQCRALQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLS  108 (207)
T ss_dssp             BCTTTCCBCCCCTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             ccccccccCCCCCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence            34444444455557899999999996  79999999999999999999997542     266889999999999999999


Q ss_pred             cccccc
Q 019162           84 RNIYDT   89 (345)
Q Consensus        84 r~~yd~   89 (345)
                      |+.||.
T Consensus       109 R~~Yd~  114 (207)
T 3bvo_A          109 RGLYLL  114 (207)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999995

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.66  E-value=2.4e-17  Score=142.36  Aligned_cols=67  Identities=24%  Similarity=0.390  Sum_probs=61.0

Q ss_pred             cccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccccC
Q 019162           25 KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDTYG   91 (345)
Q Consensus        25 ~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g   91 (345)
                      .|||++|||++++  |.++||+|||+|+++||||++++.+     .|.++|+.|++||++|+||.+|+.||...
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            3899999999999  9999999999999999999998653     25689999999999999999999999753

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.63  E-value=1.4e-17  Score=175.09  Aligned_cols=78  Identities=46%  Similarity=0.791  Sum_probs=40.9

Q ss_pred             hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCcccccc
Q 019162           20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ   97 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   97 (345)
                      ......|||++|||+++||.+|||+|||+||++||||+++++++|.++|++|++||++|+||.+|+.||+||++++..
T Consensus        16 ~~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~   93 (780)
T 3apo_A           16 EGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED   93 (780)
T ss_dssp             -------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred             CCCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhccccccc
Confidence            345568999999999999999999999999999999999877889999999999999999999999999999987754

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.63  E-value=6.2e-17  Score=128.73  Aligned_cols=61  Identities=21%  Similarity=0.379  Sum_probs=53.4

Q ss_pred             ccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---cH----HHHHHHHHHHHHHHHhcccc
Q 019162           21 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG---NE----EANKRFAEINNAYEVLSDSE   82 (345)
Q Consensus        21 ~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~---~~----~a~~~f~~i~~Ay~~L~d~~   82 (345)
                      .+...|||++||++. ||.++||+|||++|++||||++++   ++    .|+++|++|++||++|+|+.
T Consensus        37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            344579999999996 999999999999999999999863   21    47899999999999999986

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.62  E-value=1.4e-16  Score=117.65  Aligned_cols=58  Identities=24%  Similarity=0.364  Sum_probs=52.3

Q ss_pred             CcccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccc
Q 019162           24 GKSYYEVLQVPR-GASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRN   85 (345)
Q Consensus        24 ~~~~y~iLgv~~-~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~   85 (345)
                      ..++|+||||++ +||.++||+|||+|+++||||+++ ++   +.|++|++||++|+++..|+
T Consensus        13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g-~~---~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG-SP---FLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC-CH---HHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CH---HHHHHHHHHHHHHhhhhhcC
Confidence            368999999999 799999999999999999999975 43   68999999999999987763

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.60  E-value=1.6e-16  Score=138.26  Aligned_cols=68  Identities=25%  Similarity=0.483  Sum_probs=60.4

Q ss_pred             hccCCccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           20 NVIAGKSYYEVL------QVPR-GASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        20 ~~~~~~~~y~iL------gv~~-~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      ......|||++|      |+++ +||.++||+|||+|+++||||++++   +.++|+.|++||++|+||.+|+.||..
T Consensus         6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~   80 (181)
T 3uo3_A            6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLK   80 (181)
T ss_dssp             -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence            345567999999      4665 9999999999999999999999985   568899999999999999999999973

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.31  E-value=2.2e-13  Score=107.97  Aligned_cols=79  Identities=14%  Similarity=0.120  Sum_probs=64.7

Q ss_pred             CCceeeeeehhheeeeccceEEEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEEE----------
Q 019162          134 GDDVIVELDATLEDLYMGGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQM----------  191 (345)
Q Consensus       134 g~di~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~----------  191 (345)
                      |.|+.+.|+|||||||+|.+++|.+++.+.|+ |.|+           +.|+|+|.+...+ |+  +++.          
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~-G~--~~~~~~C~~C~G~G   77 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT-GP--FVMRSTCRRCGGRG   77 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE-TT--EEEEEECSSSSSSS
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe-CC--EEEEEECCcCCCcc
Confidence            56889999999999999999999999999999 8774           4689999865444 44  3322          


Q ss_pred             --eecccccccCceEEEecEEEEEEe
Q 019162          192 --TEQVCDQCQNVKYEREGYFVTVDI  215 (345)
Q Consensus       192 --~~~~C~~C~G~g~~~~~~~~~V~I  215 (345)
                        .+++|+.|+|.|++.+.++|+|+|
T Consensus        78 ~~i~~~C~~C~G~G~v~~~k~l~V~~  103 (104)
T 2ctt_A           78 SIIISPCVVCRGAGQAKQKKRSGPSS  103 (104)
T ss_dssp             EECSSCCSSSSSCSEECCCCSSCCSC
T ss_pred             eECCCcCCCCCCeeEEEEEEEEEEEc
Confidence              167899999999999988888865

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.09  E-value=9.3e-11  Score=93.53  Aligned_cols=77  Identities=17%  Similarity=0.169  Sum_probs=64.4

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+.+++.|||.||+.|++++|..-                                               .. .
T Consensus         8 ~R~G~DL~~~~~Isl~eAl~G~~i~v~tl-----------------------------------------------dG-~   39 (109)
T 3i38_A            8 DIVGHNLEIVLPLAPWEAALGAKVTVPTL-----------------------------------------------KE-S   39 (109)
T ss_dssp             EEETTEEEEEEEECHHHHHHCEEEEECCS-----------------------------------------------SS-C
T ss_pred             EEECCEEEEEEEcCHHHHhCCCEEEEEcC-----------------------------------------------CC-C
Confidence            46799999999999999999998877531                                               11 4


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCCCccc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHDRFRR  256 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~~f~r  256 (345)
                      ++|+||+|+++|++++++|+|.+..+ .+|||||+++|.-......
T Consensus        40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~   84 (109)
T 3i38_A           40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDE   84 (109)
T ss_dssp             EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCH
T ss_pred             EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCH
Confidence            78999999999999999999998644 7899999999986655443

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.04  E-value=2.3e-10  Score=109.97  Aligned_cols=70  Identities=44%  Similarity=0.733  Sum_probs=58.5

Q ss_pred             hccCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---HHHHHHHHHHHHHHHHhccccccccccc
Q 019162           20 NVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EEANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        20 ~~~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      ......++|.+||+.++++.++|+++|+++++++|||+.+..   ..++++|++|++||++|+|+.+|..||+
T Consensus       377 ~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          377 KQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             HHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            334456999999999999999999999999999999999844   3488999999999999999999999995

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=98.98  E-value=2.6e-10  Score=92.68  Aligned_cols=80  Identities=23%  Similarity=0.315  Sum_probs=63.5

Q ss_pred             ccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEE
Q 019162          132 VKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFV  211 (345)
Q Consensus       132 ~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~  211 (345)
                      ++|.|+.+++.|||.||+.|++++|..-                                               ..+.+
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl-----------------------------------------------dG~~~   36 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV-----------------------------------------------SGDWL   36 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT-----------------------------------------------TSCEE
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC-----------------------------------------------CCCEE
Confidence            5799999999999999999998877530                                               23468


Q ss_pred             EEEecCC--CCCCcEEEEeecCCCCCCC-CCceEEEEEEEcCCCC--ccccc
Q 019162          212 TVDIEKG--MQDGQEVVFYEDGEPKIDG-EPGDLKFRIRTAPHDR--FRREG  258 (345)
Q Consensus       212 ~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDL~v~i~~~~h~~--f~r~g  258 (345)
                      +|+||+|  +++|++++++|+|.+..++ ..|||||++++.-...  +..+.
T Consensus        37 ~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q   88 (121)
T 1xao_A           37 KVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEEN   88 (121)
T ss_dssp             EEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHH
T ss_pred             EEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHH
Confidence            9999999  9999999999999985433 6899999999996554  54443

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.86  E-value=2e-09  Score=77.38  Aligned_cols=51  Identities=14%  Similarity=0.100  Sum_probs=45.4

Q ss_pred             ccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcc
Q 019162           26 SYYEVLQVPRG---ASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSD   80 (345)
Q Consensus        26 ~~y~iLgv~~~---as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d   80 (345)
                      +-|.||||+++   ++.++|+++||+|...+|||+.. ++   ....+|++|++.|..
T Consensus         5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGG-S~---yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGG-SF---YLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTC-CH---HHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHHHH
Confidence            45889999999   99999999999999999999986 44   667889999999864

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.80  E-value=1.1e-08  Score=88.03  Aligned_cols=73  Identities=15%  Similarity=0.134  Sum_probs=62.0

Q ss_pred             CCeeEEEEecHHHHhcCcEEEEEcC----CC----cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCC
Q 019162          259 NNLHTTVTVTLVQALVGFEKTIEHL----DE----HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT  330 (345)
Q Consensus       259 ~DL~~~~~Isl~eAl~G~~~~i~~l----dg----~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~  330 (345)
                      .|+.+++.|||.||+.|++++|...    +|    ++++|+||+++.+|+++|++|+|-+...+...|||||++++.-..
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~   80 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCC
Confidence            3899999999999999999888653    23    689999999999999999999998765555569999999997654


Q ss_pred             C
Q 019162          331 T  331 (345)
Q Consensus       331 ~  331 (345)
                      .
T Consensus        81 ~   81 (170)
T 1c3g_A           81 N   81 (170)
T ss_dssp             S
T ss_pred             c
Confidence            3

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.79  E-value=1.6e-08  Score=87.70  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=62.2

Q ss_pred             cCCeeEEEEecHHHHhcCcEEEEEcC-----------CCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEE
Q 019162          258 GNNLHTTVTVTLVQALVGFEKTIEHL-----------DEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEV  326 (345)
Q Consensus       258 g~DL~~~~~Isl~eAl~G~~~~i~~l-----------dg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v  326 (345)
                      |.|+.+++.|||.||+.|++++|...           ..++++|.||+++.+|+++|++|+|-+...+...|||||++++
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~   82 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQT   82 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEE
Confidence            78999999999999999999887643           2467899999999999999999999883334456999999999


Q ss_pred             ECCCCC
Q 019162          327 LFPTTL  332 (345)
Q Consensus       327 ~~P~~l  332 (345)
                      .-...+
T Consensus        83 ~~h~~F   88 (180)
T 2q2g_A           83 KTHPRF   88 (180)
T ss_dssp             CCCSSC
T ss_pred             EecccE
Confidence            755443

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.72  E-value=5e-08  Score=84.62  Aligned_cols=74  Identities=18%  Similarity=0.147  Sum_probs=59.2

Q ss_pred             cCCeeEEEEecHHHHhcCcEEEEEcC------CC-------cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEE
Q 019162          258 GNNLHTTVTVTLVQALVGFEKTIEHL------DE-------HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITF  324 (345)
Q Consensus       258 g~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~  324 (345)
                      +.|+.+++.|||.||+.|++++|...      .|       ++++|.||+++.+|+++|++|+|-+..+ +..|||||.+
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~-g~~GDl~v~i   80 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN-NIPADIVFVL   80 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS-SCCCCEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC-CCcccEEEEE
Confidence            57999999999999999999877532      34       5789999999999999999999998664 3469999999


Q ss_pred             EEECCCCC
Q 019162          325 EVLFPTTL  332 (345)
Q Consensus       325 ~v~~P~~l  332 (345)
                      ++.-...+
T Consensus        81 ~~~~h~~F   88 (181)
T 3agx_A           81 KDKPHNIF   88 (181)
T ss_dssp             EECCCSSC
T ss_pred             EEeccccc
Confidence            99765544

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.68  E-value=2.5e-08  Score=94.35  Aligned_cols=77  Identities=18%  Similarity=0.245  Sum_probs=61.5

Q ss_pred             ccccCCeeEEEEecHHHHhcCcEEEEEcC------C-------CcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEE
Q 019162          255 RREGNNLHTTVTVTLVQALVGFEKTIEHL------D-------EHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLY  321 (345)
Q Consensus       255 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------d-------g~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~  321 (345)
                      .+.|.||.+++.|+|.||+.|+++.|...      .       .++++|+||+++++|+++|++|+|.|..++...||||
T Consensus       137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~  216 (329)
T 3lz8_A          137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLW  216 (329)
T ss_dssp             CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEE
T ss_pred             cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEE
Confidence            35688999999999999999988766543      2       2468899999999999999999999976555579999


Q ss_pred             EEEEEECCCC
Q 019162          322 ITFEVLFPTT  331 (345)
Q Consensus       322 v~~~v~~P~~  331 (345)
                      |+|+|.-...
T Consensus       217 v~I~v~~h~~  226 (329)
T 3lz8_A          217 LVIHIAPHPL  226 (329)
T ss_dssp             EEECCCCCSS
T ss_pred             EEEEEecCCc
Confidence            9998876543

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=98.56  E-value=4.3e-08  Score=89.28  Aligned_cols=76  Identities=24%  Similarity=0.373  Sum_probs=63.5

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+++++.|||.||+.|.+++|..-                                               ..+.
T Consensus       158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl-----------------------------------------------dG~~  190 (248)
T 1nlt_A          158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV-----------------------------------------------SGDW  190 (248)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCBCCEEECS-----------------------------------------------SSCE
T ss_pred             eeeCCEEEEEEEeCHHHHhcCCEEEEeCC-----------------------------------------------CCCE
Confidence            46799999999999999999998888541                                               3346


Q ss_pred             EEEEecCC--CCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCCC
Q 019162          211 VTVDIEKG--MQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHDR  253 (345)
Q Consensus       211 ~~V~Ip~G--~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~~  253 (345)
                      ++|+||+|  +++|++++++|+|.+..+ ...|||||+++|.-...
T Consensus       191 ~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~  236 (248)
T 1nlt_A          191 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPEN  236 (248)
T ss_dssp             EECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-
T ss_pred             EEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCC
Confidence            89999999  999999999999998533 26799999999985543

>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1

Probab=97.68  E-value=2e-05  Score=58.54  Aligned_cols=49  Identities=22%  Similarity=0.371  Sum_probs=32.0

Q ss_pred             cceEEEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEEEeecccccccCceE
Q 019162          151 GGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKY  204 (345)
Q Consensus       151 G~~~~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~  204 (345)
                      |++++|.+++.+.|+ |.|+           +.|+|+|.+...+   |+++.  ..+|+.|+|.|.
T Consensus         1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~---g~~~~--~~~C~~C~G~G~   61 (79)
T 1exk_A            1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ---GFFAV--QQTCPHCQGRGT   61 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE---TTEEE--EEECTTTTTSSE
T ss_pred             CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc---CCCEE--eeECcCCCCccE
Confidence            567788889999998 8764           4689999865544   44442  223444444443

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=92.92  E-value=0.1  Score=53.34  Aligned_cols=57  Identities=16%  Similarity=0.100  Sum_probs=43.8

Q ss_pred             HHHHHhhhccCCcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHH
Q 019162           13 CALCYALNVIAGKSYYEVLQVPRGASD--EQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEV   77 (345)
Q Consensus        13 ~~~~~~~~~~~~~~~y~iLgv~~~as~--~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~   77 (345)
                      ......|.....+|||.+||++.++..  .+|++|||++|+..+++        .+++..|..|+.|
T Consensus       617 l~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          617 LGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMANKV  675 (681)
T ss_dssp             HHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhccc
Confidence            333455566667789999999776655  77999999999975444        3789999999886

>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A

Probab=92.72  E-value=0.043  Score=37.23  Aligned_cols=25  Identities=16%  Similarity=0.311  Sum_probs=19.6

Q ss_pred             CCCccceEEEEEecCceEEEEeecccccccCceEEEec
Q 019162          171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREG  208 (345)
Q Consensus       171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~  208 (345)
                      .|+|+|.+.             .++|+.|+|.|++.+.
T Consensus        14 ~C~GsG~~i-------------~~~C~~C~G~G~v~~~   38 (53)
T 3lcz_A           14 NCNGSGREE-------------PEPCPKCLGKGVILTA   38 (53)
T ss_dssp             TTTTSCEET-------------TEECTTTTTSSEEECH
T ss_pred             CCcccccCC-------------CCcCCCCCCcEEEEEE
Confidence            688888742             4679999999988764

>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*

Probab=87.09  E-value=0.32  Score=32.83  Aligned_cols=24  Identities=17%  Similarity=0.389  Sum_probs=18.5

Q ss_pred             CCCccceEEEEEecCceEEEEeecccccccCceEEEe
Q 019162          171 RCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYERE  207 (345)
Q Consensus       171 ~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~  207 (345)
                      .|+|+|.+.             ..+|+.|+|.|.+..
T Consensus        14 ~C~GsG~~~-------------~~~C~~C~G~G~v~~   37 (53)
T 2bx9_A           14 KCERAGEIE-------------GTPCPACSGKGVILT   37 (53)
T ss_dssp             TTTTSSEET-------------TEECTTTTTSSEEEC
T ss_pred             CCcceeccC-------------CCCCccCCCCccEEE
Confidence            688888742             357999999998765

>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}

Probab=81.14  E-value=0.13  Score=52.56  Aligned_cols=31  Identities=3%  Similarity=-0.338  Sum_probs=28.1

Q ss_pred             eeeeehhheeeeccceEEEEEEeeeeeC-CCC
Q 019162          138 IVELDATLEDLYMGGSLKVWREKNVIKP-APG  168 (345)
Q Consensus       138 ~~~l~itlee~~~G~~~~v~~~r~~~c~-c~g  168 (345)
                      .+++.|+|+|++.|.++++.+.+...|. |+|
T Consensus       168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHG  199 (669)
T 3pmq_A          168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHS  199 (669)
T ss_dssp             SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHS
T ss_pred             eEEEEEEhHHhhCCCceEEEeccCCcCCCCCC
Confidence            4788999999999999999999999998 754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	345
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	6e-24
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-21
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-20
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	3e-20
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	5e-20
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	2e-18
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	5e-17
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	3e-16
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	9e-16
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-15
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	1e-08
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	0.003
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	6e-08

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 91.2 bits (226), Expect = 6e-24
 Identities = 38/75 (50%), Positives = 55/75 (73%)

Query: 23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          A + YYE+L V + A + +I++AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+DS+
Sbjct: 1  AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQ 60

Query: 83 TRNIYDTYGEEGLKQ 97
           R  YD YG    +Q
Sbjct: 61 KRAAYDQYGHAAFEQ 75

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 84.2 bits (208), Expect = 5e-21
 Identities = 25/85 (29%), Positives = 53/85 (62%), Gaps = 1/85 (1%)

Query: 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMP-LH 312
           F+R+G++L  T+ ++  ++L+GF KTI+ +D   + +S     +P +   + G+GMP   
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 313 FSNKKGDLYITFEVLFPTTLTEDQK 337
             +++G+L + ++V +P +L + QK
Sbjct: 62  NPSQRGNLIVKYKVDYPISLNDAQK 86

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 82.3 bits (203), Expect = 2e-20
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 11 LLCALCYALNVIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN---EEANKR 67
          LL  +   L   AG++ ++ + +    + EQ+K+ YRK  L  HPDK  G    + A   
Sbjct: 21 LLSTMHTVL--WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMI 78

Query: 68 FAEINNAYEVLSDSETRNIY 87
          F E+N+A+    +   + +Y
Sbjct: 79 FMELNDAWSEFENQGQKPLY 98

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 3e-20
 Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 5/80 (6%)

Query: 24  GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSET 83
           GK YY+ L + RGASDE+IKRAYR+ AL+YHPDKN+    A ++F EI  AY+VLSD   
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRK 60

Query: 84  RNIYDTYGEEGLKQHAAGGG 103
           R I+D YGEEGLK    G G
Sbjct: 61  REIFDRYGEEGLK----GSG 76

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 81.6 bits (201), Expect = 5e-20
 Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%)

Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKR------FAEINNAYEVL 78
          K +Y +L     A+   +K+ Y+KL L YHPDK   +  A         F EI+ A+++L
Sbjct: 16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75

Query: 79 SDSETRNIYDTYG 91
           + ET+  YD   
Sbjct: 76 GNEETKKKYDLQR 88

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.5 bits (188), Expect = 2e-18
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)

Query: 254 FRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTK--GITKPKEVRKFGGEGMPL 311
           F+R+G++L     + L+ A+ G E  +EH+    + +      +  P   +   G+GMP+
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 312 HFSNKKGDLYITFEVLFP 329
                 G+L I F +  P
Sbjct: 62  PKYGGYGNLIIKFTIKDP 79

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 72.8 bits (178), Expect = 5e-17
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 7/69 (10%)

Query: 27 YYEVLQVPRGAS--DEQIKRAYRKLALKYHPDKNQGNEEANK-----RFAEINNAYEVLS 79
          Y+ +  +P       + +   ++ L  +YHPDK     +A +     + A IN A++ L 
Sbjct: 3  YFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLR 62

Query: 80 DSETRNIYD 88
              R  Y 
Sbjct: 63 HPLMRAEYL 71

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 3e-16
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 25 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN-EEANKRFAEINNAYEVLSDSET 83
          K    V++      + + K+  R+L LK+HPDKN  N + AN+ F  + N    L     
Sbjct: 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK--- 72

Query: 84 RNIYDTYGEEGLKQ 97
          +   D   +   ++
Sbjct: 73 QAFLDQNADRASRR 86

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 69.3 bits (169), Expect = 9e-16
 Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 25 KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
          +   E+L++PR       ++++AY++ +L  HPDK      ++    E+N+ +       
Sbjct: 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG----SHALMQELNSLWGTFKTEV 66

Query: 83 TRNIYDTYG 91
               +  G
Sbjct: 67 YNLRMNLGG 75

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 70.2 bits (171), Expect = 1e-15
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 12/106 (11%)

Query: 25  KSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSE 82
               ++L + R A  +   +++AY K   ++HPDK        ++  ++N  Y+ + D  
Sbjct: 8   LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGV 63

Query: 83  TRNIYDTYGEEGLKQHAAGGGRGGGM----GVNIQDIFSS--FFGG 122
                  +G           G           N +++F S      
Sbjct: 64  KYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSS 109

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.9 bits (116), Expect = 1e-08
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 198 QCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPH 251
           + +  K       + V +E GM+DGQ +VF  + +   D  PGD+ F +   PH
Sbjct: 20  KGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPH 73

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 256 REGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSN 315
           + G ++   ++ +L +   G    +  L+  ++++  +   K  +   F GE        
Sbjct: 2   QRGKDIKHEISASLEELYKGRTAKL-ALNRKILEVHVEPGMKDGQRIVFKGEADQ-APDV 59

Query: 316 KKGDLYITFEV 326
             GD+      
Sbjct: 60  IPGDVVFIVSE 70

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (112), Expect = 6e-08
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 40/118 (33%)

Query: 135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQ 194
           + V V L  +LEDL++G                                           
Sbjct: 1   ETVQVNLPVSLEDLFVGKKKSF-------------------------------------- 22

Query: 195 VCDQCQNVKYEREGYFVTVDIEKGMQDGQEVVFYEDGEPKI-DGEPGDLKFRIRTAPH 251
                +      E   + + ++ G + G ++ +   G+     G    L+F I+   H
Sbjct: 23  -KIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSH 79

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	345
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.91
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.91
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.86
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.82
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.81
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.77
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.76
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.71
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.69
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.67
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.65
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.4
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.98
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	98.97
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.92
d1exka_	79	Cysteine-rich domain of the chaperone protein DnaJ	97.86
d1nlta3	74	Mitochondrial protein import protein mas5 (Hsp40,	97.84

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.8e-25  Score=171.59  Aligned_cols=89  Identities=29%  Similarity=0.633  Sum_probs=83.7

Q ss_pred             CcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEECCCC
Q 019162          253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFS-NKKGDLYITFEVLFPTT  331 (345)
Q Consensus       253 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~  331 (345)
                      .|+|+|+||+++++||+.||++|++++|+|+||+.+.+++|+++++|++++|+|+|||.... +.+|||||+|+|.+|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            49999999999999999999999999999999999999999999999999999999998654 44699999999999999


Q ss_pred             CCHHHHHHHH
Q 019162          332 LTEDQKTRIK  341 (345)
Q Consensus       332 l~~~q~~~l~  341 (345)
                      ||++|+++|+
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999874

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=3.6e-25  Score=163.98  Aligned_cols=73  Identities=49%  Similarity=0.971  Sum_probs=68.8

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      .+|||+||||+++||.+|||+|||+++++||||++++++.+.+.|+.|++||+||+||.+|+.||+||..++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            5799999999999999999999999999999999987788889999999999999999999999999987653

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6e-24  Score=158.21  Aligned_cols=73  Identities=62%  Similarity=1.066  Sum_probs=68.9

Q ss_pred             CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccccc
Q 019162           23 AGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK   96 (345)
Q Consensus        23 ~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   96 (345)
                      +++|||+||||+++||.++|++||+++++++|||+++ ++++.+.|+.|++||+||+||.+|+.||++|+++++
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~   73 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK   73 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhc
Confidence            4689999999999999999999999999999999997 667889999999999999999999999999999874

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=4e-22  Score=149.34  Aligned_cols=78  Identities=26%  Similarity=0.451  Sum_probs=73.3

Q ss_pred             CcccccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCc--CCCCcEEEECCCCcCCCCCCCCCcEEEEEEEECCC
Q 019162          253 RFRREGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGI--TKPKEVRKFGGEGMPLHFSNKKGDLYITFEVLFPT  330 (345)
Q Consensus       253 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~--~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~~P~  330 (345)
                      .|+|+|+||+++++||+.||++|++++|+|+||+.+.+++++.  +++|++++|+|+|||..+.+.+|||||+|+|.+|+
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~~Pk   80 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPE   80 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEEcCC
Confidence            4999999999999999999999999999999999888888754  99999999999999998877789999999999996

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=2.2e-21  Score=149.44  Aligned_cols=70  Identities=36%  Similarity=0.652  Sum_probs=63.7

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc------HHHHHHHHHHHHHHHHhccccccccccccC
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN------EEANKRFAEINNAYEVLSDSETRNIYDTYG   91 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g   91 (345)
                      .+.+|||+||||+++|+.+|||+||++|+++||||+++.+      ++++++|+.|++||++|+||.+|+.||...
T Consensus        13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            4568999999999999999999999999999999998754      457899999999999999999999999753

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.81  E-value=2.3e-21  Score=154.89  Aligned_cols=67  Identities=22%  Similarity=0.388  Sum_probs=61.4

Q ss_pred             CcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhccccccccccccCccc
Q 019162           24 GKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEG   94 (345)
Q Consensus        24 ~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   94 (345)
                      ..|||+||||+++|  +.++||+|||+||++||||++++ +   ++|++|++||+||+|+.+|+.||.+|...
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~-~---e~F~~I~~AY~vLsd~~kR~~YD~~~~~~   75 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-E---EKMKKMNTLYKKMEDGVKYAHQPDFGGFW   75 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-T---TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh-H---HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence            46999999999999  78899999999999999999984 3   67999999999999999999999988654

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.77  E-value=4e-19  Score=130.66  Aligned_cols=74  Identities=35%  Similarity=0.609  Sum_probs=68.7

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      ++++.|++++++|||+|||+|+++++.+                                                ..+.
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~------------------------------------------------~~~~   32 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLAL------------------------------------------------NRKI   32 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEE------------------------------------------------EEEE
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceee------------------------------------------------cCcc
Confidence            3679999999999999999999999976                                                3467


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCCCCCCCceEEEEEEEcCCC
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPKIDGEPGDLKFRIRTAPHD  252 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDL~v~i~~~~h~  252 (345)
                      ++|+||+|+++|++|+|+|+|++.+++.+|||+|+|+++||+
T Consensus        33 ~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~i~~~pHk   74 (74)
T d1nlta1          33 LEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHK   74 (74)
T ss_dssp             EEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCS
T ss_pred             EEEEecccccCCeEEEecCCcCCCCCCCCCCEEEEEEecCCC
Confidence            999999999999999999999998899999999999999995

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=7.5e-19  Score=131.24  Aligned_cols=79  Identities=22%  Similarity=0.411  Sum_probs=68.3

Q ss_pred             CceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEEEEEE
Q 019162          135 DDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYFVTVD  214 (345)
Q Consensus       135 ~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~~~V~  214 (345)
                      ++++++|+|||||+|+|+++++.+.|.                                    .|.|.+   +.++++|.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~------------------------------------~~~g~~---~~~~~~v~   41 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRK------------------------------------GPHGAS---EKTQIDIQ   41 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEE------------------------------------ETTTEE---EEEEEEEE
T ss_pred             CCEEEEeEEEHHHHhCCCceEeeccee------------------------------------cccCCC---ceEEEEEE
Confidence            478999999999999999999998643                                    233322   56789999


Q ss_pred             ecCCCCCCcEEEEeecCCCCCC-CCCceEEEEEEEcCCC
Q 019162          215 IEKGMQDGQEVVFYEDGEPKID-GEPGDLKFRIRTAPHD  252 (345)
Q Consensus       215 Ip~G~~~G~~i~~~g~G~~~~~-~~~GDL~v~i~~~~h~  252 (345)
                      ||||+++|++|+|+|+|++.++ +.+|||+|+|+++|||
T Consensus        42 Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~~HP   80 (80)
T d1c3ga1          42 LKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHP   80 (80)
T ss_dssp             CCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCS
T ss_pred             ECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeCCCC
Confidence            9999999999999999999664 6799999999999997

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.71  E-value=1.4e-18  Score=128.67  Aligned_cols=64  Identities=20%  Similarity=0.338  Sum_probs=58.5

Q ss_pred             CCcccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHhcccccccccccc
Q 019162           23 AGKSYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTY   90 (345)
Q Consensus        23 ~~~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~   90 (345)
                      ...+||+||||++++  +.++||+|||+++++||||+++ ++   ++|++|++||++|+|+.+|..||.-
T Consensus         9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g-~~---e~~~~in~Ay~~L~d~~~r~~~~~~   74 (79)
T d1fafa_           9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-SH---ALMQELNSLWGTFKTEVYNLRMNLG   74 (79)
T ss_dssp             HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-CH---HHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC-CH---HHHHHHHHHHHHHCCHHHHHHHccC
Confidence            346899999999988  9999999999999999999986 43   6899999999999999999999964

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=3.9e-18  Score=126.03  Aligned_cols=64  Identities=25%  Similarity=0.448  Sum_probs=56.9

Q ss_pred             ccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcH-----HHHHHHHHHHHHHHHhccccccccccc
Q 019162           26 SYYEVLQVPRGA--SDEQIKRAYRKLALKYHPDKNQGNE-----EANKRFAEINNAYEVLSDSETRNIYDT   89 (345)
Q Consensus        26 ~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~-----~a~~~f~~i~~Ay~~L~d~~~r~~yd~   89 (345)
                      |||++|||++++  +.++||+|||+++++||||++.+..     .+.+.|+.|++||++|+||.+|+.|+.
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            899999999955  5899999999999999999976432     367889999999999999999999974

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=7.5e-18  Score=127.39  Aligned_cols=67  Identities=28%  Similarity=0.414  Sum_probs=58.9

Q ss_pred             CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH-HHHHHHHHHHHHHHHhccccccccccccCcc
Q 019162           24 GKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE-EANKRFAEINNAYEVLSDSETRNIYDTYGEE   93 (345)
Q Consensus        24 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   93 (345)
                      -+++|+||+|+.+||.+|||+|||+|+++||||+++++. .|.++|+.|++||++|++   +..||++.+.
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~~   82 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNADR   82 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSSC
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccchH
Confidence            369999999999999999999999999999999998765 589999999999999974   5667765543

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.65  E-value=2.2e-17  Score=127.58  Aligned_cols=66  Identities=30%  Similarity=0.535  Sum_probs=59.6

Q ss_pred             cCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcH---HHHHHHHHHHHHHHHhccccccccc
Q 019162           22 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNE---EANKRFAEINNAYEVLSDSETRNIY   87 (345)
Q Consensus        22 ~~~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~---~a~~~f~~i~~Ay~~L~d~~~r~~y   87 (345)
                      +...++|++||++..+|.++||+|||++++.+|||+++++.   .|.+.|+.|++||++|+||.+|+.|
T Consensus        30 ~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          30 WAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             CCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            34568899999999999999999999999999999987442   3788999999999999999999988

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.40  E-value=3.9e-13  Score=98.09  Aligned_cols=70  Identities=13%  Similarity=0.173  Sum_probs=63.2

Q ss_pred             cccCCeeEEEEecHHHHhcCcEEEEEcCCCcEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEE
Q 019162          256 REGNNLHTTVTVTLVQALVGFEKTIEHLDEHLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL  327 (345)
Q Consensus       256 r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~  327 (345)
                      |+|.|++++++|||.||++|+++.|.+.. +.+.|+||+++++|+++|++|+|.+..+. ..|||+|++++.
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~-~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~-~~GDl~v~i~~~   71 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNR-KILEVHVEPGMKDGQRIVFKGEADQAPDV-IPGDVVFIVSER   71 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEE-EEEEEEECTTCCTTCEEEETTCSCCCTTC-BCCCEEEEEEEC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecC-ccEEEEecccccCCeEEEecCCcCCCCCC-CCCCEEEEEEec
Confidence            67999999999999999999999999754 47999999999999999999999987643 469999999975

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=2.3e-10  Score=86.26  Aligned_cols=78  Identities=18%  Similarity=0.253  Sum_probs=64.9

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+.++++|||.||+.|+++++..                                               ...+.
T Consensus         3 ~R~G~DL~~~~~I~~~eal~G~~~~i~~-----------------------------------------------~dG~~   35 (90)
T d1c3ga2           3 KRDGDDLIYTLPLSFKESLLGFSKTIQT-----------------------------------------------IDGRT   35 (90)
T ss_dssp             EEETTEEEEEECCBHHHHHHCEEEEEEC-----------------------------------------------SSSCE
T ss_pred             eEeCCeEEEEEEeCHHHHhcCCeEEEec-----------------------------------------------ccccc
Confidence            3679999999999999999999988853                                               13467


Q ss_pred             EEEEecCCCCCCcEEEEeecCCCC--CCCCCceEEEEEEEcCCCCcc
Q 019162          211 VTVDIEKGMQDGQEVVFYEDGEPK--IDGEPGDLKFRIRTAPHDRFR  255 (345)
Q Consensus       211 ~~V~Ip~G~~~G~~i~~~g~G~~~--~~~~~GDL~v~i~~~~h~~f~  255 (345)
                      ++|+||+|+++|++++++|+|.+.  ..+..|||+|++++.-.....
T Consensus        36 i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~ls   82 (90)
T d1c3ga2          36 LPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLN   82 (90)
T ss_dssp             EEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCC
T ss_pred             eecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCCCC
Confidence            899999999999999999999874  345689999999998443343

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=8.7e-10  Score=81.11  Aligned_cols=69  Identities=16%  Similarity=0.171  Sum_probs=58.3

Q ss_pred             CCeeEEEEecHHHHhcCcEEEEE----cCCC----cEEEEEeCCcCCCCcEEEECCCCcCCCCCCCCCcEEEEEEEE
Q 019162          259 NNLHTTVTVTLVQALVGFEKTIE----HLDE----HLVDISTKGITKPKEVRKFGGEGMPLHFSNKKGDLYITFEVL  327 (345)
Q Consensus       259 ~DL~~~~~Isl~eAl~G~~~~i~----~ldg----~~i~v~i~~~~~~g~~~ri~g~G~p~~~~~~~GDL~v~~~v~  327 (345)
                      +|+.+.+.|||.||+.|+++.|.    ..+|    +++.|.||+++.+|++++++|+|....+....|||+|.+++.
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~   77 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEK   77 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEEC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeC
Confidence            57899999999999999977664    3344    368899999999999999999999876655569999999875

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.92  E-value=3.5e-10  Score=83.31  Aligned_cols=72  Identities=25%  Similarity=0.375  Sum_probs=60.9

Q ss_pred             cccCCceeeeeehhheeeeccceEEEEEEeeeeeCCCCCcCCCccceEEEEEecCceEEEEeecccccccCceEEEecEE
Q 019162          131 IVKGDDVIVELDATLEDLYMGGSLKVWREKNVIKPAPGKRRCNCRNEVYHKQIGPGMFQQMTEQVCDQCQNVKYEREGYF  210 (345)
Q Consensus       131 ~~kg~di~~~l~itlee~~~G~~~~v~~~r~~~c~c~g~~~C~G~G~~~~~~~~~g~~~~~~~~~C~~C~G~g~~~~~~~  210 (345)
                      .++|.|+.++++|||.||+.|+++++..-                                               ....
T Consensus         3 ~R~G~dL~~~~~I~~~eal~G~~~~i~~~-----------------------------------------------dg~~   35 (80)
T d1nlta2           3 KRDGDDLVYEAEIDLLTAIAGGEFALEHV-----------------------------------------------SGDW   35 (80)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCBCCEEECS-----------------------------------------------SSCE
T ss_pred             EEeCCEEEEEEEeCHHHHhCCCEEEEEec-----------------------------------------------Ccce
Confidence            36799999999999999999999888641                                               3456


Q ss_pred             EEEEecCC--CCCCcEEEEeecCCCC-CCCCCceEEEEEEEc
Q 019162          211 VTVDIEKG--MQDGQEVVFYEDGEPK-IDGEPGDLKFRIRTA  249 (345)
Q Consensus       211 ~~V~Ip~G--~~~G~~i~~~g~G~~~-~~~~~GDL~v~i~~~  249 (345)
                      ++|.||++  +++|++++++|+|.+. .++..|||+|++++.
T Consensus        36 ~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v~~~V~   77 (80)
T d1nlta2          36 LKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIK   77 (80)
T ss_dssp             EECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEE
T ss_pred             EEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEEEEEEEE
Confidence            78888877  9999999999999974 345689999999986

>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Cysteine-rich domain of the chaperone protein DnaJ
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=2.2e-06  Score=62.21  Aligned_cols=56  Identities=18%  Similarity=0.252  Sum_probs=37.1

Q ss_pred             cceEEEEEEeeeeeC-CCCC-----------cCCCccceEEEEEecCceEEE----------EeecccccccCceEEEe
Q 019162          151 GGSLKVWREKNVIKP-APGK-----------RRCNCRNEVYHKQIGPGMFQQ----------MTEQVCDQCQNVKYERE  207 (345)
Q Consensus       151 G~~~~v~~~r~~~c~-c~g~-----------~~C~G~G~~~~~~~~~g~~~~----------~~~~~C~~C~G~g~~~~  207 (345)
                      |++++|.+++.+.|+ |.|+           +.|+|+|++.... ++.++++          +..++|+.|+|.|++++
T Consensus         1 G~~k~i~i~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~-g~~~~~~~C~~C~G~G~~i~~~C~~C~G~G~v~k   78 (79)
T d1exka_           1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ-GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVER   78 (79)
T ss_dssp             CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE-TTEEEEEECTTTTTSSEECSSBCGGGTTSSEEEC
T ss_pred             CceEEEEeeeeccCCCCcCcccCCCccceeCCCccceeEEEEec-ccceeeEECcccCcceeECCCCCCCCCCceEeec
Confidence            678899999999999 8764           5789999864432 3322222          11556666666666654

>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: DnaJ/Hsp40 cysteine-rich domain
superfamily: DnaJ/Hsp40 cysteine-rich domain
family: DnaJ/Hsp40 cysteine-rich domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.84  E-value=1.1e-05  Score=57.47  Aligned_cols=47  Identities=26%  Similarity=0.517  Sum_probs=30.3

Q ss_pred             eeeeeC-CCCC----------cCCCccceE-EEEEecCceEEEEe--------------ecccccccCceEEE
Q 019162          160 KNVIKP-APGK----------RRCNCRNEV-YHKQIGPGMFQQMT--------------EQVCDQCQNVKYER  206 (345)
Q Consensus       160 r~~~c~-c~g~----------~~C~G~G~~-~~~~~~~g~~~~~~--------------~~~C~~C~G~g~~~  206 (345)
                      |+++|+ |.|+          +.|+|+|.+ ...+++++++++..              +++|+.|+|.|+++
T Consensus         1 r~v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~   73 (74)
T d1nlta3           1 KQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDRCKSCNGKKVEN   73 (74)
T ss_dssp             EEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCCTTSBCSSSTTSCEEE
T ss_pred             CccCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecCcEEEEEEECccCccceEEeCCCCCCCCCCCeeEeC
Confidence            578898 8765          578999985 45567775544322              34566666666554