Citrus Sinensis ID: 019226
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | 2.2.26 [Sep-21-2011] | |||||||
| P40119 | 254 | Protein CbbY, chromosomal | yes | no | 0.613 | 0.830 | 0.281 | 6e-25 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | yes | no | 0.616 | 0.933 | 0.332 | 9e-25 | |
| Q04541 | 254 | Protein CbbY, plasmid OS= | yes | no | 0.622 | 0.842 | 0.292 | 2e-24 | |
| P95649 | 230 | Protein CbbY OS=Rhodobact | yes | no | 0.598 | 0.895 | 0.285 | 2e-21 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.558 | 0.872 | 0.267 | 2e-11 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.508 | 0.930 | 0.240 | 2e-09 | |
| P77366 | 219 | Beta-phosphoglucomutase O | N/A | no | 0.558 | 0.876 | 0.247 | 5e-07 | |
| O06995 | 226 | Beta-phosphoglucomutase O | no | no | 0.531 | 0.809 | 0.245 | 2e-06 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.543 | 0.865 | 0.238 | 8e-06 | |
| P65070 | 262 | Uncharacterized protein M | yes | no | 0.627 | 0.824 | 0.229 | 9e-06 |
| >sp|P40119|CBBYC_CUPNH Protein CbbY, chromosomal OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYC PE=3 SV=3 | Back alignment and function desciption |
|---|
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 59/270 (21%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+QALIFD DG + ++E H QA+N AF+ + WD Y L ++ GGK
Sbjct: 1 MQALIFDVDGTLADTESAHLQAFNAAFAEVGL--------DWYWDAPLYTRLL-KVAGGK 51
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
++ Y++ + D ++A+ ID + KT Y + + +G +
Sbjct: 52 ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME---RFEGLDCFLADCQSYVL 237
RPG+ RL+DEA AG +A+ + T +++ L+ +G + RF + D + +
Sbjct: 98 RPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRF----AAIGDAGTTAI 153
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR 297
KKP P +Y+ +RLG+ DCL +EDS GL+AA
Sbjct: 154 -----------------------KKPAPDVYLAVLERLGLEGGDCLAIEDSANGLRAARA 190
Query: 298 AGMACVITYTSSTAEQDFKDAIAIYPDLSN 327
AG+ V+T T+ +A+ F+ A+ + P L +
Sbjct: 191 AGIPTVVTPTAFSAQDSFEGALLVLPHLGD 220
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 122/262 (46%), Gaps = 50/262 (19%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW--DPEFYDVLQNQIGG 124
L+ALIFD DG + E+E +HRQA+N+ F+ Q L+W E Y L GG
Sbjct: 3 LKALIFDVDGTLAETEEVHRQAFNETFA----------AQGLDWYWSKEDYRTLLRTTGG 52
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K +M + + G + AK+ DL KT+RY +II SG V PGV
Sbjct: 53 -KERMAKHRENLG------------SGPSDAKIADL-HKAKTQRYVEIIASGQVGLLPGV 98
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM 244
L+D AKA+G ++A+ + T+++V D +A S
Sbjct: 99 AELIDRAKASGLRLAIATTTTRANV----------------DALIAATFSKP-------- 134
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304
+ GD+V QKKP P +Y+ A + LG+ CL EDS GL +A AG+ V+
Sbjct: 135 AGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFEDSRAGLASARAAGLRVVL 194
Query: 305 TYTSSTAEQDFKDAIAIYPDLS 326
T + T DF A PDLS
Sbjct: 195 TPSEYTRGDDFSAADWRIPDLS 216
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Rhodobacter capsulatus (taxid: 1061) |
| >sp|Q04541|CBBYP_CUPNH Protein CbbY, plasmid OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbYP PE=3 SV=1 | Back alignment and function description |
|---|
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 53/267 (19%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+QALIFD DG + ++E H QA+N AF+ + +WD Y L ++ GGK
Sbjct: 1 MQALIFDVDGTLADTETAHLQAFNAAFAEVGL--------DWHWDAPLYTRLL-KVAGGK 51
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAK------LIDLIQDWKTERYQQIIKSGTVEP 180
++ Y++ + D ++A+ ID + KT Y + + +G +
Sbjct: 52 ERLMHYWR--------------MVDPEEARGCKVKETIDAVHAIKTRHYAERVGAGGLPL 97
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTN 240
RPG+ RL+ EA AG +A+ + T +++ L+ +G + + G F A C +
Sbjct: 98 RPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGAD-WRGR--FAAICDA------ 148
Query: 241 GTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
GT KKP P +Y+ +RLG+ DCL +EDS GL+AA AG+
Sbjct: 149 GT---------------TAIKKPAPDVYLAVLERLGLEAGDCLAIEDSGNGLRAARAAGI 193
Query: 301 ACVITYTSSTAEQDFKDAIAIYPDLSN 327
V+T T+ +A+ F+ A+ + P L +
Sbjct: 194 PTVVTPTTFSAQDSFEGALLVLPHLGD 220
|
Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) |
| >sp|P95649|CBBY_RHOSH Protein CbbY OS=Rhodobacter sphaeroides GN=cbbY PE=3 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 112/252 (44%), Gaps = 46/252 (18%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A++FD DG + E+E LHR+A+N+ F+ V WD E Y L GG +
Sbjct: 2 IEAILFDVDGTLAETEELHRRAFNETFAALGV--------DWFWDREEYRELLTTTGGKE 53
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
R+ + G P+ P+ D I KTER+ ++ G + RPG+
Sbjct: 54 RIARFLRHQKGDPAPL-----PIAD---------IHRAKTERFVALMAEGEIALRPGIAD 99
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
L+ EAK AG ++AV + + +V G E D A
Sbjct: 100 LIAEAKRAGIRLAVATTTSLPNVEALCRACFGHPAREIFDVIAA---------------- 143
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306
GD V +KKP P IY A + L + + + +EDS+ GL+AA AG+ C+++
Sbjct: 144 --------GDMVAEKKPSPDIYRLALRELDVPPERAVALEDSLNGLRAAKGAGLRCIVSP 195
Query: 307 TSSTAEQDFKDA 318
T ++F A
Sbjct: 196 GFYTRHEEFAGA 207
|
Rhodobacter sphaeroides (taxid: 1063) |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 62/254 (24%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFS-HFNVRCDPSSQQSLNWDPEF--YDVLQNQIG 123
++ALIFD DG+I+++E + + F H +V + + F ++ L+ QIG
Sbjct: 2 IKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVWGKVIGTAAGFRPFEYLEEQIG 61
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+ ++ +L + ER+ + ++S + RPG
Sbjct: 62 -----------------------KKLNHEELTQL-------RRERFAKRMESE--KARPG 89
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
V ++ AK G K+ + S++ V L+ + + FE V+ T
Sbjct: 90 VEAYLNAAKDLGLKIGLASSSDYKWVSGHLKQIGLFDDFE------------VIQT---- 133
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
DDV++ KP+P +Y+ AAK LG+S +CL EDSV G AA RAGM CV
Sbjct: 134 -----------ADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRAGMKCV 182
Query: 304 ITYTSSTAEQDFKD 317
I T F+D
Sbjct: 183 IVPNKVTGTLMFED 196
|
Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 62/237 (26%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
LIFD DG I+++E HR+A+ + H+ ++ D + +LN P
Sbjct: 7 GLIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPT--------------- 51
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKL-IDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
W + + + +QA L + KTE + ++ +VEP P L
Sbjct: 52 --WRIAQ------------AIIELNQADLDPHALAREKTEAVRSMLLD-SVEPLP----L 92
Query: 188 MDEAKA-AGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
+D K+ G++ ++S++ L +G+ + D +A
Sbjct: 93 VDVVKSWHGRRPMAVGTGSESAIAEALLAHLGLRHY--FDAVVA---------------- 134
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
D VK KP P ++ A+R+G+ C+V ED+ G+QAA AGM V
Sbjct: 135 --------ADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU PE=1 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 93/251 (37%), Gaps = 59/251 (23%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW---DPEFYDVLQNQIG 123
LQ +IFD DGVI ++ HLH QA+ + + D +SL D +LQ+
Sbjct: 3 LQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQH--- 59
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RP 182
GGK ++A+L K Y ++ TV P
Sbjct: 60 GGK-------------------EGDFNSQERAQLAYR----KNLLYVHSLRELTVNAVLP 96
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
G+ L+ + +A V + S + + IL L E F F AD
Sbjct: 97 GIRSLLADLRAQQISVGLASVSLNAPTILAALEL--REFF----TFCADA---------- 140
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302
+K KPDP I++ A LG+ + C+ +ED+ G+ A +GM
Sbjct: 141 -------------SQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRS 187
Query: 303 VITYTSSTAEQ 313
V T Q
Sbjct: 188 VGIGAGLTGAQ 198
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. Glucose or lactose are used in preference to maltose, which is only utilized after glucose or lactose has been exhausted. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Escherichia coli (strain K12) (taxid: 83333) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM PE=1 SV=1 | Back alignment and function description |
|---|
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 57/240 (23%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DGVI ++ H A+ H + D + +N
Sbjct: 1 MKAVIFDLDGVITDTAEYHFLAWK----HIAEQIDIPFDRDMN----------------- 39
Query: 127 PKMRWYFKEHGWPSSTIFDNPPV--TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR-PG 183
+++ +E S IF T+ ++ +L+ K YQ +I T E PG
Sbjct: 40 ERLKGISREESLESILIFGGAETKYTNAEKQELMH----RKNRDYQMLISKLTPEDLLPG 95
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
+ RL+ + K K+ + S++ + IL R +D F A L
Sbjct: 96 IGRLLCQLKNENIKIGLASSSRNAPKIL--------RRLAIIDDFHAIVDPTTL------ 141
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+ KPDP I++TAA L +S DC +ED+ G+ A AGM V
Sbjct: 142 ---------------AKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV 186
|
Catalyze the interconversion of D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), and forming beta-D-glucose 1,6-(bis)phosphate (beta-G16P) as an intermediate. The beta-phosphoglucomutase (Beta-PGM) acts on the beta-C(1) anomer of G1P. It play a key role in the regulation of the flow of carbohydrate intermediates in glycolysis and the formation of the sugar nucleotide UDP-glucose. Bacillus subtilis (strain 168) (taxid: 224308) EC: 5 EC: . EC: 4 EC: . EC: 2 EC: . EC: 6 |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 56/243 (23%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DGV++++E L+ +AY R S + D L +I G
Sbjct: 1 MEAVIFDMDGVLMDTEPLYFEAYR--------RVAESYGKPYTED------LHRRIMGVP 46
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ G P I D + + K + +++K PGV
Sbjct: 47 ER-------EGLP---ILMEALEIKDSLENFKKRVHEEKKRVFSELLKEN-----PGVRE 91
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
++ K+ K+A+ ++ + +ER LD + Y
Sbjct: 92 ALEFVKSKRIKLALATSTPQRE---------ALERLRRLDL-----EKYF---------- 127
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306
V V GD VK KPDP IY+ +RL + + +V EDS G++AA AG+ +
Sbjct: 128 DVMVF---GDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGV 184
Query: 307 TSS 309
S
Sbjct: 185 VHS 187
|
Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P65070|Y3433_MYCBO Uncharacterized protein Mb3433 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3433 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 112/261 (42%), Gaps = 45/261 (17%)
Query: 59 RVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPE---- 113
RV + ++A +FD DGV+ ++ LH +A+ F ++ R + + ++ + +DP
Sbjct: 15 RVLGLPEKVRACLFDLDGVLTDTASLHTKAWKAMFDAYLAERAERTGEKFVPFDPAADYH 74
Query: 114 -FYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDD--QAKLIDLIQDWKTERYQ 170
+ D + + G +R + SS + P + DD A+ + + + K +
Sbjct: 75 TYVDGKKREDG-----VRSFL------SSRAIEIPDGSPDDPGAAETVYGLGNRKNDMLH 123
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230
++++ + G R ++ AAG VAV S++ + +L GLD F+
Sbjct: 124 KLLRDDGAQVFDGSRRYLEAVTAAGLGVAVVSSSANTRDVLATT---------GLDRFVQ 174
Query: 231 DCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 290
V TL + KP P ++ AA+ LG++ V ED++
Sbjct: 175 QRVDGV-----TLREEHIA-----------GKPAPDSFLRAAELLGVTPDAAAVFEDALS 218
Query: 291 GLQAATRAGMACVITYTSSTA 311
G+ AA RAG V+ + T
Sbjct: 219 GV-AAGRAGNFAVVVGINRTG 238
|
Mycobacterium bovis (taxid: 1765) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | ||||||
| 255584279 | 309 | 2-deoxyglucose-6-phosphate phosphatase, | 0.889 | 0.990 | 0.691 | 1e-131 | |
| 359496682 | 328 | PREDICTED: protein CbbY-like [Vitis vini | 0.770 | 0.807 | 0.773 | 1e-125 | |
| 356525461 | 323 | PREDICTED: protein CbbY, chromosomal-lik | 0.781 | 0.832 | 0.747 | 1e-124 | |
| 297802106 | 314 | hypothetical protein ARALYDRAFT_912489 [ | 0.877 | 0.961 | 0.675 | 1e-124 | |
| 356512689 | 310 | PREDICTED: protein CbbY, chromosomal-lik | 0.735 | 0.816 | 0.769 | 1e-122 | |
| 18420570 | 316 | haloacid dehalogenase-like hydrolase fam | 0.834 | 0.908 | 0.694 | 1e-122 | |
| 255639539 | 310 | unknown [Glycine max] | 0.735 | 0.816 | 0.766 | 1e-122 | |
| 22022552 | 316 | AT4g39970/T5J17_140 [Arabidopsis thalian | 0.834 | 0.908 | 0.690 | 1e-122 | |
| 21593238 | 316 | unknown [Arabidopsis thaliana] | 0.834 | 0.908 | 0.687 | 1e-121 | |
| 224093744 | 261 | predicted protein [Populus trichocarpa] | 0.715 | 0.942 | 0.775 | 1e-120 |
| >gi|255584279|ref|XP_002532876.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] gi|223527361|gb|EEF29505.1| 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 238/344 (69%), Positives = 275/344 (79%), Gaps = 38/344 (11%)
Query: 3 STVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALR--FKSNKKPLSLSLTRKALRV 60
++++LSQ S+ S + FS L+ + H ++R F S + SL + V
Sbjct: 2 ASMLLSQ-----SNLSPNPLSRSFSFLSKSQTLHFRSIRRSFPSRRSHQSLCFS-----V 51
Query: 61 SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
SASS SL+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNVRC +S Q+L W P+FYDVLQN
Sbjct: 52 SASSASLEALIFDCDGVILESEHLHRQAYNDAFAHFNVRC--TSDQTLIWAPDFYDVLQN 109
Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
+IGGGKPKMRWYFKEHGWPSSTIF+ PP D+ +A LID +QDWKTERY++IIKSGTV+P
Sbjct: 110 RIGGGKPKMRWYFKEHGWPSSTIFETPPEDDESRANLIDTLQDWKTERYKEIIKSGTVQP 169
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTN 240
RPGVL+LMDEAKAAGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLA
Sbjct: 170 RPGVLQLMDEAKAAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLA---------- 219
Query: 241 GTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
GDDVK+KKPDPSIYVTA+K+LG+SEKDCLVVEDSVIGLQAAT+AGM
Sbjct: 220 --------------GDDVKEKKPDPSIYVTASKKLGVSEKDCLVVEDSVIGLQAATKAGM 265
Query: 301 ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 344
+CVITYTSSTA+QDFKDAIA+YPDLSNVRLKDLELLLQNVVAAS
Sbjct: 266 SCVITYTSSTADQDFKDAIAMYPDLSNVRLKDLELLLQNVVAAS 309
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496682|ref|XP_003635299.1| PREDICTED: protein CbbY-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/291 (77%), Positives = 244/291 (83%), Gaps = 26/291 (8%)
Query: 54 TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPS-SQQSLNWDP 112
T AL VSASS +LQALIFDCDGVI+ESE LHR+AYNDAFSHFNVRC S SQ LNWD
Sbjct: 62 TPNALSVSASS-TLQALIFDCDGVILESEDLHRRAYNDAFSHFNVRCPSSPSQHPLNWDS 120
Query: 113 EFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI 172
FYD LQN+IGGGKPKMRWYFKE+GWPSST+FD PP D D+AKLID++QDWKTERY++I
Sbjct: 121 HFYDQLQNRIGGGKPKMRWYFKEYGWPSSTVFDTPPEDDGDRAKLIDILQDWKTERYKEI 180
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC 232
IKSGTVEPRPGVLRLM+E KAAG K+AVCSAATKSSVILCLENLIG+ERF+GLDCFLA
Sbjct: 181 IKSGTVEPRPGVLRLMEETKAAGIKLAVCSAATKSSVILCLENLIGIERFQGLDCFLA-- 238
Query: 233 QSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGL 292
GDDVK+KKPDPSIY TA KRLG+SEKDCLVVEDSVIGL
Sbjct: 239 ----------------------GDDVKEKKPDPSIYQTAVKRLGVSEKDCLVVEDSVIGL 276
Query: 293 QAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 343
QAAT AGM+CVITYTSSTA+QDFKDAIAIYPDLSNVRLKDLELLLQNVV A
Sbjct: 277 QAATGAGMSCVITYTSSTADQDFKDAIAIYPDLSNVRLKDLELLLQNVVPA 327
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525461|ref|XP_003531343.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/297 (74%), Positives = 246/297 (82%), Gaps = 28/297 (9%)
Query: 51 LSLTRKALRVSAS---SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS 107
S ++ VSAS S SLQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS
Sbjct: 50 FSSKHRSFSVSASASTSNSLQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPG 109
Query: 108 -LNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKT 166
LNWD +FYD LQN IGGGKPKMRWYFKEHGWP+ST+F PP D+D+AKLID +QDWKT
Sbjct: 110 PLNWDVQFYDELQNLIGGGKPKMRWYFKEHGWPTSTLFQTPPTNDEDRAKLIDTLQDWKT 169
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
ERY++IIKSGTV+PRPGVLRLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLD
Sbjct: 170 ERYKEIIKSGTVKPRPGVLRLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLD 229
Query: 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVE 286
CFLA GDDVK+KKPDPSIYVTA+K+LGISEKDCLVVE
Sbjct: 230 CFLA------------------------GDDVKEKKPDPSIYVTASKKLGISEKDCLVVE 265
Query: 287 DSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 343
DSVIGLQAAT+AGM+CV+TYT STAEQDFK+AIAIYPDLSNVRLKDLELLLQ+VVAA
Sbjct: 266 DSVIGLQAATQAGMSCVVTYTPSTAEQDFKEAIAIYPDLSNVRLKDLELLLQDVVAA 322
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297802106|ref|XP_002868937.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] gi|297314773|gb|EFH45196.1| hypothetical protein ARALYDRAFT_912489 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/333 (67%), Positives = 266/333 (79%), Gaps = 31/333 (9%)
Query: 13 LSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALI 71
S S++ +++ + SSL P F T LRFKS SL + VSA S+SL+ALI
Sbjct: 12 FSPSTAGSSSVSSSSSLIGLPRFQT--LRFKSR----SLYSKSRVSPVSALPSRSLEALI 65
Query: 72 FDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW 131
FDCDGVI+ESE+LHRQAYNDAFSHF+VRC PSS +SLNW EFYD QN +GGGKPKMRW
Sbjct: 66 FDCDGVILESENLHRQAYNDAFSHFDVRCPPSSSESLNWSLEFYDKFQNLVGGGKPKMRW 125
Query: 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEA 191
YFKE+GWP+STIF++PP DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEA
Sbjct: 126 YFKENGWPTSTIFESPPENDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEA 185
Query: 192 KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC 251
KAAGKK+AVCSAATKSSVILCLENLI +ERF+GLDCFLA
Sbjct: 186 KAAGKKLAVCSAATKSSVILCLENLIDIERFQGLDCFLA--------------------- 224
Query: 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311
GDDVK+KKPDPSIY+TAA++LG+S KDCLV+EDSVIGLQAAT+AGM+CVITYTSST+
Sbjct: 225 ---GDDVKEKKPDPSIYITAAEKLGVSVKDCLVIEDSVIGLQAATKAGMSCVITYTSSTS 281
Query: 312 EQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 344
+QDF DAIA+YPDLSNV+LKDLE LLQ +V A+
Sbjct: 282 DQDFNDAIAVYPDLSNVKLKDLETLLQTIVTAA 314
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512689|ref|XP_003525049.1| PREDICTED: protein CbbY, chromosomal-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/278 (76%), Positives = 236/278 (84%), Gaps = 25/278 (8%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS-LNWDPEFYDVLQNQIGGG 125
LQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS LNWD +FYD LQN IGGG
Sbjct: 56 LQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPGPLNWDVQFYDELQNLIGGG 115
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
KPKMRWYFKEHGWP ST+F+ PP D+D+AKLID +QDWKTERY++IIKSGTV+PRPGVL
Sbjct: 116 KPKMRWYFKEHGWPKSTLFETPPTNDEDRAKLIDTLQDWKTERYKEIIKSGTVKPRPGVL 175
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
RLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLDCFLA
Sbjct: 176 RLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLDCFLA--------------- 220
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
GDDVK+KKP PSIYVTA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+T
Sbjct: 221 ---------GDDVKEKKPSPSIYVTASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVT 271
Query: 306 YTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 343
YT STAEQDFK+AIAIYPDLSNVRLKDLELLLQ+VVAA
Sbjct: 272 YTPSTAEQDFKEAIAIYPDLSNVRLKDLELLLQDVVAA 309
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18420570|ref|NP_568077.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] gi|51969804|dbj|BAD43594.1| unnamed protein product [Arabidopsis thaliana] gi|51969872|dbj|BAD43628.1| unnamed protein product [Arabidopsis thaliana] gi|51970306|dbj|BAD43845.1| unnamed protein product [Arabidopsis thaliana] gi|332661747|gb|AEE87147.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/317 (69%), Positives = 256/317 (80%), Gaps = 30/317 (9%)
Query: 29 LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQ 87
L P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29 LIGFPRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQ 83
Query: 88 AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
AYNDAFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84 AYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143
Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
P DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203
Query: 208 SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSI 267
SVILCLENLI +ERF+GLDCFLA GDDVK+KKPDPSI
Sbjct: 204 SVILCLENLIDIERFQGLDCFLA------------------------GDDVKEKKPDPSI 239
Query: 268 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327
Y+TAA++LG+S KDCLVVEDSVIGLQAAT+AGM+CVITYTSST++Q+F DAIA+YPDLSN
Sbjct: 240 YITAAEKLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVYPDLSN 299
Query: 328 VRLKDLELLLQNVVAAS 344
V+LKDLE LLQ +V A+
Sbjct: 300 VKLKDLETLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255639539|gb|ACU20064.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/278 (76%), Positives = 235/278 (84%), Gaps = 25/278 (8%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQS-LNWDPEFYDVLQNQIGGG 125
LQALIFDCDGVI+ESEHLHRQAYNDAF HFNVRC SS LNWD +FYD LQN IGGG
Sbjct: 56 LQALIFDCDGVILESEHLHRQAYNDAFVHFNVRCPSSSSPGPLNWDVQFYDELQNLIGGG 115
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
KPKMRWYFKEHGWP ST+F+ PP D+D+AKLID +QDWKTERY++IIKSGT +PRPGVL
Sbjct: 116 KPKMRWYFKEHGWPKSTLFETPPTNDEDRAKLIDTLQDWKTERYKEIIKSGTAKPRPGVL 175
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
RLMDEA+ AGKK+AVCSAATKSSVILCLENLIG+ERF+GLDCFLA
Sbjct: 176 RLMDEARDAGKKLAVCSAATKSSVILCLENLIGIERFQGLDCFLA--------------- 220
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
GDDVK+KKP PSIYVTA+K+LGISEKDCLVVEDSVIGLQAAT+AGM+CV+T
Sbjct: 221 ---------GDDVKEKKPSPSIYVTASKKLGISEKDCLVVEDSVIGLQAATQAGMSCVVT 271
Query: 306 YTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 343
YT STAEQDFK+AIAIYPDLSNVRLKDLELLLQ+VVAA
Sbjct: 272 YTPSTAEQDFKEAIAIYPDLSNVRLKDLELLLQDVVAA 309
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22022552|gb|AAM83233.1| AT4g39970/T5J17_140 [Arabidopsis thaliana] gi|23505871|gb|AAN28795.1| At4g39970/T5J17_140 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/317 (69%), Positives = 256/317 (80%), Gaps = 30/317 (9%)
Query: 29 LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQ 87
L P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29 LIGFPRFQT--LRFKSRS---VYSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQ 83
Query: 88 AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
AYNDAFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84 AYNDAFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143
Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
P DDD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203
Query: 208 SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSI 267
SVILCLENLI +ERF+GLDCFLA GDDVK+KKPDPSI
Sbjct: 204 SVILCLENLIDIERFQGLDCFLA------------------------GDDVKEKKPDPSI 239
Query: 268 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327
Y+TAA++LG+S KDCLVVEDSVIGLQAAT+AGM+CVITYTSST++Q+F DAIA+YPDLSN
Sbjct: 240 YITAAEKLGVSVKDCLVVEDSVIGLQAATKAGMSCVITYTSSTSDQNFNDAIAVYPDLSN 299
Query: 328 VRLKDLELLLQNVVAAS 344
V+LKDL+ LLQ +V A+
Sbjct: 300 VKLKDLKTLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|21593238|gb|AAM65187.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/317 (68%), Positives = 254/317 (80%), Gaps = 30/317 (9%)
Query: 29 LTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSA-SSQSLQALIFDCDGVIIESEHLHRQ 87
L P F T LRFKS S +R + VSA S+SL+ALIFDCDGVI+ESE+LHRQ
Sbjct: 29 LIGFPRFQT--LRFKSRS---VYSKSRASSPVSALPSRSLEALIFDCDGVILESENLHRQ 83
Query: 88 AYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNP 147
AYNDAFSHF+VRC PSS SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+P
Sbjct: 84 AYNDAFSHFDVRCPPSSSASLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSP 143
Query: 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207
P DDD+AKLID +QDWKT+RY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKS
Sbjct: 144 PQNDDDRAKLIDTLQDWKTDRYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKS 203
Query: 208 SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSI 267
SVILCLENL+ +ERF+GLDCFLA GDDVK+KKPDPSI
Sbjct: 204 SVILCLENLLDIERFQGLDCFLA------------------------GDDVKEKKPDPSI 239
Query: 268 YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327
Y+TAA++LG+S KDCLVV DSVIGLQAAT+AGM+CVITYTSST++QDF DAIA+YPDLSN
Sbjct: 240 YITAAEKLGVSVKDCLVVGDSVIGLQAATKAGMSCVITYTSSTSDQDFNDAIAVYPDLSN 299
Query: 328 VRLKDLELLLQNVVAAS 344
V+L DLE LLQ +V A+
Sbjct: 300 VKLTDLETLLQTIVTAA 316
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093744|ref|XP_002309972.1| predicted protein [Populus trichocarpa] gi|222852875|gb|EEE90422.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/272 (77%), Positives = 231/272 (84%), Gaps = 26/272 (9%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
L+ALIFDCDGVI+ESEHLHRQAYNDAF+HFNV C SS LNW P+FYDVLQN+IGGGK
Sbjct: 16 LEALIFDCDGVILESEHLHRQAYNDAFAHFNVIC--SSSLPLNWSPDFYDVLQNRIGGGK 73
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
PKMRWYFKEHGWPSS +F+ PP D+ +AKLID +QDWKTERY++IIKSGTVEPRPGVLR
Sbjct: 74 PKMRWYFKEHGWPSSNLFEKPPEDDESRAKLIDTLQDWKTERYKEIIKSGTVEPRPGVLR 133
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
LMDEAK AGKK+AVCSAATKSSVILCLENLIGMERF+GLDCFLA
Sbjct: 134 LMDEAKTAGKKLAVCSAATKSSVILCLENLIGMERFQGLDCFLA---------------- 177
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306
GDDVK+KKPDPSIYVTA+K LG+SE+DCLVVEDSVIGLQAAT AGM+CVITY
Sbjct: 178 --------GDDVKEKKPDPSIYVTASKMLGVSERDCLVVEDSVIGLQAATTAGMSCVITY 229
Query: 307 TSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
T STA+QDFKDAIAIYPDLSNVRLKDLELLLQ
Sbjct: 230 TPSTADQDFKDAIAIYPDLSNVRLKDLELLLQ 261
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 344 | ||||||
| TAIR|locus:2140050 | 316 | AT4G39970 [Arabidopsis thalian | 0.561 | 0.610 | 0.743 | 2.9e-114 | |
| TAIR|locus:2101165 | 319 | AT3G48420 [Arabidopsis thalian | 0.517 | 0.557 | 0.34 | 7.4e-40 | |
| TIGR_CMR|BA_4427 | 221 | BA_4427 "hydrolase, haloacid d | 0.238 | 0.371 | 0.329 | 3.1e-14 | |
| TIGR_CMR|GSU_1839 | 228 | GSU_1839 "hydrolase, haloacid | 0.232 | 0.350 | 0.329 | 1.1e-12 | |
| TAIR|locus:2153348 | 372 | AT5G45170 "AT5G45170" [Arabido | 0.453 | 0.419 | 0.271 | 8.5e-12 | |
| TAIR|locus:2010728 | 1055 | AT1G56500 [Arabidopsis thalian | 0.223 | 0.072 | 0.375 | 2.3e-11 | |
| UNIPROTKB|Q9KN63 | 219 | VC_A0102 "CbbY family protein" | 0.133 | 0.210 | 0.5 | 1.5e-10 | |
| TIGR_CMR|VC_A0102 | 219 | VC_A0102 "haloacid dehalogenas | 0.133 | 0.210 | 0.5 | 1.5e-10 | |
| TIGR_CMR|SO_0431 | 217 | SO_0431 "HAD-superfamily hydro | 0.122 | 0.193 | 0.428 | 2.7e-10 | |
| UNIPROTKB|P77475 | 188 | yqaB [Escherichia coli K-12 (t | 0.139 | 0.255 | 0.437 | 3.1e-10 |
| TAIR|locus:2140050 AT4G39970 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 764 (274.0 bits), Expect = 2.9e-114, Sum P(2) = 2.9e-114
Identities = 148/199 (74%), Positives = 170/199 (85%)
Query: 33 PIFHTNALRFKSNKKPLSLSLTRKALRVSASS-QSLQALIFDCDGVIIESEHLHRQAYND 91
P F T LRFKS S +R + VSA +SL+ALIFDCDGVI+ESE+LHRQAYND
Sbjct: 33 PRFQT--LRFKSRSV---YSKSRVSSPVSALPLRSLEALIFDCDGVILESENLHRQAYND 87
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
AFSHF+VRC PSS +SL+W EFYD QN +GGGKPKMRWYFKE+GWP+STIFD+PP D
Sbjct: 88 AFSHFDVRCPPSSSESLDWSLEFYDKFQNLVGGGKPKMRWYFKENGWPTSTIFDSPPQND 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
DD+AKLID +QDWKTERY++IIKSG+VEPRPGV+RLMDEAKAAGKK+AVCSAATKSSVIL
Sbjct: 148 DDRAKLIDTLQDWKTERYKEIIKSGSVEPRPGVIRLMDEAKAAGKKLAVCSAATKSSVIL 207
Query: 212 CLENLIGMERFEGLDCFLA 230
CLENLI +ERF+GLDCFLA
Sbjct: 208 CLENLIDIERFQGLDCFLA 226
|
|
| TAIR|locus:2101165 AT3G48420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 249 (92.7 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 68/200 (34%), Positives = 107/200 (53%)
Query: 40 LRF--KSNK-KPLSLSLTRKALRVSASSQSL----QALIFDCDGVIIESEHL-HRQAYND 91
LRF KS + KP+ +R ++S SL AL+FDCDGV++++E HR ++ND
Sbjct: 42 LRFNGKSLRAKPMVYRSSRSVGVTCSASSSLTTLPSALLFDCDGVLVDTEKDGHRISFND 101
Query: 92 AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
F ++ ++ WD + Y L +IGGGK +M YF + GWP + P +
Sbjct: 102 TFKERDL--------NVTWDVDLYGELL-KIGGGKERMTAYFNKVGWP-----EKAPKDE 147
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
++ + I + KTE + +I+ + RPGV +L+D+A G KVAVCS + + +V
Sbjct: 148 AERKEFIAGLHKQKTELFMVLIEKKLLPLRPGVAKLVDQALTNGVKVAVCSTSNEKAVSA 207
Query: 212 CLENLIGMERFEGLDCFLAD 231
+ L+G ER E + F D
Sbjct: 208 IVSCLLGPERAEKIKIFAGD 227
|
|
| TIGR_CMR|BA_4427 BA_4427 "hydrolase, haloacid dehalogenase-like family" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 132 (51.5 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 28/85 (32%), Positives = 51/85 (60%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315
+DV++ KPDP++Y A + LGI + + EDS+ GL+AA AG+ CV+ T F
Sbjct: 134 EDVEKVKPDPALYRVAIEDLGIDSSEAVAFEDSLNGLKAAIAAGLTCVVVPNDVTRNLPF 193
Query: 316 KDAIAIYPDLSNVRLKDLELLLQNV 340
++ + + +++ K L+ ++QN+
Sbjct: 194 ENH---HLRIESMKDKSLKEVMQNI 215
|
|
| TIGR_CMR|GSU_1839 GSU_1839 "hydrolase, haloacid dehalogenase-like family" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 103 (41.3 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 256 DDVKQKKPDPSIYVTAAKRLG-------ISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308
D+V KPDP+ Y A +RL I + C+ +ED+ G+ +AT AG+ V+ T+
Sbjct: 138 DEVSASKPDPASYALAVRRLTAAFPNRQIRPETCIAIEDTPAGIASATGAGIG-VLAVTN 196
Query: 309 STAEQDFKDAIAIYPDLSNVRLKDLELL 336
S A + L++V L DL L
Sbjct: 197 SYPAVRLGGARRVVDSLADVGLADLAAL 224
|
|
| TAIR|locus:2153348 AT5G45170 "AT5G45170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 141 (54.7 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 47/173 (27%), Positives = 79/173 (45%)
Query: 52 SLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNW- 110
S+ A R + A+I + D V+I++ +RQA+N AF + C NW
Sbjct: 63 SICLSASREDVNPSEEFAVILEVDRVMIDTWSSNRQAFNVAFQKLGLDC-------ANWP 115
Query: 111 DPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQ 170
+P + D+L+ + + YF + GWPSS P ++ +A + + K
Sbjct: 116 EPVYSDLLRKGAADEEKMLLLYFNQIGWPSSL-----PTSE--KASFVKSVLREKKNAMD 168
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMER 221
+ + S ++ R GV +D A A VA+ +A KS V L + ++G ER
Sbjct: 169 EFLISKSLPLRSGVQEFIDNAYAEKVPVAIVTAYCKSGDKVALSIVEMLGQER 221
|
|
| TAIR|locus:2010728 AT1G56500 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 140 (54.3 bits), Expect = 2.3e-11, Sum P(3) = 2.3e-11
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315
D + KP P I++ AAK LG+ +C+V+ED++ G+QAA A M C+ T+ +E
Sbjct: 211 DAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAAQAANMRCIAVKTT-LSEAIL 269
Query: 316 KDA--IAIYPDLSNVRLKDL 333
KDA I D+ N+ + D+
Sbjct: 270 KDAGPSMIRDDIGNISINDI 289
|
|
| UNIPROTKB|Q9KN63 VC_A0102 "CbbY family protein" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
G +V Q KP P IY+ AA+RLG+ + CL EDS G++AA A M
Sbjct: 137 GCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
| TIGR_CMR|VC_A0102 VC_A0102 "haloacid dehalogenase/epoxide hydrolase family protein" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
G +V Q KP P IY+ AA+RLG+ + CL EDS G++AA A M
Sbjct: 137 GCEVTQGKPHPEIYLLAAERLGVEPQQCLAFEDSNNGIKAAMAAQM 182
|
|
| TIGR_CMR|SO_0431 SO_0431 "HAD-superfamily hydrolase, subfamily IA, variant 3 protein family" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 91 (37.1 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
KP P +Y+ A LG+ + CL +EDS G+ AA A M V
Sbjct: 146 KPHPEVYLNCATALGVDPRYCLAIEDSFNGIIAARAANMQTV 187
|
|
| UNIPROTKB|P77475 yqaB [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 109 (43.4 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
D VK KP P ++ A+R+G+ C+V ED+ G+QAA AGM V
Sbjct: 136 DHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 344 | |||
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 1e-147 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 6e-37 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 8e-26 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 1e-19 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 6e-19 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 9e-19 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-17 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-15 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 6e-15 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 4e-12 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 5e-12 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 1e-10 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 2e-10 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 3e-10 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 9e-10 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 2e-09 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 2e-07 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 2e-06 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 2e-06 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 6e-06 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 2e-05 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 5e-05 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 5e-05 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 6e-05 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 1e-04 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 2e-04 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 3e-04 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 8e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 0.001 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 0.003 | |
| TIGR01656 | 147 | TIGR01656, Histidinol-ppas, histidinol-phosphate p | 0.003 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 0.004 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 416 bits (1071), Expect = e-147
Identities = 131/315 (41%), Positives = 182/315 (57%), Gaps = 39/315 (12%)
Query: 35 FHTNALRFKSNKKPLSLSLTRKALRV----SASSQSLQALIFDCDGVIIESE-HLHRQAY 89
+ L S + R +++S +AL+FDCDGV++E+E HR A+
Sbjct: 4 SSSARLASASRTRAGRRRRRRSRSTARVASASASALPEALLFDCDGVLVETERDGHRVAF 63
Query: 90 NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPV 149
NDAF F +R + WD E YD L N IGGGK +M WYF E+GWP+STI + P
Sbjct: 64 NDAFKEFGLR-------PVEWDVELYDELLN-IGGGKERMTWYFNENGWPTSTI-EKAPK 114
Query: 150 TDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209
++++ +L+D + D KTE ++++I+SG + RPGVLRLMDEA AAG KVAVCS + + +V
Sbjct: 115 DEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAV 174
Query: 210 ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYV 269
+ L+G ER +GLD F GDDV +KKPDP IY
Sbjct: 175 SKIVNTLLGPERAQGLDVFA-------------------------GDDVPKKKPDPDIYN 209
Query: 270 TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 329
AA+ LG+ C+VVEDSVIGLQAA AGM C++T +S TA++DF A A++ L +V
Sbjct: 210 LAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVP 269
Query: 330 LKDLELLLQNVVAAS 344
L+D +LL +
Sbjct: 270 LEDFDLLFCESLLTK 284
|
Length = 286 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 6e-37
Identities = 68/272 (25%), Positives = 109/272 (40%), Gaps = 58/272 (21%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+IFD DG +++SE LH +A+ +A + + + ++ GGG
Sbjct: 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGI 48
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK-SGTVEPRPGVL 185
+ D + Y+ ++P PGV+
Sbjct: 49 AR--------IIDLLRKLAAGEDPADLAEL--------ERLLYEAEALELEGLKPIPGVV 92
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
L+++ KA G +AV S++ + + L R LD F V++T
Sbjct: 93 ELLEQLKARGIPLAVASSSPRRAAERVLA------RLGLLDYFD------VIVT------ 134
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
DDV + KP P IY+ AA+RLG+ ++C+VVEDS G+QAA AGM V
Sbjct: 135 ---------ADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG- 184
Query: 306 YTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337
+ A D + L +L LL
Sbjct: 185 VPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216
|
Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 8e-26
Identities = 59/240 (24%), Positives = 94/240 (39%), Gaps = 60/240 (25%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A+IFD DGVI ++ LH QA+ + + + D +SL G
Sbjct: 1 YKAVIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESL---------------KGL 45
Query: 127 PKM---RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+ R K G S A+ K E Y+++++ V PG
Sbjct: 46 SREDILRAILKLRGDGLS------LEEIHQLAER-------KNELYRELLRLTGVAVLPG 92
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
+ L+ KA G V + S++ + IL L + F+ + D
Sbjct: 93 IRNLLKRLKAKGIAVGLGSSSKNAPRILAKLGLR--DYFD----AIVD------------ 134
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+VK KP P ++ AA+ LG+ +C+V ED++ G+QAA AGM V
Sbjct: 135 -----------ASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAAGMFAV 183
|
This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 1e-19
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 55/236 (23%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A+IFD DGVI ++ H A+ + + + +D EF + L+ G + +
Sbjct: 1 AVIFDLDGVITDTAEYHYLAWKHL----------ADELGIPFDEEFNESLK---GVSREE 47
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP-RPGVLRL 187
+ G +++++ +L + K + Y +++K T PG+ L
Sbjct: 48 SLERILDLG--------GKKYSEEEKEELAER----KNDYYVELLKELTPADVLPGIKSL 95
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ + K K+A+ SA+ + IL E L ++ F+ + D
Sbjct: 96 LADLKKNNIKIALASASKNAPTIL--EKLELIDYFD----AIVD---------------- 133
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
++K+ KPDP I++ AA+ LG+S +C+ +ED+ G++A AGM V
Sbjct: 134 -------PAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAV 182
|
This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 6e-19
Identities = 56/277 (20%), Positives = 107/277 (38%), Gaps = 61/277 (22%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
++A++FD DG +++S +A+N A + P + ++ IG
Sbjct: 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELG------------LPPLDEEEIRQLIGL 49
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
G ++ I D++ A +L++ + E + PGV
Sbjct: 50 GLDEL-------------IERLLGEADEEAA--AELVERLREEFLTAYAELLESRLFPGV 94
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM 244
L+ K+AG K+ + + + + + L+ + D F
Sbjct: 95 KELLAALKSAGYKLGIVTNKPEREL----DILL--KALGLADYFDV-------------- 134
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV- 303
V GDDV KPDP + ++LG+ ++ L+V DS+ + AA AG+ V
Sbjct: 135 --IVG-----GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVG 187
Query: 304 ITYTSSTAEQDFKD-AIAIYPDLSNVRLKDLELLLQN 339
+T+ ++ E+ + A + L+ +L LL
Sbjct: 188 VTWGYNSREELAQAGADVVIDSLA-----ELLALLAE 219
|
Length = 220 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 9e-19
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 62/236 (26%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A++FD DGV++++ H + + A + + L+ +
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPD-----ELGV----SEVGSLELAL------ 45
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
RW K ++ +D L + Y+ + K G P PGV L+
Sbjct: 46 RRWKAKYGR----------TMSAEDAQLLYKQLF------YEALEKEGLK-PLPGVRALL 88
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLADCQSYVLMTNGTLMPNR 247
+ +A GKK+A+ + + ++ L LE GL F
Sbjct: 89 EALRARGKKLALLTNSPRADAKLVLEL--------GLRALF------------------D 122
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
V + + DV KPDP IY+ A K+LG+ +CL V+DS G+ AA AGM V
Sbjct: 123 VVIDSS---DVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHTV 175
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 4e-17
Identities = 51/233 (21%), Positives = 78/233 (33%), Gaps = 50/233 (21%)
Query: 69 ALIFDCDGVIIESEHLH--RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
A++FD DG + + E + +A +A + V N E + L ++
Sbjct: 3 AVVFDLDGTLTDGEPVVPEAEALLEAAAALGV--AIVIAAGENLTKEGREELVRRLLLRA 60
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+E +T+ V D LI L T PG
Sbjct: 61 LAGEELLEELLRAGATVVA---VLDLVVLGLIAL----------------TDPLYPGARE 101
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
+ E K AG K+A+ + + + R GL L
Sbjct: 102 ALKELKEAGIKLAILTGDNRLTANAIA-------RLLGLFDAL----------------- 137
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299
V A V KPDP I+ A + LG+ ++ L+V D V + AA AG
Sbjct: 138 ---VSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 1e-15
Identities = 54/235 (22%), Positives = 88/235 (37%), Gaps = 62/235 (26%)
Query: 70 LIFDCDGVIIESEHLHRQAYND-AFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
+IFD DG +I+ + + +A D A + D ++ + GG P
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGL------------DISAEELREA---GGLPF 45
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ + P+ D E + +EP P V+ L+
Sbjct: 46 DEAL--------ADLLREHPID-----------PDEILEALLEYNLESRLEPFPDVVELL 86
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
KA G K+ + S ++ +V E L+ E+ LD F + V
Sbjct: 87 RRLKAKGVKLVILSNGSREAV----ERLL--EKLGLLDLF-----------------DAV 123
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
DDV +KPDP Y +RLG+ ++ L ++DS L+AA AG+ V
Sbjct: 124 FTS----DDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
|
Length = 176 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 6e-15
Identities = 83/344 (24%), Positives = 130/344 (37%), Gaps = 77/344 (22%)
Query: 2 ASTVILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKS-----NKKPLSLSLTRK 56
S + + ++ S + + R KS K + T +
Sbjct: 12 FSWPRRHCAGDFPPALAFASSIRGRRSRSGVWLGKNGGARSKSCAKVEEKSRGAEIATEE 71
Query: 57 ALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYD 116
+VSA ++FD DGV+ SE R+A D F+ V ++ P F
Sbjct: 72 WGKVSA-------VLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE-----DFVP-FMG 118
Query: 117 VLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG 176
+ GG ++ D D AK +R+ +I
Sbjct: 119 TGEANFLGGVASVK---------------GVKGFDPDAAK----------KRFFEIYLEK 153
Query: 177 TVEPR-----PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAD 231
+P PG L L+ + K G KVAV S+A + V D LA
Sbjct: 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKV----------------DANLAA 197
Query: 232 CQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 291
+ M + + D + KP P I++ AAK LG+ +C+V+ED++ G
Sbjct: 198 AGLPLSMFDAIV----------SADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAG 247
Query: 292 LQAATRAGMACVITYTSSTAEQDFKDA--IAIYPDLSNVRLKDL 333
+QAA AGM C I T++ +E+ KDA I D+ N+ L D+
Sbjct: 248 VQAARAAGMRC-IAVTTTLSEEILKDAGPSLIRKDIGNISLSDI 290
|
Length = 1057 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 4e-12
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAD 231
I + +E PGV + E K G K+A+ + ++ V+ E E L L D
Sbjct: 17 IAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVL---------ELLEELG--LDD 65
Query: 232 CQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 291
V+ +NG + G KP+P + A K LG+ ++ L+V DS+
Sbjct: 66 YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLND 125
Query: 292 LQAATRAGMACV 303
++ A AG V
Sbjct: 126 IEMAKAAGGLGV 137
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 5e-12
Identities = 68/282 (24%), Positives = 108/282 (38%), Gaps = 75/282 (26%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++ + + A IFD DG++I+SE L +A D + SL D + L +
Sbjct: 2 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMA------------SLGVDISRREELPDT 49
Query: 122 IGGGKPKMR-------WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIK 174
+G +R WY + W V A++I LI++
Sbjct: 50 LG-----LRIDQVVDLWYAR-QPWNG---PSRQEVVQRIIARVISLIEE----------- 89
Query: 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQS 234
T PGV + KA G K+ + SA S + LE ++ M F+ D F A S
Sbjct: 90 --TRPLLPGVREALALCKAQGLKIGLASA----SPLHMLEAVLTM--FDLRDYFDA-LAS 140
Query: 235 YVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA 294
+ KP P +Y+ A +LG+ C+ +EDS G+ A
Sbjct: 141 AEKLPYS--------------------KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIA 180
Query: 295 ATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336
A A M ++ A + D L++V+L+ L L
Sbjct: 181 AKAARMRSIVV----PAPEQQNDPRWA---LADVKLESLTEL 215
|
Length = 222 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 1e-10
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD 314
GD+V++ KP P I++ AAKRL + +CLV+EDS+ G+ A AGM + +
Sbjct: 143 GDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHL 202
Query: 315 FKDAIAIYPDLSNVR 329
+ A + L +++
Sbjct: 203 YSSADEVINSLLDLQ 217
|
Length = 382 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 59.5 bits (144), Expect = 2e-10
Identities = 48/281 (17%), Positives = 91/281 (32%), Gaps = 58/281 (20%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL-NWDPEFYDVLQNQIG 123
++A++FD DG +++ + +A F+ V L + L+ +
Sbjct: 2 MMIKAILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGE-- 59
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
Y E+G + + D + +L+++ + + P
Sbjct: 60 --------YTGEYGLTLERLLELLERLLGD--EDAELVEELLAALAKLL------PDYPE 103
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
L + E K + + + L L ++ F+ + F+++
Sbjct: 104 ALEALKELGKKYKLGIL-TNGARPHQERKLRQLGLLDYFDAV--FISE------------ 148
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS---VIGLQAATRAGM 300
DV KPDP I+ A ++LG+ ++ L V DS I A GM
Sbjct: 149 -------------DVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDI--LGARALGM 193
Query: 301 -ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340
I PD L +L LL+ +
Sbjct: 194 KTVWINRGGKPLPDAL-----EAPDYEISSLAELLDLLERL 229
|
Length = 229 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
DDV+ KP P ++ A+ +G+ C+V ED+ G+QAA AGM V
Sbjct: 136 DDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAV 183
|
Length = 188 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 57.5 bits (139), Expect = 9e-10
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 29/140 (20%)
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
Y+++ T PGV + +A G ++ + + LE L + F
Sbjct: 75 HYEEVAGELT-SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS---- 129
Query: 228 FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED 287
VL+ GD + Q+KP P + AA+RLG++ + + V D
Sbjct: 130 --------VLIG---------------GDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGD 166
Query: 288 SVIGLQAATRAGM-ACVITY 306
S + +QAA AG + ++TY
Sbjct: 167 SRVDIQAARAAGCPSVLLTY 186
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 2e-09
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 321
KP+P + A +RLG+ ++C+++ DS + AA AG+ ++ T T +D + A
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERA-PG 62
Query: 322 YPDLSNVRLKDL 333
PD L DL
Sbjct: 63 RPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 2e-07
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 33/143 (23%)
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS-AATKSSVILCLENLIGM-ERFEG 224
Y + + G+ PGV + KAAG +AV + T L LE L G+ + F
Sbjct: 82 RHYAENVAGGSR-LYPGVKETLAALKAAGYPLAVVTNKPTPFVAPL-LEAL-GIADYFS- 137
Query: 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLV 284
V + GD + KKPDP+ + A ++LG+ ++ L
Sbjct: 138 -----------------------VVIG---GDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171
Query: 285 VEDSVIGLQAATRAGMACVI-TY 306
V DS +QAA AG V TY
Sbjct: 172 VGDSRNDIQAARAAGCPSVGVTY 194
|
Length = 226 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 255 GDD--VKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACVI 304
GDD VKQ KP P I++ AA+R + LV ED+ G++AA AGM+ V+
Sbjct: 128 GDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVM 182
|
Length = 220 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299
V V A + VK+ KP+P Y+ A+ LG++ ++C+VVED+ G+ + AG
Sbjct: 126 EVFVTAER---VKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAG 175
|
Length = 218 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 6e-06
Identities = 17/46 (36%), Positives = 32/46 (69%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
G D+++ KPDP++ AA+ + ++ ++C++V+DS G Q+ AGM
Sbjct: 135 GYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGM 180
|
Length = 221 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 2e-05
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
GD + ++KP P + AA+R+G++ DC+ V D + AA AGM V
Sbjct: 144 GDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSV 192
|
Length = 229 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 5e-05
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDP 112
LIFD DG I+++E HR+A+ + + ++ D + +LN P
Sbjct: 6 AGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSP 50
|
Length = 188 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 5e-05
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQ 313
+DV + KPDP +++ AA+RLG + C+V +S ++AA M CV + E
Sbjct: 158 AEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYEL 217
Query: 314 DFKD-AIAIYPDLSNVRLKDL 333
D + DLS V LK+L
Sbjct: 218 SAGDLVVRRLDDLSVVDLKNL 238
|
Length = 260 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 6e-05
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 306
GD + QKKPDP+ + K G+ L V DS + AA AG+ CV ++Y
Sbjct: 150 GDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY 202
|
Length = 272 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACV-ITYT-SSTA 311
++ +KP P I+ A KRLG+ ++ ++V D + ++ A GM V I SS
Sbjct: 143 SEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKM 202
Query: 312 EQDFKDAIAIYPDLSNVRLKDLELLL 337
E D YPD + L LL
Sbjct: 203 EDDVYP----YPD---YEISSLRELL 221
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 38/241 (15%), Positives = 65/241 (26%), Gaps = 89/241 (36%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC--------DPSSQQSLNW--DPEFYDVL 118
A++FD DG +++ + R+A+ F F + + L W E + L
Sbjct: 1 AILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEALEEL 60
Query: 119 QNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
Q IG + DL+ K + I S
Sbjct: 61 QGHIGYDAEEAYIPG-----------------------AADLLPRLKEAGIKLGIISNGS 97
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM 238
L G+ + +L
Sbjct: 98 LRA----------------------------QKLLLRKHGLGDYF----------ELILG 119
Query: 239 TNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298
D KP+P I++ A + LG+ + L V D++ ++ A A
Sbjct: 120 -----------------SDEIGSKPEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNA 161
Query: 299 G 299
G
Sbjct: 162 G 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 3e-04
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
G + + KP P Y+ A + L +S+ V EDSV G++A AGM V
Sbjct: 157 GSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205
|
Length = 248 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 8e-04
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 77/261 (29%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
++FD DGV+++S + R+A+ A+ +G G
Sbjct: 1 VVFDLDGVLVDSFAVMREAFAIAYREV-------------------------VGDGPAPF 35
Query: 130 RWYFKEHG--WPSSTIFDNPPVTDDDQAKLIDLIQDWKT----ERYQQIIKSGTVEPRPG 183
Y + G +P D +++ L + + E Y+ +G VE PG
Sbjct: 36 EEYRRHLGRYFP-------------DIMRIMGLPLEMEEPFVRESYRL---AGEVEVFPG 79
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
V L+ E +A G A+ + + LE L + F+ +V+ +
Sbjct: 80 VPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD-----------HVIGS---- 124
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
D+V + KP P I A + L + +D ++V D+V L +A AG A V
Sbjct: 125 ------------DEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATV 172
Query: 304 ITYTSSTAEQDFKDAIAIYPD 324
+ E D + +A PD
Sbjct: 173 ---AALWGEGDAGELLAARPD 190
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITYTSSTAEQDFKDAIA 320
KP P+IY A ++LG+ + L+V D + + A AG+ ++ T ++ +D A
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-E 248
Query: 321 IYPDL 325
+ P
Sbjct: 249 VKPTY 253
|
Length = 269 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNV 98
++A+ FDCDG +++SE + +AY F+ F +
Sbjct: 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGI 35
|
Length = 221 |
| >gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Score = 37.0 bits (86), Expect = 0.003
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 245 PNRVCVCAHQGDDVKQ-KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+ V C H D +KP P + + A KRLG+ LVV D + LQAA AG+A V
Sbjct: 83 VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142
Query: 304 IT 305
+
Sbjct: 143 LL 144
|
This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 38.3 bits (89), Expect = 0.004
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+DV + KPDP +++ AA+ L + C+V +S ++AA A M CV
Sbjct: 266 EDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313
|
Length = 381 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 100.0 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.97 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.97 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.96 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.96 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.96 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.96 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.96 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.96 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.96 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.96 | |
| PLN02940 | 382 | riboflavin kinase | 99.95 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.95 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.94 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.94 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.94 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.94 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.93 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.93 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.93 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.92 | |
| PLN02811 | 220 | hydrolase | 99.92 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.91 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.91 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.9 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.89 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.89 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.89 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.88 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.88 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.88 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.88 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.84 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.84 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.82 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.82 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.82 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.82 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.81 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.81 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.8 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.77 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.77 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.77 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.76 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.76 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.74 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.73 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.72 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.71 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.69 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.68 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.68 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.68 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.67 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.66 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.65 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.64 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.62 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.61 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.6 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.58 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.57 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.57 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.56 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.56 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.56 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.55 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.54 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.54 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.52 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.5 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.49 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.49 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.46 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.46 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.42 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.42 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.4 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.39 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.38 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.38 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.37 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.37 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.35 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.33 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.33 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.32 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.27 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.27 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.26 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.24 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.22 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.22 | |
| PLN02887 | 580 | hydrolase family protein | 99.21 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.21 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.19 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.18 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.16 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.15 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.14 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.12 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.05 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.04 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.03 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.0 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.96 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.96 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.95 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 98.95 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.93 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.93 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.89 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.87 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.85 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.78 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.73 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.67 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.63 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.61 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.56 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.55 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.53 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.53 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.46 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.41 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.36 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.36 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.33 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.32 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.31 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.3 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.29 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.27 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.27 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.26 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.25 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.2 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.19 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.17 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.13 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.13 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.12 | |
| PLN02423 | 245 | phosphomannomutase | 98.04 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.02 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 97.86 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.75 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.69 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 97.68 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.65 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.63 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.6 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.57 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.53 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.49 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.42 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.41 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.39 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.36 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.35 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.3 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.3 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.27 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.26 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.2 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.18 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.18 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.16 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.1 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 97.1 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.08 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.06 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 96.79 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.75 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.57 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 96.57 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.54 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.28 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 96.27 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.2 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.16 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.13 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 96.12 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.05 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.01 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.92 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.84 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 95.78 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 95.77 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.68 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 95.39 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 94.64 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 94.14 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.05 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 93.71 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 93.68 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 93.63 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 93.53 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.5 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 92.19 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 91.24 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 90.9 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 90.18 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 90.15 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 89.07 | |
| PLN02580 | 384 | trehalose-phosphatase | 88.89 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 88.72 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 88.39 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 88.25 | |
| PF05690 | 247 | ThiG: Thiazole biosynthesis protein ThiG; InterPro | 87.37 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 86.92 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 86.04 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 85.7 | |
| CHL00162 | 267 | thiG thiamin biosynthesis protein G; Validated | 85.59 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 85.42 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 84.36 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 83.57 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 83.4 | |
| PRK11840 | 326 | bifunctional sulfur carrier protein/thiazole synth | 82.91 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 81.25 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 81.06 | |
| cd04728 | 248 | ThiG Thiazole synthase (ThiG) is the tetrameric en | 80.43 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 80.39 |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=254.89 Aligned_cols=242 Identities=53% Similarity=0.923 Sum_probs=186.5
Q ss_pred CCCCccEEEEecCccccccc-hhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 141 (344)
....+++|||||||||+|+. ..+.++|.+++.++|++.. .|..+.+..+.. +|.+...+.+++...+++..
T Consensus 36 ~~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~-------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 107 (286)
T PLN02779 36 ASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPV-------EWDVELYDELLN-IGGGKERMTWYFNENGWPTS 107 (286)
T ss_pred cccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCC-------CCCHHHHHHHHc-cCCChHHHHHHHHHcCCCcc
Confidence 34568999999999999999 9999999999999998421 133444444444 67666666666666666533
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
+. ...+..++..++..+.+.+.+.+.|...+....+.++||+.++|+.|+++|++++|+||+....+...++.+.+...
T Consensus 108 ~~-~~~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~ 186 (286)
T PLN02779 108 TI-EKAPKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPER 186 (286)
T ss_pred cc-ccCCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccc
Confidence 22 11222233334445556666666777665544568999999999999999999999999999888888877532233
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+..++.+ . +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.
T Consensus 187 ~~~~~~v-~------------------------~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~ 241 (286)
T PLN02779 187 AQGLDVF-A------------------------GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMR 241 (286)
T ss_pred cCceEEE-e------------------------ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCE
Confidence 3223444 5 78888899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+|++.++....+.+..++++++++.++...++..++-
T Consensus 242 ~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~~~~~ 278 (286)
T PLN02779 242 CIVTKSSYTADEDFSGADAVFDCLGDVPLEDFDLLFC 278 (286)
T ss_pred EEEEccCCccccccCCCcEEECChhhcchhhhHHHHH
Confidence 9999888776666777899999999999999987754
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-29 Score=224.86 Aligned_cols=216 Identities=24% Similarity=0.365 Sum_probs=163.0
Q ss_pred CCCccEEEEecCccccccc-hhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESE-HLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~-~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
...+|+|||||||||+|+. ..+.++|.+++.++|++... .+.++...|.........+. ++.
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~------------~e~~~~~~G~~~~~~~~~l~--~~~--- 83 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPP------------AFLLKRAEGMKNEQAISEVL--CWS--- 83 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHh--ccC---
Confidence 3579999999999999996 56778999999999987543 12234455665554333221 111
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
...+ ....+...+...+... ......++||+.++|+.|+++|++++|+||+....++..++++ ++..+
T Consensus 84 ------~~~~----~~~~l~~~~~~~~~~~-~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~ 151 (260)
T PLN03243 84 ------RDFL----QMKRLAIRKEDLYEYM-QGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV-GMEGF 151 (260)
T ss_pred ------CCHH----HHHHHHHHHHHHHHHH-HccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc-CCHhh
Confidence 0111 1233333344444322 2245689999999999999999999999999999999999997 77777
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ ++++..+||+|++|..+++++|+++++|+||||+..|+++|+++||.+
T Consensus 152 --Fd~ii~------------------------~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 152 --FSVVLA------------------------AEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred --CcEEEe------------------------cccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEE
Confidence 788988 899988999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 303 VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 303 v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
|++. +......+..+++++.++.++....+..
T Consensus 206 i~v~-g~~~~~~l~~ad~vi~~~~el~~~~~~~ 237 (260)
T PLN03243 206 VAVA-GKHPVYELSAGDLVVRRLDDLSVVDLKN 237 (260)
T ss_pred EEEe-cCCchhhhccCCEEeCCHHHHHHHHHhh
Confidence 9997 4444455556777777777765544443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=230.25 Aligned_cols=218 Identities=22% Similarity=0.291 Sum_probs=170.7
Q ss_pred CCccEEEEecCccccccch-hHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
..+++|||||||||+|+.. .+.++|.+++.++|++... ...++...|.+.......+.....
T Consensus 129 ~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~------------~e~~~~~~G~~~~~~l~~ll~~~~----- 191 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPP------------AFILRRVEGMKNEQAISEVLCWSR----- 191 (381)
T ss_pred CCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCH------------HHHHHHhcCCCHHHHHHHHhhccC-----
Confidence 4689999999999999986 6667999999999987543 223455566665554332211110
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
++. ..+.+.+.+.+.|.+... ....++||+.++|+.|+++|++++|+||.....++..++.+ ++..+
T Consensus 192 ------~~~----~~e~l~~~~~~~y~~~~~-~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l-gL~~y- 258 (381)
T PLN02575 192 ------DPA----ELRRMATRKEEIYQALQG-GIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI-GIRGF- 258 (381)
T ss_pred ------CHH----HHHHHHHHHHHHHHHHhc-cCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCHHH-
Confidence 111 133444555666655543 34689999999999999999999999999999999999997 88887
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++...||+|++|..+++++|+.|++|+||||+..|+++|+++||.+|
T Consensus 259 -Fd~Iv~------------------------sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~I 313 (381)
T PLN02575 259 -FSVIVA------------------------AEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCV 313 (381)
T ss_pred -ceEEEe------------------------cCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEE
Confidence 799988 8998889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
++.++.. ...+..+++++.++.++.+..|..+..
T Consensus 314 gV~~~~~-~~~l~~Ad~iI~s~~EL~~~~l~~l~~ 347 (381)
T PLN02575 314 AVASKHP-IYELGAADLVVRRLDELSIVDLKNLAD 347 (381)
T ss_pred EECCCCC-hhHhcCCCEEECCHHHHHHHHHhhhhh
Confidence 9987543 334556788899999888777766554
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-29 Score=223.02 Aligned_cols=215 Identities=24% Similarity=0.364 Sum_probs=159.1
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
..++|+|+|||||||+|+...+.++|.+++.++|..... .+..+. ..+...|.+..... .... +
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~------~~~~~~--~~~~~~G~~~~~~~---~~~~-~---- 82 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGV------PITEEF--FVENIAGKHNEDIA---LGLF-P---- 82 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCC------CCCHHH--HHHHcCCCCHHHHH---HHHc-C----
Confidence 456899999999999999999999999999999754110 011111 12233444433322 2110 0
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
. ..+. ...+...+...|..... ....++||+.++|+.|+++|++++|+||+....++..++++ ++..+
T Consensus 83 --~---~~~~----~~~~~~~~~~~y~~~~~-~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~-gl~~~- 150 (248)
T PLN02770 83 --D---DLER----GLKFTDDKEALFRKLAS-EQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL-GLSDF- 150 (248)
T ss_pred --c---chhh----HHHHHHHHHHHHHHHHH-hcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CChhh-
Confidence 0 0001 11122233444444432 34789999999999999999999999999999999999997 78777
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++..+||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|
T Consensus 151 -Fd~iv~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i 205 (248)
T PLN02770 151 -FQAVII------------------------GSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVV 205 (248)
T ss_pred -CcEEEe------------------------cCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEE
Confidence 788888 9999899999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhc-cccccccCCccccCHH
Q 019226 304 ITYTSSTAEQDF-KDAIAIYPDLSNVRLK 331 (344)
Q Consensus 304 ~v~~~~~~~~~l-~~~~~~~~~~~~~~~~ 331 (344)
++.++....... ..+++++.++.++++.
T Consensus 206 ~v~~g~~~~~l~~~~a~~vi~~~~e~~~~ 234 (248)
T PLN02770 206 GLTTRNPESLLMEAKPTFLIKDYEDPKLW 234 (248)
T ss_pred EEeCCCCHHHHhhcCCCEEeccchhhHHH
Confidence 998875432222 3578889998885543
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=214.59 Aligned_cols=204 Identities=19% Similarity=0.288 Sum_probs=155.4
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH-hhCCChhhH-HHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-QIGGGKPKM-RWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (344)
+|+|+||+||||+|+.+.+.++|.++++++|.+.+. .++.. ..|.....+ ..++...|.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~----- 62 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTP-------------EEVQSAWMGQSKIEAIRALLALDGAD----- 62 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCH-------------HHHHHhhcCCCHHHHHHHHHhccCCC-----
Confidence 589999999999999999999999999999987543 22223 445554443 3333343422
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc--hh
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME--RF 222 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~--~~ 222 (344)
.+. .+.+...+.+.+...+......++||+.++|+.|+++|++++|+||+....+...++.+ ++. .+
T Consensus 63 ------~~~----~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~~ 131 (220)
T TIGR03351 63 ------EAE----AQAAFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL-GWTVGDD 131 (220)
T ss_pred ------HHH----HHHHHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh-hhhhhcc
Confidence 111 23333333444444433344689999999999999999999999999999999999987 776 55
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCe
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
|+.+++ +++....||+|++|..+++++|+. |++|+||||+..|+++|+++||.
T Consensus 132 --f~~i~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~ 185 (220)
T TIGR03351 132 --VDAVVC------------------------PSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAG 185 (220)
T ss_pred --CCEEEc------------------------CCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCC
Confidence 688888 888888999999999999999997 79999999999999999999999
Q ss_pred E-EEEeCCCchhhhcc--ccccccCCc
Q 019226 302 C-VITYTSSTAEQDFK--DAIAIYPDL 325 (344)
Q Consensus 302 ~-v~v~~~~~~~~~l~--~~~~~~~~~ 325 (344)
+ |++.++......+. .+++++.++
T Consensus 186 ~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 186 AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 9 89988766554442 345555444
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=214.80 Aligned_cols=210 Identities=18% Similarity=0.273 Sum_probs=157.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++++|+||+||||+|+...+.++|.+++.+++..... .+++....|.+... .+...+
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~------------~~~~~~~~G~~~~~---~~~~~~------- 58 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYK------------REDVLPFIGPSLHD---TFSKID------- 58 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCcCHHH---HHHhcC-------
Confidence 36899999999999999999999999999998764221 22344455544322 222211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
+... +.+...+.+.+..... ....++||+.++|+.|+++|++++|+||+....+...++.+ ++..+
T Consensus 59 ------~~~~----~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~-- 124 (214)
T PRK13288 59 ------ESKV----EEMITTYREFNHEHHD-ELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT-GLDEF-- 124 (214)
T ss_pred ------HHHH----HHHHHHHHHHHHHhhh-hhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhc--
Confidence 1121 2222223333332221 34689999999999999999999999999999999999997 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++...||+|++|..+++++|+++++|+||||+.+|+++|+++|+.+|+
T Consensus 125 f~~i~~------------------------~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 125 FDVVIT------------------------LDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred eeEEEe------------------------cCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEE
Confidence 688888 88888899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCccccCHHHHHHHHHH
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+.++......+. .++++++ ++.+|.++++.
T Consensus 181 v~~g~~~~~~l~~~~~~~~i~-----~~~~l~~~i~~ 212 (214)
T PRK13288 181 VAWTIKGREYLEQYKPDFMLD-----KMSDLLAIVGD 212 (214)
T ss_pred EcCCCCCHHHHhhcCcCEEEC-----CHHHHHHHHhh
Confidence 988865544432 3445554 45566666554
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=218.07 Aligned_cols=190 Identities=23% Similarity=0.283 Sum_probs=145.0
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
.++|+|+||+||||+|+...+.++++++++++|.+... .+.+....|.+...... .....
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~---~~~~~----- 69 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPIT------------LAQLRPVVSKGARAMLA---VAFPE----- 69 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhhhHHHHHHH---HHhcc-----
Confidence 45799999999999999999999999999999986322 23344445544333222 11100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
...+..++.. +.+.+.|..... ....++||+.++|+.|+++|++++++||+........++.+ ++..+
T Consensus 70 ----~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~-~l~~~-- 137 (229)
T PRK13226 70 ----LDAAARDALI----PEFLQRYEALIG-TQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL-GWEQR-- 137 (229)
T ss_pred ----CChHHHHHHH----HHHHHHHHHhhh-hcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-Cchhc--
Confidence 1112222222 333344443322 23689999999999999999999999999998888888886 66655
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++|+.+|+
T Consensus 138 f~~i~~------------------------~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~ 193 (229)
T PRK13226 138 CAVLIG------------------------GDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVA 193 (229)
T ss_pred ccEEEe------------------------cCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEE
Confidence 677777 78888899999999999999999999999999999999999999999999
Q ss_pred EeCCCc
Q 019226 305 TYTSST 310 (344)
Q Consensus 305 v~~~~~ 310 (344)
+.++..
T Consensus 194 v~~g~~ 199 (229)
T PRK13226 194 ALWGYR 199 (229)
T ss_pred EeecCC
Confidence 988765
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=216.36 Aligned_cols=217 Identities=30% Similarity=0.482 Sum_probs=165.0
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHH-HHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 144 (344)
++++|||||||||+|++..+.++|.+++.++|+..+. +......|.........+ +..+....
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 64 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISD-------------EEIRELHGGGIARIIDLLRKLAAGEDP--- 64 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHCCChHHHHHHHHHHhcCCcc---
Confidence 4799999999999999999999999999999988653 234444555544433333 33221100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+. ....+...+.... ......+.||+.++|++|+++|++++++|++.+..++..++.+ ++.++
T Consensus 65 -------~~~----~~~~~~~~~~~~~--~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~-gl~~~-- 128 (221)
T COG0637 65 -------ADL----AELERLLYEAEAL--ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL-GLLDY-- 128 (221)
T ss_pred -------cCH----HHHHHHHHHHHHh--hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc-cChhh--
Confidence 000 1111111111111 1245799999999999999999999999999999999999997 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++..+||+|++|..++++||+.|++|++|+|+.+++++|++|||.+|+
T Consensus 129 f~~~v~------------------------~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 129 FDVIVT------------------------ADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred cchhcc------------------------HHHHhcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 688888 89999999999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 305 v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+..+... ...........+....++.++...+.+
T Consensus 185 v~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 218 (221)
T COG0637 185 VPAGHDR-PHLDPLDAHGADTVLLDLAELPALLEA 218 (221)
T ss_pred ecCCCCc-cccchhhhhhcchhhccHHHHHHHHHh
Confidence 9873332 234445667778888888888877664
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=214.38 Aligned_cols=210 Identities=23% Similarity=0.384 Sum_probs=157.3
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHH-HHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 143 (344)
.++|+|+||+||||+|+...+..++.+++.++|.+... .+.+...+|......... ....++.
T Consensus 5 ~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~---- 68 (222)
T PRK10826 5 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISR------------REELPDTLGLRIDQVVDLWYARQPWN---- 68 (222)
T ss_pred ccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCH------------HHHHHHhhCCCHHHHHHHHHHhcCCC----
Confidence 46899999999999999999999999999999986432 123445555554443332 2222221
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
........+.+.+. +...+. ....++||+.++|+.|+++|++++|+||+....++..++.+ ++..+
T Consensus 69 -------~~~~~~~~~~~~~~----~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~- 134 (222)
T PRK10826 69 -------GPSRQEVVQRIIAR----VISLIE-ETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF-DLRDY- 134 (222)
T ss_pred -------CCCHHHHHHHHHHH----HHHHHh-cCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC-cchhc-
Confidence 11112222222222 222222 34689999999999999999999999999999999999986 77777
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++.+||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|
T Consensus 135 -f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 135 -FDALAS------------------------AEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred -ccEEEE------------------------cccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 688888 8888899999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhh-hccccccccCCccccC
Q 019226 304 ITYTSSTAEQ-DFKDAIAIYPDLSNVR 329 (344)
Q Consensus 304 ~v~~~~~~~~-~l~~~~~~~~~~~~~~ 329 (344)
++..+....+ ....++.++.++.++.
T Consensus 190 ~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 190 VVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred EecCCccCchhhhhhhheeccCHHHHh
Confidence 9988765432 2233555666655554
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=209.50 Aligned_cols=214 Identities=24% Similarity=0.396 Sum_probs=164.6
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHH-HHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWY-FKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 143 (344)
+++++|+||+||||+|+...+..+++.+++++|.+... ...+....|.+....... +.....
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ig~~~~~~~~~~~~~~~~----- 64 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLD------------EEEIRQLIGLGLDELIERLLGEADE----- 64 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhcCCHHHHHHHHhccccc-----
Confidence 67899999999999999999999999999999998533 355666677766544332 222111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
+......+.+.+.+.+.+.+.. ...++||+.++|+.|+++|++++|+||.....++..++++ ++..+
T Consensus 65 --------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~-gl~~~- 131 (220)
T COG0546 65 --------EAAAELVERLREEFLTAYAELL---ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL-GLADY- 131 (220)
T ss_pred --------hhHHHHHHHHHHHHHHHHHhhc---cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh-CCccc-
Confidence 1111334444444444444432 2579999999999999999999999999999999999997 88887
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++....||+|..+..+++++|++|++++||||+.+|+++|++||+.+|
T Consensus 132 -F~~i~g------------------------~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 132 -FDVIVG------------------------GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred -cceEEc------------------------CCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEE
Confidence 788887 7888889999999999999999998899999999999999999999999
Q ss_pred EEeCCCchhhhc--cccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
.|.++....+.+ ..+++++. ++.+|...++
T Consensus 187 ~v~~g~~~~~~l~~~~~d~vi~-----~~~el~~~l~ 218 (220)
T COG0546 187 GVTWGYNSREELAQAGADVVID-----SLAELLALLA 218 (220)
T ss_pred EEECCCCCCcchhhcCCCEEEC-----CHHHHHHHHh
Confidence 999987532222 33455554 4455555544
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=216.13 Aligned_cols=191 Identities=24% Similarity=0.354 Sum_probs=142.3
Q ss_pred ccEEEEecCccccccchh-HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-----------HHHHH
Q 019226 67 LQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-----------RWYFK 134 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 134 (344)
+|+|+|||||||+|+... +..++.+++.++|.+.+. +++...+|.+.... ..+..
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 68 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITL-------------EEARGPMGLGKWDHIRALLKMPAVAERWRA 68 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccH-------------HHHHHhcCccHHHHHHHHhcCHHHHHHHHH
Confidence 689999999999998653 578999999999976432 23333444443221 11222
Q ss_pred HcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 135 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
.+|.+ .+.+. .+.+.+.+.+.+..... ....++||+.++|+.|+++|++++|+||+....++.+++
T Consensus 69 ~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~ 134 (253)
T TIGR01422 69 KFGRL---------PTEAD----IEAIYEAFEPLQLAKLA-EYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAP 134 (253)
T ss_pred HhCCC---------CCHHH----HHHHHHHHHHHHHHHHH-hcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 23321 11122 22233333333333322 346899999999999999999999999999999999999
Q ss_pred HhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHH
Q 019226 215 NLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQ 293 (344)
Q Consensus 215 ~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~ 293 (344)
.+ ++..+. ++.+++ ++++...||+|++|..+++++|+. |++|+||||+.+|++
T Consensus 135 ~~-gl~~~f-~d~ii~------------------------~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~ 188 (253)
T TIGR01422 135 EA-ALQGYR-PDYNVT------------------------TDDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIE 188 (253)
T ss_pred HH-HhcCCC-CceEEc------------------------cccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHH
Confidence 87 666652 377887 888888999999999999999995 999999999999999
Q ss_pred HHHHcCCeEEEEeCCCc
Q 019226 294 AATRAGMACVITYTSST 310 (344)
Q Consensus 294 ~a~~aG~~~v~v~~~~~ 310 (344)
+|+++||.+|+|.++..
T Consensus 189 aA~~aGi~~i~v~~g~~ 205 (253)
T TIGR01422 189 EGRNAGMWTVGLILSSN 205 (253)
T ss_pred HHHHCCCeEEEEecCCc
Confidence 99999999999988764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=216.05 Aligned_cols=194 Identities=25% Similarity=0.347 Sum_probs=141.7
Q ss_pred CCCccEEEEecCccccccchh-HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHH---------
Q 019226 64 SQSLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWY--------- 132 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------- 132 (344)
++++|+|+||+||||+|+... +..+|.+++.++|.+.+. +++...+|.+... +...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~ 67 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITL-------------EEARGPMGLGKWDHIRALLKMPRVAAR 67 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHhcHHHHHH
Confidence 356899999999999998654 468999999999976432 2333444444322 1111
Q ss_pred -HHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 133 -FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 133 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
...+|.+ .+.++. +.+...+.+.+...+. ....++||+.++|+.|+++|++++|+||.....+..
T Consensus 68 ~~~~~g~~---------~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~ 133 (267)
T PRK13478 68 WQAVFGRL---------PTEADV----DALYAAFEPLQIAKLA-DYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDV 133 (267)
T ss_pred HHHHhCCC---------CCHHHH----HHHHHHHHHHHHHHHh-hcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHH
Confidence 1122211 111222 2222333333333322 346899999999999999999999999999998888
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHh
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVI 290 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~ 290 (344)
.++.+ ++..+. ++.+++ ++++...||+|++|..+++++|+. +++|+||||+.+
T Consensus 134 ~l~~~-~l~~~~-~d~i~~------------------------~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~ 187 (267)
T PRK13478 134 VVPLA-AAQGYR-PDHVVT------------------------TDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVP 187 (267)
T ss_pred HHHHH-hhcCCC-ceEEEc------------------------CCcCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHH
Confidence 88886 554442 377777 888888999999999999999996 699999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCc
Q 019226 291 GLQAATRAGMACVITYTSST 310 (344)
Q Consensus 291 Di~~a~~aG~~~v~v~~~~~ 310 (344)
|+++|+++|+.+|+|.++..
T Consensus 188 Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 188 GIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred HHHHHHHCCCEEEEEccCcc
Confidence 99999999999999988765
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=210.12 Aligned_cols=204 Identities=22% Similarity=0.354 Sum_probs=152.6
Q ss_pred EEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccccCCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 148 (344)
|+||+||||+|+...+.+++.+++.++|.+... ...+....|.+.... ..++...+..
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~--------- 59 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPAT------------LARVIGFIGNGVPVLMERVLAWAGQE--------- 59 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhcccHHHHHHHHhhccccc---------
Confidence 699999999999999999999999999986322 223444455554433 2333333321
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
.+.+. .+.+.+.+.+.|..... ....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+
T Consensus 60 ~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~~ 131 (213)
T TIGR01449 60 PDAQR----VAELRKLFDRHYEEVAG-ELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKY--FSVL 131 (213)
T ss_pred cChHH----HHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CcHhh--CcEE
Confidence 11111 23334444444554432 24689999999999999999999999999999999999997 77766 6888
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++ ++++...||+|++|..+++++|+++++|++|||+.+|+++|+++|+.++++.++
T Consensus 132 ~~------------------------~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g 187 (213)
T TIGR01449 132 IG------------------------GDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYG 187 (213)
T ss_pred Ee------------------------cCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccC
Confidence 87 888888999999999999999999999999999999999999999999999887
Q ss_pred Cchhhhc--cccccccCCcc
Q 019226 309 STAEQDF--KDAIAIYPDLS 326 (344)
Q Consensus 309 ~~~~~~l--~~~~~~~~~~~ 326 (344)
......+ ..+++++.++.
T Consensus 188 ~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 188 YRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred CCCCcchhhcCCCeEeCCHH
Confidence 6543333 23455554443
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-27 Score=210.17 Aligned_cols=204 Identities=17% Similarity=0.324 Sum_probs=147.3
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh-hCCChhhHHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ-IGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
|++|+|+|||||||+|+...+..+++++++++|++. ..+... .|.+.... ++.+...
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~---------------~~~~~~~~g~~~~~~---~~~~~~~---- 58 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP---------------DEVLNFIHGKQAITS---LRHFMAG---- 58 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH---------------HHHHHHHcCCCHHHH---HHHHhcc----
Confidence 468999999999999999999999999999999752 122222 34443332 2221100
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
...+ +..+.+... ..+.... .....++||+.++|+.|+++|++++|+||+........++.. ++..
T Consensus 59 -----~~~~---~~~~~~~~~--~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~-~l~~-- 124 (218)
T PRK11587 59 -----ASEA---EIQAEFTRL--EQIEATD-TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA-GLPA-- 124 (218)
T ss_pred -----CCcH---HHHHHHHHH--HHHHHhh-hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc-CCCC--
Confidence 0111 111222111 1111111 245689999999999999999999999999887776666665 5533
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.+++ ++++...||+|++|..+++++|+.|++|+||||+..|+++|+++|+.+|
T Consensus 125 -~~~i~~------------------------~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i 179 (218)
T PRK11587 125 -PEVFVT------------------------AERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVI 179 (218)
T ss_pred -ccEEEE------------------------HHHhcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEE
Confidence 466666 7788889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRL 330 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (344)
++.++... ..+..+++++.++.++..
T Consensus 180 ~v~~~~~~-~~~~~~~~~~~~~~el~~ 205 (218)
T PRK11587 180 AVNAPADT-PRLDEVDLVLHSLEQLTV 205 (218)
T ss_pred EECCCCch-hhhccCCEEecchhheeE
Confidence 99876532 334457778888777654
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=224.42 Aligned_cols=211 Identities=21% Similarity=0.374 Sum_probs=164.4
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 143 (344)
..+++|+||+||||+|+...+.+++.+++.++|.+... +++...+|..... ...++..++.+.
T Consensus 9 ~~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~--- 72 (382)
T PLN02940 9 KLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDG-------------REAQKIVGKTPLEAAATVVEDYGLPC--- 72 (382)
T ss_pred ccCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC---
Confidence 44899999999999999999999999999999976432 2345556665544 344555555431
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+++.+.+.+.+ .... ....++||+.++|+.|+++|++++|+||.....+...++...++..+
T Consensus 73 ---------~~~~~~~~~~~~~----~~~~--~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~- 136 (382)
T PLN02940 73 ---------STDEFNSEITPLL----SEQW--CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES- 136 (382)
T ss_pred ---------CHHHHHHHHHHHH----HHHH--ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-
Confidence 1222222333222 2222 24689999999999999999999999999998888888733377666
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ ++++...||+|++|..+++++|++|++|++|||+..|+++|+++||.+|
T Consensus 137 -Fd~ii~------------------------~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 137 -FSVIVG------------------------GDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred -CCEEEe------------------------hhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 789988 8999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHH
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
++.++.........++..++++.++...+
T Consensus 192 ~v~~g~~~~~~~~~ad~~i~sl~el~~~~ 220 (382)
T PLN02940 192 AVPSIPKQTHLYSSADEVINSLLDLQPEK 220 (382)
T ss_pred EECCCCcchhhccCccEEeCCHhHcCHHH
Confidence 99887654444566788888888876554
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=211.14 Aligned_cols=217 Identities=22% Similarity=0.305 Sum_probs=158.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 143 (344)
..+|+|+|||||||+|+...+..++.+++.++|.+... .+.+....|.+...+.. .+...
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~l~~~------- 71 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAG------------LEAVRHWVGNGAPVLVRRALAGS------- 71 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhChhHHHHHHHHhccc-------
Confidence 46889999999999999999999999999999986433 23344455555443322 21110
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
+.....++. ..+.+.+.+.+.|... .....++||+.++|+.|+++|++++|+||+....++..++.+ ++..+
T Consensus 72 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~-~i~~~- 143 (272)
T PRK13223 72 IDHDGVDDE----LAEQALALFMEAYADS--HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM-KIGRY- 143 (272)
T ss_pred ccccCCCHH----HHHHHHHHHHHHHHhc--CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc-CcHhh-
Confidence 001111111 2233334444444432 123578999999999999999999999999998888888886 77776
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++..||+|++|+.+++++|+++++|++|||+.+|+++|+++|+.++
T Consensus 144 -f~~i~~------------------------~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i 198 (272)
T PRK13223 144 -FRWIIG------------------------GDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCV 198 (272)
T ss_pred -CeEEEe------------------------cCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 677777 8888889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhcc--ccccccCCccccCHHHHHHHHH
Q 019226 304 ITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 304 ~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+|.++......+. .+++++.+ +.+|.+++.
T Consensus 199 ~v~~G~~~~~~l~~~~~~~vi~~-----l~el~~~~~ 230 (272)
T PRK13223 199 ALSYGYNHGRPIAEESPALVIDD-----LRALLPGCA 230 (272)
T ss_pred EEecCCCCchhhhhcCCCEEECC-----HHHHHHHHh
Confidence 9988765444432 35555544 444544443
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-26 Score=199.78 Aligned_cols=200 Identities=26% Similarity=0.397 Sum_probs=149.0
Q ss_pred EEEecCccccccchhHHHHHHHHHHh-cCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccCCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (344)
|+|||||||+|+...+.+++++++.+ +|.+... .+.+....|.... ..++..|.+
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~---~~~~~~~~~--------- 56 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAP------------FEEYRRHLGRYFP---DIMRIMGLP--------- 56 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCC------------HHHHHHHhCccHH---HHHHHcCCC---------
Confidence 68999999999999999999999998 4764322 2334444554433 333333322
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
... .+.+ ..+.+. . .....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+
T Consensus 57 --~~~----~~~~---~~~~~~-~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-~l~~~--f~~i 121 (205)
T TIGR01454 57 --LEM----EEPF---VRESYR-L--AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL-GLLPL--FDHV 121 (205)
T ss_pred --HHH----HHHH---HHHHHH-h--hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc-CChhh--eeeE
Confidence 010 0111 111121 1 145789999999999999999999999999999899989886 77766 6778
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++ +++...+||++++|..+++++|+++++|+||||+.+|+++|+++|+.+|++.++
T Consensus 122 ~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g 177 (205)
T TIGR01454 122 IG------------------------SDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWG 177 (205)
T ss_pred Ee------------------------cCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEec
Confidence 77 788888999999999999999999999999999999999999999999999988
Q ss_pred Cchhhhcc--ccccccCCccccCHHHHHHHH
Q 019226 309 STAEQDFK--DAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 309 ~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll 337 (344)
....+.+. .+++++.+ +.+|..++
T Consensus 178 ~~~~~~l~~~~~~~~~~~-----~~~l~~~~ 203 (205)
T TIGR01454 178 EGDAGELLAARPDFLLRK-----PQSLLALC 203 (205)
T ss_pred CCChhhhhhcCCCeeeCC-----HHHHHHHh
Confidence 76655553 34555544 44554444
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=196.86 Aligned_cols=182 Identities=29% Similarity=0.522 Sum_probs=137.1
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (344)
+|+||+||||+|+...+..++.+++.++|++... . ......+.+... +...+.+.|.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~----------~---~~~~~~g~~~~~~~~~~~~~~~~~-------- 59 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDE----------E---FNESLKGVSREDSLERILDLGGKK-------- 59 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCH----------H---HHHHhcCCChHHHHHHHHHhcCCC--------
Confidence 5899999999999999999999999999986332 1 223334444433 34455555542
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc
Q 019226 148 PVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (344)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d 226 (344)
.+++...++. +.+.+.|.+.+.. ....++||+.++|+.|+++|++++|+||+.. ....++.+ ++..+ |+
T Consensus 60 -~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~-~l~~~--f~ 129 (185)
T TIGR01990 60 -YSEEEKEELA----ERKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL-GLIDY--FD 129 (185)
T ss_pred -CCHHHHHHHH----HHHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc-CcHhh--Cc
Confidence 1222222222 2233333333221 2357899999999999999999999999754 45677776 77766 68
Q ss_pred eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.+++ +++++..||+|++|..+++++++++++|+||||+.+|+++|+++||.+|+|
T Consensus 130 ~~~~------------------------~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 130 AIVD------------------------PAEIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred EEEe------------------------hhhcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 8888 888889999999999999999999999999999999999999999999986
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=204.22 Aligned_cols=192 Identities=21% Similarity=0.367 Sum_probs=135.1
Q ss_pred CccEEEEecCccccccchhHHHHHHHHH---HhcCCCCCCCccCCCCCChHHHHHHHH---hhCCChhh-HHHHHHHcCC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAF---SHFNVRCDPSSQQSLNWDPEFYDVLQN---QIGGGKPK-MRWYFKEHGW 138 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~g~ 138 (344)
|+++|+||+||||+|+...+.+++..+. .++|++.+. .+.+..+.. ..+..... ....+...+.
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDF---------EEAYEELLKLIKEYGSNYPTHFDYLIRRLWE 71 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCH---------HHHHHHHHHHHHHhccccCcchHHHHHHHhh
Confidence 4789999999999999988877776554 456665332 122222211 11111111 1111111110
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc
Q 019226 139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218 (344)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~ 218 (344)
. ... +.+.+.....+... .....++||+.++|+.|+++|++++|+||+....+...++.+ +
T Consensus 72 ~------------~~~----~~~~~~~~~~~~~~--~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~-~ 132 (221)
T TIGR02253 72 E------------YNP----KLVAAFVYAYHKLK--FAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL-G 132 (221)
T ss_pred h------------cCH----HHHHHHHHHHHHHH--HHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC-C
Confidence 0 000 11111111111111 123689999999999999999999999999988889899886 7
Q ss_pred cchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHH
Q 019226 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATR 297 (344)
Q Consensus 219 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~ 297 (344)
+..+ |+.+++ +++++..||+|++|..+++++|+++++|+||||+. +|+.+|++
T Consensus 133 l~~~--f~~i~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~ 186 (221)
T TIGR02253 133 VRDF--FDAVIT------------------------SEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKN 186 (221)
T ss_pred hHHh--ccEEEE------------------------eccCCCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHH
Confidence 7776 688888 89999999999999999999999999999999998 89999999
Q ss_pred cCCeEEEEeCCCch
Q 019226 298 AGMACVITYTSSTA 311 (344)
Q Consensus 298 aG~~~v~v~~~~~~ 311 (344)
+|+.+|++.++...
T Consensus 187 aG~~~i~~~~~~~~ 200 (221)
T TIGR02253 187 LGMKTVWINQGKSS 200 (221)
T ss_pred CCCEEEEECCCCCc
Confidence 99999999887653
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=199.63 Aligned_cols=217 Identities=24% Similarity=0.337 Sum_probs=159.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHH-HHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 142 (344)
.+++++|+||+||||+|+...+..++.+++.++|.+... ...+....+.+...+. ..+...+.
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~---- 66 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAG------------EERVRTWVGNGADVLVERALTWAGR---- 66 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHHhCccHHHHHHHHHhhccC----
Confidence 367999999999999999988899999999999876433 2344445555544332 23333221
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
....++. +.+...+.+.|..... ....++||+.++++.|+++|++++++||+....++..++.+ ++..+
T Consensus 67 -----~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~ 135 (226)
T PRK13222 67 -----EPDEELL----EKLRELFDRHYAENVA-GGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL-GIADY 135 (226)
T ss_pred -----CccHHHH----HHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CCccC
Confidence 1122222 2233334444444321 23689999999999999999999999999998888999886 76655
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ ++++...||+|++|..+++++++++++|++|||+.+|+++|+++|+.+
T Consensus 136 --f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 136 --FSVVIG------------------------GDSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred --ccEEEc------------------------CCCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcE
Confidence 677777 788888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhc--cccccccCCccccCHHHHHHHHH
Q 019226 303 VITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 303 v~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+++.++......+ ..+.+++.+ +.+|..++.
T Consensus 190 i~v~~g~~~~~~~~~~~~~~~i~~-----~~~l~~~l~ 222 (226)
T PRK13222 190 VGVTYGYNYGEPIALSEPDVVIDH-----FAELLPLLG 222 (226)
T ss_pred EEECcCCCCccchhhcCCCEEECC-----HHHHHHHHH
Confidence 9998876533222 234555544 455555543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=203.83 Aligned_cols=186 Identities=26% Similarity=0.460 Sum_probs=138.7
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 143 (344)
+++++|+||+||||+|+...+.++|.+++.++|++.+. ++ .+....|..... ...++..+|.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~---------~~---~~~~~~g~~~~~~~~~~~~~~~~~~--- 66 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSL---------EE---VFKRFKGVKLYEIIDIISKEHGVTL--- 66 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCH---------HH---HHHHhcCCCHHHHHHHHHHHhCCCC---
Confidence 35899999999999999999999999999999986432 11 122233433333 334445555431
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+++...+.+ .+.... .....++||+.++|+.| +++++|+||+....++..++.+ ++..+
T Consensus 67 ---------~~~~~~~~~~~----~~~~~~-~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~-~l~~~- 127 (221)
T PRK10563 67 ---------AKAELEPVYRA----EVARLF-DSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT-GMLHY- 127 (221)
T ss_pred ---------CHHHHHHHHHH----HHHHHH-HccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc-ChHHh-
Confidence 11222222222 222221 13478999999999999 3899999999988899989886 77766
Q ss_pred ccc-eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 224 GLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 224 ~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+ .+++ +++++..||+|++|..+++++|++|++|+||||+..|+++|+++|+.+
T Consensus 128 -F~~~v~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 128 -FPDKLFS------------------------GYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred -CcceEee------------------------HHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEE
Confidence 54 5666 778888999999999999999999999999999999999999999999
Q ss_pred EEEeCCC
Q 019226 303 VITYTSS 309 (344)
Q Consensus 303 v~v~~~~ 309 (344)
|++..+.
T Consensus 183 i~~~~~~ 189 (221)
T PRK10563 183 FYFCADP 189 (221)
T ss_pred EEECCCC
Confidence 9886543
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=207.40 Aligned_cols=210 Identities=18% Similarity=0.208 Sum_probs=152.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
..+++|+||+||||+|+...+..+++++++++|++... . +.+....+... ..+++..+.+
T Consensus 60 ~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~---------~---~~~~~~~g~~~---~~i~~~~~~~----- 119 (273)
T PRK13225 60 QTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPID---------E---RDYAQLRQWSS---RTIVRRAGLS----- 119 (273)
T ss_pred hhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCC---------H---HHHHHHhCccH---HHHHHHcCCC-----
Confidence 46999999999999999999999999999999986432 1 22333333322 2333333321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
++..+++. ..+.+.+.... ...+++||+.++|+.|+++|++++|+||+....+...++++ ++..+
T Consensus 120 ------~~~~~~~~----~~~~~~~~~~~--~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~-gl~~~-- 184 (273)
T PRK13225 120 ------PWQQARLL----QRVQRQLGDCL--PALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ-GLRSL-- 184 (273)
T ss_pred ------HHHHHHHH----HHHHHHHHhhc--ccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc-CChhh--
Confidence 12222222 22333333321 34689999999999999999999999999999999999997 77766
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++ +++++.|..+++++++++++|+||||+.+|+++|+++||.+|+
T Consensus 185 F~~vi~------------------------~~~~---~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 185 FSVVQA------------------------GTPI---LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred eEEEEe------------------------cCCC---CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 577666 5554 3457899999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHhh
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
+.++......+. .+++++++ +.+|.+++..++
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~-----~~eL~~~~~~~~ 271 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLET-----PSDLLQAVTQLM 271 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECC-----HHHHHHHHHHHh
Confidence 998877655442 35555554 455555555543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-26 Score=194.35 Aligned_cols=184 Identities=29% Similarity=0.504 Sum_probs=139.6
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccC
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 145 (344)
+|+|+||+||||+|+...+..++.++++++|.+.+ . .......|..... ....+..++..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~----------~---~~~~~~~g~~~~~~~~~~~~~~~~~------ 61 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD----------K---QYNTSLGGLSREDILRAILKLRKPG------ 61 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC----------H---HHHHHcCCCCHHHHHHHHHHhcCCC------
Confidence 58999999999999999999999999999987532 1 1122333443333 23344433211
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~ 225 (344)
...+. .+.+.+.+.+.|.+.+......++||+.++|+.|+++|++++++||+ ..++..++.+ ++..+ |
T Consensus 62 ---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~-~l~~~--f 129 (185)
T TIGR02009 62 ---LSLET----IHQLAERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL-GLTDY--F 129 (185)
T ss_pred ---CCHHH----HHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc-ChHHH--C
Confidence 11122 22333444445554443345789999999999999999999999998 5578888886 77777 6
Q ss_pred ceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 226 DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+.+++ +++++..||+|++|..+++++|+++++|++|||+..|+++|+++|+.+|+|
T Consensus 130 ~~v~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 130 DAIVD------------------------ADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CEeee------------------------hhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 88887 888888999999999999999999999999999999999999999999864
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-26 Score=194.67 Aligned_cols=184 Identities=27% Similarity=0.469 Sum_probs=141.0
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 142 (344)
+.++++|+||+||||+|+...+.++|.+++.++|.+.+. ..+....|...... ...+..++..
T Consensus 2 ~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~--- 65 (188)
T PRK10725 2 YDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE-------------QAMVALNGSPTWRIAQAIIELNQAD--- 65 (188)
T ss_pred CCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCC---
Confidence 456899999999999999999999999999999986332 23444455554433 3333333321
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
...++ +...+.+.+..... ....++|+ .++|..|++. ++++|+||+....++..++++ ++..+
T Consensus 66 ---------~~~~~----~~~~~~~~~~~~~~-~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~-~l~~~ 128 (188)
T PRK10725 66 ---------LDPHA----LAREKTEAVKSMLL-DSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL-GLRRY 128 (188)
T ss_pred ---------CCHHH----HHHHHHHHHHHHHh-ccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC-CcHhH
Confidence 11111 22222233333322 34578886 5899999876 899999999999999999997 77777
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ +++++..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+
T Consensus 129 --fd~i~~------------------------~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 129 --FDAVVA------------------------ADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred --ceEEEe------------------------hhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 688888 889989999999999999999999999999999999999999999999
Q ss_pred EEEe
Q 019226 303 VITY 306 (344)
Q Consensus 303 v~v~ 306 (344)
|++.
T Consensus 183 i~~~ 186 (188)
T PRK10725 183 VDVR 186 (188)
T ss_pred Eeec
Confidence 9874
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=197.73 Aligned_cols=106 Identities=23% Similarity=0.388 Sum_probs=98.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------s~~ 143 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA-GLDDP--FDAVLS------------------------ADA 143 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC-CChhh--hheeEe------------------------hhh
Confidence 579999999999999999999999999999999999987 77766 688888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.+||++++..
T Consensus 144 ~~~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~ 196 (198)
T TIGR01428 144 VRAYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPGE 196 (198)
T ss_pred cCCCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999987654
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-25 Score=230.84 Aligned_cols=219 Identities=29% Similarity=0.430 Sum_probs=167.0
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 141 (344)
..+++++|+|||||||+|+...+.++|.++++++|++... +.+...+|.+...+.. ....++++
T Consensus 71 ~~~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~-------------e~~~~~~G~~~~~~~~~~~~~~~l~-- 135 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTV-------------EDFVPFMGTGEANFLGGVASVKGVK-- 135 (1057)
T ss_pred cCCCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCCHHHHHHHHHHhcCCC--
Confidence 3568999999999999999999999999999999986432 2344555655544332 22233321
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME- 220 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~- 220 (344)
+.+.++..+.+.+.+.+.|... ....++||+.++|+.|+++|++++|+||.....++..++.+ ++.
T Consensus 136 ---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~-gl~~ 202 (1057)
T PLN02919 136 ---------GFDPDAAKKRFFEIYLEKYAKP---NSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA-GLPL 202 (1057)
T ss_pred ---------CCCHHHHHHHHHHHHHHHhhhc---ccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc-CCCh
Confidence 1111222222322232322211 22357999999999999999999999999999999999887 764
Q ss_pred hhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 221 RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 221 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+ |+.+++ ++++...||+|++|..+++++|++|++|+||||+..|+++|+++||
T Consensus 203 ~~--Fd~iv~------------------------~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 203 SM--FDAIVS------------------------ADAFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred hH--CCEEEE------------------------CcccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 44 688888 8999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCchhhhc--cccccccCCccccCHHHHHHH
Q 019226 301 ACVITYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~l 336 (344)
.+|++.++... +.+ ..+++++.++.++++.++...
T Consensus 257 ~~I~v~~~~~~-~~L~~~~a~~vi~~l~el~~~~~~~~ 293 (1057)
T PLN02919 257 RCIAVTTTLSE-EILKDAGPSLIRKDIGNISLSDILTG 293 (1057)
T ss_pred EEEEECCCCCH-HHHhhCCCCEEECChHHCCHHHHHhc
Confidence 99999987643 444 357789999999998777654
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=198.61 Aligned_cols=128 Identities=22% Similarity=0.384 Sum_probs=104.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+ +|++++|+||+....++..++++ ++..+ |+.+++ +++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~v~~------------------------~~~ 145 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT-GLRDY--FDLLVI------------------------SEQ 145 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC-ChHHH--cCEEEE------------------------ECc
Confidence 679999999999999 57999999999999899889886 77776 788888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
++..||+|++|..+++++|+. +++|+||||+. +|+++|+++||.+|++.++...... ...+++..-++.+|.+
T Consensus 146 ~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~-----~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 146 VGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPE-----GIAPTYQVSSLSELEQ 220 (224)
T ss_pred cCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCC-----CCCCeEEECCHHHHHH
Confidence 999999999999999999985 58999999998 6999999999999999754321111 1124444445666666
Q ss_pred HHH
Q 019226 336 LLQ 338 (344)
Q Consensus 336 ll~ 338 (344)
++.
T Consensus 221 ~l~ 223 (224)
T PRK09449 221 LLC 223 (224)
T ss_pred HHh
Confidence 553
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-25 Score=193.28 Aligned_cols=187 Identities=22% Similarity=0.387 Sum_probs=130.7
Q ss_pred cEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh------h----CCChhh-----HHHH
Q 019226 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ------I----GGGKPK-----MRWY 132 (344)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~-----~~~~ 132 (344)
|+|+||+||||+|+...+..++.++++++|++..... ....+...+... . |..... +...
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDE-----LEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHH-----HHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999999999998754310 000111111110 1 111111 1222
Q ss_pred HHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 133 FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 133 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
+...|.+ ..+. +...+.+.+..........++||+.++|+.|+++|++++|+||+... ....
T Consensus 76 ~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~ 137 (203)
T TIGR02252 76 FGRAGVP----------DPES-------FEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGL 137 (203)
T ss_pred HHhcCCC----------Cchh-------HHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHH
Confidence 2222211 0111 11112222222211234578999999999999999999999998875 4667
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
++.+ ++..+ |+.++. +++++..||+|++|..+++++|++|++|+||||+. +|
T Consensus 138 l~~~-~l~~~--fd~i~~------------------------s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~D 190 (203)
T TIGR02252 138 LEAL-GLLEY--FDFVVT------------------------SYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRND 190 (203)
T ss_pred HHHC-CcHHh--cceEEe------------------------ecccCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHH
Confidence 7775 77666 688888 88888999999999999999999999999999998 79
Q ss_pred HHHHHHcCCeEEE
Q 019226 292 LQAATRAGMACVI 304 (344)
Q Consensus 292 i~~a~~aG~~~v~ 304 (344)
+++|+++||.+||
T Consensus 191 i~~A~~aG~~~i~ 203 (203)
T TIGR02252 191 YQGARAAGWRALL 203 (203)
T ss_pred HHHHHHcCCeeeC
Confidence 9999999999885
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=197.84 Aligned_cols=185 Identities=18% Similarity=0.337 Sum_probs=135.9
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH-------hhCCChh---h-----HHH
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------QIGGGKP---K-----MRW 131 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---~-----~~~ 131 (344)
+|+|+||+||||+|+...+.+++.+++.++|++.+. .....+.. ....+.. . +..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTE----------DMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSA 70 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccH----------HHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 589999999999999999999999999998876432 11111111 0000000 0 011
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+...|.+. . .+.+.+.|..... ....++||+.++|+.|+++ ++++++||+....+..
T Consensus 71 ~~~~~~~~~------------~--------~~~~~~~~~~~~~-~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~ 128 (224)
T TIGR02254 71 LLKEYNTEA------------D--------EALLNQKYLRFLE-EGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYK 128 (224)
T ss_pred HHHHhCCCC------------c--------HHHHHHHHHHHHh-ccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHH
Confidence 111221100 0 0012222333221 2368999999999999999 9999999999999999
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEecCH-
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSV- 289 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGDs~- 289 (344)
.++.+ ++..+ |+.+++ +++++..||+|++|..+++++ |++|++|+||||+.
T Consensus 129 ~l~~~-~l~~~--fd~i~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~ 181 (224)
T TIGR02254 129 RLRKS-GLFPF--FDDIFV------------------------SEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLT 181 (224)
T ss_pred HHHHC-CcHhh--cCEEEE------------------------cCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcH
Confidence 99886 87777 688888 888889999999999999999 99999999999998
Q ss_pred hhHHHHHHcCCeEEEEeCCCc
Q 019226 290 IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 290 ~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+|+++|+++||.+|++.++..
T Consensus 182 ~di~~A~~~G~~~i~~~~~~~ 202 (224)
T TIGR02254 182 ADIKGGQNAGLDTCWMNPDMH 202 (224)
T ss_pred HHHHHHHHCCCcEEEECCCCC
Confidence 799999999999999987644
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=195.39 Aligned_cols=219 Identities=14% Similarity=0.194 Sum_probs=146.4
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCC------------hhhHHH
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG------------KPKMRW 131 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 131 (344)
+.++|+|+||+||||+|+...+..+++++++.++..... ...|.......+...++.. ...+..
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 82 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPA----LRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQ 82 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcc----hhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHH
Confidence 346899999999999999999989888877765321110 0013223233333322111 112333
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+..+|++ .+..+ ...+...+.+.... ....++||+.++|+.|+++ ++++++||++..
T Consensus 83 ~~~~~g~~-----------~~~~~----~~~~~~~~~~~~~~--~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~---- 140 (238)
T PRK10748 83 AMLDAGLS-----------AEEAS----AGADAAMINFAKWR--SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ---- 140 (238)
T ss_pred HHHHcCCC-----------HHHHH----HHHHHHHHHHHHHh--hcCCCCccHHHHHHHHHcC-CCEEEEECCCch----
Confidence 44455432 11111 11111112222211 2368999999999999976 999999998875
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-h
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-I 290 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~ 290 (344)
++.. ++..+ |+.+++ +++++..||+|++|..+++++|++|++|+||||+. .
T Consensus 141 -~~~~-gl~~~--fd~i~~------------------------~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~ 192 (238)
T PRK10748 141 -PELF-GLGDY--FEFVLR------------------------AGPHGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTT 192 (238)
T ss_pred -HHHC-CcHHh--hceeEe------------------------cccCCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHH
Confidence 3444 77776 688888 88888899999999999999999999999999995 8
Q ss_pred hHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 291 GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 291 Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
|+++|+++||.++|++.+...... ..+..+.|+....++.+|.++|
T Consensus 193 Di~~A~~aG~~~i~v~~~~~~~~~-~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 193 DVAGAIRCGMQACWINPENGDLMQ-TWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred HHHHHHHCCCeEEEEcCCCccccc-cccccCCCCEEECCHHHHHhhC
Confidence 999999999999999876543111 1234466777766777776653
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=193.56 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=108.4
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
....++||+.++|+.|+++|++++|+||+....++..++++ ++..+ |+.+++ +
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~-~l~~~--fd~iv~------------------------s 142 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT-GLDAH--LDLLLS------------------------T 142 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC-CcHHH--CCEEEE------------------------e
Confidence 34689999999999999999999999999999899888886 77776 688888 8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhhccccccccCCccccCHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 334 (344)
++++..||+|++|..+++++|++|++|+||||+..|+++|+++||.+ ++|.++....+. .+....+ +++++.
T Consensus 143 ~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~--~~~~~~~-----~~~~~~ 215 (224)
T PRK14988 143 HTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAE--KQYQRHP-----SLNDYR 215 (224)
T ss_pred eeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccc--hhccCCC-----cHHHHH
Confidence 88889999999999999999999999999999999999999999985 667665543222 2222333 356666
Q ss_pred HHHHHhh
Q 019226 335 LLLQNVV 341 (344)
Q Consensus 335 ~ll~~~~ 341 (344)
++++.++
T Consensus 216 ~~~~~l~ 222 (224)
T PRK14988 216 RLIPSLM 222 (224)
T ss_pred HHhhhhc
Confidence 6666554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=212.38 Aligned_cols=216 Identities=19% Similarity=0.295 Sum_probs=154.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCC-hHHHHHHHHhhCCChhhHHHHH-HHcCCCCc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQNQIGGGKPKMRWYF-KEHGWPSS 141 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~ 141 (344)
.+|+++|+||+||||+|+...+.++|++++.+++.... |. ....+.+....|.........+ ...+
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~---- 305 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQL--------WDTVTPIDKYREIMGVPLPKVWEALLPDHS---- 305 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcc--------cCCCCCHHHHHHHcCCChHHHHHHHhhhcc----
Confidence 35789999999999999999999999999998742100 00 0002345555665554432222 1111
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
....+.+...+.+.+.+.+......++||+.++|+.|+++|++++|+||+....++..++.+ ++..
T Consensus 306 -------------~~~~~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~-~l~~ 371 (459)
T PRK06698 306 -------------LEIREQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY-DLDQ 371 (459)
T ss_pred -------------hhHHHHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC-CcHh
Confidence 01122333344444444433345689999999999999999999999999999999999986 7777
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+ |+.+++ ++++. .||+|++|..++++++ +++|++|||+.+|+++|+++||.
T Consensus 372 ~--f~~i~~------------------------~d~v~-~~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 372 W--VTETFS------------------------IEQIN-SLNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLI 422 (459)
T ss_pred h--cceeEe------------------------cCCCC-CCCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCe
Confidence 6 688887 77764 4788899999999875 68999999999999999999999
Q ss_pred EEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+|++.++....+.+..+++++.+ +.+|.+++..
T Consensus 423 ~I~v~~~~~~~~~~~~~d~~i~~-----l~el~~~l~~ 455 (459)
T PRK06698 423 AIGCNFDFAQEDELAQADIVIDD-----LLELKGILST 455 (459)
T ss_pred EEEEeCCCCcccccCCCCEEeCC-----HHHHHHHHHH
Confidence 99998876554444445555544 4555555543
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=181.92 Aligned_cols=174 Identities=26% Similarity=0.487 Sum_probs=133.5
Q ss_pred EEEecCccccccchhHHHHHHHH-HHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccccCCC
Q 019226 70 LIFDCDGVIIESEHLHRQAYNDA-FSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTIFDNP 147 (344)
Q Consensus 70 viFD~DGTL~d~~~~~~~a~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 147 (344)
|+||+||||+++...+.+++... +++++.+.. .+.++...+..... +..++..++..
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 59 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEIS-------------AEELRELFGKSYEEALERLLERFGID-------- 59 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHH-------------HHHHHHHTTSHHHHHHHHHHHHHHHH--------
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCC-------------HHHHHHHhCCCHHHHHHHhhhccchh--------
Confidence 79999999999998888888874 667776421 23344444333332 22333332210
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccce
Q 019226 148 PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227 (344)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~ 227 (344)
.....+.+.+........++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.
T Consensus 60 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~-~~~~~--f~~ 122 (176)
T PF13419_consen 60 --------------PEEIQELFREYNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL-GLDDY--FDE 122 (176)
T ss_dssp --------------HHHHHHHHHHHHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT-THGGG--CSE
T ss_pred --------------HHHHHHHhhhhhhhhccchhhhhhhhhhhcccccceeEEeecCCccccccccccc-ccccc--ccc
Confidence 1112222222222245799999999999999999999999999999999999997 77765 688
Q ss_pred eecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 228 FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+++ +++.+..||++++|+.+++++|++|++|+||||+..|+++|+++||.+|+|
T Consensus 123 i~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 123 IIS------------------------SDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEE------------------------GGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ccc------------------------cchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 888 888999999999999999999999999999999999999999999999986
|
... |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=185.68 Aligned_cols=204 Identities=23% Similarity=0.365 Sum_probs=149.6
Q ss_pred cCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccccCCCCCCch
Q 019226 74 CDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDNPPVTDD 152 (344)
Q Consensus 74 ~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 152 (344)
|||||+|+...+..+|.+++.++|++.+. +.+....|...... ..+....+.+.. .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~G~~~~~~~~~~~~~~~~~~~----------~ 57 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDW-------------SLKAKMMGKKAIEAARIFVEESGLSDS----------L 57 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCH-------------HHHHHccCCCHHHHHHHHHHHhCCCCC----------C
Confidence 79999999999999999999999986321 23444556655543 334444454310 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeeccc
Q 019226 153 DQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC 232 (344)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~ 232 (344)
..+.+.+ .+...+.... ....++||+.++|+.|+++|++++|+||.........+....++..+ |+.+++
T Consensus 58 ~~~~~~~----~~~~~~~~~~--~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~-- 127 (220)
T PLN02811 58 SPEDFLV----EREAMLQDLF--PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVT-- 127 (220)
T ss_pred CHHHHHH----HHHHHHHHHH--hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEE--
Confidence 1111111 1222222221 23678999999999999999999999999876454433333344444 678887
Q ss_pred chhhhhccCCcCCccccccccCCC--CCCCCCCCHHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCeEEEEeC
Q 019226 233 QSYVLMTNGTLMPNRVCVCAHQGD--DVKQKKPDPSIYVTAAKRLG---ISEKDCLVVEDSVIGLQAATRAGMACVITYT 307 (344)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lg---v~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~ 307 (344)
++ +++.+||+|++|..+++++| +++++|+||||+..|+++|+++|+.+|++.+
T Consensus 128 ----------------------~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~ 185 (220)
T PLN02811 128 ----------------------GDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD 185 (220)
T ss_pred ----------------------CChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence 77 78889999999999999997 9999999999999999999999999999988
Q ss_pred CCchhhhccccccccCCccccCHHH
Q 019226 308 SSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 308 ~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
+......+..++.++.++.++...+
T Consensus 186 ~~~~~~~~~~~d~vi~~~~e~~~~~ 210 (220)
T PLN02811 186 PRLDKSYCKGADQVLSSLLDFKPEE 210 (220)
T ss_pred CCCcHhhhhchhhHhcCHhhCCHHH
Confidence 7655445567788999999888776
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=186.56 Aligned_cols=131 Identities=26% Similarity=0.384 Sum_probs=114.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++++|++.++|+.|+.+ ++++++||+....+...++.+ |+..+ ||.++. ++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~-gl~~~--Fd~v~~------------------------s~ 148 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL-GLLDY--FDAVFI------------------------SE 148 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc-CChhh--hheEEE------------------------ec
Confidence 378999999999999999 999999999998999999997 67777 799998 99
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
+++..||+|++|+.+++++|++|++|+||||+. +|+.+|+++||++||++.+.... .... ..++...-++.+|.+
T Consensus 149 ~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~---~~~~-~~~~~~i~~l~~l~~ 224 (229)
T COG1011 149 DVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPL---PDAL-EAPDYEISSLAELLD 224 (229)
T ss_pred ccccCCCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC---CCCc-cCCceEEcCHHHHHH
Confidence 999999999999999999999999999999999 58899999999999998876543 1122 566777777788877
Q ss_pred HHHH
Q 019226 336 LLQN 339 (344)
Q Consensus 336 ll~~ 339 (344)
++..
T Consensus 225 ~~~~ 228 (229)
T COG1011 225 LLER 228 (229)
T ss_pred HHhh
Confidence 7754
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-23 Score=183.96 Aligned_cols=112 Identities=21% Similarity=0.345 Sum_probs=93.0
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhh--HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...++||+.++|+.|+++|++++|+||+.... ....+... ++..+ |+.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~-~l~~~--fd~v~~------------------------ 144 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG-DIMAL--FDAVVE------------------------ 144 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh-hhHhh--CCEEEE------------------------
Confidence 46899999999999999999999999986543 22223222 44454 688887
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++++..||+|++|..+++++|++|++|+||||+..|+.+|+++||.+|++.++......|
T Consensus 145 s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~~~l 205 (211)
T TIGR02247 145 SCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDEEQAIHDL 205 (211)
T ss_pred eeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHHHHH
Confidence 8888889999999999999999999999999999999999999999999987765544443
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-22 Score=174.17 Aligned_cols=180 Identities=21% Similarity=0.206 Sum_probs=125.9
Q ss_pred cEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChh---------hHHHHHHHcCC
Q 019226 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP---------KMRWYFKEHGW 138 (344)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~ 138 (344)
++|+|||||||+|+...+..+++++++++|..... .+.+....|.+.. .+..++.....
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 68 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVT------------HADIDHTKLAGNANNDWQLTHRLVVDGLNSASS 68 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCC------------HHHHHHHHHccCccCchHHHHHHHHHhhhcccc
Confidence 47999999999999999999999999999743222 1234444443321 11122211100
Q ss_pred CCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHH--------HhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH
Q 019226 139 PSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII--------KSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210 (344)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~ 210 (344)
. ....+...+. +.+.+.+.|.... ......+.+++.++|+.|+++|++++|+||+....++
T Consensus 69 ------~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~ 137 (197)
T TIGR01548 69 ------E-RVRDAPTLEA----VTAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAA 137 (197)
T ss_pred ------h-hccCCccHHH----HHHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHH
Confidence 0 0001122222 2233333332210 0011245566799999999999999999999999999
Q ss_pred HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh
Q 019226 211 LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 290 (344)
Q Consensus 211 ~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~ 290 (344)
..++.+ ++..+ |+.+++ ++++.. ||+|++|..+++++|+++++|++|||+.+
T Consensus 138 ~~l~~~-gl~~~--f~~~~~------------------------~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~ 189 (197)
T TIGR01548 138 KFLTTH-GLEIL--FPVQIW------------------------MEDCPP-KPNPEPLILAAKALGVEACHAAMVGDTVD 189 (197)
T ss_pred HHHHHc-Cchhh--CCEEEe------------------------ecCCCC-CcCHHHHHHHHHHhCcCcccEEEEeCCHH
Confidence 999997 78777 688887 788776 99999999999999999999999999999
Q ss_pred hHHHHHHc
Q 019226 291 GLQAATRA 298 (344)
Q Consensus 291 Di~~a~~a 298 (344)
|+++|+++
T Consensus 190 Di~aA~~a 197 (197)
T TIGR01548 190 DIITGRKA 197 (197)
T ss_pred HHHHHHhC
Confidence 99999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=174.73 Aligned_cols=99 Identities=22% Similarity=0.408 Sum_probs=89.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|+ ++++|+||+....+...++.+ ++..+ |+.+++ ++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------~~ 131 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL-GIEDC--FDGIFC------------------------FD 131 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc-CcHhh--hCeEEE------------------------ee
Confidence 3579999999999998 579999999999999999997 77766 688888 77
Q ss_pred CCCC----CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 257 DVKQ----KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 257 ~~~~----~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+++. .||+|++|..+++++|++|++|+||||+..|+++|+++|+.+|+|
T Consensus 132 ~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 132 TANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred cccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 7765 599999999999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=170.10 Aligned_cols=212 Identities=27% Similarity=0.383 Sum_probs=155.2
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHH-HcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 141 (344)
....+.+++||+||||+|++..+.++|+.++.++|...+. +......|....+..+.+- ....+.
T Consensus 6 ~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~-------------~~~~~~mG~~~~eaa~~~~~~~~dp~- 71 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPW-------------DVKVKSMGKRTSEAARLFVKKLPDPV- 71 (222)
T ss_pred cccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChH-------------HHHHHHcCCCHHHHHHHHHhhcCCCC-
Confidence 3456889999999999999999999999999999984332 2344456666666555443 333332
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
..++...+. .+.....+ ....+.||+..+++.|+.+|++++++|+.++...+....++.++-.
T Consensus 72 -----------s~ee~~~e~----~~~~~~~~--~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~ 134 (222)
T KOG2914|consen 72 -----------SREEFNKEE----EEILDRLF--MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK 134 (222)
T ss_pred -----------CHHHHHHHH----HHHHHHhc--cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH
Confidence 222222222 22222222 3468999999999999999999999999999989988888744444
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCC
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+ |+..+.. .+.++..+||+|++|..+++.+|.++ ++|++|+|++..+++|++|||
T Consensus 135 ~--f~~~v~~----------------------d~~~v~~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm 190 (222)
T KOG2914|consen 135 N--FSHVVLG----------------------DDPEVKNGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGM 190 (222)
T ss_pred h--cCCCeec----------------------CCccccCCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCC
Confidence 3 3333320 16778889999999999999999998 999999999999999999999
Q ss_pred eEEEEeCCCchhhhccccccccCCccccC
Q 019226 301 ACVITYTSSTAEQDFKDAIAIYPDLSNVR 329 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 329 (344)
.+|++.+.......-..+..++.++.+.+
T Consensus 191 ~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 191 QVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred eEEEecCCCcchhhhhccceecccccccC
Confidence 99999885443333344556666655544
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-22 Score=168.48 Aligned_cols=100 Identities=37% Similarity=0.707 Sum_probs=90.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+.... .....++ ++..+ |+.+++ +++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~-~l~~~--f~~i~~------------------------~~~ 135 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL-GLRDL--FDVVIF------------------------SGD 135 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc-CCHHH--CCEEEE------------------------cCC
Confidence 5899999999999999999999999999887 5555554 77666 688888 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.+.+||+|++|..+++++|++|++|++|||+..|+++|+++|+.+|+|
T Consensus 136 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 136 VGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 889999999999999999999999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=170.52 Aligned_cols=112 Identities=22% Similarity=0.377 Sum_probs=96.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+........+....++..+ |+.+++ +++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~------------------------s~~ 136 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYL------------------------SQD 136 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEE------------------------ecc
Confidence 368999999999999999999999999887666555443355555 688888 899
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
++..||+|++|..+++++|++|++|+||||+..|+++|+++||.++++.++....+.|
T Consensus 137 ~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l 194 (199)
T PRK09456 137 LGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYF 194 (199)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHH
Confidence 9999999999999999999999999999999999999999999999998766554433
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-22 Score=171.14 Aligned_cols=189 Identities=13% Similarity=0.194 Sum_probs=120.8
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (344)
|+|+|+|||||||+|+. .++.++++++|++. +++...++....... ...++.
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~---------------~~~~~~~g~~~~~~~--~~~~~~------- 52 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT---------------DHILKMIQDERFRDP--GELFGC------- 52 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH---------------HHHHHHHhHhhhcCH--HHHhcc-------
Confidence 47999999999999943 45677788888742 233333333221111 111110
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc--
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-- 223 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-- 223 (344)
+.+... +.+..+....+. ....++||+.++|+.|++. ++++++||.........++.+ ++..+.
T Consensus 53 ----~~~~~~---~~~~~~~~~~~~-----~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~-~l~~~f~~ 118 (197)
T PHA02597 53 ----DQELAK---KLIEKYNNSDFI-----RYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF-NLNALFPG 118 (197)
T ss_pred ----cHHHHH---HHhhhhhHHHHH-----HhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC-CHHHhCCC
Confidence 011111 111111111111 2357999999999999997 568888997766555556565 555442
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCe
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMA 301 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a--G~~ 301 (344)
-|+.+++ +++ .||+|++|..+++++| +++|+||||+..|+++|++| ||+
T Consensus 119 ~f~~i~~------------------------~~~---~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 119 AFSEVLM------------------------CGH---DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred cccEEEE------------------------ecc---CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 1344554 444 3678999999999999 89999999999999999999 999
Q ss_pred EEEEeCCCchhhhccccccccCCccc
Q 019226 302 CVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+|+++++.. +..+.+.+.+.++.+
T Consensus 170 ~i~~~~~~~--~~~~~~~~~~~~~~~ 193 (197)
T PHA02597 170 VIHMLRGER--DHIPKLAHRVKSWND 193 (197)
T ss_pred EEEecchhh--ccccchhhhhccHHH
Confidence 999988854 222333455554443
|
2 hypothetical protein; Provisional |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=163.98 Aligned_cols=154 Identities=24% Similarity=0.448 Sum_probs=116.9
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccCCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPP 148 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 148 (344)
+|+||+||||+|+...+..+|+++++++|.. .+.+....|.....+.++...
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~g~~~~~~~~~~~~------------- 52 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGED---------------FQALKALRGLAEELLYRIATS------------- 52 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhccc---------------HHHHHHHHccChHHHHHHHHH-------------
Confidence 4899999999999999999999999988752 122333333222122111110
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee
Q 019226 149 VTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228 (344)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~ 228 (344)
.+.+.. |. .....+||+.++|+.|+++|++++++||+....+...++.+ +..+ |+.+
T Consensus 53 ---------~~~~~~-----~~-----~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~~--f~~i 109 (154)
T TIGR01549 53 ---------FEELLG-----YD-----AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGDY--FDLI 109 (154)
T ss_pred ---------HHHHhC-----cc-----hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHhc--CcEE
Confidence 011110 11 23467799999999999999999999999999999888875 3444 5777
Q ss_pred ecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
++ +++.+ .||+|++|..+++++|+++ +|+||||+..|+++|+++|
T Consensus 110 ~~------------------------~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 110 LG------------------------SDEFG-AKPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred Ee------------------------cCCCC-CCcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 77 77887 9999999999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=176.53 Aligned_cols=207 Identities=19% Similarity=0.288 Sum_probs=139.7
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc-
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST- 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 142 (344)
.+.+++|+||++|||+.......+.|..+.+.+|++++.+. +...+......+.+....+|.-...
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~-------------~~~~~~~~~~~~~~~~p~~~~~~g~l 70 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSL-------------IETIFRKDFKKMSEKGPFFGLYSGEL 70 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHH-------------HhHhhhHHHHhhcccCCcccccCCcc
Confidence 46799999999999999888888999999999999865421 1111111111111111111100000
Q ss_pred ---------ccCCC-CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 143 ---------IFDNP-PVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 143 ---------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
+.... ....+..+++.+.+. ...|.... ...+...+++.++++.||.+|+.++++||.+.. .+..
T Consensus 71 ~~~~ww~~lv~~~f~~~~~~~~~~~~~~~~---~~~~s~~~-~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~ 145 (237)
T KOG3085|consen 71 TLSQWWPKLVESTFGKAGIDYEEELLENFS---FRLFSTFA-PSAWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLL 145 (237)
T ss_pred cHHHHHHHHHHHHhccccchhHHHHHhhhh---hheecccc-ccCceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHH
Confidence 00000 000011111111111 11122111 135778899999999999999999999999987 4456
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
+..+ ++..+ ||.++. |++++..||+|++|+.+++++|+.|++|+||||+. ||
T Consensus 146 l~~~-~l~~~--fD~vv~------------------------S~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD 198 (237)
T KOG3085|consen 146 LLPL-GLSAY--FDFVVE------------------------SCEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLEND 198 (237)
T ss_pred hhcc-CHHHh--hhhhhh------------------------hhhhccCCCChHHHHHHHHHhCCChHHeEEecCccccc
Confidence 6664 77666 799998 99999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCeEEEEeCCCchhhhc
Q 019226 292 LQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++|+++||+++.|.+.......+
T Consensus 199 ~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 199 YEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred cHhHHHcCCEEEEEccccchhhhh
Confidence 999999999999988766544333
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.9e-20 Score=161.30 Aligned_cols=110 Identities=20% Similarity=0.239 Sum_probs=84.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+ ++..+. ..+|.+ +......
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-~i~~~--~~~~~~-------~~~~~~-------~~~~~~~ 146 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKL-GLDAA--FANRLE-------VEDGKL-------TGLVEGP 146 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCce--EeeEEE-------EECCEE-------EEEecCc
Confidence 579999999999999999999999999999999999886 66554 222211 001110 0000112
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...++|++.+|+.+++++++++++|+||||+.+|+++|+++|+..++
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~ 193 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF 193 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe
Confidence 23357899999999999999999999999999999999999998654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-20 Score=161.41 Aligned_cols=166 Identities=19% Similarity=0.309 Sum_probs=115.5
Q ss_pred EEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCCh-HHHHHHH-HhhCCChh-------hHHHHHHHcCCC
Q 019226 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDP-EFYDVLQ-NQIGGGKP-------KMRWYFKEHGWP 139 (344)
Q Consensus 69 ~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-------~~~~~~~~~g~~ 139 (344)
+|+||+||||+|+...+.+++.+++.+.+..... |.. .....+. ...+.... ....+...+|.+
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 73 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDL-------WRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLD 73 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHH-------HHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCC
Confidence 5899999999999999989988887765421000 111 1111111 12221111 233344444443
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.. .+ ..+.+.+.| ..+.++||+.++|+ +++|+||+....+...++++ ++
T Consensus 74 ~~---------~~--------~~~~~~~~~------~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~-~l 122 (175)
T TIGR01493 74 AE---------PK--------YGERLRDAY------KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA-GL 122 (175)
T ss_pred CC---------HH--------HHHHHHHHH------hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC-CC
Confidence 11 00 111111112 23579999999998 37899999999999999997 77
Q ss_pred chhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 220 ERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 220 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
..+ |+.+++ +++++..||+|++|..+++++|++|++|+||||+.+|+.+|+++
T Consensus 123 ~~~--fd~v~~------------------------~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 123 PWY--FDRAFS------------------------VDTVRAYKPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHH--Hhhhcc------------------------HhhcCCCCCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 777 687887 88888999999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.6e-20 Score=152.54 Aligned_cols=106 Identities=32% Similarity=0.495 Sum_probs=83.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||... ..+...++.+ ++... ..++.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~l~~~---~~~~~------------ 89 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQL-GVAVD---GVLFC------------ 89 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhC-CCcee---EEEEC------------
Confidence 47899999999999999999999999874 3344555554 43311 11221
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
... +++.+..||+|++|+.+++++|+++++|+||||+..|+++|+++||.+||++.+
T Consensus 90 ---------~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 90 ---------PHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred ---------CCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 000 344566799999999999999999999999999999999999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=156.53 Aligned_cols=122 Identities=20% Similarity=0.245 Sum_probs=95.3
Q ss_pred HHHHHH-HHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh--ccchhcccceeecccchh
Q 019226 159 DLIQDW-KTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLADCQSY 235 (344)
Q Consensus 159 ~~l~~~-~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~--~~~~~~~~d~~~~~~~~~ 235 (344)
+.|+.. +.+.|... .....++||+.++|++|+++|++++|+||+.....+..+++.. ++..+ ++.++.
T Consensus 76 k~lqg~iw~~~Y~~~--~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~fd----- 146 (220)
T TIGR01691 76 KTLQGLIWRQGYESG--ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYFD----- 146 (220)
T ss_pred HHHHHHHHHHHHhcC--CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEEE-----
Confidence 444444 44444432 2235799999999999999999999999999887777776641 33333 444443
Q ss_pred hhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 236 VLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
. ..+ .||+|++|..+++++|++|++|+||||+..|+++|+++||.++++.++..
T Consensus 147 -------------------~-~~g-~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 147 -------------------T-TVG-LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred -------------------e-Ccc-cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 1 122 69999999999999999999999999999999999999999999987764
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-19 Score=152.87 Aligned_cols=109 Identities=30% Similarity=0.440 Sum_probs=84.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||... ..+...++.+ ++ .++.++.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~----~f~~i~~------------ 90 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADR-GG----RLDGIYY------------ 90 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CC----ccceEEE------------
Confidence 57999999999999999999999999863 1122233332 22 1344332
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.+. +++.+..||+|++|..+++++|+++++|+||||+.+|+++|+++|+.++++.++...
T Consensus 91 --------~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~ 152 (181)
T PRK08942 91 --------CPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGV 152 (181)
T ss_pred --------CCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCc
Confidence 1111 345677999999999999999999999999999999999999999999999876543
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.1e-19 Score=156.10 Aligned_cols=213 Identities=15% Similarity=0.170 Sum_probs=126.1
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 142 (344)
.+++|+|+||+||||+++ +.+.++++++|.+.. ..+.++...++ ...+.+.+.. .+...
T Consensus 9 ~~~~k~viFDfDGTL~~~-----~~~~~~~~~~g~~~~------------~~~~~~~~~~g-~~~~~~~~~~~~~~~~-- 68 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVD-----EGIDELAEFCGAGEA------------VAEWTAKAMGG-SVPFEEALAARLSLFK-- 68 (224)
T ss_pred HccCCEEEEeCCCcccch-----HHHHHHHHHcCChHH------------HHHHHHHHHCC-CCCHHHHHHHHHHHcC--
Confidence 366899999999999996 445777888886411 11222222332 2233333322 21100
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
.. .+ ...+.+.. ....++||+.++|+.|+++|++++|+|++....++.+++.+ ++...
T Consensus 69 ---------~~----~~----~~~~~~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~-gi~~~ 126 (224)
T PLN02954 69 ---------PS----LS----QVEEFLEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAIL-GIPPE 126 (224)
T ss_pred ---------CC----HH----HHHHHHHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHh-CCChh
Confidence 00 01 11111221 23578999999999999999999999999999999999986 66531
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
..+...+.+ -.+|. +.+....+.....+|+++.+..+++++|. ++|++|||+.+|+++++++|+.+
T Consensus 127 ~~~~~~~~~------~~~g~------~~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~ 192 (224)
T PLN02954 127 NIFANQILF------GDSGE------YAGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADL 192 (224)
T ss_pred hEEEeEEEE------cCCCc------EECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCE
Confidence 112211110 00111 11000011122457788999999999885 69999999999999999989887
Q ss_pred EEEeCCCchhhhc-cccccccCCccccCHHHHHHHH
Q 019226 303 VITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 303 v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+...++....+.+ ..+++++.+ +.+|.+++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~-----~~el~~~~ 223 (224)
T PLN02954 193 FIGYGGVQVREAVAAKADWFVTD-----FQDLIEVL 223 (224)
T ss_pred EEecCCCccCHHHHhcCCEEECC-----HHHHHHhh
Confidence 6554433322222 234555544 44554443
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=151.97 Aligned_cols=107 Identities=21% Similarity=0.343 Sum_probs=83.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh--------HHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
+.++||+.++|+.|+++|++++|+||..... ....++.. + ++.++.
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~-g------~~~~~~------------------- 80 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF-G------FDDIYL------------------- 80 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC-C------cCEEEE-------------------
Confidence 5789999999999999999999999986421 12223332 2 222221
Q ss_pred cccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 250 VCAH-QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 250 ~~~~-~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.. .+++....||+|++|..++++++++|++|+||||+..|+++|+++|+.+|++.++...
T Consensus 81 -~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~ 142 (173)
T PRK06769 81 -CPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGY 142 (173)
T ss_pred -CcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCc
Confidence 000 1555677999999999999999999999999999999999999999999999887643
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.6e-19 Score=153.83 Aligned_cols=114 Identities=17% Similarity=0.075 Sum_probs=84.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+ +...+.. -.+|...|... .
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~-g~~~~--~~~~~~~------~~~g~~~p~~~--------~ 141 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL-NPDYV--YSNELVF------DEKGFIQPDGI--------V 141 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh-CCCeE--EEEEEEE------cCCCeEeccee--------e
Confidence 589999999999999999999999999999999999887 65554 2332220 01222211100 0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
....+++++.+..+++++|+++++|+||||+.+|+++|+.+|+.++....+
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 142 RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEG 192 (201)
T ss_pred EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCc
Confidence 011244557899999999999999999999999999999999988764433
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.9e-19 Score=152.81 Aligned_cols=125 Identities=22% Similarity=0.288 Sum_probs=90.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChh---------------hHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS---------------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~---------------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||.... .....++.+ ++. ++.++.
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~----~~~i~~------------ 87 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAER-DVD----LDGIYY------------ 87 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHc-CCC----ccEEEE------------
Confidence 579999999999999999999999998851 111222221 111 233322
Q ss_pred cCCccccccccC-------CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhh
Q 019226 243 LMPNRVCVCAHQ-------GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQD 314 (344)
Q Consensus 243 ~~~~~~~~~~~~-------~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~ 314 (344)
|.+. +++...+||+|++|..+++++|+++++|+||||+..|+++|+++|+.+ +++.++......
T Consensus 88 --------~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~ 159 (176)
T TIGR00213 88 --------CPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPE 159 (176)
T ss_pred --------CCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCccccc
Confidence 1111 235667899999999999999999999999999999999999999998 788887653332
Q ss_pred c-cccccccCCccc
Q 019226 315 F-KDAIAIYPDLSN 327 (344)
Q Consensus 315 l-~~~~~~~~~~~~ 327 (344)
. ..+++++.++.+
T Consensus 160 ~~~~ad~~i~~~~e 173 (176)
T TIGR00213 160 AENIADWVLNSLAD 173 (176)
T ss_pred ccccCCEEeccHHH
Confidence 2 235566655443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=160.01 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=99.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
.+++||+.++++.|++.|++++|+|++.....+...+.+ ++... +. +.+++.+|.+. ..+ ..+
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~L-gld~~------~a---n~lei~dg~lt---g~v----~g~ 242 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKL-RLDAA------VA---NELEIMDGKLT---GNV----LGD 242 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHc-CCCeE------EE---eEEEEECCEEE---eEe----cCc
Confidence 689999999999999999999999999998888888776 54432 11 12222333320 000 123
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
...+|||++.+..+++++|+++++|++|||+.||+.|++.||+..++ +. .+.....+++.+. ...+..+..+|
T Consensus 243 iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~---~~~l~~~l~~~ 315 (322)
T PRK11133 243 IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR---HADLMGVLCIL 315 (322)
T ss_pred cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec---CcCHHHHHHHh
Confidence 34579999999999999999999999999999999999999999876 22 2223345566664 23446666665
Q ss_pred HH
Q 019226 338 QN 339 (344)
Q Consensus 338 ~~ 339 (344)
..
T Consensus 316 ~~ 317 (322)
T PRK11133 316 SG 317 (322)
T ss_pred cc
Confidence 43
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-18 Score=140.35 Aligned_cols=98 Identities=33% Similarity=0.472 Sum_probs=82.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC--------hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT--------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~--------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
..++||+.++|+.|+++|++++++||+. ...+...++.+ ++.. +..+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~-~l~~----~~~~~------------------- 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEEL-GVPI----DVLYA------------------- 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHC-CCCE----EEEEE-------------------
Confidence 3689999999999999999999999998 66677777775 5432 22323
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEec-CHhhHHHHHHcCCeEEEEe
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRL-GISEKDCLVVED-SVIGLQAATRAGMACVITY 306 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGD-s~~Di~~a~~aG~~~v~v~ 306 (344)
.. ...||++++|..+++++ ++++++|+|||| +..|+++|+++|+.+|+++
T Consensus 80 -----~~--~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 80 -----CP--HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred -----CC--CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 22 46799999999999999 599999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-18 Score=147.31 Aligned_cols=108 Identities=14% Similarity=0.055 Sum_probs=93.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCC-ChhhHHHHHHHhhccc---------hhcccceeecccchhhhhccCCcCCc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIGME---------RFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~-~~~~~~~~l~~l~~~~---------~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
...++||+.++|+.|+++|++++|+||+ ....++..++.+ ++. .+ |+.+++
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~-~l~~~~~~~~~~~~--Fd~iv~---------------- 103 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF-EITYAGKTVPMHSL--FDDRIE---------------- 103 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC-CcCCCCCcccHHHh--ceeeee----------------
Confidence 4689999999999999999999999998 777778888886 665 55 678777
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHc--CCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRL--GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~l--gv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+++....||.+.+++.+.+.+ |++|++|+||||+..|+++|+++|+.++++.++...
T Consensus 104 --------~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 104 --------IYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred --------ccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCccH
Confidence 777666788888888888887 899999999999999999999999999999877553
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.5e-18 Score=143.48 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=90.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC---------------hhhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---------------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++|+||.. ...+...++.+ ++. |+.++.
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~ii~------------ 90 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQ-GII----FDDVLI------------ 90 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHC-CCc----eeEEEE------------
Confidence 5899999999999999999999999963 23345555554 443 343332
Q ss_pred cCCcccccc-ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhh
Q 019226 243 LMPNRVCVC-AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD 314 (344)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~ 314 (344)
| .|.+++....||++++|..+++++++++++|+||||+.+|+++|+++||.++++.++..+.+.
T Consensus 91 --------~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~~~~~~ 155 (161)
T TIGR01261 91 --------CPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEELNWDM 155 (161)
T ss_pred --------CCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhhcCHHH
Confidence 1 112467778999999999999999999999999999999999999999999999888766544
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.4e-18 Score=149.56 Aligned_cols=101 Identities=20% Similarity=0.177 Sum_probs=78.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-hhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++|+||+....++.+++++ ... .+...+..+. ++
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~------------------------~~ 127 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFS------------------------GE 127 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEec------------------------CC
Confidence 689999999999999999999999999999999988885 211 1111122223 45
Q ss_pred CCCCCCCCHHH----------HHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 257 DVKQKKPDPSI----------YVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 257 ~~~~~KP~~~~----------~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
.....||+|.. +..++++++..+++|+||||+.+|+.+|++||+.++
T Consensus 128 ~~~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 128 YITITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred eeEEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 55556776654 357889999999999999999999999999999443
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.6e-17 Score=140.70 Aligned_cols=189 Identities=19% Similarity=0.238 Sum_probs=134.0
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHH-----hcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCC
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFS-----HFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP 139 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 139 (344)
..+++++||+|.||++....+..+.++-+. ++|++.+. ...+ ...+++++|.+
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~------------a~~L----------~~~~yk~YG~t 70 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEE------------AEEL----------RESLYKEYGLT 70 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhh------------hHHH----------HHHHHHHHhHH
Confidence 479999999999999988777666663333 35655332 1111 23455666665
Q ss_pred CccccCCCCCCc-hhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc
Q 019226 140 SSTIFDNPPVTD-DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218 (344)
Q Consensus 140 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~ 218 (344)
...+...+...+ .+.. +...+....+.++|.+..+.+|-.|+.++ .++.||++..++.++++.+ |
T Consensus 71 ~aGL~~~~~~~d~deY~-----------~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L-G 136 (244)
T KOG3109|consen 71 MAGLKAVGYIFDADEYH-----------RFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL-G 136 (244)
T ss_pred HHHHHHhcccCCHHHHH-----------HHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh-C
Confidence 444333333221 1111 11111111233789999999999999875 8899999999999999998 8
Q ss_pred cchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHH
Q 019226 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 219 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~ 297 (344)
+.++ |+.++++ +.++| .+....+||.++.|+.+.+..|+. |++++||+||.++|+.|++
T Consensus 137 ieDc--Fegii~~---------e~~np---------~~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 137 IEDC--FEGIICF---------ETLNP---------IEKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred hHHh--ccceeEe---------eccCC---------CCCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh
Confidence 8887 6887772 11111 234456999999999999999998 9999999999999999999
Q ss_pred cCCeEEEEeCCC
Q 019226 298 AGMACVITYTSS 309 (344)
Q Consensus 298 aG~~~v~v~~~~ 309 (344)
.||.+|++....
T Consensus 197 vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 197 VGLKTVLVGREH 208 (244)
T ss_pred ccceeEEEEeee
Confidence 999999886544
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=152.96 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=88.9
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHH-HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVI-LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~-~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
-++++.++++.|+++|. ++|+||.+..... ..+.. .+...+ ++.+.. ...++..
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~--~~~i~~---------------------~~g~~~~ 198 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSL--VAAIET---------------------ASGRQPL 198 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHH--HHHHHH---------------------HhCCcee
Confidence 47899999999998887 7899998764321 11111 122222 222221 0013445
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc----------ccccccCCccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----------DAIAIYPDLSN 327 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~----------~~~~~~~~~~~ 327 (344)
..+||+|.+|..+++++|+++++|+||||+. .|+++|+++||.+++|.+|....+.+. .++++++++.+
T Consensus 199 ~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~ 278 (279)
T TIGR01452 199 VVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLAD 278 (279)
T ss_pred ccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEeccccc
Confidence 5689999999999999999999999999996 899999999999999999988766553 35666666554
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=141.93 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=82.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCC----ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAA----TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~----~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
...+.+++.++|+.|+++|++++++||. ....++.+++.+ ++..+ ++.++.
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l-Gi~~~--f~~i~~---------------------- 166 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF-HIPAM--NPVIFA---------------------- 166 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh-CCchh--eeEEEC----------------------
Confidence 3467788999999999999999999998 555677777776 77665 566766
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+++....||++. .+++++++ ++||||+.+|+.+|+++|+.++.+.++...
T Consensus 167 --~d~~~~~Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 167 --GDKPGQYQYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred --CCCCCCCCCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 777766788875 35567776 799999999999999999999999877664
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-16 Score=135.94 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=74.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++ ++++|+||+....++..++++ ++..+ +...+.+ .++|.+ . +.+
T Consensus 67 ~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~-gl~~~--f~~~~~~------~~~~~i------~----~~~ 126 (205)
T PRK13582 67 LDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL-GWPTL--FCHSLEV------DEDGMI------T----GYD 126 (205)
T ss_pred CCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc-CCchh--hcceEEE------CCCCeE------E----Ccc
Confidence 67899999999999999 999999999999999999987 76655 2222220 001100 0 222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.|.....++++++..+++|+||||+.+|+++++++|+.+.
T Consensus 127 ----~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~ 168 (205)
T PRK13582 127 ----LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL 168 (205)
T ss_pred ----ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE
Confidence 233344456666777778999999999999999999999754
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-17 Score=136.87 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=80.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChh------------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS------------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~------------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.++||+.++|+.|+++|++++|+||.... .+...++++ ++. ++.++.
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~-gl~----~~~ii~---------------- 100 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKL-KVP----IQVLAA---------------- 100 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHc-CCC----EEEEEe----------------
Confidence 37899999999999999999999997753 345666665 442 134444
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEecCH--------hhHHHHHHcCCeEEE
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDSV--------IGLQAATRAGMACVI 304 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~--------~Di~~a~~aG~~~v~ 304 (344)
+++....||+|++|..+++++| +++++|+||||+. .|+++|+++|+.+++
T Consensus 101 --------~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 101 --------THAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred --------cCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 4455568999999999999999 9999999999996 699999999999875
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=144.76 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=82.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
.++++.+.++.|++.+++++++||.+........... +...+ ++.+.. +.......
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~-g~g~~--~~~i~~---------------------~~~~~~~~ 176 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL-DVGPF--VTALEY---------------------ATDTKATV 176 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC-CchHH--HHHHHH---------------------HhCCCcee
Confidence 3678888999999999999999998876554444332 44443 233322 00022233
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCch
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.+||+|.+|+.+++++|+++++|+||||+. +|+.+|+++||.+++|.++...
T Consensus 177 ~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~ 229 (257)
T TIGR01458 177 VGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYR 229 (257)
T ss_pred ecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCC
Confidence 479999999999999999999999999996 8999999999999999888643
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.68 E-value=3e-16 Score=141.43 Aligned_cols=99 Identities=21% Similarity=0.326 Sum_probs=73.3
Q ss_pred eecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCe
Q 019226 228 FLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMA 301 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~ 301 (344)
++..++|..-.+++.+.|....+. ....+.+..+||+|.+|+.+++++++++++|+||||+. .|+.+|+++||.
T Consensus 139 ~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~ 218 (249)
T TIGR01457 139 FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGID 218 (249)
T ss_pred EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCc
Confidence 344455555555555555444332 33345666789999999999999999999999999997 799999999999
Q ss_pred EEEEeCCCchhhhcc----ccccccCCcc
Q 019226 302 CVITYTSSTAEQDFK----DAIAIYPDLS 326 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~----~~~~~~~~~~ 326 (344)
+++|.++....+++. .++++++++.
T Consensus 219 ~v~v~~G~~~~~~~~~~~~~pd~~v~~l~ 247 (249)
T TIGR01457 219 TLLVHTGVTKAEEVAGLPIAPTHVVSSLA 247 (249)
T ss_pred EEEEcCCCCCHHHHhcCCCCCCEEeCChh
Confidence 999999887655542 2455555544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.2e-16 Score=140.09 Aligned_cols=226 Identities=16% Similarity=0.190 Sum_probs=127.0
Q ss_pred ccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
+|+++||+||||++....+..+ +.+.+.+.|.+....+ +........+.+.+...|++..
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~T---------------n~~~~~~~~~~~~l~~~G~~~~--- 62 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLT---------------NYPSQTGQDLANRFATAGVDVP--- 62 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEe---------------CCCCCCHHHHHHHHHHcCCCCC---
Confidence 5799999999999987544322 2333445666644322 1222223334455555665421
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeE-------EEEeCCChhhHHHHHHHhh
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKV-------AVCSAATKSSVILCLENLI 217 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v-------~ivTn~~~~~~~~~l~~l~ 217 (344)
+++.-.-.....++..+ . .......-|...+.+.|++.|+.+ +++. .+.......+....
T Consensus 63 ------~~~i~ts~~~~~~~L~~----~--~~~~v~~~g~~~l~~~l~~~g~~~~~~~~~~Vvvg-~~~~~~~~~l~~a~ 129 (248)
T PRK10444 63 ------DSVFYTSAMATADFLRR----Q--EGKKAYVIGEGALIHELYKAGFTITDINPDFVIVG-ETRSYNWDMMHKAA 129 (248)
T ss_pred ------HhhEecHHHHHHHHHHh----C--CCCEEEEEcCHHHHHHHHHCcCEecCCCCCEEEEe-CCCCCCHHHHHHHH
Confidence 11100001111111111 0 011123356677888888877763 2333 23322222222221
Q ss_pred ccchhcccceeecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 218 GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 218 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
..-. . --.+++.++|. .. +.+.|.-..++ ....+....+||+|++|+.+++++++++++|+||||+. .|
T Consensus 130 ~~l~-~-g~~~i~~n~D~--~~-~g~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tD 204 (248)
T PRK10444 130 YFVA-N-GARFIATNPDT--HG-RGFYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTD 204 (248)
T ss_pred HHHH-C-CCEEEEECCCC--CC-CCCcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHH
Confidence 1001 1 12344434333 22 23555554433 22234455689999999999999999999999999997 79
Q ss_pred HHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCcccc
Q 019226 292 LQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV 328 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~ 328 (344)
+.+|+++|+.+++|.++....+.+. .++++++++.++
T Consensus 205 i~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 205 ILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred HHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 9999999999999999988776664 355666665544
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-15 Score=130.65 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=76.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhcc-CCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTN-GTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 256 (344)
++++||+.++++.|++.+ +++|+|++....++.+++.+ +++.+...+.. +++ |.+ ++.
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l-gi~~~~an~l~---------~~~~g~~----------tG~ 125 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL-GFPTLLCHKLE---------IDDSDRV----------VGY 125 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc-CCchhhceeeE---------EecCCee----------ECe
Confidence 589999999999999985 99999999999999999987 76655222222 222 222 022
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
.. ..+|.+..+...+++.+. +|++|||+.||+.|++.+|...++..
T Consensus 126 ~~-~~~~~K~~~l~~l~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~a 171 (203)
T TIGR02137 126 QL-RQKDPKRQSVIAFKSLYY---RVIAAGDSYNDTTMLSEAHAGILFHA 171 (203)
T ss_pred ee-cCcchHHHHHHHHHhhCC---CEEEEeCCHHHHHHHHhCCCCEEecC
Confidence 22 345555555555566663 89999999999999999999987644
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.67 E-value=8.4e-16 Score=130.55 Aligned_cols=101 Identities=21% Similarity=0.316 Sum_probs=82.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC-hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~-~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++++||+. ...+...++.+ ++. .. .
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~-gl~--------~~------------------------~- 87 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL-GIP--------VL------------------------P- 87 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc-CCE--------EE------------------------c-
Confidence 3678999999999999999999999998 45444444432 211 11 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhh
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQD 314 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~ 314 (344)
...||+|++|..+++++|+++++|+||||+. .|+++|+++||.+|++.++....+.
T Consensus 88 --~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~ 144 (170)
T TIGR01668 88 --HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQW 144 (170)
T ss_pred --CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCccc
Confidence 2369999999999999999999999999998 6999999999999999988765543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.6e-16 Score=124.87 Aligned_cols=117 Identities=27% Similarity=0.426 Sum_probs=87.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..+++++.++|+.|+++|++++++||+....++..++.+ ++..+ ++.++..........++.. ......
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~-~~~~~--~~~i~~~~~~~~~~~~~~~--------~~~~~~ 91 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL-GLDDY--FDPVITSNGAAIYYPKEGL--------FLGGGP 91 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc-CCchh--hhheeccchhhhhcccccc--------cccccc
Confidence 689999999999999999999999999999999999886 55433 3545441000000000000 001223
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
+..+||++..+..+.++++..++++++|||+.+|+++++++|+.++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 334599999999999999999999999999999999999999999874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.7e-15 Score=131.45 Aligned_cols=99 Identities=19% Similarity=0.221 Sum_probs=76.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.|+++|++++|+|++....++.+++.+.....+...+..+. ++.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~------------------------~~~ 124 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFS------------------------NEY 124 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEee------------------------CCe
Confidence 68999999999999999999999999999989988887622222111122222 344
Q ss_pred CCCCCCCHHHH----------HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 258 VKQKKPDPSIY----------VTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 258 ~~~~KP~~~~~----------~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
....||++..+ ..++++++..+++|+||||+.+|+.+|+.||+
T Consensus 125 ~~~~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 125 IHIDWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred eEEeCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 44566766654 46777777788999999999999999999998
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.1e-15 Score=129.30 Aligned_cols=110 Identities=23% Similarity=0.261 Sum_probs=86.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.++++|++++|+|++....++.+.+.+ +++..... .+.+.||.+- ......
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~l-g~d~~~an---------~l~~~dG~lt-------G~v~g~ 138 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERL-GIDYVVAN---------ELEIDDGKLT-------GRVVGP 138 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHh-CCchheee---------EEEEeCCEEe-------ceeeee
Confidence 689999999999999999999999999999999999997 76665322 2223343220 000222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...++-+......+++++|+++++++++||+.||+.|...+|...++
T Consensus 139 ~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 139 ICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred ecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 33345578889999999999999999999999999999999999764
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.3e-15 Score=135.20 Aligned_cols=244 Identities=20% Similarity=0.229 Sum_probs=149.4
Q ss_pred CCCCccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCC
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWP 139 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 139 (344)
.+..+++++||+||||++....+..+ +.+.+.+.|++... +.+........+...+.. .+.+
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~if---------------lTNn~~~s~~~~~~~L~~~~~~~ 68 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIF---------------LTNNSTRSREVVAARLSSLGGVD 68 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEE---------------EeCCCCCCHHHHHHHHHhhcCCC
Confidence 35679999999999999988766443 44455567776543 333344444445555555 2321
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeC----------CChhhH
Q 019226 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSA----------ATKSSV 209 (344)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn----------~~~~~~ 209 (344)
.. .++.-.-.....++..+.+. ..-...=|...+.+.|+..|+.+.-..+ .++...
T Consensus 69 ~~---------~~~i~TS~~at~~~l~~~~~-----~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~ 134 (269)
T COG0647 69 VT---------PDDIVTSGDATADYLAKQKP-----GKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLT 134 (269)
T ss_pred CC---------HHHeecHHHHHHHHHHhhCC-----CCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCC
Confidence 10 11111101111222221111 0112334666777888888765433222 222222
Q ss_pred HHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccc-----ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 019226 210 ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC-----AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLV 284 (344)
Q Consensus 210 ~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~ 284 (344)
.+.+......-. .+ -.+++.++|..-.+++.+.|...-++ +........+||++.+|+.+++.++.++++|+|
T Consensus 135 ~e~l~~a~~~i~-~g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~m 212 (269)
T COG0647 135 YEKLAEALLAIA-AG-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLM 212 (269)
T ss_pred HHHHHHHHHHHH-cC-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEE
Confidence 233332212111 11 45677788988888888988877665 222233467999999999999999999999999
Q ss_pred EecCHh-hHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 285 VEDSVI-GLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 285 vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
|||+.. ||.+|.++||.+++|.+|....+++... ...|++..-++.++...+.
T Consensus 213 VGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~-~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 213 VGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRA-EVKPTYVVDSLAELITALK 266 (269)
T ss_pred EcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhh-ccCCcchHhhHHHHHhhhh
Confidence 999995 9999999999999999999977665432 3455555555555555443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.7e-14 Score=125.87 Aligned_cols=112 Identities=18% Similarity=0.134 Sum_probs=84.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.++++|++++|+|++....++.+++.+ +++.+...+..+. .||.+. ....+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~l-g~~~~~~~~l~~~--------~~g~~~-------g~~~~~ 149 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARIL-GIDNAIGTRLEES--------EDGIYT-------GNIDGN 149 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCcceEecceEEc--------CCCEEe-------CCccCC
Confidence 478999999999999999999999999999999998886 6655422211211 122110 000112
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
...++++...++.++++.++++++|+++||+.+|+++++.+|..++..
T Consensus 150 ~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 150 NCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 334677888899999999999999999999999999999999987653
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=122.68 Aligned_cols=111 Identities=14% Similarity=0.105 Sum_probs=79.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccC--
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQ-- 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 254 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +-.... +|.+ .+-++.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~---~~~~~~~~g~~-----~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI-GEKDV--FIEIYS---NPASFDNDGRH-----IVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc-CChhh--eeEEec---cCceECCCCcE-----EEecCCCC
Confidence 589999999999999999999999999999999999886 66665 566665 111111 1111 000100
Q ss_pred -CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 255 -GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 255 -~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
......+.+|+++++.+.++. +++|+||||+.+|+.+|+++++-+
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 012223455688888887765 799999999999999999986643
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.1e-15 Score=136.77 Aligned_cols=109 Identities=19% Similarity=0.314 Sum_probs=84.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC---------------hhhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT---------------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---------------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
..++||+.++|+.|+++|++++|+||.+ ...+...++.+ ++. ++.++.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~-gl~----fd~i~i------------ 91 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQ-GIK----FDEVLI------------ 91 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHc-CCc----eeeEEE------------
Confidence 5899999999999999999999999952 22233334443 321 233322
Q ss_pred cCCcccccccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 243 LMPNRVCVCAH-QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|++ .+++...+||+|.++..+++++++++++++||||+.+|+++|+++||.+|+++.....
T Consensus 92 --------~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~ 153 (354)
T PRK05446 92 --------CPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARETLN 153 (354)
T ss_pred --------eCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCC
Confidence 111 1356677899999999999999999999999999999999999999999999665443
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.7e-14 Score=120.89 Aligned_cols=106 Identities=24% Similarity=0.215 Sum_probs=78.4
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 255 (344)
.+.++||+.++++.++++|++++|+|++....++..++.+ ++..+. ...+. + +||.+. +.+.+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~-g~~~~~--~~~~~-------~~~~g~~~------g~~~~ 134 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKL-GIDDVF--ANRLE-------FDDNGLLT------GPIEG 134 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCchhe--eeeEE-------ECCCCEEe------CccCC
Confidence 3578999999999999999999999999999999999887 665542 22222 1 122210 00011
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
.....+..|...+..+++++|+++++|++|||+.+|+.|++.+
T Consensus 135 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 135 QVNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 1223355667889999999999999999999999999998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-14 Score=131.74 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=62.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccc-cccccCCccccCHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKD-AIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~l 336 (344)
..+||+|.+|..+++++++++++|+||||+. +|+.+|+++||.+++|.++....+++.. .....|++..-++.+|.++
T Consensus 227 ~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 227 VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 3479999999999999999999999999997 8999999999999999988876655432 1123355554555666655
Q ss_pred HH
Q 019226 337 LQ 338 (344)
Q Consensus 337 l~ 338 (344)
++
T Consensus 307 ~~ 308 (311)
T PLN02645 307 KA 308 (311)
T ss_pred hh
Confidence 54
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.7e-14 Score=133.64 Aligned_cols=104 Identities=21% Similarity=0.201 Sum_probs=91.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch-hcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++++||......+..++++ ++.. + |+.+++ .+
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l-~~~~~~--f~~i~~------------------------~~ 238 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL-RQTDIW--FDDLIG------------------------RP 238 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH-HHcCCc--hhhhhC------------------------Cc
Confidence 478999999999999999999999999999999999997 5554 3 566655 44
Q ss_pred -------CCCCCCCCHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 257 -------DVKQKKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 257 -------~~~~~KP~~~~~~~~~~~lgv-~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
+....||+|+++..++++++. ++++|+||||+.+|+.+|+++|+.+++|.+|
T Consensus 239 ~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 239 PDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred chhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 344689999999999999998 5799999999999999999999999999766
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-14 Score=116.95 Aligned_cols=88 Identities=17% Similarity=0.154 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCC-ChhhHHHHHHHhhc-------cchhcccceeecccchhhhhccCCcCCccccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAA-TKSSVILCLENLIG-------MERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~-~~~~~~~~l~~l~~-------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
.++||+.++|+.|+++|++++++||+ ....+...++.. + +..+ |+.+++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~-~~~~~i~~l~~~--f~~~~~-------------------- 85 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIF-EDFGIIFPLAEY--FDPLTI-------------------- 85 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhc-cccccchhhHhh--hhhhhh--------------------
Confidence 58899999999999999999999999 777777777775 4 3444 455554
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHH
Q 019226 251 CAHQGDDVKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~ 297 (344)
++ .+|+|++|..+++++| +.|++|+||||+..|+...+.
T Consensus 86 ----~~----~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 86 ----GY----WLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ----cC----CCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 43 3589999999999999 999999999999999877654
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.5e-14 Score=116.76 Aligned_cols=93 Identities=27% Similarity=0.413 Sum_probs=80.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
..-|.+.+.+.+++++|+++.|+||+...-+....+.+ + ++.+.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l-~------v~fi~----------------------------- 89 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL-G------VPFIY----------------------------- 89 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc-C------Cceee-----------------------------
Confidence 45567888999999999999999999998888877775 3 23333
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT 307 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~ 307 (344)
...||-+..|+++++++++++++|+||||.. .|+.+++++||.||.|..
T Consensus 90 ~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 90 RAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 2389999999999999999999999999999 699999999999999864
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.4e-14 Score=119.57 Aligned_cols=115 Identities=12% Similarity=0.139 Sum_probs=86.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
++++|+++|++++|+||.....+...++.+ ++.. ++. + .||+++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~-gi~~------~~~------------------------~-----~~~k~~ 79 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL-GITH------LYQ------------------------G-----QSNKLI 79 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc-CCCE------EEe------------------------c-----ccchHH
Confidence 799999999999999999998888888876 4433 233 2 378899
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhh
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
++..+++++|+++++|+||||+.+|+++++.+|+. +.+.+... ...+.+.+++++-..- .-|.+++++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~~~~~--g~~~~~~~~~~~ 150 (154)
T TIGR01670 80 AFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHP--LLIPRADYVTRIAGGR--GAVREVCELLLL 150 (154)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCH--HHHHhCCEEecCCCCC--cHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 55544433 2233455566443322 226666666554
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.7e-14 Score=123.84 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=77.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCC----hhhHHHHHHHhhcc--chhcccceeecccchhhhhccCCcCCccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT----KSSVILCLENLIGM--ERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~----~~~~~~~l~~l~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
...++||+.++|+.|+++|++++++||.. ...++.+++.+ ++ ..+ ++.++.
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~-gip~~~~--f~vil~-------------------- 168 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF-HIPADNM--NPVIFA-------------------- 168 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc-CCCcccc--eeEEEc--------------------
Confidence 36899999999999999999999999964 33455555554 66 444 455555
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 251 CAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
++.. .||++.. +++++++ ++||||+.+|+++|++||+.++.+.++....
T Consensus 169 ----gd~~--~K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~~ 217 (237)
T PRK11009 169 ----GDKP--GQYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAANST 217 (237)
T ss_pred ----CCCC--CCCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCCCC
Confidence 5543 6777754 5556765 8999999999999999999999998887643
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.7e-14 Score=122.74 Aligned_cols=89 Identities=29% Similarity=0.436 Sum_probs=76.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.++|+.|+++|++++++|+.+...+..+.+.+ ++. +..+. +...
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l-gi~-----~~~v~------------------------a~~~ 176 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL-GIF-----DSIVF------------------------ARVI 176 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT-TSC-----SEEEE------------------------ESHE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccc-ccc-----ccccc------------------------cccc
Confidence 57899999999999999999999999999899888886 652 32222 2222
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
+||++.+|..+++++++++++|+||||+.||+.|+++||
T Consensus 177 --~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 --GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 699999999999999999999999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-13 Score=126.45 Aligned_cols=228 Identities=9% Similarity=0.131 Sum_probs=122.9
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHH---hcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCC---
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP--- 139 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--- 139 (344)
++|+|+||+||||++....+.+...+++. +.|+.....++|.+.. +..+++..+..
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~------------------~~~~~~~l~~~~~~ 63 (272)
T PRK10530 2 TYRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTGRHHVA------------------IHPFYQALALDTPA 63 (272)
T ss_pred CccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcCCChHH------------------HHHHHHhcCCCCCE
Confidence 58999999999999887655444455554 4577766655544333 33333332221
Q ss_pred ------------CccccCCCCCCchhHHHHHHHHHHHHH----------------HHHHHH--H-H---hCCCccCccHH
Q 019226 140 ------------SSTIFDNPPVTDDDQAKLIDLIQDWKT----------------ERYQQI--I-K---SGTVEPRPGVL 185 (344)
Q Consensus 140 ------------~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~--~-~---~~~~~~~pgv~ 185 (344)
..+++....++.+...++.+.+.+... ..+... + . ......++++.
T Consensus 64 I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (272)
T PRK10530 64 ICCNGTYLYDYQAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVD 143 (272)
T ss_pred EEcCCcEEEecCCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcc
Confidence 112333334444444444444322100 000000 0 0 00112356777
Q ss_pred HHHHHHHHcCCeEEEEeCCCh-hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCC
Q 019226 186 RLMDEAKAAGKKVAVCSAATK-SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPD 264 (344)
Q Consensus 186 ~~l~~Lk~~g~~v~ivTn~~~-~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~ 264 (344)
++++.++..+..+.++++... ...+...+.+. ..+ ++....+. .++ -+-+..+..+
T Consensus 144 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~-~~~~~~s~-~~~-------------------~ei~~~~~~K 200 (272)
T PRK10530 144 SLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE--HEL-GLECEWSW-HDQ-------------------VDIARKGNSK 200 (272)
T ss_pred cHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh--hhc-CceEEEec-Cce-------------------EEEecCCCCh
Confidence 778877777766667776442 11222222221 111 11111110 000 1122334457
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+..++.+++++|+++++|++|||+.||++|++.+|+..++ ++...+....+++++++-.+- -+.++++++
T Consensus 201 ~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n~~d---Gv~~~l~~~ 270 (272)
T PRK10530 201 GKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDNTTP---SIAEFIYSH 270 (272)
T ss_pred HHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecCCCC---cHHHHHHHH
Confidence 8899999999999999999999999999999999987655 223333334577777665443 344444443
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.5e-13 Score=116.03 Aligned_cols=112 Identities=19% Similarity=0.256 Sum_probs=84.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.+..|+++|++++|+||.....++..++.+ ++..+ +. . .||+|+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l-gi~~~------f~------------------------~-----~kpkp~ 85 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEEL-KIKRF------HE------------------------G-----IKKKTE 85 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHC-CCcEE------Ee------------------------c-----CCCCHH
Confidence 567788899999999999999999999997 65443 22 1 279999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc-CHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV-RLKDLELLL 337 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~ll 337 (344)
.|..+++++++++++|++|||+.+|+.|++.+|+..++-+.. ......+.++..+-.+- -+.++.+.+
T Consensus 86 ~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~---~~lk~~A~~I~~~~~~~g~v~e~~e~i 154 (169)
T TIGR02726 86 PYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAV---ADVKEAAAYVTTARGGHGAVREVAELI 154 (169)
T ss_pred HHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCch---HHHHHhCCEEcCCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999998764322 23334456665433322 234554444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.5e-13 Score=116.12 Aligned_cols=192 Identities=10% Similarity=-0.040 Sum_probs=108.8
Q ss_pred CccEEEEecCccccccchhHHHHHHHHH-HhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAF-SHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
..|+++||+||||++. .....+...+ .++|+.... ...+...+|.+......... .+ ...++
T Consensus 5 ~~k~~iFD~DGTL~~~--d~~~~~~~~~~~~~g~~~~~------------~~~~~~~ig~~l~~~~~~~~-~~--~~~~~ 67 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ--DMFGSFLRYLLRRQPLNLLL------------VLPLLPVIGLGLLVKGRAAR-WP--MSLLL 67 (211)
T ss_pred cceEEEEecCCCCccc--chHHHHHHHHHHhcchhhHH------------HhHHHHHhccCcccchhhhh-hh--HHHHH
Confidence 4579999999999943 3556666666 777765322 23344445544433111100 00 00000
Q ss_pred C--CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHH-HHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 145 D--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM-DEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 145 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l-~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
. ..+.+.++ .+.+.+.+.+.|... ..++||+.++| +.+++.|++++|+||.....++.+++.+ ++..
T Consensus 68 ~~~~~g~~~~~----~~~~~~~f~~~~~~~-----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l-~~~~ 137 (211)
T PRK11590 68 WGCTFGHSEAR----LQALEADFVRWFRDN-----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDT-PWLP 137 (211)
T ss_pred HHHHcCCCHHH----HHHHHHHHHHHHHHh-----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-cccc
Confidence 0 00111121 233333344444332 46799999999 5788899999999999999999999886 4211
Q ss_pred hcccceeecccchhhhhc-cCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 222 FEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+.+++. -+++. +|.+ ......+.-|. ..+.+.++.+.+.+.+.|||.+|+.+...+|-
T Consensus 138 ---~~~~i~t---~l~~~~tg~~-----------~g~~c~g~~K~---~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 138 ---RVNLIAS---QMQRRYGGWV-----------LTLRCLGHEKV---AQLERKIGTPLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ---cCceEEE---EEEEEEccEE-----------CCccCCChHHH---HHHHHHhCCCcceEEEecCCcccHHHHHhCCC
Confidence 1333331 01111 2222 11111122122 33334457677888999999999999999999
Q ss_pred eEEE
Q 019226 301 ACVI 304 (344)
Q Consensus 301 ~~v~ 304 (344)
..+.
T Consensus 198 ~~~v 201 (211)
T PRK11590 198 RWRV 201 (211)
T ss_pred CEEE
Confidence 9653
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.5e-13 Score=112.99 Aligned_cols=112 Identities=27% Similarity=0.379 Sum_probs=85.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh------------HHHHHHHhhccchhcccceeecccchhhhhccCCcCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 245 (344)
+.+.||+.+.+..|++.||+++++||.+.-. -..++..+ .-.. ..++.
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~g-v~id~------------------ 89 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQG-VKIDG------------------ 89 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcC-Cccce------------------
Confidence 5788999999999999999999999943211 11111111 0000 01233
Q ss_pred ccccccccCCCC-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 246 NRVCVCAHQGDD-VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 246 ~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.-+|+|..++ ..++||++.++..+++++++++++.++|||...|+++|.++|+..+.+.++...
T Consensus 90 --i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~ 154 (181)
T COG0241 90 --ILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGV 154 (181)
T ss_pred --EEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCccc
Confidence 3458888877 678999999999999999999999999999999999999999998877665443
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-13 Score=117.53 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=82.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.++.|+++|++++|+||.....+...++.+ ++..+ +. + .+++++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l-gl~~~------f~------------------------g-----~~~k~~ 99 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTL-GITHL------YQ------------------------G-----QSNKLI 99 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCcee------ec------------------------C-----CCcHHH
Confidence 567778899999999999999899888886 54332 22 2 356789
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC-ccccCHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD-LSNVRLKDLELLL 337 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~ll 337 (344)
.+..+++++|+++++|+||||+.+|+.+++++|+.++ +.+ ........++++++. -..-.+.+|.+++
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~--~~~~~~~~a~~v~~~~~g~g~~~el~~~i 168 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VAD--AHPLLLPRADYVTRIAGGRGAVREVCDLL 168 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCC--hhHHHHHhCCEEecCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999954 432 222222345666642 3333456666544
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.46 E-value=7.2e-14 Score=125.55 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=77.1
Q ss_pred CccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccccee--ecccchhhhhccCCcCCccccccccCCCCC
Q 019226 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF--LADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 181 ~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++++.++++.|+++|+++ ++||.+.......+... +...+ +..+ .+ ++..
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~-~~g~~--~~~i~~~g------------------------~~~~ 191 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRY-GAGYY--AELIKQLG------------------------GKVI 191 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEe-cccHH--HHHHHHhC------------------------CcEe
Confidence 689999999998899997 88999887665444443 33333 2222 22 4445
Q ss_pred CCCCCCHHHHHHHHHHcCCC-CCcEEEEecC-HhhHHHHHHcCCeEEEEeC
Q 019226 259 KQKKPDPSIYVTAAKRLGIS-EKDCLVVEDS-VIGLQAATRAGMACVITYT 307 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~ 307 (344)
..+||+|.+|+.+++++|.. +++|+||||+ .+|+.+|+++|+.+++|.+
T Consensus 192 ~~gKP~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 192 YSGKPYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred cCCCCCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEeC
Confidence 57999999999999999975 6799999999 5899999999999999853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.46 E-value=8.1e-13 Score=117.89 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=73.4
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchhhhccc---cccccCCccc
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKD---AIAIYPDLSN 327 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~---~~~~~~~~~~ 327 (344)
.++.+....+||++.+++.+.++++++|++++||||+.+ ||.-++++|++++++.+|.+..++... ....+||++.
T Consensus 214 ~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~ 293 (306)
T KOG2882|consen 214 ATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYA 293 (306)
T ss_pred HhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHH
Confidence 445566778999999999999999999999999999996 999999999999999999987666543 3456788887
Q ss_pred cCHHHHHHHHHH
Q 019226 328 VRLKDLELLLQN 339 (344)
Q Consensus 328 ~~~~~l~~ll~~ 339 (344)
-.+.++..++++
T Consensus 294 ~~l~d~~~~~~~ 305 (306)
T KOG2882|consen 294 DSLGDLLPLLNN 305 (306)
T ss_pred hhHHHHhhhccC
Confidence 777777766543
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.5e-12 Score=107.26 Aligned_cols=133 Identities=19% Similarity=0.198 Sum_probs=86.5
Q ss_pred hCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCcccccccc
Q 019226 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAH 253 (344)
Q Consensus 175 ~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 253 (344)
...+.+-||+++++..|+++|.+++++|++++.++..+...| +++.-+ ++. |.++. ++|++.
T Consensus 84 ~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L-gi~~~n----~yA---N~l~fd~~Gk~~--------- 146 (227)
T KOG1615|consen 84 KQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL-GIPKSN----IYA---NELLFDKDGKYL--------- 146 (227)
T ss_pred cCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh-CCcHhh----hhh---heeeeccCCccc---------
Confidence 356789999999999999999999999999999999999997 776621 111 11122 244432
Q ss_pred CCCC----CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 254 QGDD----VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 254 ~~~~----~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
+-+ ...+--+++.+..+.+ +...+.++||||+.+|++|..- |..++.........+...++.+.+.+|+.+
T Consensus 147 -gfd~~~ptsdsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 147 -GFDTNEPTSDSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred -ccccCCccccCCccHHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 211 1223335677777766 7888999999999999988765 333333322222223334445555454433
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.2e-13 Score=119.78 Aligned_cols=69 Identities=14% Similarity=0.071 Sum_probs=54.6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+.+..+.+|...+..+++++|++++++++|||+.||+.|++.+|+..++ ++...+....++++.++..+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam---~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV---ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc---CChhHHHHHhcCeecCCCCC
Confidence 3345567889999999999999999999999999999999999999776 33444444567777765443
|
catalyze the same reaction as SPP. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.6e-13 Score=119.16 Aligned_cols=67 Identities=15% Similarity=0.087 Sum_probs=52.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
...+..|+..+..+++++|++++++++|||+.||++|++.+|+..++-+ ...+....++++.++..+
T Consensus 152 ~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~N---a~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 152 KSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVAN---ADEELKEAADYVTEKSYG 218 (230)
T ss_pred eeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecC---ccHHHHHhcceEecCCCc
Confidence 4456778999999999999999999999999999999999999977633 333333456777765443
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.8e-12 Score=114.79 Aligned_cols=50 Identities=26% Similarity=0.407 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcE-EEEecCH-hhHHHHHHcCCeEEEEeCC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDC-LVVEDSV-IGLQAATRAGMACVITYTS 308 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~-i~vGDs~-~Di~~a~~aG~~~v~v~~~ 308 (344)
..+||++.+|+.++++++++++++ +||||+. .|+.+|+++|+.+++|.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 468999999999999999998887 9999998 7999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.4e-12 Score=120.33 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=78.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH----hhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN----LIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~----l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
.+++|+.++|+.|+++|++++|+|+++...+..++++ + ++..+ |+.+..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~-~~~~~--f~~~~~------------------------ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI-LQAED--FDARSI------------------------ 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc-CcHHH--eeEEEE------------------------
Confidence 4688999999999999999999999999999999988 4 33333 344433
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+ .||+++.+..+++++|+.+++++||||+..|+.++++++-.
T Consensus 84 ~-----~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 84 N-----WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred e-----cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 2 68999999999999999999999999999999999997764
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=115.67 Aligned_cols=85 Identities=16% Similarity=0.090 Sum_probs=60.7
Q ss_pred eecccchhhhhccCCc-CCcccccc----c----cCCCC---CCCCCCCHHHHHHHHHHc--------CC-----CCCcE
Q 019226 228 FLADCQSYVLMTNGTL-MPNRVCVC----A----HQGDD---VKQKKPDPSIYVTAAKRL--------GI-----SEKDC 282 (344)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~----~----~~~~~---~~~~KP~~~~~~~~~~~l--------gv-----~~~~~ 282 (344)
++..++|..-.+++++ .|+-..+. . .++.+ ...+||++.+|+.+++.+ ++ +++++
T Consensus 187 ~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 266 (321)
T TIGR01456 187 IYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHAL 266 (321)
T ss_pred EEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheE
Confidence 3444666655554443 45444433 1 23333 356999999999998887 43 45799
Q ss_pred EEEecCH-hhHHHHHHcCCeEEEEeCCCchh
Q 019226 283 LVVEDSV-IGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 283 i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+||||+. .|+.+|+++||.+++|.+|....
T Consensus 267 ~mIGD~~~tDI~ga~~~G~~silV~tG~~~~ 297 (321)
T TIGR01456 267 YMVGDNPASDIIGAQNYGWFSCLVKTGVYNG 297 (321)
T ss_pred EEEcCChhhhhhhHHhCCceEEEecccccCC
Confidence 9999999 69999999999999999886544
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.9e-13 Score=96.06 Aligned_cols=68 Identities=29% Similarity=0.503 Sum_probs=60.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccc
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSN 327 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~ 327 (344)
++||+|.+|..+++++++++++|+||||+ ..|+.+|+++|+.+|+|.++....+.+. .++++++++.+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 48999999999999999999999999999 6899999999999999999887765543 57888888765
|
... |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.7e-11 Score=107.06 Aligned_cols=156 Identities=12% Similarity=0.118 Sum_probs=104.2
Q ss_pred CCccCccHHHHHHHH--HHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEA--KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~L--k~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 253 (344)
.+++.||+.++++.+ ++.|+.+.|+|+++..+++.++++. ++... |+.+++ |...+. +|.+....++ +|
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~-gl~~~--f~~I~T---Npa~~~~~G~l~v~pyh--~h 140 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH-GLRDC--FSEIFT---NPACFDADGRLRVRPYH--SH 140 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC-CCccc--cceEEe---CCceecCCceEEEeCcc--CC
Confidence 478999999999999 4579999999999999999999997 77665 677877 666665 4554322221 12
Q ss_pred CCCCC-CCCCCCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHcCCe-EEEEeCCCchhhhccc-cccc-cCCcc
Q 019226 254 QGDDV-KQKKPDPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRAGMA-CVITYTSSTAEQDFKD-AIAI-YPDLS 326 (344)
Q Consensus 254 ~~~~~-~~~KP~~~~~~~~~~~---lgv~~~~~i~vGDs~~Di~~a~~aG~~-~v~v~~~~~~~~~l~~-~~~~-~~~~~ 326 (344)
. +.. +..-=|...++..++. -|+..++++||||+.||+-.+.+.+-. .|+.-.+..-...+.. +..+ ..=..
T Consensus 141 ~-C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~ 219 (234)
T PF06888_consen 141 G-CSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVP 219 (234)
T ss_pred C-CCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEe
Confidence 2 211 1111146777777766 478889999999999999999998776 4444444443333332 1111 11122
Q ss_pred ccCHHHHHHHHHHhh
Q 019226 327 NVRLKDLELLLQNVV 341 (344)
Q Consensus 327 ~~~~~~l~~ll~~~~ 341 (344)
-.+-.+|.+.|++++
T Consensus 220 W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 220 WSSGEEILEILLQLI 234 (234)
T ss_pred cCCHHHHHHHHHhhC
Confidence 235678888887764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-11 Score=117.63 Aligned_cols=100 Identities=19% Similarity=0.261 Sum_probs=79.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
.+++||+.+++++++++|++++++|++....++.+++++ ++ ||.+++ +++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l-Gl-----Fd~Vig------------------------sd~ 120 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL-GL-----FDGVFA------------------------SDG 120 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CC-----CCEEEe------------------------CCC
Confidence 567899999999999999999999999999999998886 43 588887 676
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
....||+++. +.+.+.++ .++++++||+.+|+.+++.+| ..+.|+.+...
T Consensus 121 ~~~~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~~l 170 (479)
T PRK08238 121 TTNLKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASPGV 170 (479)
T ss_pred ccccCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCHHH
Confidence 6667766543 33445665 366899999999999999999 55667655543
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.8e-12 Score=107.53 Aligned_cols=96 Identities=20% Similarity=0.166 Sum_probs=84.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.++||+.++|+.|+ ++++++|+|++....++.+++++ ++..+ .++.+++ +++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l-~~~~~-~f~~i~~------------------------~~d 96 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL-DPKKY-FGYRRLF------------------------RDE 96 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh-CcCCC-EeeeEEE------------------------Ccc
Confidence 688999999999999 57999999999999999999887 55432 1577777 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+...||+ |.++++++|++|++|++|||+.+|++++.++|+.+-
T Consensus 97 ~~~~KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 97 CVFVKGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ccccCCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 8888997 999999999999999999999999999999998753
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.33 E-value=6.2e-12 Score=123.35 Aligned_cols=94 Identities=20% Similarity=0.285 Sum_probs=76.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCCh------------hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATK------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.++||+.+.|+.|++.||+++|+||... ..+..+++.+ ++. |+.+++
T Consensus 197 ~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~l-gip----fdviia---------------- 255 (526)
T TIGR01663 197 IIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKL-GVP----FQVFIA---------------- 255 (526)
T ss_pred ecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHc-CCc----eEEEEe----------------
Confidence 3689999999999999999999999766 2355566665 432 466666
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
.++...+||++.++..++++++ +++++++||||...|+++++++|..
T Consensus 256 --------~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~~ 306 (526)
T TIGR01663 256 --------IGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGKK 306 (526)
T ss_pred --------CCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCCC
Confidence 5566678999999999999985 8999999999999998887777753
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.6e-11 Score=112.28 Aligned_cols=54 Identities=11% Similarity=0.032 Sum_probs=45.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+..+ .+...++.+++.+|+++ +++++|||+.||++|++.+|+.+++-+......
T Consensus 186 ~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k 240 (273)
T PRK00192 186 LGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNP 240 (273)
T ss_pred eCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCc
Confidence 3344 67789999999999999 999999999999999999999998866554444
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-10 Score=106.18 Aligned_cols=78 Identities=10% Similarity=0.129 Sum_probs=59.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
-+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+.+..++++.++..+ .-+.+.
T Consensus 190 I~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~NA~~~vK~~A~~vt~~n~~---dGva~~ 263 (270)
T PRK10513 190 ILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM---GNAIPSVKEVAQFVTKSNLE---DGVAFA 263 (270)
T ss_pred EeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe---cCccHHHHHhcCeeccCCCc---chHHHH
Confidence 345567789999999999999999999999999999999999999877 34444455567887765443 334455
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
++++
T Consensus 264 i~~~ 267 (270)
T PRK10513 264 IEKY 267 (270)
T ss_pred HHHH
Confidence 5444
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.7e-10 Score=93.35 Aligned_cols=107 Identities=19% Similarity=0.269 Sum_probs=83.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh-cccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..+||++.+.|++.++.|+++.|.|.+.....+..+.+- ...++ ..|+.++.
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs-~agdL~~lfsGyfD-------------------------- 154 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHS-DAGDLNSLFSGYFD-------------------------- 154 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhccc-ccccHHhhhcceee--------------------------
Confidence 479999999999999999999999999987666555443 11111 01232222
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
..-..|-....|.++++..|++|.+++|+.|.++.+.+|+.+||.++.+.++...
T Consensus 155 ttiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~ 209 (229)
T COG4229 155 TTIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNA 209 (229)
T ss_pred ccccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCC
Confidence 1222577788999999999999999999999999999999999999988776643
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.2e-11 Score=103.15 Aligned_cols=108 Identities=15% Similarity=0.166 Sum_probs=80.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhh---------------HHHHHHHhhccchhcccceeecccchhhhhccCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS---------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~---------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~ 243 (344)
.+.|+...++.+|++.|++++|||-++... ++..++.- ..+ ...+.+++
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s-~~~--~~i~~~~~------------- 138 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKS-KCD--FKIKKVYA------------- 138 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhc-Ccc--ceeeeeee-------------
Confidence 577888999999999999999999887743 33333321 100 01222332
Q ss_pred CCccccccccCCC------CCCCCCCCHHH--H--HHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 244 MPNRVCVCAHQGD------DVKQKKPDPSI--Y--VTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 244 ~~~~~~~~~~~~~------~~~~~KP~~~~--~--~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++|..=. .++..||+|.+ | ++++++.|+.|++|+||+|+..++++|++.|+.++.+.++
T Consensus 139 ------yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 139 ------YYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ------eCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 2222111 24678999999 9 9999999999999999999999999999999999987643
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=103.76 Aligned_cols=107 Identities=15% Similarity=0.176 Sum_probs=80.6
Q ss_pred HHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccc
Q 019226 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 171 ~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
+.+....+.+.||+.++++.|+++|++++|+|++....++.+++++ ++... +..+++ |++.+.
T Consensus 113 ~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~l-gl~~~--~~~IvS---N~L~f~----------- 175 (277)
T TIGR01544 113 EIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQA-GVYHP--NVKVVS---NFMDFD----------- 175 (277)
T ss_pred HHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHc-CCCCc--CceEEe---eeEEEC-----------
Confidence 3333346899999999999999999999999999999999999987 55432 244544 333332
Q ss_pred cccCCCCCCCCCCCH---------HHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 019226 251 CAHQGDDVKQKKPDP---------SIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~---------~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~a 298 (344)
.+.+..++|.| ..++.+++.++ +++++|++|||+.+|+.||...
T Consensus 176 ----~dGvltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 176 ----EDGVLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCCeEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 12222344555 66777888998 8899999999999999997766
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-11 Score=106.40 Aligned_cols=65 Identities=14% Similarity=0.058 Sum_probs=51.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS 326 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~ 326 (344)
..+..+...++.+++++|++++++++|||+.||++|++.+|+..++-+ ..++....++++.++-.
T Consensus 143 ~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~n---a~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 143 KKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVAN---ADDQLKEIADYVTSNPY 207 (215)
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCC---ccHHHHHhCCEEcCCCC
Confidence 345667889999999999999999999999999999999999987743 33333344667766433
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.6e-11 Score=101.84 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=69.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeC-CChhhHHHHHHHhhccchhccc----ceeecccchhhhhccCCcCCcccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSA-ATKSSVILCLENLIGMERFEGL----DCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn-~~~~~~~~~l~~l~~~~~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
.+.+||++.++|+.|+.+|++++++|- .....++.+++.+ ++...... ..++.
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l-~i~~~~~~~~~~~~~F~--------------------- 100 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLL-EIDDADGDGVPLIEYFD--------------------- 100 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHT-T-C----------CCEC---------------------
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhc-CCCccccccccchhhcc---------------------
Confidence 478999999999999999999999994 4566788888886 66511000 01111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
.-+.. .-.+...|..+.++.|++.++++||+|-..++....+.|..+|.+.+|-+
T Consensus 101 ---~~eI~-~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 101 ---YLEIY-PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp ---EEEES-SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred ---hhhee-cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 11122 23678999999999999999999999999999999999999999987544
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.9e-10 Score=111.55 Aligned_cols=78 Identities=14% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
-+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....++++.++..+ +-+.+.
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM---gNA~eeVK~~Ad~VT~sNdE---DGVA~a 574 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL---SNGAEKTKAVADVIGVSNDE---DGVADA 574 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe---CCCCHHHHHhCCEEeCCCCc---CHHHHH
Confidence 345566789999999999999999999999999999999999999877 34444445567777765433 445555
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
|++.
T Consensus 575 Lek~ 578 (580)
T PLN02887 575 IYRY 578 (580)
T ss_pred HHHh
Confidence 5543
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.3e-10 Score=103.52 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=57.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccc--ccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~ 335 (344)
+..+-.|...++.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....+++ ++++.. ..-+.+
T Consensus 183 ~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm---~Na~~~vK~~A~~~~v~~~n~---edGva~ 256 (272)
T PRK15126 183 LPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM---GNAMPQLRAELPHLPVIGHCR---NQAVSH 256 (272)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec---cCChHHHHHhCCCCeecCCCc---chHHHH
Confidence 44556679999999999999999999999999999999999998776 3333334444443 554432 345566
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
.|++.+
T Consensus 257 ~l~~~~ 262 (272)
T PRK15126 257 YLTHWL 262 (272)
T ss_pred HHHHHh
Confidence 665544
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.4e-10 Score=94.45 Aligned_cols=160 Identities=14% Similarity=0.177 Sum_probs=102.7
Q ss_pred CCccCccHHHHHHHHHHcCC-eEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccC
Q 019226 177 TVEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQ 254 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~-~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 254 (344)
.+.+.||+.++++.+++.|. .+.|+|..+..+++++++++ ++..+ |..+++ |+..+. +|.|.--.++ .+|.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~-~~~d~--F~~IfT---NPa~~da~G~L~v~pyH-~~hs 154 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA-GIHDL--FSEIFT---NPACVDASGRLLVRPYH-TQHS 154 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc-cHHHH--HHHHhc---CCcccCCCCcEEeecCC-CCCc
Confidence 47899999999999999985 99999999999999999998 77776 567766 555555 5555432232 1121
Q ss_pred CCCCCCCCCCHHHHHHHHHH---cCCCCCcEEEEecCHhhHHHHHHc-CCeEEEEeCCCchhhhcc-ccccccCCccc-c
Q 019226 255 GDDVKQKKPDPSIYVTAAKR---LGISEKDCLVVEDSVIGLQAATRA-GMACVITYTSSTAEQDFK-DAIAIYPDLSN-V 328 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~---lgv~~~~~i~vGDs~~Di~~a~~a-G~~~v~v~~~~~~~~~l~-~~~~~~~~~~~-~ 328 (344)
..-....-=+...++.+... -|+..++.+||||+.||+-..... +...++.-.+........ ++...-.++.+ -
T Consensus 155 C~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~ 234 (256)
T KOG3120|consen 155 CNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWS 234 (256)
T ss_pred cCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecc
Confidence 11111111134455544433 377788999999999999776665 445555444444332211 12222222222 2
Q ss_pred CHHHHHHHHHHhhhc
Q 019226 329 RLKDLELLLQNVVAA 343 (344)
Q Consensus 329 ~~~~l~~ll~~~~~~ 343 (344)
+-.++..+|++++++
T Consensus 235 sg~d~~~~L~~lik~ 249 (256)
T KOG3120|consen 235 SGEDLERILQQLIKT 249 (256)
T ss_pred cHHHHHHHHHHHHHH
Confidence 568899999988765
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.4e-10 Score=100.83 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=57.1
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccc--cccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAI--AIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~ 335 (344)
+..+-.|...++.+++++|++++++++|||+.||++|.+.+|...++- +...+....++ ++.++. +..-+.+
T Consensus 185 ~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~---NA~~~vK~~A~~~~v~~~n---~edGVa~ 258 (266)
T PRK10976 185 MAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG---NAHQRLKDLLPELEVIGSN---ADDAVPH 258 (266)
T ss_pred EcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec---CCcHHHHHhCCCCeecccC---chHHHHH
Confidence 445666799999999999999999999999999999999999998773 33333334443 555543 2345666
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
.|++++
T Consensus 259 ~l~~~~ 264 (266)
T PRK10976 259 YLRKLY 264 (266)
T ss_pred HHHHHh
Confidence 665543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.3e-10 Score=103.07 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=55.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+..|....+.+++++|++++++++|||+.||++|.+.+|...++-+ ..++....++++..+-.+ ..+.+.+
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~N---a~~~~k~~A~~vt~~n~~---~Gv~~~l 257 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGN---ADEELKELADYVTTSNDE---DGVAEAL 257 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccC---CCHHHHhhCCcccCCccc---hHHHHHH
Confidence 4567778999999999999999999999999999999999999988733 333333344544343332 4455555
Q ss_pred HHh
Q 019226 338 QNV 340 (344)
Q Consensus 338 ~~~ 340 (344)
++.
T Consensus 258 ~~~ 260 (264)
T COG0561 258 EKL 260 (264)
T ss_pred HHH
Confidence 444
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.9e-09 Score=92.68 Aligned_cols=107 Identities=12% Similarity=-0.024 Sum_probs=70.7
Q ss_pred CccCccHHHHHH-HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMD-EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~-~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+ .++++|++++|+||.....++.+.+..+.+.. +.+++ .-+++.+|+.. ..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~---t~le~~~gg~~----------~g 155 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIA---SQIERGNGGWV----------LP 155 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEE---EEeEEeCCceE----------cC
Confidence 468999999996 78889999999999999989988877411121 23333 12333343211 11
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
....+.-|.. .+.+.++.+.+.+.+.|||.+|+.|...+|-..+.
T Consensus 156 ~~c~g~~Kv~---rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 156 LRCLGHEKVA---QLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred ccCCChHHHH---HHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 1111222222 33334465677889999999999999999999653
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-09 Score=102.24 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=84.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhc-------cchhcccceeeccc--chhhhhccCCcCCcc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG-------MERFEGLDCFLADC--QSYVLMTNGTLMPNR 247 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~-------~~~~~~~d~~~~~~--~~~~~~~~~~~~~~~ 247 (344)
.+..+||+.++|+.|+++|++++|+||+....++.+++.+++ +..+ ||.+++-+ |.|-. + .+
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~--~-----~~ 252 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFT--E-----GR 252 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccC--C-----CC
Confidence 356799999999999999999999999999999999999744 5555 67776621 11100 0 01
Q ss_pred cccc--ccCCCCCC-C---CCC----CHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEeC
Q 019226 248 VCVC--AHQGDDVK-Q---KKP----DPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYT 307 (344)
Q Consensus 248 ~~~~--~~~~~~~~-~---~KP----~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~-~aG~~~v~v~~ 307 (344)
.+.+ ..++.... . -+| ..--.....+.+|+.+++|+||||+. .|+.+++ .+||.+++|..
T Consensus 253 pf~~v~~~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 253 PFRQVDVETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred ceEEEeCCCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 1110 10010000 0 011 01235677888999999999999999 5999998 99999999864
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.7e-09 Score=97.52 Aligned_cols=82 Identities=7% Similarity=-0.078 Sum_probs=57.8
Q ss_pred CCCCCCCHHHHHHHHHHcCC---CCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc----cccccccCCccccCH
Q 019226 258 VKQKKPDPSIYVTAAKRLGI---SEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNVRL 330 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv---~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l----~~~~~~~~~~~~~~~ 330 (344)
+..+-.|....+.+++.+|+ +++++++|||+.||++|.+.+|...++-+.. ...+.+ ..++++.+. ...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~-~~~~~l~~~~~~~~~~~~~---~~~ 257 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLN-REGVHLQDDDPARVYRTQR---EGP 257 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCC-CCCcccccccCCceEeccC---CCc
Confidence 44566788999999999999 9999999999999999999999998764322 111122 234444444 233
Q ss_pred HHHHHHHHHhhhc
Q 019226 331 KDLELLLQNVVAA 343 (344)
Q Consensus 331 ~~l~~ll~~~~~~ 343 (344)
+.+.+.++.++.+
T Consensus 258 ~g~~~~l~~~~~~ 270 (271)
T PRK03669 258 EGWREGLDHFFSA 270 (271)
T ss_pred HHHHHHHHHHHhc
Confidence 5666666665543
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.2e-09 Score=89.84 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=65.7
Q ss_pred ccCccHHHHHHHHHHcCC--eEEEEeCCC-------hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 179 EPRPGVLRLMDEAKAAGK--KVAVCSAAT-------KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~--~v~ivTn~~-------~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
.+.|.+.+.++++++.+. +++|+||+. ...++.+.+.+ ++ ..+.-
T Consensus 59 ~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~l-gI------pvl~h------------------- 112 (168)
T PF09419_consen 59 EIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKAL-GI------PVLRH------------------- 112 (168)
T ss_pred cCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhh-CC------cEEEe-------------------
Confidence 455566677777777755 599999984 44444444443 32 22221
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCC-----CCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCC
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGI-----SEKDCLVVEDSV-IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv-----~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~ 309 (344)
...|| ..++.+++.++. .|+++++|||.. .|+.+|...|+.+||+..|.
T Consensus 113 ---------~~kKP--~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 113 ---------RAKKP--GCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred ---------CCCCC--ccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 12566 556666666654 499999999999 59999999999999998774
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3e-10 Score=95.93 Aligned_cols=55 Identities=20% Similarity=0.384 Sum_probs=50.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
...+||++.+|+.+++.+|++|++|+||||..+ |+-+|+++||..+.|.+|-...
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rp 232 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRP 232 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCC
Confidence 346899999999999999999999999999997 9999999999999998876543
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.3e-09 Score=91.40 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=64.4
Q ss_pred Ccc-CccHHHHHHHHHHcCCeEEEEeCCChh-------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEP-RPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~-~pgv~~~l~~Lk~~g~~v~ivTn~~~~-------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
+.. .|++.+.|++|.+.||+++|+||...- ....+.+++..+-.- ++..+. ++
T Consensus 27 ~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~--l~ip~~-----------------~~ 87 (159)
T PF08645_consen 27 WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE--LGIPIQ-----------------VY 87 (159)
T ss_dssp GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH--CTS-EE-----------------EE
T ss_pred hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH--cCCceE-----------------EE
Confidence 344 458999999999999999999996321 222222222111000 111111 12
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCC----CCCcEEEEecC-----------HhhHHHHHHcCCeEE
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGI----SEKDCLVVEDS-----------VIGLQAATRAGMACV 303 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv----~~~~~i~vGDs-----------~~Di~~a~~aG~~~v 303 (344)
+|++. -..+||.+-|++.+++.++. +.++++||||. -.|.+-|.++|++..
T Consensus 88 ~a~~~---d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 88 AAPHK---DPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp ECGCS---STTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred ecCCC---CCCCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 22222 26799999999999999874 89999999996 579999999999853
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.7e-09 Score=92.95 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=52.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+..+-.|...++.+++.+|++++++++|||+.||++|++.+|+.+++- .........++++.++..+
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~---na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG---NADEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec---CchHHHHHhCCEEecCCCC
Confidence 445667899999999999999999999999999999999999997763 2233333446677665443
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.5e-09 Score=91.92 Aligned_cols=43 Identities=14% Similarity=-0.010 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+-.++.....+++++|++++++++|||+.||++|.+.+|...+
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 3346678999999999999999999999999999999998865
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.1e-09 Score=93.53 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=46.0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
+.+..+.++...++.+++++|+++++|++|||+.||++|++.+|..++.+.+..
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 445678899999999999999999999999999999999999776666665443
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.4e-09 Score=89.55 Aligned_cols=98 Identities=18% Similarity=0.341 Sum_probs=61.4
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK 261 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (344)
|++.++|+.+++.|++++|+|++....++.+++.+ ++.... +++. . +...+|....++.. +...+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~-~i~~~~----v~~~--~-~~~~~~~~~~~~~~-----~~~~~-- 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERL-GIDDDN----VIGN--E-LFDNGGGIFTGRIT-----GSNCG-- 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHT-TSSEGG----EEEE--E-EECTTCCEEEEEEE-----EEEES--
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHc-CCCceE----EEEE--e-eeecccceeeeeEC-----CCCCC--
Confidence 55559999999999999999999999999998876 655421 2220 0 00000000000000 00000
Q ss_pred CCCHHHHHHH---HHHcCCCCCcEEEEecCHhhHHHHH
Q 019226 262 KPDPSIYVTA---AKRLGISEKDCLVVEDSVIGLQAAT 296 (344)
Q Consensus 262 KP~~~~~~~~---~~~lgv~~~~~i~vGDs~~Di~~a~ 296 (344)
-+...+..+ ... ++..+.+++|||+.+|+.|++
T Consensus 157 -~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 -GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred -cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 145555555 334 888999999999999999875
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.6e-08 Score=91.33 Aligned_cols=87 Identities=20% Similarity=0.293 Sum_probs=62.5
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH---HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~---~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
....++||+.++|+.|+++|++++++||....... ..++.+ ++... ..+.++.
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~-Gi~~~-~~d~lll---------------------- 170 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRF-GFPQA-DEEHLLL---------------------- 170 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHc-CcCCC-CcceEEe----------------------
Confidence 44689999999999999999999999998754433 445554 54432 1344444
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHH
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAA 295 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a 295 (344)
.++ .++++.....+.+..++ +++|||..+|+...
T Consensus 171 --r~~---~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 --KKD---KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred --CCC---CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 322 35667777778776666 89999999999654
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.93 E-value=5.6e-09 Score=93.40 Aligned_cols=49 Identities=16% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+.+..+++|+..++.+++++|++++++++|||+.||+.|++.+|...++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 3456678999999999999999999999999999999999999988765
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.4e-09 Score=97.21 Aligned_cols=66 Identities=21% Similarity=0.183 Sum_probs=52.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
..+-.+..+.+.+++.+|++++++++|||+.||++|.+.+|...++ ++...+....++++.++-.+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am---~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM---GNATPELKKAADYITPSNND 247 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE---TTS-HHHHHHSSEEESSGTC
T ss_pred eCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE---cCCCHHHHHhCCEEecCCCC
Confidence 3455678999999999999999999999999999999999999776 44444444556777776554
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.1e-09 Score=88.63 Aligned_cols=82 Identities=17% Similarity=0.304 Sum_probs=69.4
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
-++.|.+.|++++|+|+.+...++.-.+.+ ++..+ +. | .+.+-.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~L-GI~~~------~q------------------------G-----~~dK~~ 86 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDL-GIKHL------YQ------------------------G-----ISDKLA 86 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHc-CCcee------ee------------------------c-----hHhHHH
Confidence 456778889999999999999999999987 65443 33 2 234568
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.|..+++++++.+++|.||||..+|+.+..+.|..++.
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 89999999999999999999999999999999999764
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.8e-09 Score=94.15 Aligned_cols=49 Identities=18% Similarity=0.405 Sum_probs=43.5
Q ss_pred ccC-ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec
Q 019226 179 EPR-PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230 (344)
Q Consensus 179 ~~~-pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~ 230 (344)
++. ||+.++|++|+++|++++|+|++.+..+...++.+ ++..+ |+.+++
T Consensus 145 ~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l-GLd~Y--FdvIIs 194 (301)
T TIGR01684 145 RIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV-KLDRY--FDIIIS 194 (301)
T ss_pred ccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc-CCCcc--cCEEEE
Confidence 344 89999999999999999999999999999999997 88876 677777
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.85 E-value=9.3e-08 Score=79.46 Aligned_cols=111 Identities=18% Similarity=0.213 Sum_probs=74.9
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc-cCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA-HQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 255 (344)
.+.+.||..++++.+++++++++|+|++-...++.+++.+.+-++....|.+.. |-...|..-..|- +-.
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn---------~~~ih~dg~h~i~~~~d 141 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSN---------NDYIHIDGQHSIKYTDD 141 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeec---------CceEcCCCceeeecCCc
Confidence 378999999999999999999999999999999999999876666533333322 1111111111220 011
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
+..++.|| . ..+.+.-+++.++|.||+..|+.+|+....-+
T Consensus 142 s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllF 182 (220)
T COG4359 142 SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLF 182 (220)
T ss_pred cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHh
Confidence 22334443 2 34455556777999999999999998876543
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.78 E-value=3e-08 Score=86.50 Aligned_cols=46 Identities=20% Similarity=0.096 Sum_probs=42.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
++.+.+|+..++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 4567889999999999999999999999999999999999999865
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.2e-07 Score=84.14 Aligned_cols=50 Identities=10% Similarity=-0.021 Sum_probs=43.9
Q ss_pred CCCCCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEEeC
Q 019226 258 VKQKKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYT 307 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~--~~~~i~vGDs~~Di~~a~~aG~~~v~v~~ 307 (344)
+..+-.+....+.+++.+|++ .+++++|||+.||+.|.+.+|...++-+.
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 344567788899999999999 99999999999999999999999887543
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.1e-07 Score=95.70 Aligned_cols=106 Identities=16% Similarity=0.178 Sum_probs=76.8
Q ss_pred CccCccHHHHHHHHHHcC-CeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++| ++++++||.....++..++++ ++..+ +. .
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l-gi~~~------f~------------------------~- 430 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL-GIDEV------HA------------------------E- 430 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh-CCCee------ec------------------------c-
Confidence 469999999999999999 999999999999999999997 65433 22 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
.. ++++++ ++++++..+++|+||||+.||+.++++||+.+.+ +.........++.++.+
T Consensus 431 ~~--p~~K~~----~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~Ad~vi~~ 489 (556)
T TIGR01525 431 LL--PEDKLA----IVKELQEEGGVVAMVGDGINDAPALAAADVGIAM---GAGSDVAIEAADIVLLN 489 (556)
T ss_pred CC--HHHHHH----HHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe---CCCCHHHHHhCCEEEeC
Confidence 01 123333 4455555678999999999999999999965544 33333333456666664
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=4.3e-07 Score=90.91 Aligned_cols=44 Identities=5% Similarity=-0.049 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--ecCHhhHHHHHHcCCeEEE
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVV--EDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~v--GDs~~Di~~a~~aG~~~v~ 304 (344)
+-.|....+.+++.+|++.++++.| ||+.||+.|.+.+|...++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 5577899999999999999999998 9999999999999998765
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.2e-07 Score=80.68 Aligned_cols=41 Identities=7% Similarity=-0.010 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHcCC--CCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 263 PDPSIYVTAAKRLGI--SEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 263 P~~~~~~~~~~~lgv--~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
.++.....+++.+++ .+++|++|||+.||+.|.+.+|+..+
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 346667777777765 67799999999999999999999865
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.7e-07 Score=83.52 Aligned_cols=102 Identities=23% Similarity=0.295 Sum_probs=66.4
Q ss_pred ccC-ccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCc--CC-cccc-----
Q 019226 179 EPR-PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL--MP-NRVC----- 249 (344)
Q Consensus 179 ~~~-pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~--~~-~~~~----- 249 (344)
++. |++.++|++|+++|++++|+||+.+..+...++.+ ++..+ |+.+++ +|.. .. .+.+
T Consensus 147 ~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l-gL~~y--FDvII~---------~g~i~~k~~~~~~~d~~~ 214 (303)
T PHA03398 147 RIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET-KLEGY--FDIIIC---------GGRKAGEYSRRVIVDNKY 214 (303)
T ss_pred ccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc-CCCcc--ccEEEE---------CCCcccccccceeecccc
Confidence 344 89999999999999999999999999999999997 77766 576666 1111 00 0000
Q ss_pred ---cc-ccCCCCCC--CCCC-CHHHHHHHHHHcCCCC-CcEEEEecCH-hhH
Q 019226 250 ---VC-AHQGDDVK--QKKP-DPSIYVTAAKRLGISE-KDCLVVEDSV-IGL 292 (344)
Q Consensus 250 ---~~-~~~~~~~~--~~KP-~~~~~~~~~~~lgv~~-~~~i~vGDs~-~Di 292 (344)
+. .-+--++. ..-| +|+.....+++.|+.. ..+-.|+|-. ||+
T Consensus 215 ~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 215 KMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred eeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 00 00000111 1233 4788888899999874 5555677766 454
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.2e-07 Score=90.96 Aligned_cols=104 Identities=20% Similarity=0.254 Sum_probs=76.0
Q ss_pred CccCccHHHHHHHHHHcCC-eEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~-~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
-.++||+.+++++|+++|+ +++++||.....++..++++ +++.+ +. .
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l-gi~~~------f~-------------------------~ 408 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL-GIDEV------HA-------------------------E 408 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc-CChhh------hh-------------------------c
Confidence 3688999999999999999 99999999999999999997 66543 11 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC-Cchhhhcccccccc
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS-STAEQDFKDAIAIY 322 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~-~~~~~~l~~~~~~~ 322 (344)
.. +.++ ..++++++...++++||||+.||+.++++||+...+ + .........++.++
T Consensus 409 ~~--p~~K----~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~---g~~~~~~~~~~ad~vl 466 (536)
T TIGR01512 409 LL--PEDK----LEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM---GASGSDVAIETADVVL 466 (536)
T ss_pred cC--cHHH----HHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe---CCCccHHHHHhCCEEE
Confidence 11 1222 345566666668999999999999999999975443 3 22223333455555
|
. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.6e-08 Score=81.80 Aligned_cols=98 Identities=12% Similarity=0.142 Sum_probs=80.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch-hcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+...||+.++|+.|++. +.++|.|++....++.+++.+ +... + ++.++. .+
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l-dp~~~~--f~~~l~------------------------r~ 92 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL-DRGGKV--ISRRLY------------------------RE 92 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH-CcCCCE--EeEEEE------------------------cc
Confidence 67899999999999988 999999999999999999987 4332 3 455555 55
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
+....+|+ |.+.+..+|.++++|++|||++.|+.++..+|+.+....
T Consensus 93 ~~~~~~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 93 SCVFTNGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred ccEEeCCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 55445555 677888899999999999999999999999998876443
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.2e-07 Score=81.04 Aligned_cols=92 Identities=14% Similarity=0.229 Sum_probs=71.8
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH--HHHHHhhccch-hcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI--LCLENLIGMER-FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~--~~l~~l~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
...++||+.++|+.|+++|++++++||+.+.... ..++++ ++.. . ++.+++
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~-gl~~~~--~~~Ii~----------------------- 75 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL-GINADL--PEMIIS----------------------- 75 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC-CCCccc--cceEEc-----------------------
Confidence 3578999999999999999999999998877655 566775 6554 3 577776
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+++... ..+..+++++++++++|++|||+..|++....+|.
T Consensus 76 -s~~~~~-----~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 76 -SGEIAV-----QMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -cHHHHH-----HHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 444321 56777778889999999999999999887755544
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.46 E-value=9.3e-07 Score=88.90 Aligned_cols=104 Identities=14% Similarity=0.207 Sum_probs=74.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++++.|+++|++++++||.....++...+++ +++ ++. +.
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l-gi~-------~~~-------------------------~~ 450 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL-GIN-------VRA-------------------------EV 450 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc-CCc-------EEc-------------------------cC
Confidence 358999999999999999999999999999999999887 653 222 11
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 323 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 323 (344)
. ++++.+.+ +++..++++|+||||+.||+.++++||+...+ +.........++.++.
T Consensus 451 ~--p~~K~~~v----~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~---g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 451 L--PDDKAALI----KELQEKGRVVAMVGDGINDAPALAQADVGIAI---GAGTDVAIEAADVVLM 507 (562)
T ss_pred C--hHHHHHHH----HHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe---CCcCHHHHhhCCEEEe
Confidence 1 23344444 44444678999999999999999999986433 2222233344566664
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.41 E-value=4.1e-06 Score=80.92 Aligned_cols=47 Identities=17% Similarity=0.139 Sum_probs=40.4
Q ss_pred CCCCCCCHHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcC-CeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAG-MACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~l---gv~~~~~i~vGDs~~Di~~a~~aG-~~~v~ 304 (344)
+..+-.|...++.+++++ |++++++++|||+.||++|.+.+| ...++
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 344556789999999999 999999999999999999999999 56554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.8e-06 Score=75.56 Aligned_cols=68 Identities=13% Similarity=-0.080 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc-------CCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA-------GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a-------G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
|...+..+++++++.++++++|||+.+|+.|++.+ |..++.+..+. ....+.+++++ +.++.++
T Consensus 168 Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~----~~~~A~~~~~~-----~~~v~~~ 238 (244)
T TIGR00685 168 KGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS----KKTVAKFHLTG-----PQQVLEF 238 (244)
T ss_pred HHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC----cCCCceEeCCC-----HHHHHHH
Confidence 46999999999999999999999999999999999 66677775332 12235666664 4556666
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
|+.+
T Consensus 239 L~~l 242 (244)
T TIGR00685 239 LGLL 242 (244)
T ss_pred HHHH
Confidence 6544
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.1e-05 Score=69.57 Aligned_cols=124 Identities=16% Similarity=0.177 Sum_probs=89.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
..++++.+.++..+..|++++|.|.+.....+.++.+- +-.. .-.++. |. +....
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s-~~gd---l~~y~~----------gy-----------fDt~i 177 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYS-DAGD---LRKYIS----------GY-----------FDTTI 177 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHccc-Ccch---HHHHhh----------hh-----------hhccc
Confidence 78999999999999999999999999988666665543 1111 111121 00 01122
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc--cccccccCCcccc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF--KDAIAIYPDLSNV 328 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l--~~~~~~~~~~~~~ 328 (344)
+ .|-....|..+.+.+|.++++++++-|......+|+.+|..+..+.++.+..... ...-.++.+|..+
T Consensus 178 G-~K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 178 G-LKVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred c-ceehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 2 6777899999999999999999999999999999999999998887776643221 2223455555544
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.2e-06 Score=72.33 Aligned_cols=104 Identities=14% Similarity=0.305 Sum_probs=58.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChh-------hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKS-------SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~-------~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
..++.||+.++|++|.++|+.+.++|..... .....++++++...+ -+.+++
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~--~~~~~~------------------- 129 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPY--DNLIFT------------------- 129 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHH--CCEEEE-------------------
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCch--heEEEe-------------------
Confidence 4689999999999999999888888776543 223334333222121 122222
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++ | . .++.+ ++|+|++..+..+...|+.+++...+.+.... ....+.++.|+
T Consensus 130 -----~~-----K--~--------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei 181 (191)
T PF06941_consen 130 -----GD-----K--T--------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEI 181 (191)
T ss_dssp -----SS-----G--G--------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSH
T ss_pred -----cC-----C--C--------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHH
Confidence 11 1 0 12222 89999999999999999999999877664332 23344455443
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.32 E-value=4.3e-06 Score=64.51 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=29.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++||+.++++.|+++|+++.++||+.........+++
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 68999999999999999999999999866555555554
|
... |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.4e-06 Score=88.84 Aligned_cols=88 Identities=17% Similarity=0.252 Sum_probs=71.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.+.+++|++.|++++++|+.....++.+.+.+ ++.. ++. + -
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l-gi~~------~~~------------------------~-~- 696 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA-GIDE------VIA------------------------G-V- 696 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCCE------EEe------------------------C-C-
Confidence 57899999999999999999999999999888888886 5543 222 1 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
. |+....++++++..+++++||||+.||+.++++||+...+
T Consensus 697 ---~--p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~ 737 (834)
T PRK10671 697 ---L--PDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM 737 (834)
T ss_pred ---C--HHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe
Confidence 1 2334567777887889999999999999999999996554
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.2e-06 Score=65.88 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=85.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
-++|+.+.+.+++|++. +.++|.|+.....+....+.. +++. +.+..
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~-gi~~----~rv~a--------------------------- 75 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFV-GIPV----ERVFA--------------------------- 75 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHc-CCce----eeeec---------------------------
Confidence 47999999999999999 999999998887777777665 4322 22322
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
--+++.-..+++.|+-+-+.|+||||+.||+.+.++|....+.+-........+..++.++.+
T Consensus 76 ----~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 76 ----GADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred ----ccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 234677889999998888999999999999999999999877666555544445566666654
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=70.31 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=30.2
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS 208 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~ 208 (344)
....+.|++.++++.|+++|++|+++||.....
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 456899999999999999999999999998765
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.3e-06 Score=74.71 Aligned_cols=51 Identities=20% Similarity=0.188 Sum_probs=38.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+.+--|....+.+++++++++++++++|||.||+.|. ..+...|.|.+...
T Consensus 161 P~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 161 PKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQP 211 (247)
T ss_dssp ETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-H
T ss_pred cCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCCH
Confidence 3444568999999999999999999999999999999 67777777754433
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.27 E-value=9e-07 Score=78.66 Aligned_cols=41 Identities=29% Similarity=0.366 Sum_probs=32.9
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
....+.||+.++++.++++|++|+++||.........++.|
T Consensus 112 ~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL 152 (229)
T PF03767_consen 112 GKAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL 152 (229)
T ss_dssp TGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH
T ss_pred ccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH
Confidence 34589999999999999999999999998766544444444
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.9e-05 Score=71.70 Aligned_cols=50 Identities=10% Similarity=-0.091 Sum_probs=37.2
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 261 KKPDPSIYVTAAKRLGIS--EKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~--~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.-++....+.+.+.+.-. +-.++.+||++||+.|...+-...| |.++...
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vv-i~~~~~~ 257 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVV-LPSPIAD 257 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEE-ecCCCCC
Confidence 345677777777776543 4478889999999999999999965 5555443
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7.1e-06 Score=64.55 Aligned_cols=80 Identities=18% Similarity=0.305 Sum_probs=63.9
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.+.++|.|.+++..+|..|+-+..+|=+....+.+.++.+ ++..+ |+..+.
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral-~~~~y--Fhy~Vi-------------------------- 89 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL-DLLQY--FHYIVI-------------------------- 89 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh-chhhh--EEEEEe--------------------------
Confidence 4789999999999999999999999998988898999987 77777 576655
Q ss_pred CCCCCCCCH---HHHHHHHHHc------CCCCCcEEEEecCHh
Q 019226 257 DVKQKKPDP---SIYVTAAKRL------GISEKDCLVVEDSVI 290 (344)
Q Consensus 257 ~~~~~KP~~---~~~~~~~~~l------gv~~~~~i~vGDs~~ 290 (344)
+|.| .|+.++++.+ .+.|.+++|++|..-
T Consensus 90 -----ePhP~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i 127 (164)
T COG4996 90 -----EPHPYKFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127 (164)
T ss_pred -----cCCChhHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence 4443 4455555543 467999999999874
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.2e-05 Score=70.55 Aligned_cols=41 Identities=22% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
...++.|++.++.+.++++|++|+++||.+...-....++|
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL 182 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL 182 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH
Confidence 45689999999999999999999999999875444444444
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=4.5e-05 Score=69.48 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=50.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc----CCeEEEEeCCCchhhhccccccccCCccccCHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 334 (344)
..+..|.....++++.+|+..+++++|||+.||..|.+.+ |.. |.+.... ..+.+.+++ +.++.
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vavg~a~------~~A~~~l~~-----~~~v~ 237 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKVGTGA------TQASWRLAG-----VPDVW 237 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEECCCC------CcCeEeCCC-----HHHHH
Confidence 3445678999999999999999999999999999999988 555 4443332 124555554 44455
Q ss_pred HHHHHhh
Q 019226 335 LLLQNVV 341 (344)
Q Consensus 335 ~ll~~~~ 341 (344)
.+|+.+.
T Consensus 238 ~~L~~l~ 244 (266)
T PRK10187 238 SWLEMIT 244 (266)
T ss_pred HHHHHHH
Confidence 5554443
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.17 E-value=8.5e-06 Score=86.24 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=78.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
+++||+.+.++.|++.|+++.++|+.....+..+.+.+ ++... .+.+++- ..+..+.+.++. -++ ....
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~-Gi~~~--~~~~v~g-~~l~~~~~~~l~---~~~----~~~~ 596 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL-GMPSK--TSQSVSG-EKLDAMDDQQLS---QIV----PKVA 596 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCC--CCceeEh-HHhHhCCHHHHH---HHh----hcCe
Confidence 57899999999999999999999999999999999887 66543 2223220 000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+..|+-...+.+.+....+.+.|+||+.||+.++++|++...+
T Consensus 597 Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~ 642 (884)
T TIGR01522 597 VFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM 642 (884)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec
Confidence 2355677777888887776678999999999999999999976544
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=8.1e-06 Score=84.67 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=66.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.+.+++|++.|++++++|+.+...++.+.+++ +++.+ ....
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~l-gi~~~--------------------------------~~~~ 614 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL-GIDFR--------------------------------AGLL 614 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCee--------------------------------cCCC
Confidence 68899999999999999999999999999999999987 65321 1111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..| ++ ++++++ ..++|+||||+.||..+++.|++...+
T Consensus 615 p~~K--~~----~v~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 615 PEDK--VK----AVTELN-QHAPLAMVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred HHHH--HH----HHHHHh-cCCCEEEEECCHHhHHHHHhCCeeEEe
Confidence 1112 22 444454 346899999999999999999977655
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.4e-06 Score=76.94 Aligned_cols=47 Identities=6% Similarity=-0.149 Sum_probs=39.1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEe
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITY 306 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~ 306 (344)
+-+..+-.|....+.++++ ++++++||| +.||++|.+.+|..++.|.
T Consensus 181 eI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 181 DVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred EeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3345566678899999888 599999999 8999999999888877776
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00021 Score=64.37 Aligned_cols=126 Identities=12% Similarity=0.106 Sum_probs=78.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec-c-cchhh--hhccCCcCCcccccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA-D-CQSYV--LMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~-~-~~~~~--~~~~~~~~~~~~~~~~~ 253 (344)
...-+++.++++.|+++|+++..+|.....+....++.|..++ ++..-+ + ..+++ ...+... .+..+. .
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~g----i~fs~~~~~~~~~~~~~~~~~~~--~~~~~~-~ 152 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLG----IDFSSSSFPEDGIISFPVFDSAL--SRAPSF-Y 152 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCC----CCccccccccCcceecccccCCC--CCCcee-e
Confidence 3566899999999999999999999999888777777763221 111111 0 00000 0000000 000000 0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH----HcCCeEEEEeCCCc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT----RAGMACVITYTSST 310 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~----~aG~~~v~v~~~~~ 310 (344)
.|--...+-++..++..++.++|..|+.+|||+|+..++.... ..|+...++.....
T Consensus 153 ~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 153 DGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred cCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 0000223567789999999999999999999999998776544 45888877754443
|
The function is not known. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.9e-06 Score=77.57 Aligned_cols=50 Identities=4% Similarity=-0.158 Sum_probs=38.6
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
+..+-.|...++.++ +++++++||| +.||++|.+.-|..++-|.++..+.
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~~ 237 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDTR 237 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHHH
Confidence 444555566666665 8999999999 7999999998899998887654443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.02 E-value=4.9e-05 Score=63.54 Aligned_cols=108 Identities=14% Similarity=0.138 Sum_probs=61.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHH---HHHHHhhccc-hhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI---LCLENLIGME-RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~---~~l~~l~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...|++.+++++++++|++++++|+....... ..++.+.... .+. ...++. .||.+.+. +
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp-~g~li~--------~~g~~~~~---~---- 90 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP-HGPVLL--------SPDRLFAA---L---- 90 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-CceEEE--------cCCcchhh---h----
Confidence 35689999999999999999999999877664 3343320000 111 012222 23322100 0
Q ss_pred CCCCCCCCC---CHHHHHHHHHHcCCCCCcE-EEEecCHhhHHHHHHcCCeE
Q 019226 255 GDDVKQKKP---DPSIYVTAAKRLGISEKDC-LVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 255 ~~~~~~~KP---~~~~~~~~~~~lgv~~~~~-i~vGDs~~Di~~a~~aG~~~ 302 (344)
..++...+| +.+....+.+.+.-.-... +.+||+.+|+++=+++|+..
T Consensus 91 ~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 91 HREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred hcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 112223344 3444445444443222233 34788899999999999974
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.86 E-value=7.1e-05 Score=79.62 Aligned_cols=133 Identities=17% Similarity=0.198 Sum_probs=82.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc---eeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
++.||+.+.++.|++.|++++++|+.....+..+.+.+ ++..-. .+ ..+. -..+..+.+-.+ ...+ .
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~-gi~~~~-~~v~~~~~~-g~~l~~~~~~~~----~~~~---~ 606 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRI-GIFSPD-EDVTFKSFT-GREFDEMGPAKQ----RAAC---R 606 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHc-CCCCCC-ccccceeee-HHHHhhCCHHHH----HHhh---h
Confidence 47999999999999999999999999988888888887 553211 11 1111 000000000000 0000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
.....++-.|+--..+++.++-..+.+.|+||+.||+.|.+.|++...+ .++ .......+++++.+
T Consensus 607 ~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g--~~~ak~aAD~vl~d 672 (917)
T TIGR01116 607 SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSG--TEVAKEASDMVLAD 672 (917)
T ss_pred cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCC--cHHHHHhcCeEEcc
Confidence 1112244556666777777776678888999999999999999997654 222 22223346666655
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00015 Score=70.31 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=75.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc------chhcccceeecccc--hhh---------hhcc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM------ERFEGLDCFLADCQ--SYV---------LMTN 240 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~------~~~~~~d~~~~~~~--~~~---------~~~~ 240 (344)
+...|.+..+|+.||++|.++.++||+.-..+..++..+.|- +.-.-||.+|.-+. .|- ..++
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 456789999999999999999999999999999999999776 55455788776221 110 0011
Q ss_pred CCcCCccccccccCCCCCCCCCC----CHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHc-CCeEEEEeCC
Q 019226 241 GTLMPNRVCVCAHQGDDVKQKKP----DPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRA-GMACVITYTS 308 (344)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~KP----~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~a-G~~~v~v~~~ 308 (344)
|.+.+ +..++.-++ ..--...+.+.+|....+|++|||+.. |+...+.. ||+|+.|-..
T Consensus 262 g~l~~---------~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 262 GKLKW---------GKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp SSEEC---------S---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred Ccccc---------ccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 11111 000111111 123356777888999999999999995 99988887 9999988643
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00018 Score=73.23 Aligned_cols=88 Identities=13% Similarity=0.196 Sum_probs=67.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++|++.|+++.++|+.+...+....+.+ +++. ++. .
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~l-GI~~------v~a-------------------------~-- 491 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEA-GVDD------FIA-------------------------E-- 491 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCE------EEc-------------------------C--
Confidence 57899999999999999999999999999999999887 6543 332 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.. |+-...+.+++.-..+.+.|+||+.||..+.++|+....+
T Consensus 492 --~~--PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 492 --AT--PEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred --CC--HHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 12 2323333333333345799999999999999999999765
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.002 Score=63.70 Aligned_cols=99 Identities=17% Similarity=0.136 Sum_probs=57.0
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 258 (344)
+.+++.+ .++++|.. +|+|.+.+..++...+...++ |.+++ .-+++ .+|.+- |.-.
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGi------d~VIg---TeLev~~~G~~T----------G~i~ 167 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGA------DKVLG---TELEVSKSGRAT----------GFMK 167 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCC------CEEEe---cccEECcCCEEe----------eeec
Confidence 5555544 44567754 999999999999888763254 44443 11222 133330 1111
Q ss_pred CCCCC-CHH-HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 259 KQKKP-DPS-IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 259 ~~~KP-~~~-~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+ ..+ ..+ -...+.+.+|.+... +++||+.+|..+...++-..+
T Consensus 168 g-~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~ 212 (497)
T PLN02177 168 K-PGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYM 212 (497)
T ss_pred C-CCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEE
Confidence 1 001 111 122233556655444 899999999999999998754
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00028 Score=58.71 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=61.0
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
|.+-++.++.-..++|-+++.+|+.....++.+-..| ...+.++.... ++| ..+-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~L---ak~F~i~~m~p-----------------v~f----~Gdk- 169 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTL---AKNFHITNMNP-----------------VIF----AGDK- 169 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhH---HhhcccCCCcc-----------------eee----ccCC-
Confidence 4445677888888899999999998776555544433 11111121111 111 2221
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
.||...--..+++..++ -+|.||+-+|+.+|+.+|.+.+-+.+..
T Consensus 170 -~k~~qy~Kt~~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRilRAa 214 (237)
T COG3700 170 -PKPGQYTKTQWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRAA 214 (237)
T ss_pred -CCcccccccHHHHhcCc----eEEecCCchhhhHHHhcCccceeEEecC
Confidence 13333333345555555 4899999999999999999998775543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0006 Score=70.92 Aligned_cols=69 Identities=10% Similarity=-0.035 Sum_probs=47.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC--eEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM--ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~--~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
.+-.|....+.+++ +++++.+++|||+.||..|.+.++. -+|.+... ...+.+.+++. +++.++|
T Consensus 654 ~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~------~s~A~~~l~~~-----~eV~~~L 720 (726)
T PRK14501 654 AGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG------ESRARYRLPSQ-----REVRELL 720 (726)
T ss_pred CCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCC------CCcceEeCCCH-----HHHHHHH
Confidence 34457888888888 7788999999999999999998742 23333221 13456777664 4566666
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
+.+.
T Consensus 721 ~~l~ 724 (726)
T PRK14501 721 RRLL 724 (726)
T ss_pred HHHh
Confidence 6554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00039 Score=71.16 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=69.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|+..+.+++||+.|+++.++|+.+...++.+.+++ |++++ +. +-.
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l-GId~v------~A-------------------------ell 584 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL-GIDEV------RA-------------------------ELL 584 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-ChHhh------ec-------------------------cCC
Confidence 58899999999999999999999999999999999997 76554 22 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+-.....+++.-.-+.+.||||+.||..+..+|-....+
T Consensus 585 ------PedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm 624 (713)
T COG2217 585 ------PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM 624 (713)
T ss_pred ------cHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee
Confidence 2333445555554447899999999999999999888655
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00037 Score=71.17 Aligned_cols=89 Identities=15% Similarity=0.225 Sum_probs=69.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++||+.|+++.++|+.+...+..+.+++ |++. ++. .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GId~------v~A-------------------------~-- 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDD------FLA-------------------------E-- 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcE------EEc-------------------------c--
Confidence 46899999999999999999999999999999998887 6543 332 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
. .|+-...+.+++.-.-+-+.|+||+.||..+.++|.....+-
T Consensus 491 --~--~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 491 --A--TPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred --C--CHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC
Confidence 1 234444555555444467899999999999999999987663
|
|
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00074 Score=64.60 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=71.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+|......+..|+++|+-++|+|-++...++++++.+. |.++.- .++..-..
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp--------~MiLke--------------------edfa~~~i 307 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP--------DMILKE--------------------EDFAVFQI 307 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC--------CeEeeH--------------------hhhhhhee
Confidence 33344567788999999999999999999999998872 223220 00011123
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+-|+.+.+++++++||+-.+..+|++|++...+-.++-+-
T Consensus 308 NW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 308 NWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred cCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCc
Confidence 47899999999999999999999999999998888888776
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00083 Score=68.57 Aligned_cols=89 Identities=13% Similarity=0.248 Sum_probs=70.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+.+.+++||+.|+++..+|+.+...+..+.+++ |+++ ++. .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~el-GI~~------v~A-------------------------~-- 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEA-GVDR------FVA-------------------------E-- 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCce------EEc-------------------------C--
Confidence 58899999999999999999999999999999999887 6543 222 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
. .|+-...+.+.+.-.-+.+.|+||+.||..+.++|.....+-
T Consensus 487 --~--~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 487 --C--KPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred --C--CHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 1 244445555555544467889999999999999999987653
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00011 Score=61.39 Aligned_cols=85 Identities=22% Similarity=0.310 Sum_probs=53.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+...||+.++|+.+.+. +.++|.|.+....+..+++.+..-..+ ++.++. .++
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~--~~~~~~------------------------r~~ 87 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKL--FSRRLY------------------------RDD 87 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSS--EEEEEE------------------------GGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccc--cccccc------------------------ccc
Confidence 57899999999999766 999999999999999999998321222 344444 222
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGL 292 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di 292 (344)
....+- .+.+-++.+|.+.+++++|+|++.-.
T Consensus 88 ~~~~~~---~~~KdL~~l~~~~~~vvivDD~~~~~ 119 (159)
T PF03031_consen 88 CTFDKG---SYIKDLSKLGRDLDNVVIVDDSPRKW 119 (159)
T ss_dssp SEEETT---EEE--GGGSSS-GGGEEEEES-GGGG
T ss_pred cccccc---ccccchHHHhhccccEEEEeCCHHHe
Confidence 110010 01145566677899999999999743
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00042 Score=73.44 Aligned_cols=113 Identities=12% Similarity=0.104 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+ |+.. +.+++ -..+..+++.++. -.+ ....
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~----~~v~~-G~el~~l~~~el~---~~~---~~~~- 616 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEV-GLDA----GEVLI-GSDIETLSDDELA---NLA---ERTT- 616 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCc----cCcee-HHHHHhCCHHHHH---HHH---hhCc-
Confidence 57899999999999999999999999999999999887 6642 22222 0000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.++|.++..+
T Consensus 617 VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 617 LFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred EEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe
Confidence 1133445555666666654457788999999999999999999765
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00058 Score=72.26 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=71.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+.. +.++. -..+....+.++. -.+ ....
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~l-GI~~----~~v~~-g~~l~~~~~~el~---~~~----~~~~ 581 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEV-GIDA----NDFLL-GADIEELSDEELA---REL----RKYH 581 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-CCCC----CCeee-cHhhhhCCHHHHH---HHh----hhCe
Confidence 47889999999999999999999999999999988887 6642 11222 0000000000000 000 0000
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.+.|..+..+
T Consensus 582 vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm 627 (867)
T TIGR01524 582 IFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV 627 (867)
T ss_pred EEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe
Confidence 1122344444555555544446788999999999999999999765
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0011 Score=61.69 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=64.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh--ccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI--GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++||+.++|+.|+++|++++++||+........++++. |+... .+.+++ +
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~--~~~I~t------------------------s- 96 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVT--EEEIFS------------------------S- 96 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCC--hhhEee------------------------h-
Confidence 578999999999999999999999998665555554431 33221 344443 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.......++..+....+.++|+++..+.+.++.+|+.++.
T Consensus 97 --------~~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 97 --------SFAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred --------HHHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 1244555566666545568888888999999999998764
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00062 Score=72.74 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=71.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+ ++..-. ..+++- ..+....+.++. .++ ....
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~-GI~~~~--~~vi~G-~~~~~l~~~el~---~~i----~~~~ 647 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC-GILTFG--GLAMEG-KEFRRLVYEEMD---PIL----PKLR 647 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc-CCCCCC--ceEeeH-HHhhhCCHHHHH---HHh----ccCe
Confidence 57889999999999999999999999999999998887 654211 122220 000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..|.++|-.+..+
T Consensus 648 Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred EEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec
Confidence 1123345555555555544446789999999999999999888654
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00076 Score=71.61 Aligned_cols=113 Identities=15% Similarity=0.109 Sum_probs=73.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+.+ |+.. +.+++ -..+..+.+.++. -.+ ....
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~l-GI~~----~~vi~-G~el~~~~~~el~---~~v---~~~~- 616 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREV-GLEP----GEPLL-GTEIEAMDDAALA---REV---EERT- 616 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCC----CCccc-hHhhhhCCHHHHH---HHh---hhCC-
Confidence 57899999999999999999999999999999999887 6642 12222 0000000000000 000 0001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+--..+.+.+.-.-+.+.|+||+.||..+.++|-.+..+
T Consensus 617 VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 617 VFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred EEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe
Confidence 1133355656666666655557789999999999999999998655
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0008 Score=53.84 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=26.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~ 209 (344)
.+.+++.+.|+.|+++|+.++++|+......
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 4677888999999999999999999876543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0012 Score=68.80 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=72.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh-cccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++ |+..- ...+.+..- .....+++.++. -.+ ...+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~l-GI~~~~~~~~~l~~~-~~~~~~~~~~~~---~~~---~~~~ 513 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRL-GLGTNIYTADVLLKG-DNRDDLPSGELG---EMV---EDAD 513 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCCcCHHHhcCC-cchhhCCHHHHH---HHH---HhCC
Confidence 57899999999999999999999999999999999997 66431 000001000 000000000000 000 0000
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
...+=.|+-...+.+.+.-.-+.+.|+||+.||..+.++|..+..+
T Consensus 514 -vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 514 -GFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred -EEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 1133345555566666655557799999999999999999998655
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0019 Score=58.00 Aligned_cols=104 Identities=21% Similarity=0.275 Sum_probs=67.6
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccc---------cc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV---------CV 250 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~ 250 (344)
..|.+.+.|.+|++.|.-+++=|-++++++...++.+ ++..+ ||.+++ ++. ..+-.+.+. .+
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~-~L~~~--Fd~ii~--~G~----~~~~~~~~~~~d~~~~~~f~ 213 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL-KLEGY--FDIIIC--GGN----KAGEYNSRVIVDRQYKVIFV 213 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh-CCccc--cEEEEe--CCc----cCCcCCccceeecccceEEe
Confidence 4567888999999999999999999999999999997 88877 798887 111 000011110 00
Q ss_pred cccCCCCCC--CCCC-CHHHHHHHHHHcCCCC-CcEEEEecCH-hhH
Q 019226 251 CAHQGDDVK--QKKP-DPSIYVTAAKRLGISE-KDCLVVEDSV-IGL 292 (344)
Q Consensus 251 ~~~~~~~~~--~~KP-~~~~~~~~~~~lgv~~-~~~i~vGDs~-~Di 292 (344)
..-+--++. .+-| +|+.....+++.|+.. ..+-.|+|-. ||+
T Consensus 214 ~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 214 SKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 000000111 1134 4788889999999974 4555677766 454
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0049 Score=64.88 Aligned_cols=40 Identities=10% Similarity=-0.052 Sum_probs=33.1
Q ss_pred CCCCCHHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 260 QKKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 260 ~~KP~~~~~~~~~~---~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
.+-.|....+.+++ .+|+.++.+++|||+.+|..|.+.++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 34456788888864 46899999999999999999999886
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0068 Score=50.27 Aligned_cols=104 Identities=15% Similarity=0.179 Sum_probs=60.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc-c----
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA-H---- 253 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 253 (344)
...+|+.++++.++++||++.-+|.............+..... +|.-.|.+-.+++ .
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q------------------~~~~lP~Gpv~~sP~~l~~ 88 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQ------------------QGHNLPDGPVLLSPDSLFS 88 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHh------------------CCccCCCCCEEECCcchhh
Confidence 4678999999999999999999999887655555444421111 1111122222221 0
Q ss_pred -CCCCCCCCCCCHHHHHHHH-HHc-CCC--CCcE--EEEecCHhhHHHHHHcCCeE
Q 019226 254 -QGDDVKQKKPDPSIYVTAA-KRL-GIS--EKDC--LVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 254 -~~~~~~~~KP~~~~~~~~~-~~l-gv~--~~~~--i~vGDs~~Di~~a~~aG~~~ 302 (344)
...++- .++|+.|...+ +.+ ..- ...- ..+|+...|+.+=+++|+..
T Consensus 89 al~rEvi--~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 89 ALHREVI--SKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred hhhcccc--ccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence 012332 23454554433 332 221 1222 24799999999999999973
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0061 Score=50.37 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=61.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
....++...|..+++. .+++.+|.......+..-..+ ..... .++....+ |..
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l-~~q~i-h~~~l~i~-----------------------g~h- 124 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL-FIQNI-HYDHLEIV-----------------------GLH- 124 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH-HHhcc-chhhhhhh-----------------------ccc-
Confidence 4555677888888887 678888887776555444443 32221 12333221 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCch
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.| ..+++.++++ +++.|+. |-++.|+.+|++.+.++++...
T Consensus 125 --~K------V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynR 166 (194)
T COG5663 125 --HK------VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNR 166 (194)
T ss_pred --cc------chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccc
Confidence 22 4566778776 7889998 6778888899999999988774
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0049 Score=54.09 Aligned_cols=89 Identities=19% Similarity=0.216 Sum_probs=58.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhh-HHHHHHHh--hccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VILCLENL--IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~-~~~~l~~l--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
....+.||+.++++..-++|.+|..+||.+... ....++.+ .|+.... -+.++-
T Consensus 119 ~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~-~~~~ll---------------------- 175 (274)
T COG2503 119 KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL-ESHLLL---------------------- 175 (274)
T ss_pred cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc-ccceEE----------------------
Confidence 446899999999999999999999999998776 44444443 1333321 111221
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 296 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~ 296 (344)
- ...|++..-+..+.+ ..+-++.|||+..|+-...
T Consensus 176 --k---k~~k~Ke~R~~~v~k----~~~iVm~vGDNl~DF~d~~ 210 (274)
T COG2503 176 --K---KDKKSKEVRRQAVEK----DYKIVMLVGDNLDDFGDNA 210 (274)
T ss_pred --e---eCCCcHHHHHHHHhh----ccceeeEecCchhhhcchh
Confidence 1 234566666666655 3456788999998875443
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0014 Score=54.74 Aligned_cols=79 Identities=14% Similarity=0.249 Sum_probs=58.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-hhccc-ceeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGL-DCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~-~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
+.++||+.++|+.|++. ++++|+|++....+..+++.+ +.. .+ | +.+++ .
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l-dp~~~~--F~~ri~~------------------------r 108 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI-DPDGKY--FGDRIIS------------------------R 108 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh-CcCCCe--eccEEEE------------------------e
Confidence 68999999999999966 999999999999999999997 444 33 4 44554 4
Q ss_pred CCCCCCCCCHHHHHHHH-HHcCCCCCcEEEEecCHh
Q 019226 256 DDVKQKKPDPSIYVTAA-KRLGISEKDCLVVEDSVI 290 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~-~~lgv~~~~~i~vGDs~~ 290 (344)
++.. .+ +.+-+ .-++.+.+.++.|+|++.
T Consensus 109 d~~~--~~----~~KdL~~i~~~d~~~vvivDd~~~ 138 (156)
T TIGR02250 109 DESG--SP----HTKSLLRLFPADESMVVIIDDRED 138 (156)
T ss_pred ccCC--CC----ccccHHHHcCCCcccEEEEeCCHH
Confidence 4332 11 11123 345778999999999985
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0018 Score=60.37 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=36.9
Q ss_pred CccEEEEecCccccccchh------HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh
Q 019226 66 SLQALIFDCDGVIIESEHL------HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~------~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 121 (344)
..+.|-||=|+|||+.... +...+.+.+ +.|+.+...+++.+.-...+++.+...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL-~~gv~VgIVTAAGY~~a~kY~~RL~GL 206 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLL-RRGVKVGIVTAAGYPGAEKYEERLHGL 206 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHH-hcCCeEEEEeCCCCCChHHHHHHHHHH
Confidence 8999999999999986432 333333332 457777777777777766666665443
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.002 Score=69.46 Aligned_cols=112 Identities=12% Similarity=0.101 Sum_probs=72.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc--------ceeecccchhhhhccCCcCC--c--
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL--------DCFLADCQSYVLMTNGTLMP--N-- 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~--------d~~~~~~~~~~~~~~~~~~~--~-- 246 (344)
++.|++.+.++.|++.|++++++|+.....+..+.+.+ ++..-... ..+++ +..++- .
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~-Gi~~~~~~~~~~~~~~~~vit---------G~~l~~l~~~~ 715 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEV-GIIPPNFIHDRDEIMDSMVMT---------GSQFDALSDEE 715 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCCCccccccccccccceeee---------hHHhhhcCHHH
Confidence 57899999999999999999999999999999999887 65321000 11222 000000 0
Q ss_pred c-ccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 247 R-VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 247 ~-~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
. -.+ .......+=.|+--..+.+.+.-.-+.+.|+||+.||..|.+.|..+..+
T Consensus 716 l~~~~----~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm 770 (1053)
T TIGR01523 716 VDDLK----ALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM 770 (1053)
T ss_pred HHHHh----hcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec
Confidence 0 000 00001133345555555665554457789999999999999999998765
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0025 Score=60.55 Aligned_cols=124 Identities=16% Similarity=0.225 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH------hCCCccCccHHHHHHHHHHcCCeEEEEeCCC--hhhHHHHHHHhhccchhcccc
Q 019226 155 AKLIDLIQDWKTERYQQIIK------SGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT--KSSVILCLENLIGMERFEGLD 226 (344)
Q Consensus 155 ~~~~~~l~~~~~~~~~~~~~------~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~--~~~~~~~l~~l~~~~~~~~~d 226 (344)
++....+.+.+...++++.. ...+-+.....++++.+.+.|.+|.++|.-- ....+..+... |.+-. .-
T Consensus 69 Deil~~~~q~~p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~-g~d~~--ni 145 (635)
T COG5610 69 DEILNLLQQNFPLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSF-GPDFN--NI 145 (635)
T ss_pred HHHHHHHHhhCcHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhc-CCCcc--Cc
Confidence 34445555555555555432 1123455677899999999999999999864 44556666553 43322 11
Q ss_pred eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEE
Q 019226 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVIT 305 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v 305 (344)
.++. +.+....|.+...|..+++.-++++.+.+|+||+.+ |..+++..|+.|...
T Consensus 146 piY~------------------------S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 146 PIYM------------------------SSEFRLKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred eeee------------------------cceeehhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 2344 667777899999999999999999999999999996 999999999998653
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.004 Score=66.30 Aligned_cols=119 Identities=16% Similarity=0.135 Sum_probs=77.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
+|.+++.+.++.|+++|+++..+|+.....+..+.+++ |+..-...+.+++ -..+....+.++ .-.+. .-.
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~-Gi~~~~~~~~vi~-G~el~~l~~~el----~~~~~---~~~ 617 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKEC-GIEAEAESALVID-GAELDALSDEEL----AELVE---ELS 617 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHc-CCCCCCCceeEee-hHHhhhcCHHHH----HHHhh---hCc
Confidence 68899999999999999999999999999999999887 6444210012333 000000000000 00000 001
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
..++=.|+-..++.+.+.-.-+-+.|.||+.||+.|.++|-++..+..
T Consensus 618 VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 224556666666666666556778899999999999999999976654
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0054 Score=66.06 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=71.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc-----------------------eeecccchh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-----------------------CFLADCQSY 235 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d-----------------------~~~~~~~~~ 235 (344)
++.|++.+.+++++++|+++.++|+.....+..+.+.+ ++-.-. .+ .+++
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~-gi~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~vi~----- 640 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEG-NETVEDIAARLNIPVSQVNPRDAKACVVH----- 640 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCCCC-ccchhhhhhhccccccccccccccceEEE-----
Confidence 56889999999999999999999999999999988887 442110 00 1111
Q ss_pred hhhccCCcCC--c--cccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 236 VLMTNGTLMP--N--RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 236 ~~~~~~~~~~--~--~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..++- . ..-+.. ........+-.|+-...+.+.+.-..+.+.|+||+.||+.|.+.|..+..+
T Consensus 641 ----G~~l~~l~~~el~~~~~-~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 641 ----GSDLKDMTSEQLDEILK-YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred ----hHHhhhCCHHHHHHHHH-hcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 111100 0 000000 000012234445555555555544446788999999999999999998765
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.12 Score=45.57 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+...|+++.+++|-+.-.-++|||+...-.+|+..+|+++-|......
T Consensus 215 K~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw~I~~h~Dl 262 (274)
T TIGR01658 215 KLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFVKIDLHPDS 262 (274)
T ss_pred hHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeEEeecCCCH
Confidence 468899999999997788889999999999999999999988766543
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0056 Score=56.35 Aligned_cols=116 Identities=18% Similarity=0.207 Sum_probs=74.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC---
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ--- 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 254 (344)
+.-.|....+++.|+++|.++.++||+...+++..+..+-|-+.-..||++|.- -.+ | . +|++..
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvq--------A~K--P-~-Fftde~rPf 306 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQ--------ANK--P-E-FFTDERRPF 306 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEe--------cCC--C-c-ccccccCcc
Confidence 345567889999999999999999999999999998888665544457777651 000 0 0 000000
Q ss_pred --CCC---------CCCCCCCHH----HHHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEE
Q 019226 255 --GDD---------VKQKKPDPS----IYVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVIT 305 (344)
Q Consensus 255 --~~~---------~~~~KP~~~----~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~-~aG~~~v~v 305 (344)
-++ +..-.|..- .....++--|..-.++++|||.. .|+.... .+||++-.+
T Consensus 307 R~~dek~~sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 307 RKYDEKRGSLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hhhcccccchhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 000 000001111 12334455578889999999998 5999888 899998655
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0091 Score=61.48 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=66.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.||+...+..||+.|++++.+|+.+...++.+.+++ | ++.++. +.
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V-G------i~~V~a-------------------------ev- 769 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV-G------IDNVYA-------------------------EV- 769 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh-C------cceEEe-------------------------cc-
Confidence 57899999999999999999999999999999999887 4 344543 22
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+| +--....+++.-....+.||||+.||-.+...|.++..+
T Consensus 770 ---~P--~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 770 ---LP--EQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred ---Cc--hhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee
Confidence 22 222333344444447889999999999999999887543
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0054 Score=53.06 Aligned_cols=38 Identities=16% Similarity=0.039 Sum_probs=24.4
Q ss_pred CCccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCC
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDP 102 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~ 102 (344)
.++.+|+.|+||||++....+.++ +..-+.+.|.++..
T Consensus 5 ~~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~ 44 (274)
T COG3769 5 QMPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVIL 44 (274)
T ss_pred ccceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEE
Confidence 567889999999999943222222 44445567776543
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.5 Score=44.33 Aligned_cols=44 Identities=25% Similarity=0.194 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCC
Q 019226 265 PSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 265 ~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~ 309 (344)
-..|+++.+++|- .-.-++|||+...-.+|++..|.++-++...
T Consensus 411 escFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~PfwrI~~h~ 454 (468)
T KOG3107|consen 411 ESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWRISSHS 454 (468)
T ss_pred HHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEeeccCc
Confidence 5789999999997 4455678999999999999999998776543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.085 Score=47.90 Aligned_cols=40 Identities=28% Similarity=0.302 Sum_probs=34.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
...++||+.++|+.|+++|.+++++||+.....+...+++
T Consensus 22 G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 22 GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4589999999999999999999999999887666555555
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.039 Score=54.91 Aligned_cols=85 Identities=16% Similarity=0.190 Sum_probs=63.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|++.+.++.|++.|+++.++|+.....+..+.+.+ ++ .. .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-gi---------~~-------------------------~-- 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-GI---------FA-------------------------R-- 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-Cc---------ee-------------------------c--
Confidence 68899999999999999999999999998888888876 43 11 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
=.|+....+.+++.-....+.|+||+.||..+.+.|+....+
T Consensus 390 ----~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~ 431 (499)
T TIGR01494 390 ----VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM 431 (499)
T ss_pred ----cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc
Confidence 112333344444333337799999999999999999877443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.46 Score=41.62 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=31.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
...++.||+.++++.|.+. ..-+|+|.+.++.++.....+ ++
T Consensus 80 ~sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~i-g~ 121 (315)
T COG4030 80 LSAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMI-GV 121 (315)
T ss_pred hhcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhc-CC
Confidence 3468999999999999987 555667776777777776665 44
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.027 Score=57.68 Aligned_cols=105 Identities=17% Similarity=0.264 Sum_probs=72.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc-ccc-eeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-GLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+|.+++.+.++.+++.|++|..+|+.+...+..+.+++ |+-... +++ ..++ +.+. +
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~i-Gi~~~~ed~~~~~~T---------G~ef------------D 641 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREI-GIFSEDEDVSSMALT---------GSEF------------D 641 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHh-CCCcCCccccccccc---------hhhh------------h
Confidence 68899999999999999999999999999888888887 432221 001 1111 1110 1
Q ss_pred CC-------------CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 257 DV-------------KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 257 ~~-------------~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
++ ...+-.|+-..++.+.|.-.-+=+.|-||+.||..+.+.|.++..+=
T Consensus 642 ~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG 703 (972)
T KOG0202|consen 642 DLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMG 703 (972)
T ss_pred cCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeec
Confidence 11 01223455556666666655577889999999999999999987763
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.037 Score=60.19 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=34.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
++.||+.+.++.|++.|++++++|+.....+..+....
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~ 668 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSC 668 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh
Confidence 68899999999999999999999999888888877765
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.027 Score=61.13 Aligned_cols=40 Identities=13% Similarity=0.249 Sum_probs=36.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
++.|++.+.++.|++.|+++.++|+.+...+..+.+++ |+
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~-gi 695 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAREC-GI 695 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CC
Confidence 58899999999999999999999999999999988887 55
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.13 Score=47.16 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=56.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh--hccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.++||+.++|++|+++|++++++||+.........+.+ .|+..- .+.+++
T Consensus 18 ~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~--~~~i~t-------------------------- 69 (279)
T TIGR01452 18 RVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL--AEQLFS-------------------------- 69 (279)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--hhhEec--------------------------
Confidence 58899999999999999999999997654444433333 132211 122222
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
........+++......+++++|+.. .....+.+|+..+
T Consensus 70 -------s~~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 70 -------SALCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -------HHHHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 22444455555444457799999863 3445567888754
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.2 Score=47.33 Aligned_cols=70 Identities=11% Similarity=0.054 Sum_probs=42.6
Q ss_pred CCCHHHHHHHHHHcCCCCC---cEEEEecCHhhHHHHHHc-----CCeEEEEeCCCchhhhccccccccCCccccCHHHH
Q 019226 262 KPDPSIYVTAAKRLGISEK---DCLVVEDSVIGLQAATRA-----GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333 (344)
Q Consensus 262 KP~~~~~~~~~~~lgv~~~---~~i~vGDs~~Di~~a~~a-----G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l 333 (344)
-.|....+.+++.++..-. -.+|+||...|-.|.+.. |+ .|.|..... -..+.+.+++ +.++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k----~T~A~y~L~d-----p~eV 337 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAK----ETNASYSLQE-----PDEV 337 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCC----CCcceEeCCC-----HHHH
Confidence 3567889999999886532 379999999887776654 33 244432111 1124455544 4566
Q ss_pred HHHHHHhh
Q 019226 334 ELLLQNVV 341 (344)
Q Consensus 334 ~~ll~~~~ 341 (344)
.++|+.+.
T Consensus 338 ~~~L~~L~ 345 (354)
T PLN02151 338 MEFLERLV 345 (354)
T ss_pred HHHHHHHH
Confidence 66666554
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.059 Score=58.89 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=32.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
++.+|+.+.++.|+++|++++++|+.....+..+...
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 6889999999999999999999999887766666554
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.066 Score=46.25 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=34.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
....|++.++|+.+.+. |.|+|-|.+....++.++..+
T Consensus 44 ~~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred EEeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHh
Confidence 35779999999999995 999999999999999999886
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.046 Score=48.74 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=62.4
Q ss_pred HHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCcc
Q 019226 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNR 247 (344)
Q Consensus 169 ~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~ 247 (344)
..+......+.+.+|+.++++.|.++++++.|+|.+-...++.++++...... .=.+++ |+... ++|.+.
T Consensus 80 i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~---Nv~VvS---N~M~Fd~~g~l~--- 150 (246)
T PF05822_consen 80 IEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHP---NVKVVS---NFMDFDEDGVLV--- 150 (246)
T ss_dssp HHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BT---TEEEEE---E-EEE-TTSBEE---
T ss_pred HHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCC---CeEEEe---eeEEECCcceEe---
Confidence 33444455688999999999999999999999999999999999999722211 223344 55555 244441
Q ss_pred ccccccCCCCCC-CCCCCHHHHH--HHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 248 VCVCAHQGDDVK-QKKPDPSIYV--TAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 248 ~~~~~~~~~~~~-~~KP~~~~~~--~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
..++.-+. ..|-. ..+. ...+++ -...+++..||+..|+.|+...
T Consensus 151 ----gF~~~lIH~~NKn~-~~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 151 ----GFKGPLIHTFNKNE-SALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp ----EE-SS---TT-HHH-HHHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred ----ecCCCceEEeeCCc-ccccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 00011111 11111 1111 011122 1357899999999999998766
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.13 Score=42.00 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=37.1
Q ss_pred HHHHHHHHHHcC-CCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchh
Q 019226 265 PSIYVTAAKRLG-ISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 265 ~~~~~~~~~~lg-v~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
.+.+++....-. ..+++++||||.. .|+.+|...|-.+||+..+....
T Consensus 124 ~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~ 173 (190)
T KOG2961|consen 124 AEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAE 173 (190)
T ss_pred HHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEeccccccc
Confidence 455555443223 4689999999999 59999999999999998877643
|
|
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.079 Score=49.76 Aligned_cols=96 Identities=21% Similarity=0.212 Sum_probs=61.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhh------------HHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSS------------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~------------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.+++.+..=+..|.+.||.+++.||..... ++.+.+.+ ++ .+.....
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl-~v----Pi~~~~A---------------- 162 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANL-GV----PIQLLAA---------------- 162 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhc-CC----ceEEeee----------------
Confidence 466777788888999999999999864321 12222221 11 0111111
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecC---------------HhhHHHHHHcCCeEE
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDS---------------VIGLQAATRAGMACV 303 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs---------------~~Di~~a~~aG~~~v 303 (344)
......+||..-|++...+.++ +....+++|||- ..|+..|.++|+...
T Consensus 163 --------~~~~~yRKP~tGMwe~~~~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 163 --------IIKGKYRKPSTGMWEFLKRLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred --------ccCCcccCcchhHHHHHHHHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 1223468999999999997764 334556677763 247889999998764
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.2 Score=48.90 Aligned_cols=88 Identities=14% Similarity=0.230 Sum_probs=67.4
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+.||++|-+.+||+.|++.+.+|+.++-....+..+. |+++| +.
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA-GVDdf------iA----------------------------- 491 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA-GVDDF------IA----------------------------- 491 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh-Cchhh------hh-----------------------------
Confidence 6789999999999999999999999998777777775 55554 32
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.++| +-...+.++..-.-+=+.|.||+-||..+..+|.....+.
T Consensus 492 eatP--EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 492 EATP--EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred cCCh--HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 1344 3334455555555677789999999999999998886653
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.089 Score=49.79 Aligned_cols=70 Identities=13% Similarity=-0.004 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHcCCCC---CcEEEEecCHhhHHHHHHcC----CeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 263 PDPSIYVTAAKRLGISE---KDCLVVEDSVIGLQAATRAG----MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~---~~~i~vGDs~~Di~~a~~aG----~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
.|....+.+++.++... .-.+|+||...|-.|.+.+. --+|.|..... ...+.+.+++ +.++.+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k----~T~A~y~L~d-----p~eV~~ 353 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK----DTDASYSLQD-----PSEVMD 353 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC----CCcceEeCCC-----HHHHHH
Confidence 35677788888877642 35799999998877776552 12345532111 1234555555 455556
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
+|+.+.
T Consensus 354 fL~~L~ 359 (366)
T PLN03017 354 FLARLV 359 (366)
T ss_pred HHHHHH
Confidence 665554
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.33 Score=52.33 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=30.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
++-+||.+.++.|+++|+|++++|+...+-+-.+.-.
T Consensus 651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s 687 (1151)
T KOG0206|consen 651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS 687 (1151)
T ss_pred hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh
Confidence 6788999999999999999999999776655555444
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.26 Score=45.20 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=53.3
Q ss_pred ccCccHHHHHHHHHHc----CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 179 EPRPGVLRLMDEAKAA----GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~----g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
++.||+.+.++.|.++ .++.+++||+....-....+.+ ... .++-++
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l---S~~--Lgv~Vs------------------------ 101 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL---SAL--LGVEVS------------------------ 101 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH---HHh--hCCccC------------------------
Confidence 5667777888888777 7899999998765433333333 111 222222
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.+.+.... ..|+... ...-++++++|+... -+.|+..|++-|.
T Consensus 102 ~dqviqSH---sP~r~l~---~~~~k~vLv~G~~~v-r~vAegyGFk~Vv 144 (389)
T KOG1618|consen 102 ADQVIQSH---SPFRLLV---EYHYKRVLVVGQGSV-REVAEGYGFKNVV 144 (389)
T ss_pred HHHHHhhc---ChHHHHh---hhhhceEEEecCCcH-HHHhhccCcccee
Confidence 22222111 2244444 233588999997654 5668888998764
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.48 Score=42.61 Aligned_cols=38 Identities=8% Similarity=0.092 Sum_probs=33.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++||+.++++.|+++|++++++||+.........+++
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 68999999999999999999999999887666666665
|
|
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=93.53 E-value=1.3 Score=43.63 Aligned_cols=33 Identities=9% Similarity=0.020 Sum_probs=26.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
.++..++.| +++|+|...+-+++..++...+.+
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D 133 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRAD 133 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCc
Confidence 556667788 999999999999999998843433
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.13 Score=49.03 Aligned_cols=36 Identities=8% Similarity=-0.003 Sum_probs=30.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLE 214 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~ 214 (344)
..+.+++.+.|++|.+. .+++|+|+.....++..+.
T Consensus 140 A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~ 175 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVG 175 (384)
T ss_pred ccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhC
Confidence 46778899999999888 6899999999887777764
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.19 E-value=1.5 Score=39.76 Aligned_cols=46 Identities=11% Similarity=-0.018 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC---CeEEEEeCCC
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG---MACVITYTSS 309 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG---~~~v~v~~~~ 309 (344)
+...+..+.+++....+-+++.||...|=.+..... -.+|.+..+.
T Consensus 183 KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~ 231 (266)
T COG1877 183 KGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS 231 (266)
T ss_pred hHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc
Confidence 567777788887776667899999998766666654 5556555553
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.39 Score=45.50 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=81.8
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecc--cchh-------hhh--ccCCcCCccc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAD--CQSY-------VLM--TNGTLMPNRV 248 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~--~~~~-------~~~--~~~~~~~~~~ 248 (344)
..+-...++..+++.|.++.+.||++-......+.++.+.++-.-|+.++.. +|.| -++ ..|.+
T Consensus 199 ~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l----- 273 (424)
T KOG2469|consen 199 YDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLL----- 273 (424)
T ss_pred ecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccc-----
Confidence 3445566999999999999999999999999999988663322223443331 1111 011 12222
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHH-HHcCCeEEEEeC
Q 019226 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAA-TRAGMACVITYT 307 (344)
Q Consensus 249 ~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a-~~aG~~~v~v~~ 307 (344)
..+.+++.--..+++++...+.++..+++.-.+++++||+.. |+... +.-||.++.|..
T Consensus 274 ~~g~~~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 274 KNGDNTGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred cccccCCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 222222333345677888889999999999999999999996 77655 456999887753
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.90 E-value=0.31 Score=39.27 Aligned_cols=38 Identities=21% Similarity=0.091 Sum_probs=29.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCC--ChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA--TKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~--~~~~~~~~l~~l 216 (344)
+.+.|++.+.+++|-+. |.|.|+|.. -....+...+.+
T Consensus 67 L~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl 106 (180)
T COG4502 67 LGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWL 106 (180)
T ss_pred cCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHH
Confidence 57889999999999988 999999987 444455555555
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.49 Score=42.05 Aligned_cols=107 Identities=14% Similarity=0.180 Sum_probs=65.6
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhc-cCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT-NGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 255 (344)
.+.+.+|+.++++.|+++++++.+.|.+-...++.+..+..++..+ -.+++ +|.+.. .|.+- ++.
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn---~k~vS---N~~~F~edg~l~--------gF~ 201 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPN---VKFVS---NYMDFDEDGNLC--------GFS 201 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCcc---HHhhh---hhhhhcccchhh--------hhh
Confidence 4567788999999999999999999999999999998887554442 22333 333333 22210 000
Q ss_pred CCCC--CCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 019226 256 DDVK--QKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 256 ~~~~--~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~a 298 (344)
.... ..|. -...+...+.+. -....+++.||+..|+.||..+
T Consensus 202 ~~Lihtfnkn-~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 202 QPLIHTFNKN-SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred HHHHHHHccc-hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 0000 0111 122223233332 2457889999999999998764
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=90.15 E-value=2.3 Score=37.84 Aligned_cols=38 Identities=26% Similarity=0.365 Sum_probs=31.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++|++.+.|+.++++|+++.++||+.........+.+
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 57889999999999999999999998865555555554
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.07 E-value=3.7 Score=37.60 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=33.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.||+.++++.|++.|.++.++||+.....+..++..
T Consensus 38 ~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~ 75 (306)
T KOG2882|consen 38 KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKF 75 (306)
T ss_pred CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHH
Confidence 78999999999999999999999999887666666543
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.89 E-value=1.5 Score=41.92 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=46.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEecCHhhHHHHHH-----cCCeEEEEeCCCchhhhccccccccCCccccCHHH
Q 019226 261 KKPDPSIYVTAAKRLGISEKD---CLVVEDSVIGLQAATR-----AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~---~i~vGDs~~Di~~a~~-----aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~ 332 (344)
+-.|....+.+++.+|+...+ .++|||+.+|..|.+. .|+. |.+..+.. ...+.+.+++ ..+
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vgn~~~----~t~A~y~L~d-----p~e 368 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVSSVPK----ESNAFYSLRD-----PSE 368 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEecCCC----CccceEEcCC-----HHH
Confidence 446789999999999997653 3899999999999986 3554 34432211 1123444544 456
Q ss_pred HHHHHHHhh
Q 019226 333 LELLLQNVV 341 (344)
Q Consensus 333 l~~ll~~~~ 341 (344)
+.++|+.+.
T Consensus 369 V~~~L~~L~ 377 (384)
T PLN02580 369 VMEFLKSLV 377 (384)
T ss_pred HHHHHHHHH
Confidence 666666554
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.72 E-value=1.3 Score=44.89 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=53.5
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
-..++..-|..||.++....++.+..-.++..-.+.- .++-......+++ .
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~E-f~el~~~~~aVv~----------------------------C 762 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDE-FIELVCELPAVVC----------------------------C 762 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHH-HHHHHHhcCcEEE----------------------------E
Confidence 3456777788888887766666665554444333332 1111111222322 1
Q ss_pred CCCC--CHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 260 QKKP--DPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 260 ~~KP--~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
++-| +..+-+.+-++-| .++..|||+.||+.|.+.|..+ |++...
T Consensus 763 RctPtQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gk 809 (1051)
T KOG0210|consen 763 RCTPTQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGK 809 (1051)
T ss_pred ecChhHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecc
Confidence 2333 2333333333333 7888999999999999888766 344333
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.39 E-value=2.3 Score=44.22 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc-eeecccchhhhhccCCcCCccccccccCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+..||+.+.++.++..|+.|--||+.+-..++.+..+. |+-.-. -| ..+. |.+
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eC-GILt~~-~d~~~lE------------------------G~e 700 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAREC-GILTPG-GDFLALE------------------------GKE 700 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHc-ccccCC-Cccceec------------------------chh
Confidence 57899999999999999999999999988888877775 543211 12 1222 221
Q ss_pred C------------------CCCCC-CHHHHHHHHHHcCCCCCcEEEE-ecCHhhHHHHHHcCCeEEEEe
Q 019226 258 V------------------KQKKP-DPSIYVTAAKRLGISEKDCLVV-EDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 258 ~------------------~~~KP-~~~~~~~~~~~lgv~~~~~i~v-GDs~~Di~~a~~aG~~~v~v~ 306 (344)
. .+.-| |...+-+.++ ...+++.| ||+-||-.+.+.|.....|=-
T Consensus 701 Fr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~----~~g~VVAVTGDGTNDaPALkeADVGlAMGI 765 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLI----KQGEVVAVTGDGTNDAPALKEADVGLAMGI 765 (1034)
T ss_pred hhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHH----hcCcEEEEecCCCCCchhhhhcccchhccc
Confidence 1 11222 2223333333 34566665 999999999999988876633
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=88.25 E-value=0.81 Score=41.35 Aligned_cols=37 Identities=27% Similarity=0.250 Sum_probs=30.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
.++||+.++|++|+++|++++++||+.........+.
T Consensus 21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~ 57 (257)
T TIGR01458 21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLER 57 (257)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHH
Confidence 4899999999999999999999999876653333333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences | Back alignment and domain information |
|---|
Probab=87.37 E-value=6.4 Score=34.85 Aligned_cols=97 Identities=12% Similarity=0.120 Sum_probs=60.8
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|+..++++ .|-+.|+.|.-.++.+.-.++++. .. | ...+...
T Consensus 103 ~~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~-d~-G------caavMPl----------------------- 151 (247)
T PF05690_consen 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-DA-G------CAAVMPL----------------------- 151 (247)
T ss_dssp TT--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHH-HT-T-------SEBEEB-----------------------
T ss_pred CCcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-HC-C------CCEEEec-----------------------
Confidence 467788888875 577889999999998887555433 33 2 2333331
Q ss_pred CCCC--CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCC
Q 019226 255 GDDV--KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 255 ~~~~--~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~ 309 (344)
+..+ +.+--++..++.++++.+++ +.|+-+. .|...|...|+..|++|+..
T Consensus 152 gsPIGSg~Gi~n~~~l~~i~~~~~vP----vIvDAGiG~pSdaa~AMElG~daVLvNTAi 207 (247)
T PF05690_consen 152 GSPIGSGRGIQNPYNLRIIIERADVP----VIVDAGIGTPSDAAQAMELGADAVLVNTAI 207 (247)
T ss_dssp SSSTTT---SSTHHHHHHHHHHGSSS----BEEES---SHHHHHHHHHTT-SEEEESHHH
T ss_pred ccccccCcCCCCHHHHHHHHHhcCCc----EEEeCCCCCHHHHHHHHHcCCceeehhhHH
Confidence 3222 33556789999999999875 5665553 69999999999999998654
|
ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=86.92 E-value=1.1 Score=40.20 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=29.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCCh---hhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---~~~~~~l~~l 216 (344)
.++|++.++|++|+++|++++++||+.. ......++.+
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 4678999999999999999999999653 3344444443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.04 E-value=7.5 Score=39.35 Aligned_cols=137 Identities=15% Similarity=0.196 Sum_probs=68.3
Q ss_pred ccHHHHHHHHHHcCCeEEEEeCCChhh---HHHHHHHhhccchh--cccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 182 PGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERF--EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 182 pgv~~~l~~Lk~~g~~v~ivTn~~~~~---~~~~l~~l~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
.||..|...++++||++..+|...--. .+..|..+.. +.. ..--++++ |-+. |-+- --
T Consensus 561 ~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~Q-dG~~LPdGPViLS--------------Pd~l-f~Al-~R 623 (738)
T KOG2116|consen 561 TGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQ-DGKKLPDGPVILS--------------PDSL-FAAL-HR 623 (738)
T ss_pred hhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhh-cCccCCCCCEEeC--------------CCcc-hHHH-HH
Confidence 378888889999999999999764332 3333433311 111 11111111 0000 0000 01
Q ss_pred CCCCCCCCH---HHHHHHHHHcCCCCCcEE--EEecCHhhHHHHHHcCCeE--EE-EeCCCchhhhccccccccCCcccc
Q 019226 257 DVKQKKPDP---SIYVTAAKRLGISEKDCL--VVEDSVIGLQAATRAGMAC--VI-TYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 257 ~~~~~KP~~---~~~~~~~~~lgv~~~~~i--~vGDs~~Di~~a~~aG~~~--v~-v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++-..||+. ..+..+.+.+. +-.+-. -||+..+|+..=++.|+.- |. |+..+....++.. -...
T Consensus 624 EVI~RkPe~FKIAcL~DIk~LF~-p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~-------~~~~ 695 (738)
T KOG2116|consen 624 EVIERKPEVFKIACLTDIKNLFP-PSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLK-------TLKS 695 (738)
T ss_pred HHHHcCchhhhHHHHHHHHHhcC-CCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHh-------hhhh
Confidence 233355532 22222222233 223333 3899999999999999863 33 3333332222111 0223
Q ss_pred CHHHHHHHHHHhhhc
Q 019226 329 RLKDLELLLQNVVAA 343 (344)
Q Consensus 329 ~~~~l~~ll~~~~~~ 343 (344)
+...|.++++.||++
T Consensus 696 SY~~l~elVd~mFPp 710 (738)
T KOG2116|consen 696 SYVRLNELVDHMFPP 710 (738)
T ss_pred hhhhHHHHHHHhCCC
Confidence 556777888888876
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=85.70 E-value=9.5 Score=34.32 Aligned_cols=77 Identities=13% Similarity=0.046 Sum_probs=48.1
Q ss_pred CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHH
Q 019226 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKR 274 (344)
Q Consensus 195 g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 274 (344)
-+++++||..+...-+++++-|-..+-. +|..+.. | +-||..+ ++.
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFL-----------------------g-----G~~K~~v----L~~ 231 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFL-----------------------G-----GLPKGPV----LKA 231 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHh-----------------------C-----CCchhHH----HHh
Confidence 3789999988776667777665211111 1222110 1 3333333 344
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 275 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 275 lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
++- =|||+|...-++.|. .+..++.|..+..
T Consensus 232 ~~p----hIFFDDQ~~H~~~a~-~~vps~hVP~gv~ 262 (264)
T PF06189_consen 232 FRP----HIFFDDQDGHLESAS-KVVPSGHVPYGVA 262 (264)
T ss_pred hCC----CEeecCchhhhhHhh-cCCCEEeccCCcC
Confidence 432 289999999999987 8889999887754
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >CHL00162 thiG thiamin biosynthesis protein G; Validated | Back alignment and domain information |
|---|
Probab=85.59 E-value=11 Score=33.75 Aligned_cols=98 Identities=12% Similarity=0.065 Sum_probs=69.9
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|+..++++ .|-+.|+.|.-.++.+.-.++++. .. | ...+...
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLe-d~-G------c~aVMPl----------------------- 165 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLE-DI-G------CATVMPL----------------------- 165 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-Hc-C------CeEEeec-----------------------
Confidence 467888888876 577889999999999987555433 32 2 2333221
Q ss_pred CCCC--CCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCc
Q 019226 255 GDDV--KQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 255 ~~~~--~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+... +.+-.++..++.+++...++ +.+|-+. .|+..|...|+..|+++++..
T Consensus 166 gsPIGSg~Gl~n~~~l~~i~e~~~vp----VivdAGIgt~sDa~~AmElGaDgVL~nSaIa 222 (267)
T CHL00162 166 GSPIGSGQGLQNLLNLQIIIENAKIP----VIIDAGIGTPSEASQAMELGASGVLLNTAVA 222 (267)
T ss_pred cCcccCCCCCCCHHHHHHHHHcCCCc----EEEeCCcCCHHHHHHHHHcCCCEEeecceee
Confidence 3322 34566889999999887654 6666554 699999999999999988765
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=85.42 E-value=1.9 Score=38.58 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=33.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~ 53 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKEL 53 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc
Confidence 46677899999999999999999999988888777775
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.36 E-value=2.3 Score=38.37 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+ ++
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l-~~ 59 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKEL-HM 59 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHh-CC
Confidence 45677889999999999999999999998888888876 44
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=83.57 E-value=1 Score=40.01 Aligned_cols=38 Identities=13% Similarity=-0.032 Sum_probs=25.6
Q ss_pred CHHHHHHHHHHcCCC---CCcEEEEecCHhhHHHHHHcCCe
Q 019226 264 DPSIYVTAAKRLGIS---EKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~---~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
|....+.++++++.. ++-++++||...|-.|.+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 556777777777765 77899999999999888886553
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=83.40 E-value=2.2 Score=45.64 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=31.6
Q ss_pred CccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHH
Q 019226 178 VEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~ 215 (344)
..+.|++.++|+.|.+. +..|+|+|+.+...++..+..
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 46778899999999876 678999999999887777754
|
|
| >PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional | Back alignment and domain information |
|---|
Probab=82.91 E-value=18 Score=33.77 Aligned_cols=101 Identities=14% Similarity=0.123 Sum_probs=67.3
Q ss_pred CCccCccHHHHHHHHHHc---CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~---g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
....+|+..++++..+.. |+.+.++.+.+....+.+. .+ +-.-...+-.-|
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~-~~-g~~avmPl~~pI------------------------ 229 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE-DA-GAVAVMPLGAPI------------------------ 229 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hc-CCEEEeeccccc------------------------
Confidence 346789999999888877 9999777777776555443 32 211000001111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCCc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~~ 310 (344)
|. +.+-.+|+.++.+.+...+ -+.+|-+. .|+..|...|...|+++++..
T Consensus 230 -Gs--g~gv~~p~~i~~~~e~~~v----pVivdAGIg~~sda~~AmelGadgVL~nSaIa 282 (326)
T PRK11840 230 -GS--GLGIQNPYTIRLIVEGATV----PVLVDAGVGTASDAAVAMELGCDGVLMNTAIA 282 (326)
T ss_pred -cC--CCCCCCHHHHHHHHHcCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEcceec
Confidence 22 2233489999999988543 26677664 599999999999999998765
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.25 E-value=3.9 Score=42.59 Aligned_cols=39 Identities=8% Similarity=0.185 Sum_probs=34.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.++.|+....++.|.+.+.+++.+|+.+...+.++.+.+
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v 712 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEV 712 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehhee
Confidence 468899999999999999999999999988787777776
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=81.06 E-value=3.3 Score=36.23 Aligned_cols=53 Identities=21% Similarity=0.408 Sum_probs=41.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYV 236 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~ 236 (344)
..+.|...+.|++|+++|++++++|+.....+...+..+ ++. +.+++.+|.++
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~-~~~-----~~~I~~nGa~i 66 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKEL-GID-----DYFICSNGALI 66 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHT-THC-----SEEEEGGGTEE
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccc-cch-----hhhccccccee
Confidence 357789999999999999999999999998888888875 433 34555444444
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism | Back alignment and domain information |
|---|
Probab=80.43 E-value=29 Score=31.05 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=65.5
Q ss_pred CCccCccHHHHHHHHHHc---CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 177 TVEPRPGVLRLMDEAKAA---GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~---g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
.-.++|+..++++..+.- |+.+.-+.+.+....+.+.+. + .+.+... | .-+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~--G------~~~vmPl---------g------~pI--- 155 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA--G------CAAVMPL---------G------SPI--- 155 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc--C------CCEeCCC---------C------cCC---
Confidence 346789999999888777 999995666666655544332 2 2222110 0 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC---HhhHHHHHHcCCeEEEEeCCCch
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS---VIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs---~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
|.. .+.-+++.++.+.+..++ .+++|-+ +.|+..+...|...|++++....
T Consensus 156 -Gsg--~Gi~~~~~I~~I~e~~~v----pVI~egGI~tpeda~~AmelGAdgVlV~SAIt~ 209 (248)
T cd04728 156 -GSG--QGLLNPYNLRIIIERADV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAK 209 (248)
T ss_pred -CCC--CCCCCHHHHHHHHHhCCC----cEEEeCCCCCHHHHHHHHHcCCCEEEEChHhcC
Confidence 222 234458888888776543 2555554 46999999999999999887653
|
ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH). |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=80.39 E-value=2.9 Score=37.61 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=33.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+...+.|++|+++|++++++|+.....+...++.+
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l 56 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNL 56 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhc
Confidence 46667889999999999999999999998888877775
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 344 | ||||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-09 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 4e-08 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 3e-07 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 5e-07 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 9e-07 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 6e-06 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 7e-06 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 9e-06 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 1e-05 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-05 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-05 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-05 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 3e-05 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 3e-05 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 3e-05 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 5e-05 | ||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 2e-04 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 5e-04 |
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 2e-52
Identities = 49/273 (17%), Positives = 94/273 (34%), Gaps = 55/273 (20%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++ + + A IFD DG++I+SE L +A D + V + + L +
Sbjct: 4 STPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGV----------DISRR--NELPDT 51
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+G + + P + ++++ R +++
Sbjct: 52 LGLRIDMVVDLWYAR----------QPWNGPSRQEVVE----RVIARAISLVEET-RPLL 96
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNG 241
PGV + K G V + SA+ + L + F+
Sbjct: 97 PGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD------------------ 138
Query: 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301
+ + KP P +Y+ A +LG+ C+ +EDSV G+ A+ A M
Sbjct: 139 ------ALAS---AEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189
Query: 302 CV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333
+ + + + F A L+ + KDL
Sbjct: 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAKDL 222
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 3e-49
Identities = 54/272 (19%), Positives = 105/272 (38%), Gaps = 64/272 (23%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A++FD DGVI ++ H +A+ + D +F + L G
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGV---------DRQFNEQL-----KGV 47
Query: 127 PKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT-VEPRPG 183
+ + + V+ ++ +L K + Y ++I+ + + PG
Sbjct: 48 SREDSLQKILDLA--------DKKVSAEEFKELAK----RKNDNYVKMIQDVSPADVYPG 95
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
+L+L+ + ++ K+A+ SA+ +L NL F+
Sbjct: 96 ILQLLKDLRSNKIKIALASASKNGPFLLERMNL--TGYFD-------------------- 133
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+V KP P I++ AA +G++ + + +EDS G+QA +G +
Sbjct: 134 ----AIAD---PAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI 186
Query: 304 -ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334
+ +D D I I PD S+ L+ L+
Sbjct: 187 GV-----GRPEDLGDDIVIVPDTSHYTLEFLK 213
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-48
Identities = 52/288 (18%), Positives = 102/288 (35%), Gaps = 58/288 (20%)
Query: 52 SLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD 111
++ S L+A++FD DGV+ +S H ++++ F
Sbjct: 8 AINNYLHTHGYESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGF----------GLS 57
Query: 112 PEFYDVLQNQIG-GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQ 170
E + G G + + +T + I+ + +
Sbjct: 58 REEAYMH---EGRTGASTINIVSRRERGHDATE---------------EEIKAIYQAKTE 99
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230
+ K E PG L ++ + K+ G V + + ++S++ L F G+
Sbjct: 100 EFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLN-----HNFPGIFQA-- 152
Query: 231 DCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 290
+ V DVK KP+P Y+ A K+ G + LV+E++ +
Sbjct: 153 ----------------NLMVT---AFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPL 193
Query: 291 GLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLELL 336
G+QA AG+ + T + + A ++ + + K+ E L
Sbjct: 194 GVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFN-KNWETL 240
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 1e-48
Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 58/274 (21%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GG 125
L+A++FD DGV+ S H +A++ L+ E + G G
Sbjct: 24 LKAVLFDMDGVLFNSMPYHSEAWHQVMKTHG----------LDLSREEAYMH---EGRTG 70
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ F+ +T + I+ I K+ + + E PG
Sbjct: 71 ASTINIVFQRELGKEAT------------QEEIESIYHEKSILFNSYPE---AERMPGAW 115
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
L+ + K+ G V + + + S++ LE F G+
Sbjct: 116 ELLQKVKSEGLTPMVVTGSGQLSLLERLE-----HNFPGMFHK----------------- 153
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
+ V DVK KP+P Y+ A K+ G+ + +V+E++ +G++A +AG+ +
Sbjct: 154 -ELMVT---AFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAV 209
Query: 306 YTSSTAEQDFKDAIA--IYPDLSNVRLKDLELLL 337
T Q DA A ++P + + + ++
Sbjct: 210 NTGPLDGQVLLDAGADLLFPSMQTL-CDSWDTIM 242
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 2e-48
Identities = 51/275 (18%), Positives = 98/275 (35%), Gaps = 62/275 (22%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S+ ++A+IFD DGV+ ++E + + + D I
Sbjct: 1 SNAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGI----------SIDHLPPSFF---I 47
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
GG ++ + + +Q+ Q P
Sbjct: 48 GGNTKQVWENILRDEYDKWDV---------------STLQEEYNTYKQNNPLPYKELIFP 92
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLADCQSYVLMTNG 241
VL++++E K+ G ++ + S++ K+ + LE L F
Sbjct: 93 DVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN-------RLQGFF------------- 132
Query: 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301
+ + G++ K+ KP+P IY+TA K+L + L++EDS G+ A A +
Sbjct: 133 -----DIVLS---GEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVE 184
Query: 302 CVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336
+ D A + L++V L+L+
Sbjct: 185 VWA-IRDNEFGMDQSAAKGLLDSLTDV----LDLI 214
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 8e-48
Identities = 59/279 (21%), Positives = 97/279 (34%), Gaps = 61/279 (21%)
Query: 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG 123
LQ +IFD DGVI ++ HLH QA+ + + + D +F + L G
Sbjct: 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGI----------SIDAQFNESL---KG 48
Query: 124 GGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRP 182
+ + +HG ++A+L K Y ++ P
Sbjct: 49 ISRDESLRRILQHGGKE------GDFNSQERAQLAY----RKNLLYVHSLRELTVNAVLP 98
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
G+ L+ + +A V + S + + IL E + F
Sbjct: 99 GIRSLLADLRAQQISVGLASVSLNAPTIL--------AALELREFF-------------- 136
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302
C +K KPDP I++ A LG+ + C+ +ED+ G+ A +GM
Sbjct: 137 ----TFCAD---ASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRS 189
Query: 303 V-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340
V I A + P ++ L QNV
Sbjct: 190 VGIG-------AGLTGAQLLLPSTESLTWPRLSAFWQNV 221
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-47
Identities = 61/276 (22%), Positives = 101/276 (36%), Gaps = 61/276 (22%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
SL+A+IFD DGVI ++ H A+ ++ +D + + L G
Sbjct: 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDI----------PFDRDMNERL-----KG 45
Query: 126 KPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII-KSGTVEPRP 182
+ G T+ ++ +L+ K YQ +I K + P
Sbjct: 46 ISREESLESILIFGGA------ETKYTNAEKQELMHR----KNRDYQMLISKLTPEDLLP 95
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
G+ RL+ + K K+ + S++ + IL R +D F
Sbjct: 96 GIGRLLCQLKNENIKIGLASSSRNAPKIL--------RRLAIIDDF-------------- 133
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302
V + + KPDP I++TAA L +S DC +ED+ G+ A AGM
Sbjct: 134 ----HAIVD---PTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFA 186
Query: 303 VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
V Q A + S++ L+ L +
Sbjct: 187 VGV----GQGQPMLGADLVVRQTSDLTLELLHEEWE 218
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 3e-46
Identities = 49/287 (17%), Positives = 103/287 (35%), Gaps = 64/287 (22%)
Query: 55 RKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF 114
++A Q + LIFD DG+++++E L+ + + + ++ + +
Sbjct: 18 LYFQSMAAPPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDK----------KYSWDV 67
Query: 115 YDVLQNQIGGGKPKMRW--YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI 172
++ GK + + P++ ++ + + + +++
Sbjct: 68 KSLVM-----GKKALEAAQIIIDVL--------QLPMSKEE-------LVEESQTKLKEV 107
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC 232
T PG +L+ + G A+ +++ +S + F
Sbjct: 108 FP--TAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEF-----FSLF---- 156
Query: 233 QSYVLMTNGTLMPNRVCVCAHQGDD--VKQKKPDPSIYVTAAKRLG--ISEKDCLVVEDS 288
V GDD V+ KPDP I++ AKR + + CLV ED+
Sbjct: 157 --------------SHIVL---GDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDA 199
Query: 289 VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335
G++AA AGM V+ + + A + L + + + L
Sbjct: 200 PNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGL 246
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 2e-45
Identities = 48/282 (17%), Positives = 95/282 (33%), Gaps = 61/282 (21%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S + + IFD DG + +S + + A+ +A N + +I
Sbjct: 2 SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAEN----------IPLAMWRI---HRKI 48
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
G M +TD+ + + + + Y+++ + P
Sbjct: 49 GMSGGLMLKSLSRET--------GMSITDEQ----AERLSEKHAQAYERLQHQ--IIALP 94
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
G + L++ K + ++ + + L+ L
Sbjct: 95 GAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI------------------- 135
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302
V DDV KPDP +++ AAK++G +CLV+ D++ + AA R
Sbjct: 136 -----NIVT---RDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATG 187
Query: 303 --VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342
+++ E + A+ +Y D DL L + +
Sbjct: 188 VGLLSGGYDIGELERAGALRVYEDPL-----DLLNHLDEIAS 224
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 1e-40
Identities = 58/302 (19%), Positives = 98/302 (32%), Gaps = 79/302 (26%)
Query: 43 KSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDP 102
K+N + +++ LT K L S + A +FD DG II S+ + D
Sbjct: 16 KANIQTIAMPLTTKPL-----SLKINAALFDVDGTIIISQPAIAAFWRDFGKDKP----- 65
Query: 103 SSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD--NPPVTDDDQAKLIDL 160
+ HGW + P D++ ++
Sbjct: 66 -----YFDAEHVIHIS-----------------HGWRTYDAIAKFAPDFADEE---YVNK 100
Query: 161 IQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGM 219
++ E+Y + PG ++L + A +K AV ++ T+ + L +
Sbjct: 101 LEGEIPEKYGE-----HSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KI 154
Query: 220 ERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE 279
+R E + A +DVKQ KP P Y+ LG
Sbjct: 155 KRPE------------------------YFITA---NDVKQGKPHPEPYLKGRNGLGFPI 187
Query: 280 K-------DCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLK 331
+V ED+ G+ A AG V I T K I + ++R+
Sbjct: 188 NEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG 247
Query: 332 DL 333
+
Sbjct: 248 EY 249
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 1e-37
Identities = 49/275 (17%), Positives = 85/275 (30%), Gaps = 61/275 (22%)
Query: 61 SASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN 120
S A++FD DGV++ESE + Q + + + D ++
Sbjct: 22 SMPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLH----------LDLT--EIAMY 69
Query: 121 QIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEP 180
G + Y + + D +D+++ V
Sbjct: 70 FTGQRFDGVLAYLAQQH--------DFVPPPD----FLDVLETRFNAAMTG------VTA 111
Query: 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTN 240
G + +AAG A+ S + + + L L GL +
Sbjct: 112 IEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA-------GLTELAGE--------- 155
Query: 241 GTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300
+ + + KP P +Y AA++LGI + C+V+EDSV G A AG
Sbjct: 156 ------HIYDPS---WVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGA 206
Query: 301 ACVITYTSSTAEQDFKD------AIAIYPDLSNVR 329
D A + + +R
Sbjct: 207 TLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELR 241
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 9e-36
Identities = 54/278 (19%), Positives = 88/278 (31%), Gaps = 67/278 (24%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+IFDCDGV+++SE + Q + + E + G
Sbjct: 4 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGY----------PISVEEM---GERFAGMT 50
Query: 127 PK--MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K + E P A L+D + R ++ V+ GV
Sbjct: 51 WKNILLQVESEASIP-------------LSASLLDKSEKLLDMRLER-----DVKIIDGV 92
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLADCQSYVLMTNGTL 243
+ +CS ++ + + L + GL F S
Sbjct: 93 KFALSRLTT---PRCICSNSSSHRLDMMLTKV-------GLKPYFAPHIYS--------- 133
Query: 244 MPNRVCVCAHQGDDVKQK--KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301
D+ KP P I++ A + G+S +VVEDSV G+ A AGM
Sbjct: 134 -----------AKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMR 182
Query: 302 CV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
+ T S T + R++DL ++
Sbjct: 183 VIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIA 220
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-31
Identities = 49/279 (17%), Positives = 92/279 (32%), Gaps = 45/279 (16%)
Query: 67 LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
++ALI D G I+ L A+ + F + + + + + ++ +G
Sbjct: 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEK-SEHIRRMLGNS 72
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ W ++D +L DL +T Q + PG
Sbjct: 73 RIANAWLSI----------KGQASNEEDIKRLYDLFAPIQTRIVAQ-----RSQLIPGWK 117
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
+ D+ A G KV + + L +
Sbjct: 118 EVFDKLIAQGIKVGGNTGYGPGMMAPALIAA-------KEQGYTPAS------------- 157
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACV- 303
V DV + +P P + + A L + + C+ V+D++ G++ RAGM V
Sbjct: 158 ---TVF---ATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVG 211
Query: 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342
++ + + D +D A+ D + E L N A
Sbjct: 212 VSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGA 250
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 103 bits (257), Expect = 8e-26
Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 45/279 (16%)
Query: 63 SSQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
++A+IF G ++ + + + F V +++++
Sbjct: 2 DRMKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGV--AITAEEARKP----------- 48
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+G K E +S + I + + E I+ P
Sbjct: 49 MGLLKIDHVRALTEMPRIASEWNRVFRQLPTEA--DIQEMYEEFEEILFAILPRYA-SPI 105
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNG 241
GV ++ + G K+ + T+ + + + L + D
Sbjct: 106 NGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA-------ALQGYKPDF--------- 149
Query: 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGM 300
V DDV +P P + A LG+ + V D+V ++ AGM
Sbjct: 150 -------LVTP---DDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 199
Query: 301 ACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
V + SS ++ + +++ +
Sbjct: 200 WTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFV 238
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 3e-20
Identities = 34/258 (13%), Positives = 70/258 (27%), Gaps = 66/258 (25%)
Query: 68 QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
A+IFD +I++ + R + + + + + + I
Sbjct: 26 TAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYK-----------NIDLDSIPNSTIPKYL 74
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ + L + ++ KS G +
Sbjct: 75 ITL-----------------LGKRWKEATILYE-------NSLEKSQKSDNFMLNDGAIE 110
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
L+D K +A+ S + + + F+
Sbjct: 111 LLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----------------------- 147
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV-I 304
+ D KP P + A + I K+ + DS+ +Q+A AG +
Sbjct: 148 -SIIG---SGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKY 203
Query: 305 TYTSSTAE-QDFKDAIAI 321
T+ + FK+ I
Sbjct: 204 GSTNIIKDILSFKNFYDI 221
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 81.8 bits (203), Expect = 1e-18
Identities = 33/238 (13%), Positives = 72/238 (30%), Gaps = 70/238 (29%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
I+D G ++++ A+ + + + + + +D + + P
Sbjct: 7 HDYIWDLGGTLLDNYETSTAAFVETLALYGI-------------TQDHDSVYQALKVSTP 53
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR--PGVL 185
E P+ F E+Y++ P GV
Sbjct: 54 FA----IETFAPNLENF---------------------LEKYKENEARELEHPILFEGVS 88
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
L+++ G + + S ++ +L + +E+ F
Sbjct: 89 DLLEDISNQGGRHFLVS--HRNDQVLEI-----LEKTSIAAYF----------------- 124
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
V ++KP+P + ++ IS LV+ D I ++A AG+
Sbjct: 125 -TEVVT---SSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTH 176
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 5e-18
Identities = 33/282 (11%), Positives = 86/282 (30%), Gaps = 61/282 (21%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
++FD DG +++ E ++R+ DA +D G +
Sbjct: 6 LVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS---------TGSHDFSGKMDGAIIYE 56
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ G + A D ++ +++ + + GV L+
Sbjct: 57 V---LSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELL 102
Query: 189 DEAKAAGK-KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
D + + + + ++S L+ G+D +
Sbjct: 103 DALSSRSDVLLGLLTGNFEASGRHKLKLP-------GIDHYFPFGAF------------- 142
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGMACV- 303
DD + P I + A+R+ S +++ D+ ++ A +
Sbjct: 143 -------ADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIA 195
Query: 304 ITYTSSTAEQ-DFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 344
+ + T E+ ++ + + + + +L +++
Sbjct: 196 VATGNFTMEELARHKPGTLFKNFA-----ETDEVLASILTPK 232
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 7e-18
Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 33/166 (19%)
Query: 160 LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219
LI D+ + GT E + L+ AK G + S + L
Sbjct: 5 LIVDYAG------VLDGTDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58
Query: 220 ERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE 279
+ + + + ++ +KP+ + + AA + +
Sbjct: 59 GVVDKV------------------------LLS---GELGVEKPEEAAFQAAADAIDLPM 91
Query: 280 KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 325
+DC++V+DS++ ++ A AG+ V A + + +
Sbjct: 92 RDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVVEIVGLFGLEGEF 137
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 78.3 bits (194), Expect = 3e-17
Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 61/238 (25%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+ QAL+FD DG + S+ + + + +
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMREVLAT------------YGKPFSPAQAQKTFPMAA 50
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ M E G + + +D Y Q +E PG+
Sbjct: 51 EQAMT----ELG-----------IAASEFDHFQAQYEDVMASHYDQ------IELYPGIT 89
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
L ++ + ++ + ++ ++ + + + M R
Sbjct: 90 SLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMA---------------------- 126
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
V + DD ++KPDP +TA +++ ++ ++ L + DSV Q A A +
Sbjct: 127 --VTIS---ADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 179
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 1e-16
Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 64/246 (26%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQN 120
+++ +FD D + +S + D+++
Sbjct: 1 SNAMKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGY-------------TGITDDMIKR 47
Query: 121 QIGGGKPK-MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVE 179
IG + D +L Q++ + + + T+
Sbjct: 48 TIGKTLEESFSILTGI----------------TDADQLESFRQEYS-KEADIYMNANTI- 89
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLADCQSYVL 237
P L + K G ++ + S TK ++ L N + + F+
Sbjct: 90 LFPDTLPTLTHLKKQGIRIGIIS--TKYRFRILSFLRNHMPDDWFD-------------- 133
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR 297
+ + G+DV KPDP + A RL ++ L + DS + A
Sbjct: 134 ----------IIIG---GEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180
Query: 298 AGMACV 303
AG++
Sbjct: 181 AGVSFT 186
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 1e-16
Identities = 21/182 (11%), Positives = 39/182 (21%), Gaps = 34/182 (18%)
Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
L+ + PG + + G A ++ +
Sbjct: 16 CLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPVN- 74
Query: 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS 278
D +A P P A L +S
Sbjct: 75 -------DWMIA------------------------APRPTAGWPQPDACWMALMALNVS 103
Query: 279 -EKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336
+ C+++ LQ+ AG+ + + A+ R L
Sbjct: 104 QLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLK 163
Query: 337 LQ 338
L
Sbjct: 164 LY 165
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 5e-15
Identities = 45/282 (15%), Positives = 80/282 (28%), Gaps = 78/282 (27%)
Query: 27 SSLTHNPIFHTNALRFKSNKKPLSLSLTRKALRVSASSQSLQALIFDCDGVIIES-EHLH 85
S H+ H L F+ + + + FD DG ++ S L
Sbjct: 3 SDKIHH-HHHHENLYFQGMTQF-------------------KLIGFDLDGTLVNSLPDLA 42
Query: 86 RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145
+ N A N +++ IG G + + +
Sbjct: 43 L-SINSALKDVN------------LPQASENLVMTWIGNGADVL----SQRAVDWACKQA 85
Query: 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS--- 202
+T+D+ + Y + + + + P V ++ KA G +AV +
Sbjct: 86 EKELTEDEFKYFKRQFGFY----YGENLCNISR-LYPNVKETLEALKAQGYILAVVTNKP 140
Query: 203 -AATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK 261
+ L F + G + +
Sbjct: 141 TKHVQ----PILTAFGIDHLFS------------------------EMLG---GQSLPEI 169
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
KP P+ + + G+ K L V DS + AA AG A V
Sbjct: 170 KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVV 211
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 8e-15
Identities = 50/249 (20%), Positives = 83/249 (33%), Gaps = 60/249 (24%)
Query: 68 QALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEF-YDVLQNQIGGG 125
+A IFD DG I+++ L A N AF R +F + ++N G G
Sbjct: 5 KAAIFDMDGTILDTSADLTS-ALNYAFEQTGHR------------HDFTVEDIKNFFGSG 51
Query: 126 KPKM-------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
+ D Q ++ +++ +K Y + T
Sbjct: 52 VVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFK-PYYADHCQIKTG 110
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCS----AATKSSVILCLENLIGMERFEGLDCFLADCQS 234
P PG+L LM + G K+AV S A + + +E L F+
Sbjct: 111 -PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQ----VLVEELFP-GSFD----------- 153
Query: 235 YVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA 294
+ ++KP P + K LG+ C+ + DS I +Q
Sbjct: 154 -------------FALG---EKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQT 197
Query: 295 ATRAGMACV 303
A + M +
Sbjct: 198 ARNSEMDEI 206
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 71.1 bits (175), Expect = 9e-15
Identities = 28/259 (10%), Positives = 76/259 (29%), Gaps = 63/259 (24%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
A I+D DG +++S + F+ F+ + +D E V +
Sbjct: 5 TAFIWDLDGTLLDSYEAILSGIEETFAQFS----------IPYDKE--KVREFIFKYSVQ 52
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ +D+ ++++ + + + V PG +
Sbjct: 53 DL---LVRVA--------------EDRNLDVEVLNQVR-AQSLAEKNAQVV-LMPGAREV 93
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ A +G + + + K + + ++ F + +
Sbjct: 94 LAWADESGIQQFIYT--HKGNNAFTI-----LKDLGVESYF-----TEI----------- 130
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 306
+ +KP P + ++ + + D + ++ A +G+ +
Sbjct: 131 --LT---SQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE 185
Query: 307 TSSTAE---QDFKDAIAIY 322
++ Q D I+
Sbjct: 186 STYEGNHRIQALADISRIF 204
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 1e-13
Identities = 26/236 (11%), Positives = 65/236 (27%), Gaps = 57/236 (24%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
++FD DG + +S ++ + + F+++ + L +G
Sbjct: 5 NYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVED------------LSSLNKFVGPPLK 52
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
F E+ ++ ID + + ++ + G+ L
Sbjct: 53 TS---FMEY----------YNFDEETATVAIDYYR----DYFKAKGMFEN-KVYDGIEAL 94
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ K G + V ++ LE+ F+ +
Sbjct: 95 LSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVG-------------------- 134
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+ + A + L I D +++ D + A + + +
Sbjct: 135 -------SSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSI 183
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 3e-13
Identities = 51/324 (15%), Positives = 101/324 (31%), Gaps = 58/324 (17%)
Query: 34 IFHTNALRFKSNKKPLSLSLTRKALRVSASSQ-SLQALIFDCDGVIIESEHLHRQAYNDA 92
+ H F +P+ L L + ++ + Q + D V + +++ A
Sbjct: 96 LSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFA 155
Query: 93 FSHFNV-RCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTD 151
+ +V S + W +V Q WY
Sbjct: 156 TTELHVSDATLFSLKGALWTLA-QEVYQE----------WYL-----------------G 187
Query: 152 DDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211
+ ++ T + I + + P V L+++ K AG ++ + + + ++
Sbjct: 188 SKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTA 271
ENL + FE A P KP+P Y+ A
Sbjct: 248 PFENLGLLPYFEADFIATASDVLEAENMYPQARP--------------LGKPNPFSYIAA 293
Query: 272 AKR--------------LGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 317
+++ D +V DS+ L +A + G + T T + +
Sbjct: 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGE 353
Query: 318 AIAIYPDLSNVRLKDLELLLQNVV 341
A + D L +L +L N++
Sbjct: 354 LEAHHADYVINHLGELRGVLDNLL 377
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 3e-13
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 27/137 (19%)
Query: 167 ERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226
+++ + G+ P PG + L+ E G ++ + + + + LE + GL
Sbjct: 59 LEHERDLAQGSR-PAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI-------GLA 110
Query: 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVE 286
A+ V G D KP P + A+ +S ++V
Sbjct: 111 DCFAEA--------------DVL-----GRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVG 151
Query: 287 DSVIGLQAATRAGMACV 303
D L AG V
Sbjct: 152 DYRFDLDCGRAAGTRTV 168
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 4e-13
Identities = 46/241 (19%), Positives = 81/241 (33%), Gaps = 65/241 (26%)
Query: 66 SLQALIFDCDGVIIES-EHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
SL+ ++FD DG +I+S + + A + + D + IGG
Sbjct: 2 SLRVILFDLDGTLIDSAKDIAL-ALEKTLKELG------------LEEYYPDNVTKYIGG 48
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
G + E D + + +++ + Y + T P P +
Sbjct: 49 GVRAL----LEKVLK-----------DKFREEYVEVFRKH----YLENPVVYTK-PYPEI 88
Query: 185 LRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
++ K+ G K+AV S K L+ L F+
Sbjct: 89 PYTLEALKSKGFKLAVVS--NKLEELSKKILDILNLSGYFD------------------- 127
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302
+ V GD +KKP P+ + + LG + L+V D+ ++A RAG
Sbjct: 128 -----LIVG---GDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKT 179
Query: 303 V 303
Sbjct: 180 A 180
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 7e-13
Identities = 31/256 (12%), Positives = 77/256 (30%), Gaps = 59/256 (23%)
Query: 49 LSLSLTRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSL 108
+ L + +A ++ + ++FD DG + + + ++ + + F +
Sbjct: 11 VDLGTENLYFQSNAMKKNYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGI---------- 60
Query: 109 NWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTER 168
E + L IG FKE+ D + ++ + E
Sbjct: 61 ---KEDLENLDQFIGPPLHDT---FKEYY----------KFEDKKAKEAVEKYR----EY 100
Query: 169 YQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCF 228
+ + + +++ GK + V + +K +V + F+ F
Sbjct: 101 FADKGIFEN-KIYENMKEILEMLYKNGKILLVAT--SKPTVFA----ETILRYFDIDRYF 153
Query: 229 LADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVED 287
Y+ G + + + + +KD ++V D
Sbjct: 154 -----KYIA---G-------------SNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD 192
Query: 288 SVIGLQAATRAGMACV 303
+ A + G+ +
Sbjct: 193 RKYDIIGAKKIGIDSI 208
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 2e-12
Identities = 35/237 (14%), Positives = 69/237 (29%), Gaps = 52/237 (21%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A++ D ++ + + + D + + +
Sbjct: 4 KAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLR---------KVFRAYAKAM----- 49
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
M Y E G ++ D I + E + I+ G L
Sbjct: 50 GMINYPDEDGL------EHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEF 103
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
++ K+ G K+A+ S A+ V LE L + + L
Sbjct: 104 LEGLKSNGYKLALVSNAS-PRVKTLLEKF-------DLKKYF---DALAL---------- 142
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 303
++K KP+P I+ A ++G + V D A R+ + +
Sbjct: 143 -------SYEIKAVKPNPKIFGFALAKVGY---PAVHVGDIYELDYIGAKRSYVDPI 189
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 3e-12
Identities = 35/249 (14%), Positives = 73/249 (29%), Gaps = 58/249 (23%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
AL +D GV++ + R+ D F + D +++ PE G+
Sbjct: 6 ALFWDIGGVLLTN-GWDREQRADVAQRFGLDTDDFTERHRLAAPELEL--------GRMT 56
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ Y ++ + P + D +PRP VL L
Sbjct: 57 LAEYLEQ-------VVFYQPRDFTPE----DFRAVM----------EEQSQPRPEVLALA 95
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
+ ++ + + + E S
Sbjct: 96 RDLGQ-RYRMYSLNNEGRDLNEYRIRTFGLGEFLLAF------FTSS------------- 135
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308
+ KP+P++Y + ++ ++V+D + +QAA GM V +
Sbjct: 136 --------ALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187
Query: 309 STAEQDFKD 317
+ ++
Sbjct: 188 AQLREELAA 196
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 5e-12
Identities = 32/276 (11%), Positives = 75/276 (27%), Gaps = 49/276 (17%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
+ ++ + FD +++ + + + + + ++N+I
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVA--------NAVIEVRNEI-- 51
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
+ + + + KL ++ K + I+ G
Sbjct: 52 -----KKMRAQASEDPRKVLTG--SQEALAGKLKVDVELVKRATARAILNVDESLVLEGT 104
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM 244
+ K G K AV L ERF ++
Sbjct: 105 KEALQFVKERGLKTAVIGNVMFWPGSYTRLLL---ERFGLMEFI-----DKTFF------ 150
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACV 303
D+V KP ++ + ++ L + D+ Q A + GM V
Sbjct: 151 ----------ADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAV 200
Query: 304 -ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
I + + I + +L+ +++
Sbjct: 201 WINQEGDKVRKLEERGFEIP------SIANLKDVIE 230
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 8e-12
Identities = 31/257 (12%), Positives = 69/257 (26%), Gaps = 42/257 (16%)
Query: 60 VSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-----CDPSSQQSLNWDPEF 114
V + + ++ D +G + + + + QQ ++ +
Sbjct: 3 VLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQ 62
Query: 115 YDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD-----NPPVTDDDQAKLIDLIQD--WKTE 167
+ + G P I ++ D + + +Q W+
Sbjct: 63 AEE-DAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWR-A 120
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
+ V+ + + + AG KV + S+ + + L + + E +D
Sbjct: 121 AFTAGRMKAEF--FADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDG 178
Query: 228 FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED 287
D K + Y A +G S + L + D
Sbjct: 179 HF--------------------------DTKIGHKVESESYRKIADSIGCSTNNILFLTD 212
Query: 288 SVIGLQAATRAGMACVI 304
AA A + +
Sbjct: 213 VTREASAAEEADVHVAV 229
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 1e-11
Identities = 43/266 (16%), Positives = 78/266 (29%), Gaps = 56/266 (21%)
Query: 54 TRKALRVSASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPE 113
T S S+ ++ L+ D GV+I N D E
Sbjct: 15 TENLYFQSMKSKGIKNLLIDLGGVLI-----------------------------NLDRE 45
Query: 114 FYDVLQNQIGGGKPKMRWYFKEHGWPSSTI-FDNPPVTDDDQAKLI--DLIQDWKTERYQ 170
++N G + F H + + +T + I + + ++
Sbjct: 46 --RCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSDKQID 103
Query: 171 QIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230
S V+ L L+ + + V + S +N F+ D F
Sbjct: 104 AAWNSFLVDIPTYKLDLLLKLREKYV-VYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEK 162
Query: 231 DCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI 290
SY ++K KP+P I+ + GI K+ ++DS I
Sbjct: 163 TYLSY---------------------EMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEI 201
Query: 291 GLQAATRAGMACVITYTSSTAEQDFK 316
+ A G++ F+
Sbjct: 202 NCKVAQELGISTYTPKAGEDWSHLFR 227
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 2e-11
Identities = 28/239 (11%), Positives = 69/239 (28%), Gaps = 62/239 (25%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
S+ A+ FD DG +++S A+ F V P ++ + +G
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP-SPDAKTIRGF-----------MGP 49
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
F ++ D ++ + + + Y+ + P +
Sbjct: 50 PLESS---FATC------------LSKDQISEAVQIYR----SYYKAKGIYEA-QLFPQI 89
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM 244
+ L++E + + + + TK + + E F
Sbjct: 90 IDLLEELSS-SYPLYITT--TKDTSTA----QDMAKNLEIHHFF---------------- 126
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
+ K D A + ++ + +++ D+ + A G+ +
Sbjct: 127 --DGIYGS---SPEAPHKADVIHQ--ALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 61.7 bits (150), Expect = 4e-11
Identities = 44/290 (15%), Positives = 81/290 (27%), Gaps = 60/290 (20%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++ L +D ++ H +AY + +PS+ + F +
Sbjct: 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQ-----GFRQAYR-AQSHSF 54
Query: 127 PKMRWYFKEHGWPS--------STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTV 178
P Y HG S F V D + + + Y+ T
Sbjct: 55 PN---YGLSHGLTSRQWWLDVVLQTFHLAGVQDAQ--AVAPIAEQL----YKDFSHPCTW 105
Query: 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM 238
+ G + E + G ++AV S + L L GL
Sbjct: 106 QVLDGAEDTLRECRTRGLRLAVISNFD-RRLEGILGGL-------GLREHF--------- 148
Query: 239 TNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQA 294
+ + + KPDP I+ A + + V D+ G
Sbjct: 149 --------DFVLTS---EAAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQG--- 194
Query: 295 ATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAAS 344
GM + + +D++ L + L L L + ++
Sbjct: 195 PRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALDCLEGSA 242
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 8e-11
Identities = 32/272 (11%), Positives = 73/272 (26%), Gaps = 82/272 (30%)
Query: 62 ASSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ 121
A ++ IFD VI+ + D
Sbjct: 2 ARKEAKMLYIFDLGNVIV-----------------------------DIDFNRV------ 26
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDD---------DQAKLIDLIQ-----DWKTE 167
+ + P +++ + + + + + E
Sbjct: 27 -------LGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYE 79
Query: 168 RYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDC 227
++ ++ V RP V+ +M + + G +V V S N
Sbjct: 80 QFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLS------------N-TNRLHTTFWPE 126
Query: 228 FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED 287
+ + + D+ +KP+ IY + G S D + +D
Sbjct: 127 EYPEIRDAA----------DHIYLSQ---DLGMRKPEARIYQHVLQAEGFSPSDTVFFDD 173
Query: 288 SVIGLQAATRAGMACVITYTSSTAEQDFKDAI 319
+ ++ A + G+ ++ +T F +
Sbjct: 174 NADNIEGANQLGITSILVKDKTTIPDYFAKVL 205
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 9e-11
Identities = 44/270 (16%), Positives = 81/270 (30%), Gaps = 51/270 (18%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
FD D + +S + F Q L PE VL
Sbjct: 59 VFFFDIDNCLYKSSTRIHDLMQQSILRF-------FQTHLKLSPEDAHVLN--------- 102
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
Y+KE+G + L + Q I+K P +L +
Sbjct: 103 -NSYYKEYGLAIRGLVMF-----HKVNALEYNRLVDDSLPLQDILKP--DIPLRNMLLRL 154
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
++ K + + A K+ I CL L + F+G +
Sbjct: 155 RQSGKIDKLW-LFTNAYKNHAIRCLRLLGIADLFDG-----------------------L 190
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACVITYT 307
C + D KP + A K G++ ++ ++DS ++ + GM I
Sbjct: 191 TYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLV 250
Query: 308 SSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337
+ + +S+ + +L ++
Sbjct: 251 ENEVNEILGQTPEGAIVISD--ILELPHVV 278
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-09
Identities = 24/268 (8%), Positives = 63/268 (23%), Gaps = 72/268 (26%)
Query: 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI 122
S+ ++ ++FD GV+I + + E + ++
Sbjct: 1 SNAMIRNIVFDLGGVLI-----------------------------HLNRE--ESIRRFK 29
Query: 123 GGGKPKMRWYFKEHGWPSSTIFDNPPVTDDD-----QAKLIDLIQ-----DWKTERYQQI 172
G + D + + + + + ++
Sbjct: 30 AIGVADIEEMLDP-------YLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDA 82
Query: 173 IKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC 232
+ E +D ++ + S + L + F
Sbjct: 83 LLGFLEEISAEKFDYIDS-LRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVY 141
Query: 233 QSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGL 292
S + + KP+ I++ G+ ++ L ++D +
Sbjct: 142 ASC---------------------QMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANV 180
Query: 293 QAATRAGMACVITYTSS-TAEQDFKDAI 319
A R G + +
Sbjct: 181 ATAERLGFH-TYCPDNGENWIPAITRLL 207
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 2e-09
Identities = 43/279 (15%), Positives = 85/279 (30%), Gaps = 62/279 (22%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD D ++++ L A +A + P + Y L
Sbjct: 3 KVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFE------TAYSELIE------- 49
Query: 128 KMRWYFKEHGWPSSTIFD------NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
KE+G FD + P + + + + ++ +
Sbjct: 50 ----LIKEYGSNFPYHFDYLLRRLDLPY---NPKWISAGVIAYHNTKFAYL------REV 96
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNG 241
PG +++ K G ++ + + + L ++ F F
Sbjct: 97 PGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-ELDDF-----F------------- 137
Query: 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGM 300
+ + D KKP P I+ A K + ++ L+V D + + A R GM
Sbjct: 138 -----EHVIIS---DFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGM 189
Query: 301 ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339
V + + + Y D L+ L +L
Sbjct: 190 KTV--WFRYGKHSERELEYRKYADYEIDNLESLLEVLAR 226
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 2e-07
Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 37/189 (19%)
Query: 159 DLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIG 218
+ Y +++ R +++ K G K A+ S S + L
Sbjct: 20 TRYDHHPLDTYPEVV------LRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-- 71
Query: 219 MERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS 278
F +D F + + + K +KPD +I+ L I
Sbjct: 72 -TNFGIIDYF-----------------DFIYASNSELQPGKMEKPDKTIFDFTLNALQID 113
Query: 279 EKDCLVVEDS----VIGLQAATRAGMACV----ITYTSSTAEQDFKDAIAIYPDLSNVRL 330
+ + ++V ++ +IG A RAG+ + + P +
Sbjct: 114 KTEAVMVGNTFESDIIG---ANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADV 170
Query: 331 KDLELLLQN 339
+ LLL+
Sbjct: 171 PEALLLLKK 179
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 4e-07
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYTSSTAEQD 314
DD+K KPDP IY A RLG++ + V + L A + G V I + E +
Sbjct: 155 DDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYE 214
Query: 315 FKDAIAIYPDLSNVRLKDLELLLQNVVAAS 344
F LS + LL +NV A+
Sbjct: 215 FAPLKHQVNSLSEL----WPLLAKNVTKAA 240
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 8e-07
Identities = 39/281 (13%), Positives = 88/281 (31%), Gaps = 55/281 (19%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQ---NQIGG 124
+A+ FD D +I++ R+ + + + + D + + +
Sbjct: 19 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 78
Query: 125 GKPKMRWY-FKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
+R ++E D++ + WK+ R Q +
Sbjct: 79 CITDVRTSHWEE-------AIQETKGGADNRKLAEECYFLWKSTRLQHM------ILADD 125
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
V ++ E + ++ + + + + +E F+ +
Sbjct: 126 VKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAI------------------ 166
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAG 299
V + K++KP PSI+ LG+ DC++V D+ + G AG
Sbjct: 167 ------VIG---GEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQG---GLNAG 214
Query: 300 MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340
+ + + P + +L LLQ++
Sbjct: 215 LKATVWINK---SGRVPLTSSPMPHYMVSSVLELPALLQSI 252
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 47.2 bits (112), Expect = 2e-06
Identities = 25/127 (19%), Positives = 38/127 (29%), Gaps = 27/127 (21%)
Query: 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYV 236
+ P V + E K G K+A+ S + S+ + + GL S
Sbjct: 93 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-------GLRDGFDHLLS-- 143
Query: 237 LMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT 296
D V+ KPD +Y A + LG+ L V + A
Sbjct: 144 ------------------VDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 185
Query: 297 RAGMACV 303
G
Sbjct: 186 YFGFPTC 192
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 45.9 bits (108), Expect = 5e-06
Identities = 39/278 (14%), Positives = 72/278 (25%), Gaps = 65/278 (23%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
+FDCD +++++H+ F + E ++ L+ ++G
Sbjct: 14 FLFDCDNTLLDNDHVLADLRAHMMREFGAQNSAR-------YWEIFETLRTELGYADYLG 66
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
P T D + PG L +
Sbjct: 67 ALQRYRLEQPRDTRLLLMSSFLIDYPFASRVY--------------------PGALNALR 106
Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249
A G + S + + EG RV
Sbjct: 107 HLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEG----------------------RVL 143
Query: 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309
+ H K+ D + A+ ++V+D + L A +A A + T
Sbjct: 144 IYIH-----KELMLDQVMECYPARH-------YVMVDDKLRILAAMKKAWGARLTTVFPR 191
Query: 310 TAEQDFKDAIAIY---PDLSNVRLKDLELLLQNVVAAS 344
F D++ R+ DL + + A
Sbjct: 192 QGHYAFDPKEISSHPPADVTVERIGDLVEMDAEWLLAE 229
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 9e-06
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303
D + KP P Y + LG++ + L V + + A G +
Sbjct: 141 DAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 1e-05
Identities = 30/246 (12%), Positives = 72/246 (29%), Gaps = 57/246 (23%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSS-QQSLNW-----DPEFYDVLQNQ 121
+ L FD D I R + + + ++ S + + + +
Sbjct: 6 KNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGK 65
Query: 122 IGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPR 181
+ K ++ + V D+ A+ +D+ +
Sbjct: 66 VT--KEELNRQRFFY------PLQAVGVEDEALAE--RFSEDFFAIIPTK------SGLM 109
Query: 182 PGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNG 241
P +++ + + S + + + G++R+ F ++++
Sbjct: 110 PHAKEVLEYLAP-QYNLYILSNGFRELQSRKMRSA-GVDRY-----F-----KKIILS-- 155
Query: 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQAATR 297
+D+ KP P I+ A ++ L++ DS + G A
Sbjct: 156 --------------EDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITG---AHG 198
Query: 298 AGMACV 303
GM
Sbjct: 199 VGMHQA 204
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
Query: 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS----VIGLQAATRAGMACV 303
++ KP P I+ A K+ G+ ++ + V D+ G + GM +
Sbjct: 149 EEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGG---SKNLGMTSI 197
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 2e-05
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAI 321
KP+P IY L S + + ++D L+ A GM ++ + TA ++ + I
Sbjct: 160 KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKELEKVTGI 219
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 43.2 bits (101), Expect = 5e-05
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304
KK + Y + +G + L + D+ + L AA G+A +
Sbjct: 186 KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGL 229
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 6e-05
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304
P+ C C +KP P +Y A+R + V DS+ LQAA +AG A +
Sbjct: 93 PDDGCAC---------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWL 143
Query: 305 TYT----SSTAEQDFKDAIAIYPDLS 326
T + A+ + + DL+
Sbjct: 144 VQTGNGRKTLAQGGLPEGTRVCEDLA 169
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 6e-05
Identities = 13/84 (15%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP+ + ++ A + + ++ +++ D + A GM ++ T D +
Sbjct: 179 KPEKTFFLEALRDADCAPEEAVMIGDDCRDDVD--GAQNIGMLGILVKTGKYKAADEEKI 236
Query: 319 IAIYPDLSNVRLKDL-ELLLQNVV 341
P L+ + +LQ+++
Sbjct: 237 -NPPPYLTCESFPHAVDHILQHLL 259
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 8e-05
Identities = 52/379 (13%), Positives = 111/379 (29%), Gaps = 125/379 (32%)
Query: 6 ILSQTATLSSSSSSTTTTAKFSSLTHNPIFHTNALRFKSN--KKPLSLSLTRKALRVSAS 63
++S T S T + + +++ N + K N + L L R+AL
Sbjct: 94 LMSPIKTEQRQPSMMTR--MYIE-QRDRLYNDNQVFAKYNVSRLQPYLKL-RQAL----- 144
Query: 64 SQSLQALIFDCDGVIIESEH---------LHRQAYND-----AFSHFNV------RCD-P 102
L+ V+I + F + C+ P
Sbjct: 145 -LELR----PAKNVLI---DGVLGSGKTWVALDVCLSYKVQCKMD-FKIFWLNLKNCNSP 195
Query: 103 SS----QQSL------NWD--PEFYDVLQNQIGGGKPKMRWYFKEHGWPSS-TIFDNPPV 149
+ Q L NW + ++ +I + ++R K + + + N V
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN--V 253
Query: 150 TDDDQAKLID-----LIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAA 204
+ + L+ T R++Q+ SAA
Sbjct: 254 QNAKAWNAFNLSCKILL----TTRFKQVT-------------------------DFLSAA 284
Query: 205 TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC-----VCAHQGDDVK 259
T + + L + + + E L Y+ L P V + + ++
Sbjct: 285 TTTHISL-DHHSMTLTPDEVKSLLL----KYLDCRPQDL-PREVLTTNPRRLSIIAESIR 338
Query: 260 QKK--PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKD 317
D +V K ++ ++E S+ L+ + + F
Sbjct: 339 DGLATWDNWKHVNCDK---LTT----IIESSLNVLE--------------PAEYRKMFDR 377
Query: 318 AIAIYPDLSNVRLKDLELL 336
++++P +++ L L+
Sbjct: 378 -LSVFPPSAHIPTILLSLI 395
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 Length = 250 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP P I A ++ ++ ++V D++ I A +AG+ ++ + ++ D
Sbjct: 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDI--LAGFQAGLETILVLSGVSSLDDIDSM 233
Query: 319 IAIYPDLSNVRLKDLELL 336
P + +++++
Sbjct: 234 -PFRPSWIYPSVAEIDVI 250
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 2e-04
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVL 237
+ RP +L + A AG V V T S I G F ++ + + +L
Sbjct: 55 IVLRPQMLPAIATANRAGIPVVV---VTNQSGIA--RGYFGWSAFAAVNGRVLE----LL 105
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQK--------KPDPSIYVTAAKRLGISEKDCLVVEDSV 289
G + + V CA+ V KP+P + V A KRL + + L+V D +
Sbjct: 106 REEGVFV-DMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKL 164
Query: 290 IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL----ELLLQN 339
+QA RAG+A A Q AI P + L DL E L ++
Sbjct: 165 ADMQAGKRAGLAQGWLVDGEAAVQ---PGFAIRPLRDSSELGDLLAAIETLGRD 215
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP P + +A + +G+ +++ D + +G A R GM + T D
Sbjct: 190 KPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVG--GAQRCGMRALQVRTGKFRPSDEHHP 247
Query: 319 IAIYPDLSNVRLKDL-ELLLQN 339
+ D L + +LLLQ+
Sbjct: 248 -EVKADGYVDNLAEAVDLLLQH 268
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} PDB: 1ys9_A 1wvi_A 1ydf_A Length = 264 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 4e-04
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 6/77 (7%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP+ I A + L I ++V D+ I A + ++ T T ++ D
Sbjct: 182 KPNAIIMNKALEILNIPRNQAVMVGDNYLTDI--MAGINNDIDTLLVTTGFTTVEEVPDL 239
Query: 319 IAIYPDLSNVRLKDLEL 335
I P L +
Sbjct: 240 -PIQPSYVLASLDEWTF 255
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* Length = 271 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 5e-04
Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP+P + +++ G+ ++ +V D + + + AG+ ++ T T +D + A
Sbjct: 195 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDV--KLGKNAGIVSILVLTGETTPEDLERA 252
Query: 319 IAIYPDLSNVRLKDLELLLQ 338
PD L +L +Q
Sbjct: 253 -ETKPDFVFKNLGELAKAVQ 271
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} Length = 268 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 6e-04
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP I A LG+ KD VV D + + A G V+ T T ++
Sbjct: 187 KPSEVIMREALDILGLDAKDVAVVGDQIDVDV--AAGKAIGAETVLVLTGVTTRENLDQM 244
Query: 319 IA---IYPDLSNVRLKDLELLLQ 338
I + PD LKD+ L+
Sbjct: 245 IERHGLKPDYVFNSLKDMVEALE 267
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 39.2 bits (92), Expect = 7e-04
Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 18/135 (13%)
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVL 237
E GV+ M E K G + V T S I +FE L ++ L
Sbjct: 49 FEFIDGVIDAMRELKKMGFALVV---VTNQSGIA--RGKFTEAQFETLTEWMDW----SL 99
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQK--------KPDPSIYVTAAKRLGISEKDCLVVEDSV 289
+ + + C H ++ KP P + ++A L I +V D +
Sbjct: 100 ADRDVDL-DGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKL 158
Query: 290 IGLQAATRAGMACVI 304
+QAA A + +
Sbjct: 159 EDMQAAVAANVGTKV 173
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 8e-04
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP+ I A + LG + L+V D+ I A AGM ++ +T T + D
Sbjct: 183 KPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTDD 240
Query: 319 IAIYPDLSNVRLKDLELLLQ 338
P + L + ++
Sbjct: 241 -MEKPTHAIDSLTEWIPYIE 259
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 39.6 bits (92), Expect = 8e-04
Identities = 37/281 (13%), Positives = 84/281 (29%), Gaps = 53/281 (18%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
Q++Q + FD D + +SE +R A D + + D + + ++ +
Sbjct: 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQ----QHLLAVERR--- 63
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVT--DDDQAKLIDLIQDWKTERYQQIIKSGTVEPRP 182
K G+ + + + T + +A++ E + ++ VE
Sbjct: 64 -------NLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHP-VEVIA 115
Query: 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242
GV + A AA V + + +E + F ++
Sbjct: 116 GVREAV-AAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-------------- 160
Query: 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMA 301
+ DP Y + + +++ +S+ ++ G
Sbjct: 161 ------------------SEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGW 202
Query: 302 CV-ITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQNV 340
+ Y + A + A P L V ++ +
Sbjct: 203 GIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAVRAL 243
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 9e-04
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 262 KPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSSTAEQDFKDA 318
KP I A LG+ ++ ++V D+ I Q+ + G+ ++ + T +
Sbjct: 183 KPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPTL 240
Query: 319 IAIYPDLSNVRLKDLEL 335
P L +
Sbjct: 241 -PTPPTYVVDSLDEWTF 256
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.98 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.98 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.96 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.95 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.95 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.95 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.95 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.95 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.95 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.95 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.94 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.94 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.94 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.94 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.93 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.93 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.93 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.93 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.93 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.93 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.93 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.93 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.93 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.93 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.92 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.92 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.92 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.92 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.92 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.92 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.92 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.91 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.91 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.91 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.91 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.91 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.91 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.9 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.9 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.9 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.89 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.88 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.88 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.87 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.87 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.87 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.87 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.85 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.85 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.85 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.83 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.83 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.82 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.82 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.81 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.81 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.81 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.8 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.8 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.79 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.79 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.79 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.78 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.78 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.78 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.77 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.76 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.76 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.76 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.76 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.76 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.72 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.72 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.71 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.71 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.71 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.7 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.7 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.7 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.7 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.69 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.69 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.68 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.68 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.67 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.67 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.65 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.65 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.63 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.63 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.62 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.62 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.62 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.61 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.39 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.58 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.56 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.56 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.55 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.54 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.52 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.5 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.48 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.41 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.38 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.38 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.37 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.35 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.32 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.2 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.19 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.1 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.08 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.99 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.94 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.93 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.87 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.85 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.8 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.74 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.7 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.61 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.42 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.24 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.13 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.07 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.04 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.0 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.93 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 97.92 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.79 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.78 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.72 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.59 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.56 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.5 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.41 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.4 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.26 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 96.92 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 91.79 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 91.17 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 91.08 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 89.56 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 88.64 | |
| 1wv2_A | 265 | Thiazole moeity, thiazole biosynthesis protein THI | 87.08 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 86.5 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 82.41 |
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.6e-31 Score=236.44 Aligned_cols=220 Identities=24% Similarity=0.378 Sum_probs=168.4
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 141 (344)
|+|.+|+|+||+||||+|+...+.++|++++.++|++.+.+. .....|.+.... ..++...+....
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~~~~ 67 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQF-------------NESLKGISRDESLRRILQHGGKEGD 67 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTG-------------GGGGTTCCHHHHHHHHHHHTTCGGG
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH-------------HHHHcCCCHHHHHHHHHHHhhcccc
Confidence 457899999999999999999999999999999998765421 233345554443 344444443211
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
..... ...+.......+...+.. ....++||+.++++.|+++|++++++||+.. ....++.+ ++.
T Consensus 68 -------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~-gl~ 133 (243)
T 4g9b_A 68 -------FNSQE----RAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAAL-ELR 133 (243)
T ss_dssp -------CCHHH----HHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHT-TCG
T ss_pred -------hhHHH----HHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhh-hhc
Confidence 11111 122223333333333332 2346899999999999999999999999765 56678886 777
Q ss_pred hhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 221 RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 221 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
.+ |+.+++ +++++.+||+|++|..+++++|++|++|+||||+.+|+++|+++||
T Consensus 134 ~~--fd~i~~------------------------~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 134 EF--FTFCAD------------------------ASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp GG--CSEECC------------------------GGGCSSCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred cc--cccccc------------------------cccccCCCCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 77 788888 8999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 301 ACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
.+|+|.++.. .++..++++.++.+.+|.++++++.
T Consensus 188 ~~I~V~~g~~------~ad~~~~~~~~l~~~~l~~~~~~l~ 222 (243)
T 4g9b_A 188 RSVGIGAGLT------GAQLLLPSTESLTWPRLSAFWQNVA 222 (243)
T ss_dssp EEEEESTTCC------SCSEEESSGGGCCHHHHHHHHHHHS
T ss_pred EEEEECCCCC------cHHHhcCChhhcCHHHHHHHHHHHH
Confidence 9999988754 3567889999999999999998764
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=237.04 Aligned_cols=223 Identities=21% Similarity=0.348 Sum_probs=167.6
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
..|+|+|+||+||||+|+...+.++|.+++.++|++.+... .....+.......+.+.+.+..
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~---- 85 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKF-------------NESLKGISRMESLDRILEFGNK---- 85 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTG-------------GGGTTTCCHHHHHHHHHHHTTC----
T ss_pred cchhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHH-------------HHHHhCcchHHHHHHhhhhhcC----
Confidence 45799999999999999999999999999999999765421 2223344443333333222111
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
.....+.... .+.+.+.+.|...... ....++||+.++++.|+++|++++++|+... ....++.+ ++..+
T Consensus 86 --~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L~~~-gl~~~ 156 (250)
T 4gib_A 86 --KYSFSEEEKV----RMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVLNHL-GISDK 156 (250)
T ss_dssp --TTTSCHHHHH----HHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHH-TCGGG
T ss_pred --CCCCCHHHHH----HHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHhhhc-ccccc
Confidence 1112222222 2333344444444322 2356899999999999999999998877654 66778886 88777
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.+
T Consensus 157 --Fd~i~~------------------------~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~ 210 (250)
T 4gib_A 157 --FDFIAD------------------------AGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFS 210 (250)
T ss_dssp --CSEECC------------------------GGGCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred --cceeec------------------------ccccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEE
Confidence 799988 899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhh
Q 019226 303 VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 303 v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
|+|.+. +.+..++++++++.+++++.|.+.+.+.+.
T Consensus 211 i~v~~~----~~~~~ad~vi~~l~eL~~~~i~~~~n~~~~ 246 (250)
T 4gib_A 211 VGVGNY----ENLKKANLVVDSTNQLKFEYIQEKYNEYIV 246 (250)
T ss_dssp EEESCT----TTTTTSSEEESSGGGCCHHHHHHHHHHHHH
T ss_pred EEECCh----hHhccCCEEECChHhCCHHHHHHHHHHHHH
Confidence 999643 345678999999999999999998877553
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-30 Score=227.18 Aligned_cols=212 Identities=24% Similarity=0.405 Sum_probs=159.5
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCccccC
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIFD 145 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 145 (344)
+|+|+||+||||+|+...+.+++.+++.++|++.+. +.++...+........ .+...+..
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~------ 61 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTE-------------DLHRRIMGVPEREGLPILMEALEIK------ 61 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHHTTCC------
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchhhhhhhhhhcccch------
Confidence 589999999999999999999999999999987442 2344445555544333 33333322
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL 225 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~ 225 (344)
...+...+.+.+.+...+... ..++||+.++++.|+++|++++++||+....+...++.+ ++..+ |
T Consensus 62 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~-~l~~~--f 127 (216)
T 3kbb_A 62 ------DSLENFKKRVHEEKKRVFSEL-----LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRL-DLEKY--F 127 (216)
T ss_dssp ------SCHHHHHHHHHHHHHHHHHHH-----CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--C
T ss_pred ------hhHHHHHHHHHHHHHHHHHHh-----cccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhc-CCCcc--c
Confidence 122233333333333333333 689999999999999999999999999999999999997 77777 7
Q ss_pred ceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE-
Q 019226 226 DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI- 304 (344)
Q Consensus 226 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~- 304 (344)
|.++. +++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.+|+
T Consensus 128 d~~~~------------------------~~~~~~~KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~ 183 (216)
T 3kbb_A 128 DVMVF------------------------GDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYG 183 (216)
T ss_dssp SEEEC------------------------GGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEE
T ss_pred ccccc------------------------ccccCCCcccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEE
Confidence 99888 89999999999999999999999999999999999999999999999986
Q ss_pred EeCCCchhhhcccc-ccccCCccccCHHHHHHHHHHh
Q 019226 305 TYTSSTAEQDFKDA-IAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 305 v~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+.++....+.+..+ ...+. ++.++.++|.++
T Consensus 184 v~~g~~~~~~l~~~~~~~i~-----~~~eli~~l~eL 215 (216)
T 3kbb_A 184 VVHSLNDGKALLEAGAVALV-----KPEEILNVLKEV 215 (216)
T ss_dssp ECCSSSCCHHHHHTTCSEEE-----CGGGHHHHHHHH
T ss_pred ecCCCCCHHHHHhCCCcEEC-----CHHHHHHHHHHH
Confidence 66666655555332 22222 345555555554
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.9e-29 Score=218.17 Aligned_cols=221 Identities=24% Similarity=0.327 Sum_probs=160.1
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (344)
.+|+|+||+||||+++...+.+++.+++.++|++... ..+....|...... ..++...|...
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~---- 63 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDR-------------DMNERLKGISREESLESILIFGGAET---- 63 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTCCHHHHHHHHHHHTTCTT----
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCCHHHHHHHHHHHhCCCC----
Confidence 3789999999999999999999999999999987432 33555566665544 34455554410
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhC-CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSG-TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+.+.. ..+...+.+.|...+... ...++||+.++|+.|+++|++++++||+.. ++..++.+ ++..+
T Consensus 64 ---~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~-gl~~~- 132 (233)
T 3nas_A 64 ---KYTNAEK----QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRL-AIIDD- 132 (233)
T ss_dssp ---TSCHHHH----HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCTTT-
T ss_pred ---CCCHHHH----HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHc-CcHhh-
Confidence 1122222 233344444455544321 234899999999999999999999999865 77788886 77666
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++.+||++++|..+++++|+++++|++|||+.+|++||+++|+.++
T Consensus 133 -f~~i~~------------------------~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~ 187 (233)
T 3nas_A 133 -FHAIVD------------------------PTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAV 187 (233)
T ss_dssp -CSEECC------------------------C---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEE
T ss_pred -cCEEee------------------------HhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEE
Confidence 688887 8889999999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhhc
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVAA 343 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 343 (344)
++++.. .+..++++++++.++.+..+.+++..+..+
T Consensus 188 ~~~~~~----~~~~ad~v~~s~~el~~~~~~~~~~~~~~~ 223 (233)
T 3nas_A 188 GVGQGQ----PMLGADLVVRQTSDLTLELLHEEWEQYRIR 223 (233)
T ss_dssp ECC-----------CSEECSSGGGCCHHHHHHHHHHHHHT
T ss_pred EECCcc----ccccCCEEeCChHhCCHHHHHHHHHHHHhh
Confidence 986542 334789999999999999999999988765
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=218.49 Aligned_cols=201 Identities=14% Similarity=0.202 Sum_probs=149.4
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++|+|+||+||||+|+...+.+++.+++.++|++... ...+....|.+. ...+... +
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~---~~~~~~~-~------ 59 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPL---ESSFATC-L------ 59 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCH---HHHHHTT-S------
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHcCccH---HHHHHHH-c------
Confidence 45899999999999999999999999999999876432 123444444432 2222221 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
+.+...++ .+.+.+.+.... .....++||+.++|+.|++ |++++++||+....++..++.+ ++..+
T Consensus 60 -----~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~-gl~~~-- 125 (210)
T 2ah5_A 60 -----SKDQISEA----VQIYRSYYKAKG-IYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNL-EIHHF-- 125 (210)
T ss_dssp -----CGGGHHHH----HHHHHHHHHHTG-GGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred -----CHHHHHHH----HHHHHHHHHHhc-cCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhc-Cchhh--
Confidence 11222222 222233333221 1235789999999999999 9999999999998899889886 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++ +..||+|++|..+++++|++|++|++|||+.+|+++|+++|+.+|+
T Consensus 126 f~~i~~------------------------~~--~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~ 179 (210)
T 2ah5_A 126 FDGIYG------------------------SS--PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLA 179 (210)
T ss_dssp CSEEEE------------------------EC--SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred eeeeec------------------------CC--CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEE
Confidence 687777 55 6789999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCccc
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSN 327 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~ 327 (344)
+.++....+.+. .++++++++.+
T Consensus 180 v~~~~~~~~~l~~~~a~~v~~~~~e 204 (210)
T 2ah5_A 180 ITWGFGEQADLLNYQPDYIAHKPLE 204 (210)
T ss_dssp ESSSSSCHHHHHTTCCSEEESSTTH
T ss_pred EcCCCCCHHHHHhCCCCEEECCHHH
Confidence 988766444442 46667766554
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=219.49 Aligned_cols=223 Identities=23% Similarity=0.284 Sum_probs=157.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCC-CCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHH-Hc-CCCCc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFK-EH-GWPSS 141 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~ 141 (344)
|++|+|+||+||||+|+...+.+++.+++.++|++ ... ...+....|.+.......+. .. ++...
T Consensus 2 M~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 69 (240)
T 2hi0_A 2 MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFT------------VEDIKNFFGSGVVVAVTRALAYEAGSSRE 69 (240)
T ss_dssp CSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHTTCCHH
T ss_pred CcccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCC------------HHHHHHhcCccHHHHHHHHHHhccccccc
Confidence 35899999999999999999999999999999986 222 23345556665444332221 10 00000
Q ss_pred cc------cC--CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHH
Q 019226 142 TI------FD--NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL 213 (344)
Q Consensus 142 ~~------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l 213 (344)
.+ +. ....+.+. .+.+.+.+.+.|.... .....++||+.++|+.|+++|++++++||+....++..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l 144 (240)
T 2hi0_A 70 SLVAFGTKDEQIPEAVTQTE----VNRVLEVFKPYYADHC-QIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV 144 (240)
T ss_dssp HHTTTTSTTCCCCTTCCHHH----HHHHHHHHHHHHHHTS-SSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH
T ss_pred ccccccccccccCCCCCHHH----HHHHHHHHHHHHHHhh-hhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 00 00 01111122 2233333444444321 134678999999999999999999999999988888888
Q ss_pred HHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 019226 214 ENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 293 (344)
Q Consensus 214 ~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~ 293 (344)
+.+ ++. + |+.+++ ++++..+||+|++|..+++++|++|++|++|||+.+|++
T Consensus 145 ~~~-~l~-~--f~~~~~------------------------~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~ 196 (240)
T 2hi0_A 145 EEL-FPG-S--FDFALG------------------------EKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQ 196 (240)
T ss_dssp HHH-STT-T--CSEEEE------------------------ECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHH
T ss_pred HHc-CCc-c--eeEEEe------------------------cCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHH
Confidence 886 665 4 688888 888889999999999999999999999999999999999
Q ss_pred HHHHcCCeEEEEeCCCchhhhcc--ccccccCCccccCHHHHHHHH
Q 019226 294 AATRAGMACVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 294 ~a~~aG~~~v~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll 337 (344)
+|+++|+.+|++.++....+.+. .+++++.+ +.+|.+++
T Consensus 197 ~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~-----~~el~~~l 237 (240)
T 2hi0_A 197 TARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT-----AEKLEEAI 237 (240)
T ss_dssp HHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS-----HHHHHHHH
T ss_pred HHHHCCCeEEEECCCCCchhHHHhcCCCEEECC-----HHHHHHHh
Confidence 99999999999988765433332 35556555 44555544
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-28 Score=211.72 Aligned_cols=218 Identities=18% Similarity=0.256 Sum_probs=164.6
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
...++|+|+||+||||+++...+.+++.+++.++|.... ...+....+.........+.....
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~---- 77 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVS-------------RGAILSTVGRPLPASLAGLLGVPV---- 77 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCC-------------HHHHHHHTTSCHHHHHHHHHTSCT----
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCC-------------HHHHHHhcCccHHHHHHHHhCCCC----
Confidence 346799999999999999999999999999999983322 234555566665554443332211
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
...... .+...+.+.|.+.+.. ....++||+.++|+.|+++|++++++||+....++..++.+ ++..
T Consensus 78 -------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~ 145 (237)
T 4ex6_A 78 -------EDPRVA----EATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELT-GLDT 145 (237)
T ss_dssp -------TSHHHH----HHHHHHHHHHHHHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHH-TGGG
T ss_pred -------CHHHHH----HHHHHHHHHHHHhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHc-Cchh
Confidence 122322 2333333444443320 33689999999999999999999999999999899999987 7766
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
+ |+.+++ +++++.+||++++|+.+++++|+++++|++|||+.+|++||+++|+.
T Consensus 146 ~--f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 199 (237)
T 4ex6_A 146 R--LTVIAG------------------------DDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMT 199 (237)
T ss_dssp T--CSEEEC------------------------TTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred h--eeeEEe------------------------CCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 6 688888 89999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHh
Q 019226 302 CVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 302 ~v~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+|+|..+....+.+. .++++++ ++.+|.++|++.
T Consensus 200 ~i~v~~g~~~~~~~~~~~ad~v~~-----~~~el~~~l~~~ 235 (237)
T 4ex6_A 200 VIGVSYGVSGPDELMRAGADTVVD-----SFPAAVTAVLDG 235 (237)
T ss_dssp EEEESSSSSCHHHHHHTTCSEEES-----SHHHHHHHHHHC
T ss_pred EEEEecCCCCHHHHHhcCCCEEEC-----CHHHHHHHHHcc
Confidence 999998866544443 3555554 456677777653
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=215.69 Aligned_cols=210 Identities=21% Similarity=0.370 Sum_probs=164.4
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCc
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSS 141 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 141 (344)
+++++|+|+||+||||+++...+.+++.+++.++|++... ..+....|...... ..++..+|.+.
T Consensus 26 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~- 91 (250)
T 3l5k_A 26 PPQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSW-------------DVKSLVMGKKALEAAQIIIDVLQLPM- 91 (250)
T ss_dssp CCCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTCCHHHHHHHHHHHHTCSS-
T ss_pred cccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHhcCCCHHHHHHHHHHHhCCCC-
Confidence 4567999999999999999999999999999999886432 33455566655543 34555555432
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
.. +.+...+.+.+...+ ....++||+.++|+.|+++|++++++||+....+...+....++..
T Consensus 92 -----------~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~ 154 (250)
T 3l5k_A 92 -----------SK----EELVEESQTKLKEVF--PTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFS 154 (250)
T ss_dssp -----------CH----HHHHHHHHHHHHHHG--GGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHT
T ss_pred -----------CH----HHHHHHHHHHHHHHh--ccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHh
Confidence 11 222233333344432 2368999999999999999999999999998777766655335655
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCC--CCCCCCCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHH
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD--DVKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lgv~~--~~~i~vGDs~~Di~~a~~ 297 (344)
+ |+.+++ ++ ++..+||++++|+.+++++|+++ ++|++|||+.+|++||++
T Consensus 155 ~--f~~~~~------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~ 208 (250)
T 3l5k_A 155 L--FSHIVL------------------------GDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALA 208 (250)
T ss_dssp T--SSCEEC------------------------TTCTTCCSCTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHH
T ss_pred h--eeeEEe------------------------cchhhccCCCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHH
Confidence 5 687877 77 88899999999999999999988 999999999999999999
Q ss_pred cCCeEEEEeCCCchhhhccccccccCCccccC
Q 019226 298 AGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 329 (344)
Q Consensus 298 aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 329 (344)
+|+.++++..+....+....++++++++.++.
T Consensus 209 aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~ 240 (250)
T 3l5k_A 209 AGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ 240 (250)
T ss_dssp TTCEEEECCCTTSCGGGSTTSSEECSCGGGCC
T ss_pred cCCEEEEEcCCCCchhhcccccEeecCHHHhh
Confidence 99999999998876666667889999988875
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-28 Score=213.36 Aligned_cols=217 Identities=22% Similarity=0.378 Sum_probs=161.1
Q ss_pred CCCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHH-cCCCC
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKE-HGWPS 140 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~ 140 (344)
+++++|+|+||+||||+++...+.+++.+++.++|+.... ..+....+..... +..++.. ++...
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~ 86 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSR-------------EEAYMHEGRTGASTINIVFQRELGKEA 86 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSCC
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHhCCCHHHHHHHHHHHHhCCCC
Confidence 4567999999999999999999999999999999887543 2233444444433 3334332 44321
Q ss_pred ccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 141 STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
+.+. ...+...+.+.+... ....++||+.++|+.|+++|++++++||.....+...++. ++.
T Consensus 87 ---------~~~~----~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~ 148 (243)
T 3qxg_A 87 ---------TQEE----IESIYHEKSILFNSY---PEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH--NFP 148 (243)
T ss_dssp ---------CHHH----HHHHHHHHHHHHHTS---SCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH--HST
T ss_pred ---------CHHH----HHHHHHHHHHHHHhc---ccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH--hHH
Confidence 1122 222222223333221 3468999999999999999999999999998877777766 566
Q ss_pred hhccc--ceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 221 RFEGL--DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 221 ~~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
.+ | +.+++ ++++..+||++++|+.+++++|++|++|++|||+.+|++||+++
T Consensus 149 ~~--f~~d~i~~------------------------~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 202 (243)
T 3qxg_A 149 GM--FHKELMVT------------------------AFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKA 202 (243)
T ss_dssp TT--CCGGGEEC------------------------TTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHT
T ss_pred Hh--cCcceEEe------------------------HHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHC
Confidence 65 6 77887 88899999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHhh
Q 019226 299 GMACVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 299 G~~~v~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
|+.+|++.++......+. .++++++ ++.+|.++++.++
T Consensus 203 G~~~i~v~~~~~~~~~l~~~~ad~v~~-----s~~el~~~l~~li 242 (243)
T 3qxg_A 203 GIFTIAVNTGPLDGQVLLDAGADLLFP-----SMQTLCDSWDTIM 242 (243)
T ss_dssp TCEEEEECCSSSCHHHHHHTTCSEEES-----CHHHHHHHHHHHT
T ss_pred CCEEEEEeCCCCCHHHHHhcCCCEEEC-----CHHHHHHHHHhhh
Confidence 999999998877655542 3555554 5566777777664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-28 Score=209.70 Aligned_cols=207 Identities=24% Similarity=0.343 Sum_probs=157.0
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHH-HHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF-KEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~ 143 (344)
+|+|+|+||+||||+++...+.+++.+++.++|++.... .+....+.........+ ...+..
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~---- 65 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHL-------------PPSFFIGGNTKQVWENILRDEYDK---- 65 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTS-------------CHHHHTTSCGGGCHHHHHGGGGGG----
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHH-------------HHHHHcCCCHHHHHHHHHHhhcCC----
Confidence 568999999999999999999999999999998865432 13444555555544333 333221
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
... ..+...+.+.+..........++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 66 --------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 131 (214)
T 3e58_A 66 --------WDV----STLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEEN-RLQGF- 131 (214)
T ss_dssp --------SCH----HHHHHHHHHHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG-
T ss_pred --------CCH----HHHHHHHHHHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHc-CcHhh-
Confidence 111 2222223333332211112368999999999999999999999999999999999987 77766
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++..||++++|+.+++++|+++++|++|||+.+|++||+++|+.++
T Consensus 132 -f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~ 186 (214)
T 3e58_A 132 -FDIVLS------------------------GEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVW 186 (214)
T ss_dssp -CSEEEE------------------------GGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEE
T ss_pred -eeeEee------------------------cccccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEE
Confidence 688888 8888899999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCcccc
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
+++++...... ..++++++++.++
T Consensus 187 ~~~~~~~~~~~-~~a~~~~~~~~el 210 (214)
T 3e58_A 187 AIRDNEFGMDQ-SAAKGLLDSLTDV 210 (214)
T ss_dssp EECCSSSCCCC-TTSSEEESSGGGG
T ss_pred EECCCCccchh-ccHHHHHHHHHHH
Confidence 99876544332 5567788877765
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-28 Score=211.70 Aligned_cols=214 Identities=12% Similarity=0.171 Sum_probs=159.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
.++|+|+||+||||+++...+.+++.+++.++|.+... ...+....|......... ..+++
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~--~~~~~----- 62 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVED------------LSSLNKFVGPPLKTSFME--YYNFD----- 62 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSC------------GGGGGGGSSSCHHHHHHH--HHCCC-----
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhCcCHHHHHHH--HhCCC-----
Confidence 35899999999999999999999999999999887543 112334445443332211 11322
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+.. ..+...+.+.+.... .....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 63 ------~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~-- 128 (226)
T 3mc1_A 63 ------EETA----TVAIDYYRDYFKAKG-MFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHF-KLAFY-- 128 (226)
T ss_dssp ------HHHH----HHHHHHHHHHHTTTG-GGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred ------HHHH----HHHHHHHHHHHHHhC-cccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCHhh--
Confidence 1121 222222222232211 123579999999999999999999999999999899999887 77766
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++.+||++++|..+++++|+++++|++|||+.+|++||+++|+.+|+
T Consensus 129 f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~ 184 (226)
T 3mc1_A 129 FDAIVG------------------------SSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIG 184 (226)
T ss_dssp CSEEEE------------------------ECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEE
T ss_pred eeeeec------------------------cCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEE
Confidence 688888 88889999999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhc--cccccccCCccccCHHHHHHHHHHh
Q 019226 305 TYTSSTAEQDF--KDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 305 v~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+..+....+.+ ..++++++ ++.+|.+++.+.
T Consensus 185 v~~g~~~~~~~~~~~ad~v~~-----s~~el~~~~~~~ 217 (226)
T 3mc1_A 185 VTYGFGSYEELKNAGANYIVN-----SVDELHKKILEL 217 (226)
T ss_dssp ESSSSSCHHHHHHHTCSEEES-----SHHHHHHHHHTC
T ss_pred EccCCCCHHHHHHcCCCEEEC-----CHHHHHHHHHHH
Confidence 99887665555 44555554 456677777653
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=209.60 Aligned_cols=217 Identities=22% Similarity=0.378 Sum_probs=157.7
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHH-cCCCCc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKE-HGWPSS 141 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~ 141 (344)
++++|+|+||+||||+++...+.+++.+++.++|++... ..+....|..... ...++.. +|...
T Consensus 20 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~- 85 (247)
T 3dv9_A 20 SIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSR-------------EEAYMHEGRTGASTINIVSRRERGHDA- 85 (247)
T ss_dssp CCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHTTTSCHHHHHHHHHHHHHSSCC-
T ss_pred CCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCChHHHHHHHHHHhcCCCC-
Confidence 467999999999999999999999999999999987543 2233344444433 3333332 34321
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
+.+.. ..+...+.+.+... ....++||+.++|+.|+++|++++++||+....+...++. ++..
T Consensus 86 --------~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~--~l~~ 148 (247)
T 3dv9_A 86 --------TEEEI----KAIYQAKTEEFNKC---PKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH--NFPG 148 (247)
T ss_dssp --------CHHHH----HHHHHHHHHHHTTS---CCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH--HSTT
T ss_pred --------CHHHH----HHHHHHHHHHHHhc---ccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh--hHHH
Confidence 11221 22222222222221 3468999999999999999999999999998877777776 5665
Q ss_pred hccc--ceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 222 FEGL--DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 222 ~~~~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
+ | +.+++ +++++.+||++++|+.+++++|+++++|++|||+.+|++||+++|
T Consensus 149 ~--f~~~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG 202 (247)
T 3dv9_A 149 I--FQANLMVT------------------------AFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAG 202 (247)
T ss_dssp T--CCGGGEEC------------------------GGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTT
T ss_pred h--cCCCeEEe------------------------cccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCC
Confidence 5 6 77777 888889999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHhhh
Q 019226 300 MACVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 300 ~~~v~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
+.+|++.++......+. .++++++++ .+|.++++.+..
T Consensus 203 ~~~i~v~~~~~~~~~l~~~~ad~v~~~~-----~el~~~l~~~~~ 242 (247)
T 3dv9_A 203 IFTIAVNTGPLHDNVLLNEGANLLFHSM-----PDFNKNWETLQS 242 (247)
T ss_dssp SEEEEECCSSSCHHHHHTTTCSEEESSH-----HHHHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHhcCCCEEECCH-----HHHHHHHHHHHH
Confidence 99999998877655542 456666654 555666665543
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=206.85 Aligned_cols=216 Identities=20% Similarity=0.240 Sum_probs=157.5
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHH-HHHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR-WYFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 142 (344)
..++|+|+||+||||+|+...+.+++.+++.++|++... ...+....+.+..... ..+.....
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~---- 83 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWACK---- 83 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHHH----
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCC------------HHHHHHHhCchHHHHHHHHhhhhhc----
Confidence 466899999999999999999999999999999886432 2234445555543322 22221100
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
.+ ......+. .+.+.+.+.+.|..... ....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 84 ~~-~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-gl~~~ 156 (243)
T 2hsz_A 84 QA-EKELTEDE----FKYFKRQFGFYYGENLC-NISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDHL 156 (243)
T ss_dssp HH-TCCCCHHH----HHHHHHHHHHHHHHHTT-SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG
T ss_pred cc-cccCCHHH----HHHHHHHHHHHHHHhcc-ccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHc-Cchhe
Confidence 00 00111122 22223333344444322 34689999999999999999999999999998899999887 77665
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ ++++...||++++|..+++++|+++++|++|||+.+|+++|+++|+.+
T Consensus 157 --f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~ 210 (243)
T 2hsz_A 157 --FSEMLG------------------------GQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAV 210 (243)
T ss_dssp --CSEEEC------------------------TTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred --EEEEEe------------------------cccCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeE
Confidence 688877 888888999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhh--ccccccccCCcccc
Q 019226 303 VITYTSSTAEQD--FKDAIAIYPDLSNV 328 (344)
Q Consensus 303 v~v~~~~~~~~~--l~~~~~~~~~~~~~ 328 (344)
+++.++...... ...+++++.++.++
T Consensus 211 i~v~~g~~~~~~~~~~~ad~vi~~~~el 238 (243)
T 2hsz_A 211 VGLTYGYNYNIPIAQSKPDWIFDDFADI 238 (243)
T ss_dssp EEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred EEEcCCCCchhhhhhCCCCEEECCHHHH
Confidence 999887543222 34467777776654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=208.86 Aligned_cols=216 Identities=22% Similarity=0.357 Sum_probs=162.7
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 143 (344)
.++|+|+||+||||+++...+.+++.+++.++|++... ..+....+...... ..++...+...
T Consensus 4 ~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--- 67 (233)
T 3s6j_A 4 RPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAM-------------WRIHRKIGMSGGLMLKSLSRETGMSI--- 67 (233)
T ss_dssp -CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHTTSCHHHHHHHHHHC----C---
T ss_pred CcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCH-------------HHHHHHcCCcHHHHHHHHHHhcCCCC---
Confidence 46899999999999999999999999999999987542 23445566665544 33444444321
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
+.+. ...+.+.+.+.|.... ....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 68 ------~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 133 (233)
T 3s6j_A 68 ------TDEQ----AERLSEKHAQAYERLQ--HQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKAL-KLDIN- 133 (233)
T ss_dssp ------CHHH----HHHHHHHHHHHHHHTG--GGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTT-TCCTT-
T ss_pred ------CHHH----HHHHHHHHHHHHHHhh--ccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhc-chhhh-
Confidence 1122 2233333444444322 34689999999999999999999999999998899999886 77665
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++.+||++++|+.+++++|+++++|++|||+.+|++||+++|+.+|
T Consensus 134 -f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i 188 (233)
T 3s6j_A 134 -KINIVT------------------------RDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGV 188 (233)
T ss_dssp -SSCEEC------------------------GGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred -hheeec------------------------cccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEE
Confidence 688887 8888889999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccc--cccccCCccccCHHHHHHHHHHh
Q 019226 304 ITYTSSTAEQDFKD--AIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 304 ~v~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+|.++....+.+.. ++++++ ++.+|.+++++.
T Consensus 189 ~v~~g~~~~~~l~~~~ad~v~~-----~~~el~~~l~~~ 222 (233)
T 3s6j_A 189 GLLSGGYDIGELERAGALRVYE-----DPLDLLNHLDEI 222 (233)
T ss_dssp EEGGGSCCHHHHHHTTCSEEES-----SHHHHHHTGGGT
T ss_pred EEeCCCCchHhHHhcCCCEEEC-----CHHHHHHHHHHH
Confidence 99887655555433 555554 456666666554
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=207.49 Aligned_cols=212 Identities=20% Similarity=0.290 Sum_probs=155.4
Q ss_pred CCCccEEEEecCccccccchhH-HHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-----------HH
Q 019226 64 SQSLQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-----------RW 131 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~-~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 131 (344)
++++|+|+||+||||+++...+ ..++.+++.++|++... ..+....+...... ..
T Consensus 11 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (277)
T 3iru_A 11 AGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQ-------------AEAREPMGTEKSEHIRRMLGNSRIANA 77 (277)
T ss_dssp CCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHTTSHHHHHH
T ss_pred hccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCH-------------HHHHHHhcCchHHHHHHhccchHHHHH
Confidence 4569999999999999988766 78999999999987543 22333333332211 11
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
+...++.. .+.+.... +...+.+.+.+.+. ....++||+.++|+.|+++|++++++||.....++.
T Consensus 78 ~~~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~ 143 (277)
T 3iru_A 78 WLSIKGQA---------SNEEDIKR----LYDLFAPIQTRIVA-QRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAP 143 (277)
T ss_dssp HHHHHSSC---------CCHHHHHH----HHHHHHHHHHHHHH-HTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHH
T ss_pred HHHHhccC---------CCHHHHHH----HHHHHHHHHHHHhh-ccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHH
Confidence 22223322 22223222 23333333433332 236899999999999999999999999999988888
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHh
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVI 290 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~ 290 (344)
.++.+ ++..+. ++.+++ ++++..+||++.+|..+++++|+++ ++|++|||+.+
T Consensus 144 ~l~~~-~~~~~~-~~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~ 197 (277)
T 3iru_A 144 ALIAA-KEQGYT-PASTVF------------------------ATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLP 197 (277)
T ss_dssp HHHHH-HHTTCC-CSEEEC------------------------GGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHH
T ss_pred HHHhc-CcccCC-CceEec------------------------HHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHH
Confidence 88886 554431 577777 8888899999999999999999999 99999999999
Q ss_pred hHHHHHHcCCeEEEEeCCCc-----------------------hhhhc--cccccccCCcccc
Q 019226 291 GLQAATRAGMACVITYTSST-----------------------AEQDF--KDAIAIYPDLSNV 328 (344)
Q Consensus 291 Di~~a~~aG~~~v~v~~~~~-----------------------~~~~l--~~~~~~~~~~~~~ 328 (344)
|++||+++|+.+|+|.++.. ..+.+ ..++++++++.++
T Consensus 198 Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el 260 (277)
T 3iru_A 198 GIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADL 260 (277)
T ss_dssp HHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGT
T ss_pred HHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHH
Confidence 99999999999999998864 22333 3477888887776
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=206.75 Aligned_cols=213 Identities=23% Similarity=0.304 Sum_probs=161.7
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 143 (344)
+++|+|+||+||||+++...+.+++.+++.++|++... ...+....|........ +...+|...
T Consensus 26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 90 (259)
T 4eek_A 26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDL------------TEIAMYFTGQRFDGVLAYLAQQHDFVP--- 90 (259)
T ss_dssp CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCH------------HHHHHHTTTCCHHHHHHHHHHHHCCCC---
T ss_pred cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC---
Confidence 57999999999999999999999999999999887543 22344455666555443 344555432
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..+.. ..+.+.+.+.+ ....++||+.++|+.|+++|++++++||.....++..++.+ ++..+
T Consensus 91 ------~~~~~----~~~~~~~~~~~------~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~- 152 (259)
T 4eek_A 91 ------PPDFL----DVLETRFNAAM------TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVA-GLTEL- 152 (259)
T ss_dssp ------CTTHH----HHHHHHHHHHH------TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHT-TCHHH-
T ss_pred ------CHHHH----HHHHHHHHHHh------ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhc-ChHhh-
Confidence 11221 22222222222 45789999999999999999999999999998899999886 77766
Q ss_pred ccce-eecccchhhhhccCCcCCccccccccCCCCCC-CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 224 GLDC-FLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK-QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 224 ~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
|+. +++ +++++ .+||++++|+.+++++|+++++|++|||+.+|++||+++|+.
T Consensus 153 -f~~~i~~------------------------~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~ 207 (259)
T 4eek_A 153 -AGEHIYD------------------------PSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGAT 207 (259)
T ss_dssp -HCSCEEC------------------------GGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred -ccceEEe------------------------HhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCE
Confidence 577 777 78888 899999999999999999999999999999999999999999
Q ss_pred EEEEeCCCch----hhhc--cccccccCCccccCHHHHHHHHHHh
Q 019226 302 CVITYTSSTA----EQDF--KDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 302 ~v~v~~~~~~----~~~l--~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+|++.++... .+.+ ..++++++ ++.+|.++|.+.
T Consensus 208 ~i~v~~g~~~~~~~~~~~~~~~ad~vi~-----~l~el~~~l~~~ 247 (259)
T 4eek_A 208 LWGLLVPGHPHPDGAAALSRLGAARVLT-----SHAELRAALAEA 247 (259)
T ss_dssp EEEECCTTSCCSSCHHHHHHHTCSEEEC-----SHHHHHHHHHHT
T ss_pred EEEEccCCCcccccHHHHHhcCcchhhC-----CHHHHHHHHHhc
Confidence 9999877543 2333 23455554 556677777654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=204.97 Aligned_cols=209 Identities=22% Similarity=0.288 Sum_probs=153.2
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCC-CCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRC-DPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
++|+|+||+||||+++...+..++.+++.++|.+. ... .+....|.+.......+. +
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-------------~~~~~~g~~~~~~~~~~~--~------- 59 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPD-------------NVTKYIGGGVRALLEKVL--K------- 59 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCS-------------CGGGGCSSCHHHHHHHHH--G-------
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHH-------------HHHHHhCcCHHHHHHHHh--C-------
Confidence 58999999999999999999999999999998862 221 122334443332222111 1
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
..... .+.+.+.+.|.... .....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 60 ------~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-gl~~~-- 125 (222)
T 2nyv_A 60 ------DKFRE----EYVEVFRKHYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDIL-NLSGY-- 125 (222)
T ss_dssp ------GGCCT----HHHHHHHHHHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG--
T ss_pred ------hHHHH----HHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-CCHHH--
Confidence 00001 11222233333221 134689999999999999999999999999998899889887 77665
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++...||++++|..+++++|+++++|++|||+.+|+++|+++|+.+|+
T Consensus 126 f~~i~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 181 (222)
T 2nyv_A 126 FDLIVG------------------------GDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTAL 181 (222)
T ss_dssp CSEEEC------------------------TTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred heEEEe------------------------cCcCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEE
Confidence 688887 88888899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 305 v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+.++....+. ..++++++++ .+|.+++.+.
T Consensus 182 v~~g~~~~~~-~~~~~~~~~~-----~el~~~l~~~ 211 (222)
T 2nyv_A 182 ALWGYVKLNS-QIPDFTLSRP-----SDLVKLMDNH 211 (222)
T ss_dssp ETTSSCSCCC-CCCSEEESST-----THHHHHHHTT
T ss_pred EcCCCCCccc-cCCCEEECCH-----HHHHHHHHHh
Confidence 9877654333 4455555554 4556666544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.8e-26 Score=197.13 Aligned_cols=214 Identities=23% Similarity=0.414 Sum_probs=160.0
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCC-CCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSSTI 143 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~ 143 (344)
|+|+|+||+||||+++...+.+++.+++.++|.. ... ..+....|..... ...++...+.+
T Consensus 1 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~---- 63 (221)
T 2wf7_A 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDR-------------QFNEQLKGVSREDSLQKILDLADKK---- 63 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSH-------------HHHTTTTTCCHHHHHHHHHHHTTCC----
T ss_pred CCcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCH-------------HHHHHhCCCCHHHHHHHHHHHhCCC----
Confidence 3799999999999999998999999999999876 221 2233445555444 33444555432
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
.+.+.. ..+...+.+.|...... ....++||+.++++.|++.|++++++||. ......++.+ ++..+
T Consensus 64 -----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~-~l~~~ 131 (221)
T 2wf7_A 64 -----VSAEEF----KELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERM-NLTGY 131 (221)
T ss_dssp -----CCHHHH----HHHHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHT-TCGGG
T ss_pred -----CChHHH----HHHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHc-ChHHH
Confidence 112222 22233333444443221 13578999999999999999999999998 4466777775 66665
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ +++++..||+|++|+.+++++|+++++|++|||+.+|++||+.+|+.+
T Consensus 132 --f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~ 185 (221)
T 2wf7_A 132 --FDAIAD------------------------PAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALP 185 (221)
T ss_dssp --CSEECC------------------------TTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred --cceEec------------------------cccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEE
Confidence 677777 888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 303 VITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 303 v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
++++.. +.+..++++++++.++.+..+.+.+-
T Consensus 186 ~~~~~~----~~~~~a~~v~~~~~el~~~~~~~~~~ 217 (221)
T 2wf7_A 186 IGVGRP----EDLGDDIVIVPDTSHYTLEFLKEVWL 217 (221)
T ss_dssp EEESCH----HHHCSSSEEESSGGGCCHHHHHHHHH
T ss_pred EEECCH----HHhccccchhcCHHhCCHHHHHHHHh
Confidence 998532 23347889999999999888777553
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=203.87 Aligned_cols=203 Identities=16% Similarity=0.275 Sum_probs=152.6
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++|+|+||+||||+++...+.+++.+++.++|+.... ..+....|.... ..++..|++
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~---~~~~~~~~~----- 60 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAAE---QAMTELGIA----- 60 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCHH---HHHHHTTCC-----
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHcCCcHH---HHHHHcCCC-----
Confidence 46899999999999999999999999999999875332 334445554433 333344432
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
...... .+..+ .+.+... .....++||+.++|+.|+++ ++++++||+....++..++.+ ++..+
T Consensus 61 ------~~~~~~---~~~~~-~~~~~~~--~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-~l~~~-- 124 (209)
T 2hdo_A 61 ------ASEFDH---FQAQY-EDVMASH--YDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSY-PFMMR-- 124 (209)
T ss_dssp ------GGGHHH---HHHHH-HHHHTTC--GGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred ------HHHHHH---HHHHH-HHHHhhh--cccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHc-ChHhh--
Confidence 112111 11111 1111110 13367999999999999999 999999999998888888886 66665
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++.+..||++++|..+++++|+++++|++|||+.+|+++|+++|+.+++
T Consensus 125 f~~~~~------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~ 180 (209)
T 2hdo_A 125 MAVTIS------------------------ADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 180 (209)
T ss_dssp EEEEEC------------------------GGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ccEEEe------------------------cCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEE
Confidence 577777 78888899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhccccccccCCcccc
Q 019226 305 TYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 305 v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++++....+.+..+++++.++.++
T Consensus 181 ~~~~~~~~~~~~~a~~~~~~~~el 204 (209)
T 2hdo_A 181 AVWGMDPNADHQKVAHRFQKPLDI 204 (209)
T ss_dssp EGGGCCTTGGGSCCSEEESSGGGG
T ss_pred EcCCCCChhhhccCCEEeCCHHHH
Confidence 987765444554477777776654
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=204.33 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=149.9
Q ss_pred CCCCccEEEEecCccccccchhHHHHH-HHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHc-CCCC
Q 019226 63 SSQSLQALIFDCDGVIIESEHLHRQAY-NDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GWPS 140 (344)
Q Consensus 63 ~~~~~k~viFD~DGTL~d~~~~~~~a~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~ 140 (344)
.++++|+|+||+||||+++...+.+++ .+++.++|.+... +....+... ...+... +
T Consensus 21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~---------------~~~~~g~~~---~~~~~~~~~--- 79 (231)
T 3kzx_A 21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNID---------------LDSIPNSTI---PKYLITLLG--- 79 (231)
T ss_dssp CCCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCC---------------CTTSCTTTH---HHHHHHHHG---
T ss_pred ccCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHH---------------HHHHhCccH---HHHHHHHhC---
Confidence 356799999999999999998888888 9999999887532 111222221 2222211 1
Q ss_pred ccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc
Q 019226 141 STIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME 220 (344)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~ 220 (344)
... ......+.+.+..........++||+.++|+.|+++|++++++||+....++..++.+ ++.
T Consensus 80 -----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~ 143 (231)
T 3kzx_A 80 -----------KRW----KEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHK-NLT 143 (231)
T ss_dssp -----------GGH----HHHHHHHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCG
T ss_pred -----------chH----HHHHHHHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHC-Cch
Confidence 011 1112222222221111245689999999999999999999999999999899999886 777
Q ss_pred hhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCC-cEEEEecCHhhHHHHHHcC
Q 019226 221 RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEK-DCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 221 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~-~~i~vGDs~~Di~~a~~aG 299 (344)
.+ |+.+++ +++++.+||++++|+.+++++|++++ +|++|||+.+|++||+++|
T Consensus 144 ~~--f~~i~~------------------------~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG 197 (231)
T 3kzx_A 144 HY--FDSIIG------------------------SGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAG 197 (231)
T ss_dssp GG--CSEEEE------------------------ETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTT
T ss_pred hh--eeeEEc------------------------ccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCC
Confidence 66 688888 88899999999999999999999999 9999999999999999999
Q ss_pred CeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 300 MACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 300 ~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
+.+|++.++.. ..+.. ..-++.+|.++|.+++
T Consensus 198 ~~~v~~~~~~~-----~~~~~-----~~~~~~el~~~l~~~l 229 (231)
T 3kzx_A 198 CLPIKYGSTNI-----IKDIL-----SFKNFYDIRNFICQLI 229 (231)
T ss_dssp CEEEEECC----------CCE-----EESSHHHHHHHHHHHH
T ss_pred CeEEEECCCCC-----CCCce-----eeCCHHHHHHHHHHHh
Confidence 99999855433 12233 3445677788887765
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-26 Score=202.36 Aligned_cols=215 Identities=15% Similarity=0.238 Sum_probs=155.0
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHH----HHhhCCChh--------hHHH
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVL----QNQIGGGKP--------KMRW 131 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--------~~~~ 131 (344)
++++|+|+||+||||+++...+.+++.+++.++|++...... ..+..+ ......+.. .+..
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMK-------AQYKTINQGLWRAFEEGKMTRDEVVNTRFSA 76 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHH-------HHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHH-------HHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 467999999999999999999999999999999987543110 001000 000101100 1122
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+..+|.+.. . ..+.+.|..... ....++||+.++|+.|+++ ++++++||.....++.
T Consensus 77 ~~~~~~~~~~------------~--------~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~ 134 (238)
T 3ed5_A 77 LLKEYGYEAD------------G--------ALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYK 134 (238)
T ss_dssp HHHHTTCCCC------------H--------HHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHH
T ss_pred HHHHcCCCCc------------H--------HHHHHHHHHHHH-hcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHH
Confidence 3333332210 0 122233444332 3468999999999999999 9999999999988888
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcC-CCCCcEEEEecCH-
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLG-ISEKDCLVVEDSV- 289 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg-v~~~~~i~vGDs~- 289 (344)
.++.+ ++..+ |+.++. +++++.+||++.+|..+++++| +++++|++|||+.
T Consensus 135 ~l~~~-~l~~~--f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~ 187 (238)
T 3ed5_A 135 RLRDS-GLFPF--FKDIFV------------------------SEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLT 187 (238)
T ss_dssp HHHHT-TCGGG--CSEEEE------------------------GGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTT
T ss_pred HHHHc-ChHhh--hheEEE------------------------ecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcH
Confidence 89886 77776 688887 8888899999999999999999 9999999999998
Q ss_pred hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 290 IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 290 ~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+|++||+++|+.+|+++++.........++++++++ .+|.+++.+
T Consensus 188 ~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~-----~el~~~l~~ 232 (238)
T 3ed5_A 188 ADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKL-----EELYHILNI 232 (238)
T ss_dssp TTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSG-----GGHHHHHTC
T ss_pred HHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCH-----HHHHHHHHh
Confidence 999999999999999988765444444556666554 455666654
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.8e-27 Score=204.77 Aligned_cols=212 Identities=13% Similarity=0.190 Sum_probs=153.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHh-cCCCCCCCccCCCCCChHHHHHHHHhhCCChhh-HHHHHHHcCCCCcc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSH-FNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK-MRWYFKEHGWPSST 142 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 142 (344)
|++|+|+||+||||+++...+.+++.+++.+ +|.+... .+....|..... +..++..+|.+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~-- 65 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGST--------------GSHDFSGKMDGAIIYEVLSNVGLER-- 65 (234)
T ss_dssp -CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC-----------------CCTTCCHHHHHHHHHHTTTCCH--
T ss_pred CcceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCcc--------------chhhhcCCChHHHHHHHHHHcCCCc--
Confidence 3589999999999999999999999999988 6876431 123345555554 445555555421
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
.........+...+.+.+.+.+......++||+.++|+.|+++ |++++++||+....++..++.+ ++..
T Consensus 66 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~ 135 (234)
T 2hcf_A 66 ---------AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDH 135 (234)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCST
T ss_pred ---------ccchhHHHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHC-Cchh
Confidence 0001112233333444444332113357899999999999999 9999999999998888888886 7766
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCC-CCCCCHHHHHHHHHHcC--CCCCcEEEEecCHhhHHHHHHc
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK-QKKPDPSIYVTAAKRLG--ISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~KP~~~~~~~~~~~lg--v~~~~~i~vGDs~~Di~~a~~a 298 (344)
+ |+.++. +++.. .+||++.+|..+++++| +++++|++|||+.+|++||+++
T Consensus 136 ~--f~~~~~------------------------~~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a 189 (234)
T 2hcf_A 136 Y--FPFGAF------------------------ADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAREL 189 (234)
T ss_dssp T--CSCEEC------------------------TTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred h--cCccee------------------------cCCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence 5 565555 55553 46789999999999999 9999999999999999999999
Q ss_pred CCeEEEEeCCCchhhhcc--ccccccCCcccc
Q 019226 299 GMACVITYTSSTAEQDFK--DAIAIYPDLSNV 328 (344)
Q Consensus 299 G~~~v~v~~~~~~~~~l~--~~~~~~~~~~~~ 328 (344)
|+.++++.++....+.+. .++++++++.++
T Consensus 190 G~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el 221 (234)
T 2hcf_A 190 DARSIAVATGNFTMEELARHKPGTLFKNFAET 221 (234)
T ss_dssp TCEEEEECCSSSCHHHHHTTCCSEEESCSCCH
T ss_pred CCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhH
Confidence 999999988876555443 367777776654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=204.84 Aligned_cols=204 Identities=12% Similarity=0.177 Sum_probs=156.4
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 144 (344)
++|+|+||+||||+++...+.+++.+++.++|.+... ..+....+..... .+.. ++++
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~---~~~~~~~~~----- 86 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDL-------------ENLDQFIGPPLHD---TFKEYYKFE----- 86 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCG-------------GGGGGGSSSCHHH---HHHHTSCCC-----
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCccHHH---HHHHHhCCC-----
Confidence 6899999999999999999999999999999887322 1123333333222 2222 2222
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.... ..+...+.+.+.... .....++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 87 ------~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~-- 152 (240)
T 3sd7_A 87 ------DKKA----KEAVEKYREYFADKG-IFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF-DIDRY-- 152 (240)
T ss_dssp ------HHHH----HHHHHHHHHHHHHTG-GGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCGGG--
T ss_pred ------HHHH----HHHHHHHHHHHHHhc-ccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHc-CcHhh--
Confidence 2222 222233333333321 134689999999999999999999999999999899999887 77766
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++++.+||++++|..+++++|++ +++|++|||+.+|+++|+++|+.+|
T Consensus 153 f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i 208 (240)
T 3sd7_A 153 FKYIAG------------------------SNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSI 208 (240)
T ss_dssp CSEEEE------------------------ECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred EEEEEe------------------------ccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEE
Confidence 688888 888999999999999999999999 9999999999999999999999999
Q ss_pred EEeCCCchhhhc--cccccccCCcccc
Q 019226 304 ITYTSSTAEQDF--KDAIAIYPDLSNV 328 (344)
Q Consensus 304 ~v~~~~~~~~~l--~~~~~~~~~~~~~ 328 (344)
++..+....+.+ ..++++++++.++
T Consensus 209 ~v~~g~~~~~~~~~~~ad~v~~~~~el 235 (240)
T 3sd7_A 209 GVLYGYGSFEEISESEPTYIVENVESI 235 (240)
T ss_dssp EESSSSCCHHHHHHHCCSEEESSSTTH
T ss_pred EEeCCCCCHHHHhhcCCCEEECCHHHH
Confidence 999887766665 5577788776654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-26 Score=203.11 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=149.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHh-------hCCCh---h-----hH
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQ-------IGGGK---P-----KM 129 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~-----~~ 129 (344)
|++|+|+||+||||+++...+..++.+++.++|++..... ...+...+... ...+. . .+
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDS------FDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRF 76 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSS------HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCC------HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 5699999999999999999999999999999988642100 01111111110 00000 0 12
Q ss_pred HHHHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhH
Q 019226 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV 209 (344)
Q Consensus 130 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~ 209 (344)
...+...|++. . .....+.+.|..... ....++||+.++++.|+ +|++++++||+.....
T Consensus 77 ~~~~~~~~~~~--------------~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~ 136 (240)
T 3qnm_A 77 FYPLQAVGVED--------------E----ALAERFSEDFFAIIP-TKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQ 136 (240)
T ss_dssp HHHHHHTTCCC--------------H----HHHHHHHHHHHHHGG-GCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHH
T ss_pred HHHHHHcCCCc--------------H----HHHHHHHHHHHHHhh-hcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHH
Confidence 23333333320 1 111222233333322 34689999999999999 9999999999999888
Q ss_pred HHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH
Q 019226 210 ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV 289 (344)
Q Consensus 210 ~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~ 289 (344)
+..++.+ ++..+ |+.+++ +++++.+||++.+|+.+++++|++|++|++|||+.
T Consensus 137 ~~~l~~~-~l~~~--f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 137 SRKMRSA-GVDRY--FKKIIL------------------------SEDLGVLKPRPEIFHFALSATQSELRESLMIGDSW 189 (240)
T ss_dssp HHHHHHH-TCGGG--CSEEEE------------------------GGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred HHHHHHc-ChHhh--ceeEEE------------------------eccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCc
Confidence 8888886 77766 688888 88888999999999999999999999999999996
Q ss_pred -hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 290 -IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 290 -~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+|++||+++|+.+++++++.. ......++++++++.+
T Consensus 190 ~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e 227 (240)
T 3qnm_A 190 EADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKE 227 (240)
T ss_dssp TTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHH
T ss_pred hHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHH
Confidence 999999999999999998876 2222345666665543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-26 Score=200.05 Aligned_cols=216 Identities=19% Similarity=0.230 Sum_probs=150.3
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCC-hHHHHHHHHhh---CC-ChhhHHHHHHHc-CCC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWD-PEFYDVLQNQI---GG-GKPKMRWYFKEH-GWP 139 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~---~~-~~~~~~~~~~~~-g~~ 139 (344)
++|+|+||+||||+++...+..++.+++.+++..... .. ...+..+.... .. ....+..++..+ |..
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLP-------VDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPY 73 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCC-------SCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCC
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHcccc-------ccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCc
Confidence 3789999999999999999888999988877422100 11 12222221100 00 011133334443 332
Q ss_pred CccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc
Q 019226 140 SSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM 219 (344)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~ 219 (344)
. .. ..+.+...+.+.+.. ...++||+.++|+.|+++|++++++||+....++..++.+ ++
T Consensus 74 ~-----------~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l 133 (241)
T 2hoq_A 74 N-----------PK---WISAGVIAYHNTKFA-----YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRL-EL 133 (241)
T ss_dssp C-----------HH---HHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHT-TC
T ss_pred c-----------ch---HHHHHHHHHHHHHHh-----hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHc-Cc
Confidence 1 00 112222222222221 2578999999999999999999999999998888888886 77
Q ss_pred chhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHc
Q 019226 220 ERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRA 298 (344)
Q Consensus 220 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~a 298 (344)
..+ |+.+++ +++++..||++++|..+++++|+++++|++|||+. +|++||+++
T Consensus 134 ~~~--f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~a 187 (241)
T 2hoq_A 134 DDF--FEHVII------------------------SDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRV 187 (241)
T ss_dssp GGG--CSEEEE------------------------GGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred Hhh--ccEEEE------------------------eCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHC
Confidence 766 688887 88888899999999999999999999999999998 999999999
Q ss_pred CCeEEEEeCCCchhhhcc---ccccccCCccccCHHHHHHHHHH
Q 019226 299 GMACVITYTSSTAEQDFK---DAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 299 G~~~v~v~~~~~~~~~l~---~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
|+.++++.++......+. .+++++.++ .+|.+++.+
T Consensus 188 G~~~~~v~~g~~~~~~~~~~~~~~~~i~~~-----~el~~~l~~ 226 (241)
T 2hoq_A 188 GMKTVWFRYGKHSERELEYRKYADYEIDNL-----ESLLEVLAR 226 (241)
T ss_dssp TCEEEEECCSCCCHHHHTTGGGCSEEESST-----THHHHHHHH
T ss_pred CCEEEEECCCCCCcccccccCCCCEEECCH-----HHHHHHHHH
Confidence 999999977765444443 456666654 455555554
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=195.00 Aligned_cols=212 Identities=23% Similarity=0.378 Sum_probs=157.2
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (344)
++|+|+||+||||+++...+.+++.+++.++|.+.... ..+....|...... ...+...++.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~------------~~~~~~~g~~~~~~~~~~~~~~~~~----- 70 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRR------------NELPDTLGLRIDMVVDLWYARQPWN----- 70 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGG------------GGSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChH------------HHHHHHhCCCHHHHHHHHHHHcCCC-----
Confidence 58999999999999999988899999999998764310 01122334443332 2233333332
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
..........+.+.+.+.+.. ...++|++.++++.|++.|++++++||.....++..++.+ ++..+
T Consensus 71 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~~~~~-- 136 (226)
T 1te2_A 71 ------GPSRQEVVERVIARAISLVEE-----TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS-- 136 (226)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred ------ccCHHHHHHHHHHHHHHHHhc-----cCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-CcHhh--
Confidence 112222223333322222221 2578999999999999999999999999988888888886 66665
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
++.+++ +++.+..||++..|+.+++++|+++++|++|||+.+|++|++.+|+.+++
T Consensus 137 ~~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 137 FDALAS------------------------AEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIV 192 (226)
T ss_dssp CSEEEE------------------------CTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred CcEEEe------------------------ccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEE
Confidence 577777 88888899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhh-hccccccccCCccccCHHH
Q 019226 305 TYTSSTAEQ-DFKDAIAIYPDLSNVRLKD 332 (344)
Q Consensus 305 v~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 332 (344)
+.++....+ ....++++++++.++....
T Consensus 193 ~~~~~~~~~~~~~~a~~v~~~~~el~~~~ 221 (226)
T 1te2_A 193 VPAPEAQNDPRFVLANVKLSSLTELTAKD 221 (226)
T ss_dssp CCCTTTTTCGGGGGSSEECSCGGGCCHHH
T ss_pred EcCCCCcccccccccCeEECCHHHHhHHH
Confidence 988765433 3456889999998886433
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=205.48 Aligned_cols=217 Identities=18% Similarity=0.249 Sum_probs=153.2
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH-------h-------hCCChhh----
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN-------Q-------IGGGKPK---- 128 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~-------~~~~~~~---- 128 (344)
+|+|+||+||||+++...+.+++.+++.++|+.... ......+.. . .|.....
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 71 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEP---------SALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLD 71 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCH---------HHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHHHHhhhhccccccccCCCHHHHHHH
Confidence 589999999999999988889999999999987443 111111111 0 1211111
Q ss_pred -HHHHHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 129 -MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 129 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
+...+...|.. . .+.+.......+........+.++||+.++|+.|+++|++++++||....
T Consensus 72 ~~~~~~~~~~~~-------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~ 134 (263)
T 3k1z_A 72 VVLQTFHLAGVQ-------------D----AQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR 134 (263)
T ss_dssp HHHHHHHHTTCC-------------C----HHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred HHHHHHHHcCCC-------------C----HHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH
Confidence 22233333321 0 11222223333443332234579999999999999999999999998775
Q ss_pred hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 019226 208 SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED 287 (344)
Q Consensus 208 ~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD 287 (344)
+...++.+ ++..+ |+.+++ +++++..||++++|..+++++|++|++|++|||
T Consensus 135 -~~~~l~~~-gl~~~--f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD 186 (263)
T 3k1z_A 135 -LEGILGGL-GLREH--FDFVLT------------------------SEAAGWPKPDPRIFQEALRLAHMEPVVAAHVGD 186 (263)
T ss_dssp -HHHHHHHT-TCGGG--CSCEEE------------------------HHHHSSCTTSHHHHHHHHHHHTCCGGGEEEEES
T ss_pred -HHHHHHhC-CcHHh--hhEEEe------------------------ecccCCCCCCHHHHHHHHHHcCCCHHHEEEECC
Confidence 67788886 77666 688887 788888999999999999999999999999999
Q ss_pred CH-hhHHHHHHcCCeEEEEeCCCchhh---hccccccccCCccccCHHHHHHHHHHhhh
Q 019226 288 SV-IGLQAATRAGMACVITYTSSTAEQ---DFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 288 s~-~Di~~a~~aG~~~v~v~~~~~~~~---~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
+. +|+++|+++|+.+++++++..... ....++++++++ .+|.++|.++..
T Consensus 187 ~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l-----~el~~~l~~~~~ 240 (263)
T 3k1z_A 187 NYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSL-----AHLLPALDCLEG 240 (263)
T ss_dssp CHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSG-----GGHHHHHHHHHH
T ss_pred CcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCH-----HHHHHHHHHHHh
Confidence 97 999999999999999998865432 123466666655 455566665543
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-26 Score=198.13 Aligned_cols=213 Identities=14% Similarity=0.146 Sum_probs=148.9
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHH--------h--hCCChh---h-HHH
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQN--------Q--IGGGKP---K-MRW 131 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~---~-~~~ 131 (344)
++|+|+||+||||+++...+.+++.+++.++|..... .....+.. . .|.... . ...
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 72 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKD----------VANAVIEVRNEIKKMRAQASEDPRKVLTGSQEA 72 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHH----------HHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcH----------HHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHH
Confidence 4899999999999999988889999999998875321 11011111 1 133333 1 112
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCC---hhh
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSS 208 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---~~~ 208 (344)
+....|.+ ... ...+. +.+...+ ....++||+.++|+.|+++|++++++||.. ...
T Consensus 73 ~~~~~~~~-----------~~~----~~~~~----~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~ 131 (235)
T 2om6_A 73 LAGKLKVD-----------VEL----VKRAT----ARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSY 131 (235)
T ss_dssp HHHHHTCC-----------HHH----HHHHH----HHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHH
T ss_pred HHHHhCCC-----------HHH----HHHHH----HHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhH
Confidence 22233322 001 11111 1122221 122469999999999999999999999998 887
Q ss_pred HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 019226 209 VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS 288 (344)
Q Consensus 209 ~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs 288 (344)
.+..++.+ ++..+ |+.++. +++++..||++++|..+++++|+++++|++|||+
T Consensus 132 ~~~~l~~~-~l~~~--f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~ 184 (235)
T 2om6_A 132 TRLLLERF-GLMEF--IDKTFF------------------------ADEVLSYKPRKEMFEKVLNSFEVKPEESLHIGDT 184 (235)
T ss_dssp HHHHHHHT-TCGGG--CSEEEE------------------------HHHHTCCTTCHHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHHHHhC-CcHHH--hhhhee------------------------ccccCCCCCCHHHHHHHHHHcCCCccceEEECCC
Confidence 88888886 66665 677777 7778889999999999999999999999999999
Q ss_pred H-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 289 V-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 289 ~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
. ||++||+.+|+.+++++++....+....+++++.++ .+|.++++++.
T Consensus 185 ~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~el~~~l~~~~ 233 (235)
T 2om6_A 185 YAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSI-----ANLKDVIELIS 233 (235)
T ss_dssp TTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSG-----GGHHHHHHHTC
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhH-----HHHHHHHHHHh
Confidence 9 999999999999999988753322223345566554 45666666654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=194.98 Aligned_cols=208 Identities=18% Similarity=0.259 Sum_probs=154.5
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++|+|+||+||||+++...+.+++.+++.++|..... ...+....|.........+... .
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~--~----- 64 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGIT------------DDMIKRTIGKTLEESFSILTGI--T----- 64 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHTTTTSCHHHHHHHHHCC--C-----
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCC------------HHHHHHHhCCcHHHHHHHHcCC--C-----
Confidence 45899999999999999999999999999999876332 2234445555444333322111 0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.... ...+...+.+.+...+. ....++|++.++++.|++.|++++++||......+..++.+ ++..+
T Consensus 65 -----~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~-- 131 (225)
T 3d6j_A 65 -----DADQ----LESFRQEYSKEADIYMN-ANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNH-MPDDW-- 131 (225)
T ss_dssp -----CHHH----HHHHHHHHHHHHHHHTG-GGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTS-SCTTC--
T ss_pred -----CHHH----HHHHHHHHHHHHHHhcc-ccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHc-Cchhh--
Confidence 1111 22333333344444332 23578999999999999999999999999988888888876 66554
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
++.+++ ++++...||++.+|..+++++|+++++|++|||+.+|++|++.+|+.+++
T Consensus 132 ~~~~~~------------------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 132 FDIIIG------------------------GEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp CSEEEC------------------------GGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred eeeeee------------------------hhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 577776 67778899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhcc--ccccccCCcccc
Q 019226 305 TYTSSTAEQDFK--DAIAIYPDLSNV 328 (344)
Q Consensus 305 v~~~~~~~~~l~--~~~~~~~~~~~~ 328 (344)
+.++......+. .++++++++.++
T Consensus 188 ~~~~~~~~~~l~~~~ad~v~~~~~el 213 (225)
T 3d6j_A 188 VTSGMTTAQEFQAYPYDRIISTLGQL 213 (225)
T ss_dssp ETTSSCCTTGGGGSCCSEEESSGGGG
T ss_pred ECCCCCChHHHhhcCCCEEECCHHHH
Confidence 988766555543 267777776665
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=203.30 Aligned_cols=127 Identities=19% Similarity=0.209 Sum_probs=107.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh--hccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL--IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...++||+.++|+.|+++|++++|+||+....++..++.+ .++..+ |+.+++
T Consensus 128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~--fd~i~~------------------------ 181 (261)
T 1yns_A 128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILEL--VDGHFD------------------------ 181 (261)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGG--CSEEEC------------------------
T ss_pred ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhh--ccEEEe------------------------
Confidence 4689999999999999999999999999998888888764 246666 688877
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhh-hc-cccccccCCccccCHH
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ-DF-KDAIAIYPDLSNVRLK 331 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~-~l-~~~~~~~~~~~~~~~~ 331 (344)
+ +++ +||+|++|..+++++|++|++|+||||+.+|+.+|+++||.+|++.++..... .. ..++++++++.++.+.
T Consensus 182 ~-~~~-~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~~~ 258 (261)
T 1yns_A 182 T-KIG-HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELYLP 258 (261)
T ss_dssp G-GGC-CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCBC-
T ss_pred c-CCC-CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhCcC
Confidence 7 788 99999999999999999999999999999999999999999999976543321 11 3467889999887643
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.1e-25 Score=190.10 Aligned_cols=196 Identities=14% Similarity=0.222 Sum_probs=143.4
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhC-CChhhHHHHHH-HcCCCCcc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIG-GGKPKMRWYFK-EHGWPSST 142 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~g~~~~~ 142 (344)
|++|+|+||+||||+++...+.+++.+++.++|+.... ..++...+ .+.......+. ..+++
T Consensus 2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~--- 65 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK-------------EKVREFIFKYSVQDLLVRVAEDRNLD--- 65 (207)
T ss_dssp --CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH-------------HHHHHHHHHSCHHHHHHHHHHHHTCC---
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHccccHHHHHHHhhchhhcc---
Confidence 35899999999999999998989999999998875332 23444444 44433332222 11110
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
..+...+...+.+.+. ....++|++.++++.|+++|++++++||+...... .++.+ ++..+
T Consensus 66 ----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~-~~~~~ 126 (207)
T 2go7_A 66 ----------------VEVLNQVRAQSLAEKN-AQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDL-GVESY 126 (207)
T ss_dssp ----------------HHHHHHHHHHHHTTCG-GGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHH-TCGGG
T ss_pred ----------------HHHHHHHHHHHHHhcc-ccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHc-Cchhh
Confidence 1111112222222211 23578999999999999999999999999988888 77776 66655
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
++.++. +++.+..||++++|..+++++|+++++|++|||+.+|++|++.+|+.+
T Consensus 127 --f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~ 180 (207)
T 2go7_A 127 --FTEILT------------------------SQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 180 (207)
T ss_dssp --EEEEEC------------------------GGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred --eeeEEe------------------------cCcCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeE
Confidence 577776 777788999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhccccccccCCccc
Q 019226 303 VITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 303 v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+++.++. . .++++++++.+
T Consensus 181 i~~~~~~-~-----~a~~v~~~~~e 199 (207)
T 2go7_A 181 INFLEST-Y-----EGNHRIQALAD 199 (207)
T ss_dssp EESSCCS-C-----TTEEECSSTTH
T ss_pred EEEecCC-C-----CCCEEeCCHHH
Confidence 9998775 3 45666666544
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.5e-25 Score=196.79 Aligned_cols=132 Identities=20% Similarity=0.333 Sum_probs=107.8
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|++ +++++|+||+....++..++.+ ++..+ |+.+++ ++
T Consensus 119 ~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--f~~i~~------------------------~~ 170 (260)
T 2gfh_A 119 HMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVI------------------------GG 170 (260)
T ss_dssp TCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEE------------------------GG
T ss_pred cCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhc-CHHhh--hheEEe------------------------cC
Confidence 36899999999999998 5999999999999899999987 77777 688887 88
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCC-eEEEEeCCCchhh-hccccccccCCccccCHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGM-ACVITYTSSTAEQ-DFKDAIAIYPDLSNVRLKDL 333 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~-~~v~v~~~~~~~~-~l~~~~~~~~~~~~~~~~~l 333 (344)
+++.+||+|++|..+++++|++|++|+||||+ .+|+++|+++|| .+|++.++..... ....+++++.++ .+|
T Consensus 171 ~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~-----~el 245 (260)
T 2gfh_A 171 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSV-----LEL 245 (260)
T ss_dssp GSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSG-----GGH
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCH-----HHH
Confidence 88889999999999999999999999999996 899999999999 7999976543211 112345555554 455
Q ss_pred HHHHHHhh
Q 019226 334 ELLLQNVV 341 (344)
Q Consensus 334 ~~ll~~~~ 341 (344)
.++++++.
T Consensus 246 ~~~l~~~~ 253 (260)
T 2gfh_A 246 PALLQSID 253 (260)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 56665543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-25 Score=196.89 Aligned_cols=193 Identities=18% Similarity=0.239 Sum_probs=139.9
Q ss_pred CCccEEEEecCccccccch-hHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHH----------
Q 019226 65 QSLQALIFDCDGVIIESEH-LHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYF---------- 133 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~-~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 133 (344)
+++|+|+||+||||+++.. .+.+++.+++.++|++... ..+....|.........+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 70 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLLKIDHVRALTEMPRIASEW 70 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHHHSHHHHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCH-------------HHHHHHhccchHHHHHHhcccHHHHHHH
Confidence 4589999999999999988 6789999999999886432 233344444433221111
Q ss_pred -HHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 134 -KEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 134 -~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
..++.. .+.+.. ..+...+.+.+...+. ....++||+.++++.|+++|++++++||.....+...
T Consensus 71 ~~~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~ 136 (267)
T 1swv_A 71 NRVFRQL---------PTEADI----QEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIV 136 (267)
T ss_dssp HHHHSSC---------CCHHHH----HHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHH
T ss_pred HHHhCCC---------CCHHHH----HHHHHHHHHHHHHhhc-cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 112211 111221 2222223333333222 3357899999999999999999999999998888888
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~D 291 (344)
++.+ ++..+. ++.+++ ++++..+||++.+|..+++++|+++ ++|++|||+.||
T Consensus 137 l~~~-~~~~~~-~~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nD 190 (267)
T 1swv_A 137 AKEA-ALQGYK-PDFLVT------------------------PDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSD 190 (267)
T ss_dssp HHHH-HHTTCC-CSCCBC------------------------GGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHH
T ss_pred HHHc-CCcccC-hHheec------------------------CCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHH
Confidence 8876 554431 266666 7778889999999999999999999 999999999999
Q ss_pred HHHHHHcCCeEEEEeCCCc
Q 019226 292 LQAATRAGMACVITYTSST 310 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~ 310 (344)
++||+.+|+.++++..+..
T Consensus 191 i~~a~~aG~~~i~v~~~~~ 209 (267)
T 1swv_A 191 MKEGRNAGMWTVGVILGSS 209 (267)
T ss_dssp HHHHHHTTSEEEEECTTCT
T ss_pred HHHHHHCCCEEEEEcCCCC
Confidence 9999999999999998865
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=194.52 Aligned_cols=210 Identities=18% Similarity=0.241 Sum_probs=147.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhh--------CCCh-----hhHHH
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQI--------GGGK-----PKMRW 131 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-----~~~~~ 131 (344)
+++|+|+||+||||+++...+.+++.+++.++|++... ..+...+.... +... ..+..
T Consensus 4 ~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (240)
T 3smv_A 4 TDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTS---------DELLEVFGRNESPQQTETPGALYQDILRAVYDR 74 (240)
T ss_dssp GGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCH---------HHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHH
T ss_pred ccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHH
Confidence 46899999999999999999999999999999887543 11111111110 0011 11223
Q ss_pred HHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH
Q 019226 132 YFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL 211 (344)
Q Consensus 132 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~ 211 (344)
.+..+|++.. . . . ...|...+ ....++||+.++|+.|++ |++++++||+....+..
T Consensus 75 ~~~~~~~~~~---------~----~----~----~~~~~~~~--~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~ 130 (240)
T 3smv_A 75 IAKEWGLEPD---------A----A----E----REEFGTSV--KNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKL 130 (240)
T ss_dssp HHHHTTCCCC---------H----H----H----HHHHHTGG--GGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHH
T ss_pred HHHHhCCCCC---------H----H----H----HHHHHHHH--hcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHH
Confidence 3344443310 0 0 0 11122211 236899999999999999 79999999999988887
Q ss_pred HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHH---HHHcCCCCCcEEEEecC
Q 019226 212 CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTA---AKRLGISEKDCLVVEDS 288 (344)
Q Consensus 212 ~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~---~~~lgv~~~~~i~vGDs 288 (344)
.++.+ ..+ |+.+++ +++++..||+|++|..+ ++++|++|++|++|||+
T Consensus 131 ~l~~l---~~~--fd~i~~------------------------~~~~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~ 181 (240)
T 3smv_A 131 SNAKL---GVE--FDHIIT------------------------AQDVGSYKPNPNNFTYMIDALAKAGIEKKDILHTAES 181 (240)
T ss_dssp HHTTT---CSC--CSEEEE------------------------HHHHTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESC
T ss_pred HHHhc---CCc--cCEEEE------------------------ccccCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCC
Confidence 77664 333 688888 88888999999999999 89999999999999999
Q ss_pred H-hhHHHHHHcCCeEEEEeCCC------chh--hhccccccccCCccccCHHHHHHHHHHhh
Q 019226 289 V-IGLQAATRAGMACVITYTSS------TAE--QDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 289 ~-~Di~~a~~aG~~~v~v~~~~------~~~--~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
. +|++||+++|+.+++++++. ... .....++++++ ++.+|.+++.+.+
T Consensus 182 ~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~-----~~~el~~~l~~~l 238 (240)
T 3smv_A 182 LYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFN-----SMGEMAEAHKQAL 238 (240)
T ss_dssp TTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEES-----SHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeC-----CHHHHHHHHHHHh
Confidence 7 99999999999999998762 111 11234455555 4566777776654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-24 Score=190.30 Aligned_cols=133 Identities=20% Similarity=0.240 Sum_probs=111.9
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
....++||+.++++.|+++|++++++||.....++..++.+ ++..+ |+.+++ +
T Consensus 93 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~------------------------~ 145 (230)
T 3um9_A 93 LSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNS-GLTNS--FDHLIS------------------------V 145 (230)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEE------------------------G
T ss_pred hcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHC-CChhh--cceeEe------------------------h
Confidence 34689999999999999999999999999999899999886 77666 688888 8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc-ccccccCCccccCHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK-DAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~ 334 (344)
++++..||++.+|..+++++|+++++|++|||+.+|++||+++|+.+++++++....+.+. .++++++ ++.+|.
T Consensus 146 ~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~el~ 220 (230)
T 3um9_A 146 DEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVS-----DVGVLA 220 (230)
T ss_dssp GGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEES-----SHHHHH
T ss_pred hhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeC-----CHHHHH
Confidence 8888999999999999999999999999999999999999999999999998865544332 3444444 456666
Q ss_pred HHHHHh
Q 019226 335 LLLQNV 340 (344)
Q Consensus 335 ~ll~~~ 340 (344)
+++.++
T Consensus 221 ~~l~~~ 226 (230)
T 3um9_A 221 SRFSPV 226 (230)
T ss_dssp HTCCC-
T ss_pred HHHHHh
Confidence 666544
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=195.26 Aligned_cols=212 Identities=19% Similarity=0.286 Sum_probs=146.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhh---------------
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK--------------- 128 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 128 (344)
++++|+|+||+||||+++...+.+++.+++.++|.+... ... +....+.....
T Consensus 12 ~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (254)
T 3umg_A 12 GRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDA---------VAF---ADRWRARYQPSMDAILSGAREFVTLD 79 (254)
T ss_dssp CSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCH---------HHH---HHHHHTTHHHHHHHHHTTSSCCCCHH
T ss_pred CCCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCH---------HHH---HHHHHHhHHHHHHHHHhcCCCCCCHH
Confidence 356999999999999999999999999999999886543 111 11111211111
Q ss_pred ------HHHHHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEe
Q 019226 129 ------MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS 202 (344)
Q Consensus 129 ------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivT 202 (344)
+..++..++.+.. ....+ ..+.+...+ ....++||+.++|+.|++. ++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~------~~~~~------------~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t 138 (254)
T 3umg_A 80 ILHRENLDFVLRESGIDPT------NHDSG------------ELDELARAW--HVLTPWPDSVPGLTAIKAE-YIIGPLS 138 (254)
T ss_dssp HHHHHHHHHHHHHTTCCGG------GSCHH------------HHHHHHGGG--GSCCBCTTHHHHHHHHHHH-SEEEECS
T ss_pred HHHHHHHHHHHHHhCCCcC------cCCHH------------HHHHHHHHH--hhCcCCcCHHHHHHHHHhC-CeEEEEe
Confidence 1122222222100 00000 001111111 3467899999999999997 9999999
Q ss_pred CCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 019226 203 AATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDC 282 (344)
Q Consensus 203 n~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~ 282 (344)
|.....++..++.+ ++. |+.+++ +++++..||++.+|+.+++++|+++++|
T Consensus 139 ~~~~~~~~~~l~~~-~~~----f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 189 (254)
T 3umg_A 139 NGNTSLLLDMAKNA-GIP----WDVIIG------------------------SDINRKYKPDPQAYLRTAQVLGLHPGEV 189 (254)
T ss_dssp SSCHHHHHHHHHHH-TCC----CSCCCC------------------------HHHHTCCTTSHHHHHHHHHHTTCCGGGE
T ss_pred CCCHHHHHHHHHhC-CCC----eeEEEE------------------------cCcCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 99998888888886 543 577776 7778889999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEe----CCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 283 LVVEDSVIGLQAATRAGMACVITY----TSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~----~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
++|||+.+|++||+++|+.+++++ ++....+.+. ....+++..-++.+|.++|..
T Consensus 190 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~--~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 190 MLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLA--PTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSS--CSSCCSEEESSHHHHHHHHHH
T ss_pred EEEeCChHhHHHHHHCCCEEEEEecCCcCCCCcccccc--ccCCCceEECCHHHHHHHhcC
Confidence 999999999999999999999998 4433333320 112334444456667777654
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.93 E-value=9e-25 Score=194.44 Aligned_cols=205 Identities=21% Similarity=0.258 Sum_probs=145.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH--------------
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-------------- 129 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 129 (344)
.|++|+|+||+||||+++...+.+++.+++.++|++... ......+ .+......
T Consensus 19 ~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 86 (254)
T 3umc_A 19 FQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPC---------VELTDRW---RQQYKPAMDRVRNGQAPWQHLD 86 (254)
T ss_dssp SSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCH---------HHHHHHH---HHHTHHHHHHHHTTSSCCCCHH
T ss_pred ccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCH---------HHHHHHH---HHHHHHHHHHHhcccCCcccHH
Confidence 467999999999999999999999999999999886543 1111111 11111111
Q ss_pred -------HHHHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEe
Q 019226 130 -------RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCS 202 (344)
Q Consensus 130 -------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivT 202 (344)
..++..++... ... ..+.+...+ ....++||+.++|+.|++. ++++++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~---------~~~------------~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~s 142 (254)
T 3umc_A 87 QLHRQSLEALAGEFGLAL---------DEA------------LLQRITGFW--HRLRPWPDTLAGMHALKAD-YWLAALS 142 (254)
T ss_dssp HHHHHHHHHHHHHTTCCC---------CHH------------HHHHHHGGG--GSCEECTTHHHHHHHHTTT-SEEEECC
T ss_pred HHHHHHHHHHHHHhCCCC---------CHH------------HHHHHHHHH--hcCCCCccHHHHHHHHHhc-CeEEEEe
Confidence 11222222210 000 001111111 2357899999999999986 9999999
Q ss_pred CCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 019226 203 AATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDC 282 (344)
Q Consensus 203 n~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~ 282 (344)
|.....++..++.+ ++. |+.+++ +++++.+||++++|+.+++++|+++++|
T Consensus 143 ~~~~~~~~~~l~~~-g~~----f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 193 (254)
T 3umc_A 143 NGNTALMLDVARHA-GLP----WDMLLC------------------------ADLFGHYKPDPQVYLGACRLLDLPPQEV 193 (254)
T ss_dssp SSCHHHHHHHHHHH-TCC----CSEECC------------------------HHHHTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCCHHHHHHHHHHc-CCC----cceEEe------------------------ecccccCCCCHHHHHHHHHHcCCChHHE
Confidence 99998888888886 543 577777 7778889999999999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEe----CCCchhhhc---cccccccCCccccCHHHHHHHHH
Q 019226 283 LVVEDSVIGLQAATRAGMACVITY----TSSTAEQDF---KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~----~~~~~~~~l---~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
++|||+.+|++||+++|+.+++++ ++....+.+ ..++++++ ++.+|.++|+
T Consensus 194 ~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~-----~l~el~~~l~ 251 (254)
T 3umc_A 194 MLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIAS-----DLLDLHRQLA 251 (254)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEES-----SHHHHHHHHH
T ss_pred EEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEEC-----CHHHHHHHhc
Confidence 999999999999999999999998 444333333 23444554 4566666664
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.9e-25 Score=194.98 Aligned_cols=131 Identities=18% Similarity=0.327 Sum_probs=113.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++ ++++++||.....+...++.+ ++..+ |+.+++ +++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~~~~~--f~~~~~------------------------~~~ 150 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDAL-GIKDL--FDSITT------------------------SEE 150 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------HHH
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHc-CcHHH--cceeEe------------------------ccc
Confidence 57999999999999999 999999999999888889886 77666 688877 777
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
++..||++.+|..+++++|+++++|++|||+. +|++||+++|+.++++..+....+.+..+++++++ +.+|.++
T Consensus 151 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~-----~~el~~~ 225 (234)
T 3u26_A 151 AGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD-----LREVIKI 225 (234)
T ss_dssp HTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESS-----THHHHHH
T ss_pred cCCCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCC-----HHHHHHH
Confidence 88899999999999999999999999999998 99999999999999999887665555556666655 4566677
Q ss_pred HHHhh
Q 019226 337 LQNVV 341 (344)
Q Consensus 337 l~~~~ 341 (344)
++++.
T Consensus 226 l~~~~ 230 (234)
T 3u26_A 226 VDELN 230 (234)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 76654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=195.77 Aligned_cols=130 Identities=18% Similarity=0.274 Sum_probs=112.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~------------------------~~~ 150 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSA-GMSGL--FDHVLS------------------------VDA 150 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTT-TCTTT--CSEEEE------------------------GGG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHC-CcHhh--cCEEEE------------------------ecc
Confidence 689999999999999999999999999999899989886 77666 688887 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc-ccccccCCccccCHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK-DAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~l~~l 336 (344)
++.+||++++|..+++++|+++++|++|||+.+|+.+|+++|+.++++.++....+.+. .++++++ ++.+|.++
T Consensus 151 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~-----~~~el~~~ 225 (233)
T 3umb_A 151 VRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGH-----DMRDLLQF 225 (233)
T ss_dssp TTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEES-----SHHHHHHH
T ss_pred cCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEEC-----CHHHHHHH
Confidence 88999999999999999999999999999999999999999999999998776555442 3444444 55667777
Q ss_pred HHH
Q 019226 337 LQN 339 (344)
Q Consensus 337 l~~ 339 (344)
+++
T Consensus 226 l~~ 228 (233)
T 3umb_A 226 VQA 228 (233)
T ss_dssp HHC
T ss_pred HHH
Confidence 764
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-25 Score=197.40 Aligned_cols=208 Identities=15% Similarity=0.213 Sum_probs=137.9
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCCh---------hhHHHHHHHc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK---------PKMRWYFKEH 136 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 136 (344)
++|+|+||+||||+|+...+.+++.+++.++|++... ..+...+....|... ..+...+..+
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 72 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDL---------RKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYIL 72 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCH---------HHHHHHHHHHGGGCCC-----CCCCCHHHHHHHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCH---------HHHHHHHHHHhhhccCCCccccccccHHHHHHHc
Confidence 5899999999999999988889999999999986432 222233332233221 1134455554
Q ss_pred CCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 137 GWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 137 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
|.+. . .+..+.+. +.|. ......++||+.++|+.|+++|++++++||+.. .++..++.+
T Consensus 73 ~~~~------------~-~~~~~~~~----~~~~---~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~ 131 (220)
T 2zg6_A 73 GIYP------------S-ERLVKELK----EADI---RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKF 131 (220)
T ss_dssp TCCC------------C-HHHHHHHH----HTTT---TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHH
T ss_pred CCCC------------c-HHHHHHHH----HHhh---cccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhc
Confidence 4321 0 11111111 1111 112457999999999999999999999999976 477888886
Q ss_pred hccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHH
Q 019226 217 IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAA 295 (344)
Q Consensus 217 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a 295 (344)
++..+ |+.+++ +++++..||+|++|..+++++|++| +||||+.+ |+++|
T Consensus 132 -gl~~~--f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a 181 (220)
T 2zg6_A 132 -DLKKY--FDALAL------------------------SYEIKAVKPNPKIFGFALAKVGYPA---VHVGDIYELDYIGA 181 (220)
T ss_dssp -TCGGG--CSEEC-----------------------------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCS
T ss_pred -CcHhH--eeEEEe------------------------ccccCCCCCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHH
Confidence 77776 688888 8888899999999999999999988 99999998 99999
Q ss_pred HHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhhh
Q 019226 296 TRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 296 ~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
+++||.+|++.++... ..+ +...-++.+|.+++.+++.
T Consensus 182 ~~aG~~~i~v~~~~~~-~~~--------~~~i~~l~el~~~l~~~~~ 219 (220)
T 2zg6_A 182 KRSYVDPILLDRYDFY-PDV--------RDRVKNLREALQKIEEMNK 219 (220)
T ss_dssp SSCSEEEEEBCTTSCC-TTC--------CSCBSSHHHHHHHHHHHC-
T ss_pred HHCCCeEEEECCCCCC-CCc--------ceEECCHHHHHHHHHHhcc
Confidence 9999999999765332 111 2223356777777777653
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=191.66 Aligned_cols=212 Identities=17% Similarity=0.211 Sum_probs=143.0
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhc---CCCCCCCccCCCCCChHHHHHHHHhhC----CCh---h-----hHH
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIG----GGK---P-----KMR 130 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~-----~~~ 130 (344)
|+|+|+||+||||+++...+..++..++..+ +..... ...+.+..+...+. ... . ...
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGP-------VPVEHLWEIRSRLLDEDPSFKHRISALRRRVLF 73 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCS-------CCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHH
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchh-------hHHHHHHHHHHHHHHhCccccccHHHHHHHHHH
Confidence 4799999999999999887777666655543 332221 11222223322211 000 0 112
Q ss_pred HHHHHcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHH
Q 019226 131 WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVI 210 (344)
Q Consensus 131 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~ 210 (344)
..+...|++ .+....+.+ ...+.|.... ....++||+.++|+.|+++ ++++++||+...
T Consensus 74 ~~~~~~~~~-----------~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~--- 132 (230)
T 3vay_A 74 HALEDAGYD-----------SDEAQQLAD----ESFEVFLHGR--HQVQIFPEVQPTLEILAKT-FTLGVITNGNAD--- 132 (230)
T ss_dssp HHHHTTTCC-----------HHHHHHHHH----HHHHHHHHHH--TCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC---
T ss_pred HHHHHhCCC-----------hhhhHHHHH----HHHHHHHHhh--ccCccCcCHHHHHHHHHhC-CeEEEEECCchh---
Confidence 233333432 222222222 2223333322 4578999999999999998 999999998875
Q ss_pred HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-
Q 019226 211 LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV- 289 (344)
Q Consensus 211 ~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~- 289 (344)
++.+ ++..+ |+.+++ +++++.+||++++|+.+++++|++|++|++|||+.
T Consensus 133 --l~~~-~l~~~--f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 183 (230)
T 3vay_A 133 --VRRL-GLADY--FAFALC------------------------AEDLGIGKPDPAPFLEALRRAKVDASAAVHVGDHPS 183 (230)
T ss_dssp --GGGS-TTGGG--CSEEEE------------------------HHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCTT
T ss_pred --hhhc-CcHHH--eeeeEE------------------------ccccCCCCcCHHHHHHHHHHhCCCchheEEEeCChH
Confidence 4554 66665 688877 77888899999999999999999999999999998
Q ss_pred hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 290 IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 290 ~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+|++||+++|+.++++.++....+....+++++.+ +.+|.+++++
T Consensus 184 ~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~-----l~el~~~l~~ 228 (230)
T 3vay_A 184 DDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHN-----LSQLPEVLAR 228 (230)
T ss_dssp TTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESS-----GGGHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECC-----HHHHHHHHHh
Confidence 99999999999999999887754433345555555 4555666653
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=197.24 Aligned_cols=206 Identities=22% Similarity=0.276 Sum_probs=151.5
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccC
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (344)
++|+|+||+||||+++...+.+++.+++.++|. ... ...+....|.........+....
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~------------~~~~~~~~G~~~~~~~~~~~~~~-------- 92 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDA------------EHVIHISHGWRTYDAIAKFAPDF-------- 92 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCH------------HHHHHHCTTCCHHHHHHHHCGGG--------
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCH------------HHHHHHhcCCCHHHHHHHHhccC--------
Confidence 489999999999999999998999999988873 111 11223334554433322221110
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.. ......+. +.+.+.+. ....++||+.++|+.|+++ |++++++||+....++..++.+ ++..
T Consensus 93 ---~~----~~~~~~~~----~~~~~~~~-~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~-~l~~--- 156 (275)
T 2qlt_A 93 ---AD----EEYVNKLE----GEIPEKYG-EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDIL-KIKR--- 156 (275)
T ss_dssp ---CC----HHHHHHHH----HTHHHHHC-TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHH-TCCC---
T ss_pred ---Cc----HHHHHHHH----HHHHHHHh-cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHc-CCCc---
Confidence 00 11122222 22222221 3467899999999999999 9999999999998888888886 5543
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCC-------CCCcEEEEecCHhhHHHHHH
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGI-------SEKDCLVVEDSVIGLQAATR 297 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv-------~~~~~i~vGDs~~Di~~a~~ 297 (344)
++.+++ ++++..+||++++|..+++++|+ ++++|++|||+.+|++||++
T Consensus 157 f~~i~~------------------------~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~ 212 (275)
T 2qlt_A 157 PEYFIT------------------------ANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKA 212 (275)
T ss_dssp CSSEEC------------------------GGGCSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHH
T ss_pred cCEEEE------------------------cccCCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHH
Confidence 577777 77788899999999999999999 99999999999999999999
Q ss_pred cCCeEEEEeCCCchhhhcc-ccccccCCccccCHHH
Q 019226 298 AGMACVITYTSSTAEQDFK-DAIAIYPDLSNVRLKD 332 (344)
Q Consensus 298 aG~~~v~v~~~~~~~~~l~-~~~~~~~~~~~~~~~~ 332 (344)
+|+.+++|.++....+... .++++++++.++.+..
T Consensus 213 AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~~ 248 (275)
T 2qlt_A 213 AGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGE 248 (275)
T ss_dssp TTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEECC
T ss_pred cCCEEEEECCCCCHHHHhhCCCCEEECChHHcChhh
Confidence 9999999998766443333 4788999988876543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=185.33 Aligned_cols=132 Identities=19% Similarity=0.230 Sum_probs=107.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
....++||+.++|+.|+++|++++++||+....++..++.+ ++..+...+.+++ +
T Consensus 67 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~f~~~~i~~------------------------~ 121 (205)
T 3m9l_A 67 QGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAI-GLADCFAEADVLG------------------------R 121 (205)
T ss_dssp EEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGGSCGGGEEC------------------------T
T ss_pred hcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHc-CchhhcCcceEEe------------------------C
Confidence 34689999999999999999999999999999999999887 7776621155555 4
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
+. ..+||++++|+.+++++|+++++|++|||+.+|++||+++|+.+|++.++..... ..+++++ -++.+|.+
T Consensus 122 ~~-~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~--~~ad~v~-----~~~~el~~ 193 (205)
T 3m9l_A 122 DE-APPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWP--ELTDWHA-----RDCAQLRD 193 (205)
T ss_dssp TT-SCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCG--GGCSEEC-----SSHHHHHH
T ss_pred CC-CCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCccc--ccCCEEe-----CCHHHHHH
Confidence 44 7899999999999999999999999999999999999999999999988764322 2234444 46677777
Q ss_pred HHHHh
Q 019226 336 LLQNV 340 (344)
Q Consensus 336 ll~~~ 340 (344)
++++-
T Consensus 194 ~~~~~ 198 (205)
T 3m9l_A 194 LLSAE 198 (205)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 77653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.7e-24 Score=188.27 Aligned_cols=131 Identities=27% Similarity=0.379 Sum_probs=109.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~-~l~~~--f~~~~~------------------------~~~ 156 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKAS-KLDRV--LDSCLS------------------------ADD 156 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------GGG
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhc-CcHHH--cCEEEE------------------------ccc
Confidence 689999999999999999999999999999899999886 77766 688887 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc-ccc-ccccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDA-IAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l-~~~-~~~~~~~~~~~~~~l~~ 335 (344)
++..||++++|..+++++|+++++|++|||+.+|+++|+++|+.++++.++.. .+.+ ..+ ++++.+ +.+|.+
T Consensus 157 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~-~~~~~~~~~~~~~~~-----~~el~~ 230 (240)
T 2no4_A 157 LKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGN-PPEYEFAPLKHQVNS-----LSELWP 230 (240)
T ss_dssp TTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCC-CCCCTTSCCSEEESS-----GGGHHH
T ss_pred cCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCC-CCcccCCCCceeeCC-----HHHHHH
Confidence 88899999999999999999999999999999999999999999999988765 2222 234 555555 455566
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
++.+.+
T Consensus 231 ~l~~~~ 236 (240)
T 2no4_A 231 LLAKNV 236 (240)
T ss_dssp HHCC--
T ss_pred HHHHhh
Confidence 665544
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.4e-24 Score=186.26 Aligned_cols=211 Identities=21% Similarity=0.349 Sum_probs=150.1
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTI 143 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 143 (344)
+++|+|+||+||||+++...+.+++.+++.++|.+... ...+....+...... ..++..++...
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 66 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV------------EEMGERFAGMTWKNILLQVESEASIPL--- 66 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH------------HHHHHHHTTCCHHHHHHHHHHHHCCCC---
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCH------------HHHHHHHhCCCHHHHHHHHHHHcCCCC---
Confidence 35899999999999999998889999999999876431 122344455554443 33444444321
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
.... ...+.+.+.+.+.. ...++||+.++++.|+. +++++||+....++..++.+ ++..+
T Consensus 67 ------~~~~----~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~-~l~~~- 126 (229)
T 2fdr_A 67 ------SASL----LDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY- 126 (229)
T ss_dssp ------CTHH----HHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG-
T ss_pred ------CHHH----HHHHHHHHHHHhhc-----CCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhC-ChHHh-
Confidence 1111 12222222222221 25789999999998874 89999999998888888886 66665
Q ss_pred cc-ceeecccchhhhhccCCcCCccccccccCCCCCCCC--CCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 224 GL-DCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQK--KPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 224 ~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+ +.+++ +++++.+ ||++.+|..+++++|+++++|++|||+.+|++||+.+|+
T Consensus 127 -~~~~~~~------------------------~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~ 181 (229)
T 2fdr_A 127 -FAPHIYS------------------------AKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGM 181 (229)
T ss_dssp -TTTCEEE------------------------HHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred -ccceEEe------------------------ccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCC
Confidence 6 66666 6667778 999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCch----hhhcc--ccccccCCccccCHHHHHHHHHHh
Q 019226 301 ACVITYTSSTA----EQDFK--DAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 301 ~~v~v~~~~~~----~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
.+++++++... .+.+. .+++++.++.+ |.++++++
T Consensus 182 ~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~e-----l~~~l~~~ 222 (229)
T 2fdr_A 182 RVIGFTGASHTYPSHADRLTDAGAETVISRMQD-----LPAVIAAM 222 (229)
T ss_dssp EEEEECCSTTCCTTHHHHHHHHTCSEEESCGGG-----HHHHHHHH
T ss_pred EEEEEecCCccchhhhHHHhhcCCceeecCHHH-----HHHHHHHh
Confidence 99999877652 12232 25677766554 55555543
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.4e-24 Score=188.48 Aligned_cols=131 Identities=21% Similarity=0.267 Sum_probs=107.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~------------------------~~~ 146 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLS------------------------VDP 146 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------SGG
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhc-ChHhh--hheEEE------------------------ecc
Confidence 578999999999999999999999999998888888886 77665 688887 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc-cccccccCCccccCHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~l 336 (344)
++.+||++++|..+++++|+++++|++|||+.+|+++|+++|+.++++.++....+.+ ..+++++.+ +.+|.++
T Consensus 147 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~el~~~ 221 (232)
T 1zrn_A 147 VQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS-----LRAVVEL 221 (232)
T ss_dssp GTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS-----HHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC-----HHHHHHH
Confidence 8889999999999999999999999999999999999999999999998875543332 234555544 4555555
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
+.+.
T Consensus 222 l~~~ 225 (232)
T 1zrn_A 222 FETA 225 (232)
T ss_dssp C---
T ss_pred HHhh
Confidence 5443
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-23 Score=182.86 Aligned_cols=203 Identities=17% Similarity=0.200 Sum_probs=135.0
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHH-------HHhhCCChhhHHH-----HHH
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVL-------QNQIGGGKPKMRW-----YFK 134 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~~~ 134 (344)
+|+|+||+||||+++...+.+++.+++..+...... ......+ ....+.+...... .+.
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTS---------KEISAALFQTEMNNLQILGYGAKAFTISMVETALQ 78 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCH---------HHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCH---------HHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHH
Confidence 899999999999999988888877665554332111 1111111 1223433333211 111
Q ss_pred HcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcC-CeEEEEeCCChhhHHHHH
Q 019226 135 EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCL 213 (344)
Q Consensus 135 ~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~~~l 213 (344)
..+.. .+.+. ...+.+ .+.+.+ .....++||+.++++.|+++| ++++++||.....+...+
T Consensus 79 ~~~~~---------~~~~~----~~~~~~----~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l 140 (234)
T 3ddh_A 79 ISNGK---------IAADI----IRQIVD----LGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL 140 (234)
T ss_dssp HTTTC---------CCHHH----HHHHHH----HHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH
T ss_pred HhcCC---------CCHHH----HHHHHH----HHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH
Confidence 22211 11122 122222 222222 245689999999999999999 999999999998888888
Q ss_pred HHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhH
Q 019226 214 ENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGL 292 (344)
Q Consensus 214 ~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di 292 (344)
+.+ ++..+ |+.+++ + .||++.+|+.+++++|++|++|++|||+. +|+
T Consensus 141 ~~~-~~~~~--f~~~~~------------------------~-----~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di 188 (234)
T 3ddh_A 141 ERS-GLSPY--FDHIEV------------------------M-----SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDI 188 (234)
T ss_dssp HHH-TCGGG--CSEEEE------------------------E-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred HHh-CcHhh--hheeee------------------------c-----CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHh
Confidence 886 66665 566655 2 58999999999999999999999999997 999
Q ss_pred HHHHHcCCeEEEEeCCC----chhhhcccc-ccccCCcccc
Q 019226 293 QAATRAGMACVITYTSS----TAEQDFKDA-IAIYPDLSNV 328 (344)
Q Consensus 293 ~~a~~aG~~~v~v~~~~----~~~~~l~~~-~~~~~~~~~~ 328 (344)
+||+++|+.++++.++. ...+....+ +++++++.++
T Consensus 189 ~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el 229 (234)
T 3ddh_A 189 QPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229 (234)
T ss_dssp HHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGH
T ss_pred HHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHH
Confidence 99999999999995543 222222223 5666665443
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=181.73 Aligned_cols=182 Identities=15% Similarity=0.213 Sum_probs=132.4
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++|+|+||+||||+++...+.+++.+++.++|++... ..+....+.. .........+-.
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~--~~~~~~~~~~~~----- 63 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVS--TPFAIETFAPNL----- 63 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHC--HHHHHHHHCTTC-----
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCH-------------HHHHHHHccc--cHHHHHHHhhhH-----
Confidence 35899999999999999999999999999999886432 1222222111 112222222100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.. ... .+.+.+..... . ..++||+.++++.|+++|++++++||... .++..++.+ ++..+
T Consensus 64 -------~~---~~~----~~~~~~~~~~~-~-~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~-~~~~~-- 123 (190)
T 2fi1_A 64 -------EN---FLE----KYKENEARELE-H-PILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKT-SIAAY-- 123 (190)
T ss_dssp -------TT---HHH----HHHHHHHHHTT-S-CCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHT-TCGGG--
T ss_pred -------HH---HHH----HHHHHHHHhcC-c-CccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHc-CCHhh--
Confidence 00 011 12222333322 2 24899999999999999999999999864 577777776 66655
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ ++++..+||++++|..+++++|++ +|++|||+.+|++||+.+|+.+++
T Consensus 124 f~~~~~------------------------~~~~~~~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~ 177 (190)
T 2fi1_A 124 FTEVVT------------------------SSSGFKRKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHL 177 (190)
T ss_dssp EEEEEC------------------------GGGCCCCTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEE
T ss_pred eeeeee------------------------ccccCCCCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEE
Confidence 577777 778888999999999999999998 999999999999999999999999
Q ss_pred EeCCCchh
Q 019226 305 TYTSSTAE 312 (344)
Q Consensus 305 v~~~~~~~ 312 (344)
++++....
T Consensus 178 ~~~~~~~~ 185 (190)
T 2fi1_A 178 FTSIVNLR 185 (190)
T ss_dssp CSCHHHHH
T ss_pred ECCCCChh
Confidence 88765443
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=188.36 Aligned_cols=206 Identities=13% Similarity=0.183 Sum_probs=128.9
Q ss_pred CCccEEEEecCccccccchh-------HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-c
Q 019226 65 QSLQALIFDCDGVIIESEHL-------HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-H 136 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~-------~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 136 (344)
+++|+|+|||||||+|++.. +.+.+.+.+.++|... ...+.+....+.........+.. +
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~~~g~~~~~~~~~l~~~~ 96 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDS------------PVSNILSQFHIDNKEQLQAHILELV 96 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTS------------HHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcH------------HHHHHHHHhhhccHHHHHHHHHHHH
Confidence 45899999999999998643 3344555555555431 11112222223334444433332 1
Q ss_pred CCCCccccCCCCCCchhHHHHHHHH-HHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 137 GWPSSTIFDNPPVTDDDQAKLIDLI-QDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 137 g~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
+.. ...... +.+ ...+.+.|... .....++||+.++|+. |++++|+||+....++..++.
T Consensus 97 ~~~---------~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~ 157 (253)
T 2g80_A 97 AKD---------VKDPIL----KQLQGYVWAHGYESG--QIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGY 157 (253)
T ss_dssp HTT---------CCCHHH----HHHHHHHHHHHHHTT--SCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHS
T ss_pred hcc---------cchHHH----HHHHHHHHHHHHHhC--cccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHh
Confidence 111 001111 111 12222233221 1246789999999988 899999999999988888876
Q ss_pred h--h--------ccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 019226 216 L--I--------GMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVV 285 (344)
Q Consensus 216 l--~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~v 285 (344)
+ + ++..+ ++.++. . .+...||+|++|..+++++|++|++|+||
T Consensus 158 ~~~g~~~~~~~l~l~~~--~~~~f~------------------------~-~~~g~KP~p~~~~~a~~~lg~~p~~~l~v 210 (253)
T 2g80_A 158 VQDPNAPAHDSLDLNSY--IDGYFD------------------------I-NTSGKKTETQSYANILRDIGAKASEVLFL 210 (253)
T ss_dssp BCCTTCTTSCCBCCGGG--CCEEEC------------------------H-HHHCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred hcccccccccccchHhh--cceEEe------------------------e-eccCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 4 2 34333 444443 2 12115999999999999999999999999
Q ss_pred ecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 286 EDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 286 GDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
||+.+|+++|+++||.+|++.++.........+..++.++.++
T Consensus 211 gDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 211 SDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp ESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred cCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 9999999999999999999977443221111245667776653
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-23 Score=182.37 Aligned_cols=213 Identities=16% Similarity=0.120 Sum_probs=142.3
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHH---hcCCCCC--CCccCCCCCChHHHHHHH--HhhCCChhhHHHHHH---
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFS---HFNVRCD--PSSQQSLNWDPEFYDVLQ--NQIGGGKPKMRWYFK--- 134 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~---~~g~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--- 134 (344)
|++|+|+||+||||+|+...+..++.+++. ++|+... . +..-....+. ...|.+...+...+.
T Consensus 11 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 83 (251)
T 2pke_A 11 QAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRM-------QQHLLAVERRNLKIFGYGAKGMTLSMIETA 83 (251)
T ss_dssp CSCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC------------CTTHHHHHHHHHHHHCSSHHHHHHHHHHHH
T ss_pred CceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHH-------HHHHHHHHhhhhhhccCcchHHHHHHHHHH
Confidence 368999999999999999999899888874 5676531 1 1010011121 245666554443322
Q ss_pred --HcCCCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHH
Q 019226 135 --EHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILC 212 (344)
Q Consensus 135 --~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~ 212 (344)
..+.. .. ...... +.+.|.+.+ .....++||+.++|+.|+ +|++++++||+....+...
T Consensus 84 ~~~~~~~---------~~----~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~ 144 (251)
T 2pke_A 84 IELTEAR---------IE----ARDIQR----IVEIGRATL-QHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQK 144 (251)
T ss_dssp HHHTTTC---------CC----HHHHHH----HHHHHHHHH-TCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHH
T ss_pred HHhcCCC---------CC----hHHHHH----HHHHHHHHH-hccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHH
Confidence 12211 11 111122 222233332 245689999999999999 9999999999998888888
Q ss_pred HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hh
Q 019226 213 LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IG 291 (344)
Q Consensus 213 l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~D 291 (344)
++.+ ++..+ |+.+++ . .||++++|..+++++|+++++|++|||+. +|
T Consensus 145 l~~~-~l~~~--f~~i~~------------------------~-----~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~D 192 (251)
T 2pke_A 145 IEQS-GLSDL--FPRIEV------------------------V-----SEKDPQTYARVLSEFDLPAERFVMIGNSLRSD 192 (251)
T ss_dssp HHHH-SGGGT--CCCEEE------------------------E-----SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCC
T ss_pred HHHc-CcHHh--Cceeee------------------------e-----CCCCHHHHHHHHHHhCcCchhEEEECCCchhh
Confidence 8886 66665 465554 1 68999999999999999999999999999 99
Q ss_pred HHHHHHcCCeEEEEeCCCchh----hhc--ccccc-ccCCccccCHHHHHHHHHHh
Q 019226 292 LQAATRAGMACVITYTSSTAE----QDF--KDAIA-IYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 292 i~~a~~aG~~~v~v~~~~~~~----~~l--~~~~~-~~~~~~~~~~~~l~~ll~~~ 340 (344)
+++|+++|+.++++.++.... +.+ ..+++ ++.++.+ |.+++.++
T Consensus 193 i~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~e-----l~~~l~~~ 243 (251)
T 2pke_A 193 VEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSG-----WPAAVRAL 243 (251)
T ss_dssp CHHHHHTTCEEEECCCC-------------CCTTEEECSSGGG-----HHHHHHHH
T ss_pred HHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHH-----HHHHHHHh
Confidence 999999999999997765421 112 23454 5666554 44555443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=189.62 Aligned_cols=208 Identities=18% Similarity=0.250 Sum_probs=136.2
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhc-----CCCCCCCccCCCCCChHHHHHHHHh-hCCChhhHHHHHHHcC
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHF-----NVRCDPSSQQSLNWDPEFYDVLQNQ-IGGGKPKMRWYFKEHG 137 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 137 (344)
..++|+|+||+||||+++...+.+++.+++.++ |+.. .....+... .......+..++..++
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSP------------EDAHVLNNSYYKEYGLAIRGLVMFHK 121 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCH------------HHHHHHHHHHHHHTHHHHHHHHHTTS
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCH------------HHHHHHHHHHHHHHhhhHHHHHHHcC
Confidence 356899999999999999887777777776653 4331 111111110 0000111222333333
Q ss_pred CCCccccCCCCCCchhHHHHHHHHHHHHHHHHHHHH-HhCCCccCccHHHHHHHHHHcCC--eEEEEeCCChhhHHHHHH
Q 019226 138 WPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQII-KSGTVEPRPGVLRLMDEAKAAGK--KVAVCSAATKSSVILCLE 214 (344)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~pgv~~~l~~Lk~~g~--~v~ivTn~~~~~~~~~l~ 214 (344)
+. .. .+. +.+.... ......++||+.++|+.|+++|+ +++++||+....++..++
T Consensus 122 ~~-----------~~-------~~~----~~~~~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~ 179 (282)
T 3nuq_A 122 VN-----------AL-------EYN----RLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLR 179 (282)
T ss_dssp SC-----------HH-------HHH----HHHTTTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHH
T ss_pred CC-----------HH-------HHH----HHHhhhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHH
Confidence 21 11 111 1111110 01236789999999999999999 999999999999999998
Q ss_pred HhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHH
Q 019226 215 NLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQ 293 (344)
Q Consensus 215 ~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~ 293 (344)
.+ ++..+ |+.+++. ...+.++..+||++++|+.+++++|+++ ++|++|||+.+|+.
T Consensus 180 ~~-gl~~~--fd~v~~~--------------------~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~ 236 (282)
T 3nuq_A 180 LL-GIADL--FDGLTYC--------------------DYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIE 236 (282)
T ss_dssp HH-TCTTS--CSEEECC--------------------CCSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHH
T ss_pred hC-Ccccc--cceEEEe--------------------ccCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHH
Confidence 86 77665 6777760 0002333668999999999999999998 99999999999999
Q ss_pred HHHHcCCe-EEEEeCCCchhh--hccccccccCCcccc
Q 019226 294 AATRAGMA-CVITYTSSTAEQ--DFKDAIAIYPDLSNV 328 (344)
Q Consensus 294 ~a~~aG~~-~v~v~~~~~~~~--~l~~~~~~~~~~~~~ 328 (344)
||+++|+. ++++..+..... ..+.+++++.++.++
T Consensus 237 ~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el 274 (282)
T 3nuq_A 237 TGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILEL 274 (282)
T ss_dssp HHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGG
T ss_pred HHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHH
Confidence 99999995 555554443221 123456777776654
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-24 Score=185.88 Aligned_cols=193 Identities=19% Similarity=0.313 Sum_probs=133.5
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|++|+|+||+||||+++.. ..+++.+++.++|++.... .............+......++......
T Consensus 2 M~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 67 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDF--------TERHRLAAPELELGRMTLAEYLEQVVFY----- 67 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHH--------HHHHHHHHHHHHTTSSCHHHHHHHHTTT-----
T ss_pred CCceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHH--------HHHHHhhchHHHcCCcCHHHHHHHHHHH-----
Confidence 3589999999999999874 3577888888888753210 0000011111111111122222221100
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+. .... + .+.+.+ .. ...++||+.++|+.|+++| +++++||+....+...++.+ ++..+
T Consensus 68 --~~~-~~~~----~----~~~~~~----~~-~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~-~~~~~-- 127 (200)
T 3cnh_A 68 --QPR-DFTP----E----DFRAVM----EE-QSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTF-GLGEF-- 127 (200)
T ss_dssp --SCC-SSCH----H----HHHHHH----HH-TCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHH-TGGGT--
T ss_pred --cCC-CCCH----H----HHHHHH----Hh-cCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhC-CHHHh--
Confidence 000 0000 0 111111 11 2469999999999999999 99999999999889888887 66665
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++..||++++|..+++++|+++++|++|||+.+|+++|+++|+.+++
T Consensus 128 f~~~~~------------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~ 183 (200)
T 3cnh_A 128 LLAFFT------------------------SSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQ 183 (200)
T ss_dssp CSCEEE------------------------HHHHSCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred cceEEe------------------------ecccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEE
Confidence 677777 77788899999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhc
Q 019226 305 TYTSSTAEQDF 315 (344)
Q Consensus 305 v~~~~~~~~~l 315 (344)
+.++....+.+
T Consensus 184 ~~~~~~~~~~l 194 (200)
T 3cnh_A 184 CVDAAQLREEL 194 (200)
T ss_dssp CSCHHHHHHHH
T ss_pred ECCchhhHHHH
Confidence 98876655544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-24 Score=181.90 Aligned_cols=126 Identities=20% Similarity=0.305 Sum_probs=105.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.+ |+.|+++ ++++++||.....++..++.+ ++..+ |+.+++ +++
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-~l~~~--f~~~~~------------------------~~~ 123 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERN-GLLRY--FKGIFS------------------------AES 123 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------GGG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHC-CcHHh--CcEEEe------------------------hhh
Confidence 689999999 9999999 999999999988889889886 77666 688887 788
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc-cccccccCCccccCHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l-~~~~~~~~~~~~~~~~~l~~l 336 (344)
++..||+|++|..+++++| +++|++|||+.+|+++|+++|+.++++.++....+.+ ..++++++ ++.+|.++
T Consensus 124 ~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~el~~~ 196 (201)
T 2w43_A 124 VKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVN-----DFKELYEW 196 (201)
T ss_dssp GTCCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEES-----SHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEEC-----CHHHHHHH
Confidence 8889999999999999999 9999999999999999999999999998865543322 23444444 45666666
Q ss_pred HHH
Q 019226 337 LQN 339 (344)
Q Consensus 337 l~~ 339 (344)
+.+
T Consensus 197 l~~ 199 (201)
T 2w43_A 197 ILR 199 (201)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-24 Score=183.77 Aligned_cols=109 Identities=15% Similarity=0.224 Sum_probs=95.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh-----hccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL-----IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
..++||+.++|+.|++ |++++++||+....++..++.+ .++..+ |+.+++
T Consensus 88 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~--f~~~~~---------------------- 142 (211)
T 2i6x_A 88 EEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSF--FDKVYA---------------------- 142 (211)
T ss_dssp EEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGG--SSEEEE----------------------
T ss_pred cccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHH--cCeEEe----------------------
Confidence 4789999999999999 9999999999988888777762 266655 677777
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhh
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 313 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~ 313 (344)
+++++..||++++|..+++++|+++++|++|||+.+|+++|+++|+.+++++++....+
T Consensus 143 --~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~~~~~~ 201 (211)
T 2i6x_A 143 --SCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNGENWIP 201 (211)
T ss_dssp --HHHHTCCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCCHH
T ss_pred --ecccCCCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCHHHHHH
Confidence 77788899999999999999999999999999999999999999999999887755433
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=185.05 Aligned_cols=111 Identities=18% Similarity=0.264 Sum_probs=96.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHH------HHhhccchhcccceeecccchhhhhccCCcCCcccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCL------ENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l------~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
..++||+.++|+.|+++ ++++|+||+.....+.++ +.+ ++..+ |+.+++
T Consensus 111 ~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~-~l~~~--fd~i~~--------------------- 165 (229)
T 4dcc_A 111 VDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTF-KVEDY--FEKTYL--------------------- 165 (229)
T ss_dssp CCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTB-CHHHH--CSEEEE---------------------
T ss_pred HhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccC-CHHHh--CCEEEe---------------------
Confidence 35789999999999999 999999999998887665 443 55555 688877
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK 316 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~ 316 (344)
+++++.+||+|++|+.+++++|++|++|++|||+.+|+++|+++|+.+++++++....+.|.
T Consensus 166 ---~~~~~~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~~k~~L~ 227 (229)
T 4dcc_A 166 ---SYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGEDWSHLFR 227 (229)
T ss_dssp ---HHHHTCCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCCGGGGGC
T ss_pred ---ecccCCCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHHHHHHhh
Confidence 78888999999999999999999999999999999999999999999999998877655543
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=178.62 Aligned_cols=134 Identities=22% Similarity=0.374 Sum_probs=112.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++||+.++|+.|+++|++++|+||+.. ..+...++.+ ++..+ |+.+++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------ 85 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNF-GIIDY--FDFIYA------------------------ 85 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHT-TCGGG--EEEEEE------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhc-Cchhh--eEEEEE------------------------
Confidence 68999999999999999999999999987 7788889887 77776 688887
Q ss_pred CCCC----CCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCch--hhhcc--ccccccC--
Q 019226 255 GDDV----KQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTA--EQDFK--DAIAIYP-- 323 (344)
Q Consensus 255 ~~~~----~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~--~~~l~--~~~~~~~-- 323 (344)
+++. +..||+|++|+.+++++|++|++|+||||+ .+|+++|+++||.+|++.++... .+.+. .++++++
T Consensus 86 ~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~ 165 (189)
T 3ib6_A 86 SNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVW 165 (189)
T ss_dssp CCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEES
T ss_pred ccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccc
Confidence 7665 778999999999999999999999999999 69999999999999999887752 23333 5677787
Q ss_pred CccccCHHHHHHHHHHh
Q 019226 324 DLSNVRLKDLELLLQNV 340 (344)
Q Consensus 324 ~~~~~~~~~l~~ll~~~ 340 (344)
++. ++.++.+++++-
T Consensus 166 ~l~--~l~~~l~l~~~~ 180 (189)
T 3ib6_A 166 DLA--DVPEALLLLKKI 180 (189)
T ss_dssp SGG--GHHHHHHHHHHH
T ss_pred cHH--hHHHHHHHHHHh
Confidence 554 346666666554
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=181.40 Aligned_cols=101 Identities=20% Similarity=0.304 Sum_probs=94.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+ |++++++||+....++..++.+ ++..+ |+.+++ +++
T Consensus 92 ~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~-gl~~~--f~~~~~------------------------~~~ 142 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVIS------------------------VDA 142 (253)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------GGG
T ss_pred CCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHC-Cchhh--ccEEEE------------------------ccc
Confidence 578999999999999 8999999999999899999886 77766 688887 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 307 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~ 307 (344)
++.+||++++|..+++++|+++++|++|||+.+|+++|+++|+.++++++
T Consensus 143 ~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 143 KRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp GTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 88899999999999999999999999999999999999999999999987
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-23 Score=181.31 Aligned_cols=113 Identities=21% Similarity=0.371 Sum_probs=96.7
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|+++|++++++||+.....+..++.+.++..+ |+.+++ ++
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~--f~~~~~------------------------~~ 142 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYL------------------------SQ 142 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEE------------------------HH
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhh--eeeEEE------------------------ec
Confidence 3678999999999999999999999999887666555552255555 677877 77
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+.+..||++++|..+++++|+++++|++|||+.+|+++|+++|+.+++++++....+.+
T Consensus 143 ~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~~~~~~l 201 (206)
T 2b0c_A 143 DLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDYF 201 (206)
T ss_dssp HHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCchHHHHH
Confidence 77889999999999999999999999999999999999999999999998876654443
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=176.09 Aligned_cols=131 Identities=24% Similarity=0.326 Sum_probs=102.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
.+++||+.++|+.|+++|++++|+||+.. ..++..++.+ + .+ ++.++.
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g--~~--~~~~~~------------ 88 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQM-G--GV--VDAIFM------------ 88 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHT-T--CC--CCEEEE------------
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhC-C--Cc--eeEEEE------------
Confidence 57999999999999999999999999986 4455556654 3 11 344332
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc----cc
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF----KD 317 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l----~~ 317 (344)
|.+. ++++...||+|++|+.+++++|++|++|+||||+.+|+++|+++||.+|++.++......+ ..
T Consensus 89 --------~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~ 160 (179)
T 3l8h_A 89 --------CPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160 (179)
T ss_dssp --------ECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCT
T ss_pred --------cCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCC
Confidence 1111 4677889999999999999999999999999999999999999999999999988765554 34
Q ss_pred cccccCCccccCHHHHHHHHH
Q 019226 318 AIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~ll~ 338 (344)
+++++++ +.+|.+++.
T Consensus 161 ~d~v~~~-----l~el~~~l~ 176 (179)
T 3l8h_A 161 GTRVCED-----LAAVAEQLL 176 (179)
T ss_dssp TEEEESS-----HHHHHHHHH
T ss_pred CcEEecC-----HHHHHHHHH
Confidence 5566555 455555553
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=172.64 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=88.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||.....+.... + .+ ++.+++ +++
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~----~--~~--~d~v~~------------------------~~~ 82 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA----A--PV--NDWMIA------------------------APR 82 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH----T--TT--TTTCEE------------------------CCC
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc----C--cc--CCEEEE------------------------CCc
Confidence 578999999999999999999999998876553222 2 22 578888 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC-CcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISE-KDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~-~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+..+||+|++|..+++++|+.+ ++|+||||+.+|+++|+++||.+|+|.++..
T Consensus 83 ~~~~KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~ 136 (196)
T 2oda_A 83 PTAGWPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGP 136 (196)
T ss_dssp CSSCTTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSST
T ss_pred CCCCCCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCc
Confidence 9899999999999999999975 8999999999999999999999999988764
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=185.67 Aligned_cols=207 Identities=14% Similarity=0.150 Sum_probs=137.5
Q ss_pred CCccEEEEecCccccccchhHHHH--HHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQA--YNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
|++|+|+||+||||+++...+..+ +.+.+.+.|++.... ....|.....+...+...|++..
T Consensus 1 M~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~~---------------t~~~g~~~~~~~~~~~~~g~~~~- 64 (250)
T 2c4n_A 1 MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLL---------------TNYPSQTGQDLANRFATAGVDVP- 64 (250)
T ss_dssp CCCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEEE---------------ESCCSCCHHHHHHHHHHTTCCCC-
T ss_pred CCccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEEE---------------ECCCCCCHHHHHHHHHHcCCCCC-
Confidence 358999999999999998666555 556666778764321 11225555556666666655321
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEE-----------------------
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVA----------------------- 199 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~----------------------- 199 (344)
........... ..+.+.+ .....+++|+.++++.+++.|++++
T Consensus 65 --------~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 2c4n_A 65 --------DSVFYTSAMAT-----ADFLRRQ-EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKA 130 (250)
T ss_dssp --------GGGEEEHHHHH-----HHHHHTS-SCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHH
T ss_pred --------HHHeEcHHHHH-----HHHHHhc-CCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHH
Confidence 00000000001 1111111 1345788999999999999999998
Q ss_pred ----------EEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHH
Q 019226 200 ----------VCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYV 269 (344)
Q Consensus 200 ----------ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~ 269 (344)
++||.. ......++.+..+..+ ++.+.. .+.+..+||++.+|+
T Consensus 131 ~~~~~~~~~~i~t~~~-~~~~~~~~~~~~~~~~--~~~~~~------------------------~~~~~~~kpk~~~~~ 183 (250)
T 2c4n_A 131 AYFVANGARFIATNPD-THGRGFYPACGALCAG--IEKISG------------------------RKPFYVGKPSPWIIR 183 (250)
T ss_dssp HHHHHTTCEEEESCCC-SBSSTTCBCHHHHHHH--HHHHHC------------------------CCCEECSTTSTHHHH
T ss_pred HHHHHCCCEEEEECCC-CCCCCeeecchHHHHH--HHHHhC------------------------CCceEeCCCCHHHHH
Confidence 777765 3222222222102221 233333 566778999999999
Q ss_pred HHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhc----cccccccCCcccc
Q 019226 270 TAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDF----KDAIAIYPDLSNV 328 (344)
Q Consensus 270 ~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l----~~~~~~~~~~~~~ 328 (344)
.+++++|+++++|++|||+ .||++|++.+|+.+++|.++....+.+ ..++++++++.++
T Consensus 184 ~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 184 AALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp HHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred HHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 9999999999999999999 699999999999999999887765555 3578888887765
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-22 Score=175.04 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=98.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.++. ..+|.+ ....+++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~-gl~~~--f~~~~~-------~~~~~~-------~~~~~~~ 136 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLL-HLDAA--FSNTLI-------VENDAL-------NGLVTGH 136 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEE-------EETTEE-------EEEEEES
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHc-Ccchh--ccceeE-------EeCCEE-------EeeeccC
Confidence 689999999999999999999999999999999999987 76665 455543 111110 0001445
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
+..+||++++|+.+++++|+++++|++|||+.+|+++|+++|+.+++ + +. ......+++++++
T Consensus 137 ~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~-~~--~~l~~~ad~v~~~ 199 (217)
T 3m1y_A 137 MMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-N-AK--EVLKQHATHCINE 199 (217)
T ss_dssp CCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-S-CC--HHHHTTCSEEECS
T ss_pred CCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-C-cc--HHHHHhcceeecc
Confidence 66789999999999999999999999999999999999999999877 2 22 2223456777654
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.87 E-value=5.2e-22 Score=174.03 Aligned_cols=131 Identities=15% Similarity=0.138 Sum_probs=95.2
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch--hcccceeecccchhhhhccCCcCCcccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
....++||+.++|+.|+++|++++|+||+....++..++.+ ++.. + |+.++.+ -.+|. +.
T Consensus 83 ~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~~~--f~~~~~~------~~~~~------~~--- 144 (225)
T 1nnl_A 83 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATNV--FANRLKF------YFNGE------YA--- 144 (225)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGGE--EEECEEE------CTTSC------EE---
T ss_pred ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHc-CCCcccE--EeeeEEE------cCCCc------Ee---
Confidence 34689999999999999999999999999999999999987 6652 3 3333210 00000 00
Q ss_pred CCCCCC----CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 254 QGDDVK----QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 254 ~~~~~~----~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
+.+.. ..||+|++|..+++++|+ ++|+||||+.+|+++|+++|+ +|++............+++++.++.++
T Consensus 145 -~~~~~~~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el 219 (225)
T 1nnl_A 145 -GFDETQPTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 219 (225)
T ss_dssp -EECTTSGGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred -cCCCCCcccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHH
Confidence 22222 246788999999999998 899999999999999999999 777754433222234567778777665
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=192.48 Aligned_cols=112 Identities=18% Similarity=0.245 Sum_probs=92.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCC--ChhhHHHHHHH-hhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA--TKSSVILCLEN-LIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~--~~~~~~~~l~~-l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++||+.++|+.|+++|++++|+||+ ........++. +.++..+ |+.+++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~--fd~i~~------------------------ 152 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH--FDFLIE------------------------ 152 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT--SSEEEE------------------------
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh--eeEEEe------------------------
Confidence 589999999999999999999999998 11112222222 1244555 788888
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++++..||+|++|..+++++|++|++|+||||+.+|+++|+++||.+|++.++....+.+
T Consensus 153 ~~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~~~~~~l 213 (555)
T 3i28_A 153 SCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKEL 213 (555)
T ss_dssp HHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCccHHHHH
Confidence 8999999999999999999999999999999999999999999999999998776654444
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-22 Score=173.94 Aligned_cols=202 Identities=12% Similarity=0.153 Sum_probs=131.6
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
.++|+|+||+||||+|+...+..++.+++.++|++..... ......+....|.. .....+..++...
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~-------~~~~~~~~~~~g~~--~~~~~~~~~~~~~---- 75 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARY-------WEIFETLRTELGYA--DYLGALQRYRLEQ---- 75 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHH-------HHHHHHHHHHC-CC--CHHHHHHHHHHHC----
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHH-------HHHHHHHHHhcCch--HHHHHHHHHHhcc----
Confidence 4688999999999999999999999999999987532100 00122333333322 1111121111000
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.. +.. .+.+.+.|.... ....++||+.++|+.|+++| +++|+||+....++..++.+ ++..+
T Consensus 76 ---~~-~~~--------~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~-gl~~~-- 137 (231)
T 2p11_A 76 ---PR-DTR--------LLLMSSFLIDYP--FASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARS-GLWDE-- 137 (231)
T ss_dssp ---TT-CTG--------GGGGHHHHHHCC--GGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHT-THHHH--
T ss_pred ---cc-chH--------HHHHHHHHHHHH--HhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHc-CcHHh--
Confidence 00 000 011112222221 23689999999999999999 99999999999999999987 66655
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh---hHHHHHHcCCe
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI---GLQAATRAGMA 301 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~---Di~~a~~aG~~ 301 (344)
|+.++. + .++++.++..+++ |++|++|+||||+.+ |+.+|+++||.
T Consensus 138 f~~~~~---------------------------~--~~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~ 186 (231)
T 2p11_A 138 VEGRVL---------------------------I--YIHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLT 186 (231)
T ss_dssp TTTCEE---------------------------E--ESSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEE
T ss_pred cCeeEE---------------------------e--cCChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCe
Confidence 343332 1 2344677777776 799999999999999 99999999999
Q ss_pred EEEEeCCCc--hhhhcc---ccccccCCcccc
Q 019226 302 CVITYTSST--AEQDFK---DAIAIYPDLSNV 328 (344)
Q Consensus 302 ~v~v~~~~~--~~~~l~---~~~~~~~~~~~~ 328 (344)
+|++.++.. ..+.+. .+++++.++.++
T Consensus 187 ~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el 218 (231)
T 2p11_A 187 TVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218 (231)
T ss_dssp EEEECCSSSSSCHHHHHHSCCCSEEESSGGGG
T ss_pred EEEeCCCCCCCcchhccccCCCceeecCHHHH
Confidence 999988742 222332 256677766554
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-22 Score=180.44 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=96.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh--HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
..++||+.++++.|+ +|+++ ++||.+... ....+....++..+ |+.+++ +
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~--f~~~~~------------------------~ 176 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTF--VETATQ------------------------T 176 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHH--HHHHHT------------------------C
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHH--HHHHhC------------------------C
Confidence 467899999999997 89997 899987632 11111111223333 466666 6
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccccC
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR 329 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~ 329 (344)
++.+.+||+|++|+.+++++|++|++|+||||++ +|+.+|+++|+.+|+|.++....+.+. .++++++++.++.
T Consensus 177 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~ 255 (264)
T 1yv9_A 177 KPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 255 (264)
T ss_dssp CCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred CccccCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHh
Confidence 7778899999999999999999999999999994 999999999999999998877654443 4788888887764
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-22 Score=179.34 Aligned_cols=130 Identities=12% Similarity=0.102 Sum_probs=93.3
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc---eeecccchhhhhccCCcCCccccccccCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD---CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
++|++.++++.|+ +|+++ ++||.+.......+... ++..+ ++ .++. ++
T Consensus 123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~------------------------~~ 173 (259)
T 2ho4_A 123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLAL-GPGPF--VTALEYATD------------------------TK 173 (259)
T ss_dssp BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEE-CSHHH--HHHHHHHHT------------------------CC
T ss_pred CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCccc-CCcHH--HHHHHHHhC------------------------CC
Confidence 6789999999999 89999 99998765443333332 44333 23 3333 67
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
++..+||+|++|..+++++|+++++|++|||+. +|++||+++|+.+|++.++......... ....|++..-++.+|.+
T Consensus 174 ~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~-~~~~~~~~~~~l~~l~~ 252 (259)
T 2ho4_A 174 AMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEK-INPPPYLTCESFPHAVD 252 (259)
T ss_dssp CEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGG-SSSCCSEEESCHHHHHH
T ss_pred ceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccc-cCCCCCEEECCHHHHHH
Confidence 778899999999999999999999999999999 9999999999999999887432222110 01123333335556666
Q ss_pred HHHH
Q 019226 336 LLQN 339 (344)
Q Consensus 336 ll~~ 339 (344)
++.+
T Consensus 253 ~l~~ 256 (259)
T 2ho4_A 253 HILQ 256 (259)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.3e-21 Score=176.68 Aligned_cols=110 Identities=17% Similarity=0.195 Sum_probs=90.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++..++.+ ++..+ ++..+. +.+|.+. .....+
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~l-gl~~~--f~~~l~-------~~dg~~t-------g~i~~~ 240 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARY-QLDYA--FSNTVE-------IRDNVLT-------DNITLP 240 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEECEE-------EETTEEE-------EEECSS
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHc-CCCeE--EEEEEE-------eeCCeee-------eeEecc
Confidence 689999999999999999999999999999999999997 76655 344433 1222110 000344
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..+||++++|..+++++|+++++|+||||+.+|+.+|+++|+.+++
T Consensus 241 ~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 241 IMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred cCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 55679999999999999999999999999999999999999998876
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-21 Score=165.48 Aligned_cols=140 Identities=21% Similarity=0.256 Sum_probs=102.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
..++||+.++|+.|+++|++++|+||+.. ..++..++.+ ++. |+.++.. +. ..+|.
T Consensus 49 ~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----f~~~~~~-~~---~~~~~ 119 (211)
T 2gmw_A 49 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADR-DVD----LDGIYYC-PH---HPQGS 119 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEE-CC---BTTCS
T ss_pred CcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHc-CCc----eEEEEEC-Cc---CCCCc
Confidence 57899999999999999999999999983 5677777775 544 3443320 00 00000
Q ss_pred cCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhhc-ccccc
Q 019226 243 LMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAIA 320 (344)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~l-~~~~~ 320 (344)
. ...++++..+||++++|+.+++++|+++++|+||||+.+|+++|+++|+.+ +++.++....+.. ..+++
T Consensus 120 -~-------~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~ 191 (211)
T 2gmw_A 120 -V-------EEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADW 191 (211)
T ss_dssp -S-------GGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSE
T ss_pred -c-------cccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCE
Confidence 0 001456778999999999999999999999999999999999999999999 9998876543322 23566
Q ss_pred ccCCccccCHHHHHHHHHH
Q 019226 321 IYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 321 ~~~~~~~~~~~~l~~ll~~ 339 (344)
++.++ .+|.+++.+
T Consensus 192 vi~~l-----~el~~~l~~ 205 (211)
T 2gmw_A 192 VLNSL-----ADLPQAIKK 205 (211)
T ss_dssp EESCG-----GGHHHHHHC
T ss_pred EeCCH-----HHHHHHHHh
Confidence 66654 445555544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-21 Score=155.21 Aligned_cols=108 Identities=21% Similarity=0.318 Sum_probs=95.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+++ +++.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~-~l~~~--f~~i~~------------------------~~~~ 70 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIREL-ETNGV--VDKVLL------------------------SGEL 70 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHH-HHTTS--SSEEEE------------------------HHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHC-ChHhh--ccEEEE------------------------eccC
Confidence 35678889999999999999999999988888888886 66665 688877 7777
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhh
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQ 313 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~ 313 (344)
+..||++++|+.+++++|+++++|+||||+.+|+++|+++|+.++++.++....+
T Consensus 71 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~~~~~~ 125 (137)
T 2pr7_A 71 GVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDRAVV 125 (137)
T ss_dssp SCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCChHHHHH
Confidence 8899999999999999999999999999999999999999999999877655443
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.6e-20 Score=158.80 Aligned_cols=131 Identities=12% Similarity=0.113 Sum_probs=98.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhccc-ceeecccchhhhhccCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGL-DCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
...++||+.++|+.|+++ ++++|+||+....++..++.+ ++..+ | +.++. +
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~-gl~~~--f~~~~~~------------------------~ 118 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQL-GFPTL--LCHKLEI------------------------D 118 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHT-TCCCE--EEEEEEE------------------------C
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHc-CCcce--ecceeEE------------------------c
Confidence 468999999999999999 999999999999899999886 66654 4 34444 4
Q ss_pred CCCCC---CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcc-ccCHH
Q 019226 256 DDVKQ---KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLS-NVRLK 331 (344)
Q Consensus 256 ~~~~~---~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~-~~~~~ 331 (344)
++... .||+|..|..+++++++.+++|+||||+.+|+++|+++|+.+++ + +. ..+.. ..++.. .-++.
T Consensus 119 ~~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~-~~---~~~~~---~~~~~~~~~~~~ 190 (206)
T 1rku_A 119 DSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-H-AP---ENVIR---EFPQFPAVHTYE 190 (206)
T ss_dssp TTSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-S-CC---HHHHH---HCTTSCEECSHH
T ss_pred CCceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-C-Cc---HHHHH---HHhhhccccchH
Confidence 44421 25888999999999999999999999999999999999998664 2 21 11211 112221 23567
Q ss_pred HHHHHHHHhhhc
Q 019226 332 DLELLLQNVVAA 343 (344)
Q Consensus 332 ~l~~ll~~~~~~ 343 (344)
+|.+++++....
T Consensus 191 ~l~~~l~~~~~~ 202 (206)
T 1rku_A 191 DLKREFLKASSR 202 (206)
T ss_dssp HHHHHHHHHCSS
T ss_pred HHHHHHHHHhcc
Confidence 777887776543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-20 Score=160.49 Aligned_cols=123 Identities=14% Similarity=0.162 Sum_probs=88.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch--hcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER--FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
..++||+.++++.|+++|++++++||+....++..++.+ ++.. +...+.++. .
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------------~ 135 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYL-NIPRENIFAVETIWN------------------------S 135 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCCGGGEEEEEEEEC------------------------T
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHc-CCCcccEEEeeeeec------------------------C
Confidence 468999999999999999999999999999999999887 6532 211112222 1
Q ss_pred CC----CCCCCCCHHHHHHHH-HHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh--hhccccccccCCcc
Q 019226 256 DD----VKQKKPDPSIYVTAA-KRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLS 326 (344)
Q Consensus 256 ~~----~~~~KP~~~~~~~~~-~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~--~~l~~~~~~~~~~~ 326 (344)
+. ....||++..+...+ +.+|+++++|++|||+.+|++|+ ++|+.++++..+.... .....++++++++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~ 212 (219)
T 3kd3_A 136 DGSFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVA 212 (219)
T ss_dssp TSBEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHH
T ss_pred CCceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHH
Confidence 11 244677766555555 55699999999999999999998 6899987776554432 22234666665543
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=158.69 Aligned_cols=109 Identities=10% Similarity=0.010 Sum_probs=84.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.++|+.|+++|++++|+||+....++.+++.+ ++..+. ...+. ..+|.+. + ......
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~-g~~~~~--~~~~~-------~~~~~~~------g-~~~~~~ 154 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAF-GVQHLI--ATDPE-------YRDGRYT------G-RIEGTP 154 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCCEEE--ECEEE-------EETTEEE------E-EEESSC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCEEE--EcceE-------EECCEEe------e-eecCCC
Confidence 57999999999999999999999999999999999987 665432 22111 1121100 0 001233
Q ss_pred CCCCCCHHHHHHHHHHcC---CCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLG---ISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lg---v~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
..+++++..+..+++++| +++++|++|||+.+|+.+++.+|+.+++
T Consensus 155 ~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~ 203 (232)
T 3fvv_A 155 SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAA 203 (232)
T ss_dssp SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEE
T ss_pred CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEE
Confidence 346788899999999999 9999999999999999999999999765
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=165.17 Aligned_cols=132 Identities=23% Similarity=0.399 Sum_probs=107.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc--eeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
..++||+.++|+.|+++|++++|+||+....++..++.+ ++..+ |+ .+++ +
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~l-gL~~~--Fd~~~Ivs------------------------~ 266 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPY--FEADFIAT------------------------A 266 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGG--SCGGGEEC------------------------H
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHc-CChHh--cCCCEEEe------------------------c
Confidence 468899999999999999999999999999999999987 77776 56 6666 5
Q ss_pred CCCC-----------CCCCCHHHHHHHHHHcC--------------CCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 256 DDVK-----------QKKPDPSIYVTAAKRLG--------------ISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 256 ~~~~-----------~~KP~~~~~~~~~~~lg--------------v~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+++. .+||+|++|..+++++| ++|++|+||||+.+|+++|+++||.+|++.++..
T Consensus 267 ddv~~~~~~~~~~kp~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~ 346 (384)
T 1qyi_A 267 SDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLK 346 (384)
T ss_dssp HHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTT
T ss_pred ccccccccccccccCCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCcc
Confidence 5543 48999999999999999 8999999999999999999999999999988753
Q ss_pred h---hhhc--cccccccCCccccCHHHHHHHHHHhh
Q 019226 311 A---EQDF--KDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 311 ~---~~~l--~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
. .+.+ ..++++++++. +|..++.+.+
T Consensus 347 ~~~~~~~l~~~~ad~vi~sl~-----eL~~~l~~~~ 377 (384)
T 1qyi_A 347 GKDAAGELEAHHADYVINHLG-----ELRGVLDNLL 377 (384)
T ss_dssp BGGGHHHHHHTTCSEEESSGG-----GHHHHHSCTT
T ss_pred ccccHHHHhhcCCCEEECCHH-----HHHHHHHHHH
Confidence 1 2233 24566666654 4555655443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.5e-20 Score=175.00 Aligned_cols=110 Identities=17% Similarity=0.226 Sum_probs=89.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.++||+.++|+.|+++|++++|+||+....++..++.+ ++..+ ++..+. +.+|.+ +....++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~-------~~dg~~-------tg~~~~~ 317 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEEL-MLDYV--AANELE-------IVDGTL-------TGRVVGP 317 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCSEE--EEECEE-------EETTEE-------EEEECSS
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-Cccce--eeeeEE-------EeCCEE-------EeeEccC
Confidence 589999999999999999999999999999999999997 76654 232221 112211 1111456
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+..+||++++|..+++++|+++++|++|||+.+|+.|++++|+.+++
T Consensus 318 v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 318 IIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp CCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred CCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 66789999999999999999999999999999999999999999876
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=158.76 Aligned_cols=142 Identities=25% Similarity=0.334 Sum_probs=103.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh---------------hhHHHHHHHhhccchhcccceee-cccchhhhhccC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK---------------SSVILCLENLIGMERFEGLDCFL-ADCQSYVLMTNG 241 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~---------------~~~~~~l~~l~~~~~~~~~d~~~-~~~~~~~~~~~~ 241 (344)
..++||+.++|+.|+++|++++++||+.. ..++..++.+ ++. ++.++ +.. ..+|
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----~~~~~~~~~-----~~~g 124 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE-GVF----VDMVLACAY-----HEAG 124 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHT-TCC----CSEEEEECC-----CTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHc-CCc----eeeEEEeec-----CCCC
Confidence 57899999999999999999999999987 5677777775 442 23322 200 0001
Q ss_pred CcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhhc-cccc
Q 019226 242 TLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAI 319 (344)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~l-~~~~ 319 (344)
.+. ...+++..+||++.+|+.+++++|+++++|+||||+.+|+++|+++|+.+ +++.++....+.. ..++
T Consensus 125 ~~~--------~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~ 196 (218)
T 2o2x_A 125 VGP--------LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196 (218)
T ss_dssp CST--------TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEE
T ss_pred cee--------ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCC
Confidence 110 11266778999999999999999999999999999999999999999999 9998877644332 2233
Q ss_pred cccCCccccCHHHHHHHHHHhhh
Q 019226 320 AIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 320 ~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
++++ ++.+|.+++.++..
T Consensus 197 ~~i~-----~l~el~~~l~~~~~ 214 (218)
T 2o2x_A 197 RDSS-----ELGDLLAAIETLGR 214 (218)
T ss_dssp SSHH-----HHHHHHHHHHHTCC
T ss_pred Eecc-----cHHHHHHHHHHHhc
Confidence 3333 45666677766543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-20 Score=166.53 Aligned_cols=125 Identities=12% Similarity=0.195 Sum_probs=90.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH---HHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL---CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~---~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
.+++++.++++.| ..|+++ ++||........ .++.. ++..+ ++.++. .
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~~~~-~l~~~--~~~~~~------------------------~ 187 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVPDAG-SIMAA--IEASTG------------------------R 187 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEECHH-HHHHH--HHHHHS------------------------C
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCcccccc-HHHHH--HHHHhC------------------------C
Confidence 4678899999999 788988 889876532211 11111 22222 344444 6
Q ss_pred CC-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccccC
Q 019226 256 DD-VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR 329 (344)
Q Consensus 256 ~~-~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~ 329 (344)
++ +..+||++.+|+.+++++|+++++|++|||+. +|++||+.+|+.+++|.++....+.+. .++++++ +
T Consensus 188 ~~~~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~-----~ 262 (271)
T 1vjr_A 188 KPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFK-----N 262 (271)
T ss_dssp CCSEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEES-----S
T ss_pred CCcccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEEC-----C
Confidence 66 78899999999999999999999999999995 999999999999999998876654443 3444444 4
Q ss_pred HHHHHHHH
Q 019226 330 LKDLELLL 337 (344)
Q Consensus 330 ~~~l~~ll 337 (344)
+.+|.+++
T Consensus 263 l~el~~~l 270 (271)
T 1vjr_A 263 LGELAKAV 270 (271)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 45555544
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.7e-19 Score=152.56 Aligned_cols=126 Identities=22% Similarity=0.229 Sum_probs=87.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++|++.++|+.|+++|++++++|+.....++..++.+ ++..+ ++..+. +.++.+.. . . ..+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-~~~~~--~~~~~~-------~~~~~~~~-~-~-----~~~ 137 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLI-------VKDGKLTG-D-V-----EGE 137 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEE-------EETTEEEE-E-E-----ECS
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc-CCCeE--EEeeeE-------EECCEEcC-C-c-----ccC
Confidence 467899999999999999999999998887777777775 54432 222211 00110000 0 0 112
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
...+++++..+..+++++|+++++|++|||+.+|++|++.||+.++ +. +. ......+++++.+
T Consensus 138 ~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~-~~--~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 138 VLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FC-AK--PILKEKADICIEK 200 (211)
T ss_dssp SCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ES-CC--HHHHTTCSEEECS
T ss_pred ccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-EC-CC--HHHHhhcceeecc
Confidence 2235677899999999999999999999999999999999999854 33 21 2223446777765
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-20 Score=155.27 Aligned_cols=108 Identities=18% Similarity=0.318 Sum_probs=86.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCC---------------ChhhHHHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAA---------------TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~---------------~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
..++||+.++|+.|+++|++++|+||+ ....++..++.+ ++. |+.++.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~-gl~----fd~v~~------------ 103 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQ----FDEVLI------------ 103 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHT-TCC----EEEEEE------------
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHc-CCC----eeEEEE------------
Confidence 579999999999999999999999998 456677777776 543 455543
Q ss_pred cCCcccccccc-CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 243 LMPNRVCVCAH-QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
|++ ..++++..||+|++|+.+++++|++|++|+||||+.+|+++|+++||.+|++.++..
T Consensus 104 --------s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~~ 164 (176)
T 2fpr_A 104 --------CPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETL 164 (176)
T ss_dssp --------ECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTB
T ss_pred --------cCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCcc
Confidence 000 026778899999999999999999999999999999999999999999999987754
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-19 Score=165.07 Aligned_cols=142 Identities=18% Similarity=0.177 Sum_probs=104.2
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++++.|+++|++++++||+....++..++.+ ++..+ ++..+. +.+|.+ +....+
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~l-gl~~~--~~~~l~-------~~d~~~-------tg~~~~ 238 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQL-SLDYA--QSNTLE-------IVSGKL-------TGQVLG 238 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEE-------EETTEE-------EEEEES
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHc-CCCeE--EeeeeE-------eeCCee-------eeeecc
Confidence 3679999999999999999999999999999999999887 66554 233222 111111 000134
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
++..+||++++|..+++++|+++++|++|||+.+|+.|++++|+.+++ + +.. .....++.++ . ..++.++.++
T Consensus 239 ~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~-~~~--~~~~~a~~v~-~--~~~l~~v~~~ 311 (335)
T 3n28_A 239 EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-H-AKP--KVEAKAQTAV-R--FAGLGGVVCI 311 (335)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CCH--HHHTTSSEEE-S--SSCTHHHHHH
T ss_pred cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-C-CCH--HHHhhCCEEE-e--cCCHHHHHHH
Confidence 666789999999999999999999999999999999999999999877 2 222 2223344444 2 2345677777
Q ss_pred HHHhhh
Q 019226 337 LQNVVA 342 (344)
Q Consensus 337 l~~~~~ 342 (344)
|+..+.
T Consensus 312 L~~~l~ 317 (335)
T 3n28_A 312 LSAALV 317 (335)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 766553
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=160.61 Aligned_cols=96 Identities=16% Similarity=0.107 Sum_probs=79.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++|+||+....++..++ ++..+ +.+++ +++
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~---~l~~~---~~v~~------------------------~~~ 125 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE---GIVEK---DRIYC------------------------NHA 125 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT---TTSCG---GGEEE------------------------EEE
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh---cCCCC---CeEEe------------------------eee
Confidence 6899999999999999999999999999888877776 33222 55555 333
Q ss_pred CC--------CCCCCHHH-HH-------HHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VK--------QKKPDPSI-YV-------TAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~--------~~KP~~~~-~~-------~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
.. ..||+|.+ +. .+++++++++++|+||||+.+|+.+|+++|+.++
T Consensus 126 ~~~~~~~~~~~~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~ 187 (236)
T 2fea_A 126 SFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187 (236)
T ss_dssp ECSSSBCEEECTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred EEcCCceEEecCCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeee
Confidence 22 27898884 54 8899999999999999999999999999999986
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=163.51 Aligned_cols=121 Identities=12% Similarity=0.128 Sum_probs=93.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhH--HHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--ILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~--~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
..++|++.++++.|+ +|+++ ++||.+.... ...+...+++..+ |+.++. +
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~--~~~~~~------------------------~ 180 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAA--LKVATN------------------------V 180 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHH--HHHHHC------------------------C
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHH--HHHHhC------------------------C
Confidence 467899999999999 89998 9999887533 2222221233333 466666 7
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCcccc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNV 328 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~ 328 (344)
+++..+||+|.+|+.++++ ++|++|+||||+. +|+.+|+++||.+++|.++....+.+. .++++++++.++
T Consensus 181 ~~~~~~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el 256 (263)
T 1zjj_A 181 EPIIIGKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYEL 256 (263)
T ss_dssp CCEECSTTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGG
T ss_pred CccEecCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHH
Confidence 7777899999999999999 9999999999996 999999999999999998877555543 456666666554
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-18 Score=149.01 Aligned_cols=102 Identities=14% Similarity=0.174 Sum_probs=89.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC-hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT-KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~-~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
..++||+.++|+.|+++|++++++||+. ...++..++.+ ++..+ |+.++. .
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~-gl~~~--f~~~~~------------------------~- 118 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELF-DLFRY--FVHREI------------------------Y- 118 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHT-TCTTT--EEEEEE------------------------S-
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHc-CcHhh--cceeEE------------------------E-
Confidence 5789999999999999999999999998 68888888886 76665 455433 1
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.+|+++.|..+++++|+++++|+||||+.+|+++|+++|+.+|++.++...
T Consensus 119 ----~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 119 ----PGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp ----SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred ----eCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence 357899999999999999999999999999999999999999999887653
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-20 Score=160.41 Aligned_cols=160 Identities=16% Similarity=0.215 Sum_probs=112.5
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCC-CCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccccC
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVR-CDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIFD 145 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 145 (344)
.++|+|||||||+|+...+..++.+++. |++ .+.+....+. ....+... .+
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~~-------------------~~~~~~~~-~~------ 53 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGFL-------------------AREQYRAL-RP------ 53 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSSC-------------------HHHHHHHH-CT------
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHhh-------------------HHHHHHHH-hH------
Confidence 4799999999999999999999998877 654 2221111100 01111111 00
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 146 NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
+ +.+.+.+.|.+........++||+.++|+.|+++ |++++|+||+....++..++.+ ++
T Consensus 54 ------~--------~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-gl----- 113 (193)
T 2i7d_A 54 ------D--------LADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKY-RW----- 113 (193)
T ss_dssp ------T--------HHHHHHHHHTSTTTTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHH-HH-----
T ss_pred ------H--------HHHHHHHHHHhcCccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHh-Cc-----
Confidence 0 1111222232221113468999999999999999 9999999999988888888886 54
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-HcC
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-RAG 299 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~D----i~~a~-~aG 299 (344)
|+.+++ + .+++++|++|++|+||||+.+| +.+|+ ++|
T Consensus 114 f~~i~~------------------------~--------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG 155 (193)
T 2i7d_A 114 VEQHLG------------------------P--------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPS 155 (193)
T ss_dssp HHHHHC------------------------H--------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCS
T ss_pred hhhhcC------------------------H--------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccc
Confidence 355554 2 2788999999999999999998 99999 999
Q ss_pred CeEEEEeCCCchh
Q 019226 300 MACVITYTSSTAE 312 (344)
Q Consensus 300 ~~~v~v~~~~~~~ 312 (344)
|.+|++.++....
T Consensus 156 ~~~i~~~~~~~~~ 168 (193)
T 2i7d_A 156 WEHILFTCCHNRH 168 (193)
T ss_dssp SEEEEECCGGGTT
T ss_pred cceEEEEeccCcc
Confidence 9999998765543
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.7e-19 Score=161.62 Aligned_cols=80 Identities=19% Similarity=0.271 Sum_probs=62.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCch-hhhc---cccccccCCccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTA-EQDF---KDAIAIYPDLSNVR 329 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~-~~~l---~~~~~~~~~~~~~~ 329 (344)
.+.+..+||++.+|+.+++++|+++++|++|||+. ||++||+.+|+.+++|.++... .+.+ ..++++++ +
T Consensus 183 ~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~-----~ 257 (271)
T 2x4d_A 183 IKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVD-----N 257 (271)
T ss_dssp CCCEEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEES-----S
T ss_pred CceeeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeC-----C
Confidence 55677799999999999999999999999999998 9999999999999999887442 2222 12444554 4
Q ss_pred HHHHHHHHHH
Q 019226 330 LKDLELLLQN 339 (344)
Q Consensus 330 ~~~l~~ll~~ 339 (344)
+.+|.++|.+
T Consensus 258 ~~el~~~l~~ 267 (271)
T 2x4d_A 258 LAEAVDLLLQ 267 (271)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5556666554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.5e-20 Score=167.99 Aligned_cols=118 Identities=15% Similarity=0.228 Sum_probs=93.7
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhH--HH-H-HHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSV--IL-C-LENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~--~~-~-l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
...++++.|+++|++ +++||.+.... .. . ++. .++..+ |+.+++ ++++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~-~~l~~~--f~~~~~------------------------~~~~ 200 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAI-GGVATM--IESILG------------------------RRFI 200 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECH-HHHHHH--HHHHHC------------------------SCEE
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccC-ChHHHH--HHHHhC------------------------Ccee
Confidence 566677789999999 99999987644 21 1 223 244444 576766 7778
Q ss_pred CCCCCCHHHHHHHHHHc----CCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhcc--------ccccccCCc
Q 019226 259 KQKKPDPSIYVTAAKRL----GISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFK--------DAIAIYPDL 325 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~l----gv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~--------~~~~~~~~~ 325 (344)
..+||+|++|+.+++++ |++|++|+||||+. +|+.+|+++||.+|+|.++....+.+. .++++++++
T Consensus 201 ~~~KP~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l 280 (284)
T 2hx1_A 201 RFGKPDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESA 280 (284)
T ss_dssp EESTTSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCS
T ss_pred EecCCCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccch
Confidence 88999999999999999 99999999999996 999999999999999998876554442 467888887
Q ss_pred ccc
Q 019226 326 SNV 328 (344)
Q Consensus 326 ~~~ 328 (344)
.++
T Consensus 281 ~el 283 (284)
T 2hx1_A 281 VIE 283 (284)
T ss_dssp CCC
T ss_pred hhh
Confidence 764
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-20 Score=157.37 Aligned_cols=186 Identities=13% Similarity=0.128 Sum_probs=122.1
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
.++|+|+|||||||+|+...+.+++++++.+++ ..+.+. + .+. .....+... .
T Consensus 2 ~~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~~-~~~~~~-------------~---~~~---~~~~~~~~~--~----- 54 (197)
T 1q92_A 2 GRALRVLVDMDGVLADFEGGFLRKFRARFPDQP-FIALED-------------R---RGF---WVSEQYGRL--R----- 54 (197)
T ss_dssp CCCEEEEECSBTTTBCHHHHHHHHHHHHCTTSC-CCCGGG-------------C---CSS---CHHHHHHHH--S-----
T ss_pred CCceEEEEeCCCCCccCcHHHHHHHHHHHhcCC-CCCHHH-------------h---cCC---cHHHHHHhc--C-----
Confidence 357899999999999999999999999988762 221111 0 011 111112111 0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHc-CCeEEEEeCCChhhHHHHHHHhhccch-h
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVCSAATKSSVILCLENLIGMER-F 222 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~-g~~v~ivTn~~~~~~~~~l~~l~~~~~-~ 222 (344)
++... .+. +.|.+........++||+.++|+.|+++ |++++|+||+....++..++.+ ++.. +
T Consensus 55 ------~~~~~----~~~----~~~~~~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~-~l~~~~ 119 (197)
T 1q92_A 55 ------PGLSE----KAI----SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKY-AWVEKY 119 (197)
T ss_dssp ------TTHHH----HHH----HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHH-HHHHHH
T ss_pred ------HHHHH----HHH----HHHHhhhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHh-chHHHh
Confidence 11111 111 1222110113468999999999999999 9999999999988777778776 4433 3
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhh----HHHHH-H
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG----LQAAT-R 297 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~D----i~~a~-~ 297 (344)
+ . ..+++++|++|++|++|||+..| +++|+ +
T Consensus 120 f-------------------------------~-------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~ 155 (197)
T 1q92_A 120 F-------------------------------G-------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPT 155 (197)
T ss_dssp H-------------------------------C-------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSS
T ss_pred c-------------------------------h-------------HHHHHHhccCCccEEEECcccccCCchhhhcccC
Confidence 1 1 34667899999999999999998 99999 9
Q ss_pred cCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 298 AGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 298 aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+||.+|++.++......+......+.++. +++..+|+.+
T Consensus 156 aG~~~i~~~~~~~~~~~~~~~~~~v~~~~----~~l~~~l~~~ 194 (197)
T 1q92_A 156 PSWEHVLFTACHNQHLQLQPPRRRLHSWA----DDWKAILDSK 194 (197)
T ss_dssp CSSEEEEECCTTTTTCCCCTTCEEECCTT----SCHHHHHHTT
T ss_pred CCceEEEecCcccccccccccchhhhhHH----HHHHHHhccc
Confidence 99999999877654332222122344442 3566666644
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=6.4e-20 Score=168.92 Aligned_cols=124 Identities=11% Similarity=0.093 Sum_probs=94.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhH--H-HHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSV--I-LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~--~-~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|++.++++.|++.|+ ++++||.+.... . ..+...+.+..+ ++.++.
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~--~~~~~~------------------------ 207 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAA--VETASG------------------------ 207 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHH--HHHHHT------------------------
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHH--HHHHhC------------------------
Confidence 3567899999999999999 999999886533 1 112222112333 455555
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhc----------cccccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDF----------KDAIAIYP 323 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l----------~~~~~~~~ 323 (344)
++++..+||++.+|+.+++++|++|++|++|||+. +|++||+++|+.+++|.++....+.+ ..++++++
T Consensus 208 ~~~~~~~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~ 287 (306)
T 2oyc_A 208 RQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVE 287 (306)
T ss_dssp CCCEECSTTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEES
T ss_pred CCceeeCCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEEC
Confidence 67778899999999999999999999999999997 99999999999999999987654433 23566666
Q ss_pred Ccccc
Q 019226 324 DLSNV 328 (344)
Q Consensus 324 ~~~~~ 328 (344)
++.++
T Consensus 288 ~l~el 292 (306)
T 2oyc_A 288 SIADL 292 (306)
T ss_dssp SGGGG
T ss_pred CHHHH
Confidence 66554
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-19 Score=154.49 Aligned_cols=100 Identities=14% Similarity=0.113 Sum_probs=80.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC-C-
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG-D- 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 256 (344)
.++||+.++|+.|+++|++++|+||+.....+..++.+ ..+ |+.++. + +
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l---~~~--f~~i~~------------------------~~~~ 138 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL---ADN--FHIPAT------------------------NMNP 138 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH---HHH--TTCCTT------------------------TBCC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---HHh--cCcccc------------------------ccch
Confidence 46789999999999999999999999876555555552 233 344422 1 1
Q ss_pred -CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 257 -DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 257 -~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
+....||+|++|..+++++|+ |+||||+.+|+++|+++||.+|++.++...
T Consensus 139 ~~~~~~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~~~ 190 (211)
T 2b82_A 139 VIFAGDKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASNS 190 (211)
T ss_dssp CEECCCCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTTC
T ss_pred hhhcCCCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCCCC
Confidence 244589999999999999998 999999999999999999999999887653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-19 Score=151.68 Aligned_cols=122 Identities=20% Similarity=0.160 Sum_probs=89.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++.. +.+ ++..+ ++.+.. .++
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~-~~~~~--~~~~~~------------------------~~~ 129 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KEL-GDEFM--ANRAIF------------------------EDG 129 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTT-SSEEE--EEEEEE------------------------ETT
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHc-Cchhh--eeeEEe------------------------eCC
Confidence 58999999999999999999999999988877777 665 66554 344333 111
Q ss_pred -CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 258 -VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 -~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
....+|.+..+..+++++ ++++|++|||+.+|++|++.+|+.++ +.++.. .+++++++ +.+|.++
T Consensus 130 ~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~-~~~~~~------~ad~v~~~-----~~el~~~ 195 (201)
T 4ap9_A 130 KFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIA-VGREIP------GADLLVKD-----LKELVDF 195 (201)
T ss_dssp EEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEE-ESSCCT------TCSEEESS-----HHHHHHH
T ss_pred ceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEE-ECCCCc------cccEEEcc-----HHHHHHH
Confidence 111456666677777777 89999999999999999999999854 433322 44555554 5667777
Q ss_pred HHHhh
Q 019226 337 LQNVV 341 (344)
Q Consensus 337 l~~~~ 341 (344)
++++.
T Consensus 196 l~~l~ 200 (201)
T 4ap9_A 196 IKNLK 200 (201)
T ss_dssp HHTCC
T ss_pred HHHhh
Confidence 77653
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=153.91 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=66.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR 329 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~ 329 (344)
.+....+||++.+|+.+++++|+++++|++|||+ .+|++||+++|+.+|+|.++....+.+. .++++++++.++-
T Consensus 175 ~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 175 IKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp CCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred CCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 5667789999999999999999999999999999 5999999999999999999887766664 5788888888764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-18 Score=144.82 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=87.5
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
+|+.|+++|++++|+||.....++..++.+ ++ + ++. + .||+++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gi------~-~~~------------------------~-----~~~k~~ 89 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKL-KI------P-VLH------------------------G-----IDRKDL 89 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHH-TC------C-EEE------------------------S-----CSCHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHc-CC------e-eEe------------------------C-----CCChHH
Confidence 899999999999999999999999999886 43 3 344 2 399999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 338 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~ 338 (344)
.+..+++++|+++++|++|||+.+|+++++++|+.+++.+ ........+++++.+..+-. +.++.+++.
T Consensus 90 ~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~---~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~ 159 (176)
T 3mmz_A 90 ALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVAS---AHDVVRGAARAVTTVPGGDGAIREIASWIL 159 (176)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---CCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECCC---hhHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999998866422 22233344667776644433 566666553
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.6e-18 Score=140.96 Aligned_cols=111 Identities=14% Similarity=0.084 Sum_probs=86.2
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
+|+.|+++|++++++||.....++..++.+ ++. .++. . .||+++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~------~~~~------------------------~-----~kpk~~ 82 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKL-KVD------YLFQ------------------------G-----VVDKLS 82 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHT-TCS------EEEC------------------------S-----CSCHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHc-CCC------Eeec------------------------c-----cCChHH
Confidence 789999999999999999999899888886 433 3333 1 399999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELL 336 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~l 336 (344)
+|..+++++|+++++|+||||+.+|+++++++|+.+++.+ ........+++++.+..... +.++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~~g~~~e~~~~ 150 (164)
T 3e8m_A 83 AAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPAS---APFYIRRLSTIFLEKRGGEGVFREFVEK 150 (164)
T ss_dssp HHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTT---SCHHHHTTCSSCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCC---hHHHHHHhCcEEeccCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999877533 22233344677777655443 4444433
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.71 E-value=5.3e-17 Score=146.00 Aligned_cols=74 Identities=24% Similarity=0.307 Sum_probs=60.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhccc----cccccCCcccc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSNV 328 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~~ 328 (344)
.+....+||++.+|+.+++++|+++++|++|||+ .+|++|++.+|+.+++++++....+.+.. ++++++++.++
T Consensus 176 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el 254 (266)
T 3pdw_A 176 VQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEW 254 (266)
T ss_dssp CCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGG
T ss_pred CCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHH
Confidence 5667789999999999999999999999999999 79999999999999999998877666643 77777777655
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-17 Score=148.98 Aligned_cols=221 Identities=9% Similarity=0.020 Sum_probs=128.8
Q ss_pred CCccEEEEecCccccccc------hhHH---HHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH
Q 019226 65 QSLQALIFDCDGVIIESE------HLHR---QAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE 135 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~------~~~~---~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (344)
+++|+|+||+||||+|+. ..+. +.+.+.+.+.|+... -..|+....+..++..
T Consensus 20 ~~~kliifDlDGTLlds~i~~~~~~~l~~~~~~l~~~~~~~g~~~~------------------~~tGr~~~~~~~~~~~ 81 (289)
T 3gyg_A 20 HPQYIVFCDFDETYFPHTIDEQKQQDIYELEDYLEQKSKDGELIIG------------------WVTGSSIESILDKMGR 81 (289)
T ss_dssp SCSEEEEEETBTTTBCSSCCHHHHHHHHHHHHHHHHHHHTTCEEEE------------------EECSSCHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCcCCCCCcchHHHHHHHHHHHHHHHhcCCcEEE------------------EEcCCCHHHHHHHHHh
Confidence 568999999999999964 1111 222223333444321 1346666667777777
Q ss_pred cCCCCcc--cc----------C-CCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHc-CCeEEEE
Q 019226 136 HGWPSST--IF----------D-NPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAA-GKKVAVC 201 (344)
Q Consensus 136 ~g~~~~~--~~----------~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~-g~~v~iv 201 (344)
.|++... ++ . ++.... + ..+...+. .. ..++++.++++.++++ |+++++.
T Consensus 82 ~g~~~~~~~~i~~~g~~i~~~~~ng~~~~-~-------------~~~~~~~~-~~-~~~~~v~e~l~~l~~~~g~~l~~~ 145 (289)
T 3gyg_A 82 GKFRYFPHFIASDLGTEITYFSEHNFGQQ-D-------------NKWNSRIN-EG-FSKEKVEKLVKQLHENHNILLNPQ 145 (289)
T ss_dssp TTCCBCCSEEEETTTTEEEECCSSSTTEE-C-------------HHHHHHHH-TT-CCHHHHHHHHHHHHHHSSCCCEEG
T ss_pred hccCCCCCeEeecCCceEEEEcCCCcEee-c-------------Cchhhhhc-cc-CCHHHHHHHHHHHHhhhCceeeec
Confidence 7764211 11 0 111100 0 01122222 22 5678999999999998 9999999
Q ss_pred eCC---------------------ChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCC
Q 019226 202 SAA---------------------TKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQ 260 (344)
Q Consensus 202 Tn~---------------------~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (344)
|+. ....+...++.. ++..+ +...-. . .-.|... ...+.+..
T Consensus 146 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~--~~~~~~--------~--~~~~~~~----~~~~~~~~ 208 (289)
T 3gyg_A 146 TQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEY-GVSVN--INRCNP--------L--AGDPEDS----YDVDFIPI 208 (289)
T ss_dssp GGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHH-TEEEE--EEECCG--------G--GTCCTTE----EEEEEEES
T ss_pred ccccccceEEEEEEeccccccchHHHHHHHHHHHHc-CCCEE--EEEccc--------c--ccCCCCc----eEEEEEeC
Confidence 876 233344444443 33222 111100 0 0000000 00344567
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
++|++..+..+++++|+++++|++|||+.||+.|++.+|+.+++ +....+....+++++.+..+ ..+.++++++
T Consensus 209 ~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~---~~~~~~~~~~a~~v~~~~~~---~gv~~~~~~~ 282 (289)
T 3gyg_A 209 GTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL---KNATQEAKNLHNLITDSEYS---KGITNTLKKL 282 (289)
T ss_dssp CCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC---TTCCHHHHHHCCCBCSSCHH---HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE---CCccHHHHHhCCEEcCCCCc---CHHHHHHHHH
Confidence 89999999999999999999999999999999999999977554 22233333446666665443 3466666655
Q ss_pred hh
Q 019226 341 VA 342 (344)
Q Consensus 341 ~~ 342 (344)
+.
T Consensus 283 ~~ 284 (289)
T 3gyg_A 283 IG 284 (289)
T ss_dssp TC
T ss_pred HH
Confidence 43
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.71 E-value=8.3e-18 Score=153.51 Aligned_cols=117 Identities=15% Similarity=0.132 Sum_probs=84.2
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||+....++..++.+ ++..+ |+.+
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-gl~~~--f~~i----------------------------- 209 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDLV--IAEV----------------------------- 209 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSC-----------------------------
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh-CCcee--eeec-----------------------------
Confidence 478999999999999999999999999999899888886 55443 1211
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+ |. .+..++++++.. ++|+||||+.+|+.+|+++|+... +..+ .......+++++.+ -++.+|.+++
T Consensus 210 ~----~~--~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~-~~~~--~~~~~~~ad~v~~~---~~~~~l~~~l 276 (287)
T 3a1c_A 210 L----PH--QKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIA-VGSG--SDVAVESGDIVLIR---DDLRDVVAAI 276 (287)
T ss_dssp C----TT--CHHHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEE-ECCC--SCCSSCCSSEEESS---SCTHHHHHHH
T ss_pred C----hH--HHHHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEE-eCCC--CHHHHhhCCEEEeC---CCHHHHHHHH
Confidence 1 11 227788999999 999999999999999999999843 4322 22223345555511 2345555555
Q ss_pred HH
Q 019226 338 QN 339 (344)
Q Consensus 338 ~~ 339 (344)
..
T Consensus 277 ~~ 278 (287)
T 3a1c_A 277 QL 278 (287)
T ss_dssp HT
T ss_pred HH
Confidence 43
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.8e-17 Score=137.65 Aligned_cols=119 Identities=13% Similarity=0.109 Sum_probs=92.7
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCC
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVK 259 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (344)
+.++..++|+.|+++|++++++||.....++..++.+ ++.. ++. +
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~l-gl~~------~~~------------------------~---- 80 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADL-GIKL------FFL------------------------G---- 80 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TCCE------EEE------------------------S----
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHc-CCce------eec------------------------C----
Confidence 3345568999999999999999999999899888886 5433 333 2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHH-HHHHHH
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK-DLELLL 337 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~ll 337 (344)
.||++..++.+++++|+++++|++|||+.+|+++++++|+.+++.+ ........+++++.+..+..+- ++.+.+
T Consensus 81 -~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~~g~~~~~~~~~ 155 (180)
T 1k1e_A 81 -KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVAD---APIYVKNAVDHVLSTHGGKGAFREMSDMI 155 (180)
T ss_dssp -CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCC---ccHHHHhhCCEEecCCCCCcHHHHHHHHH
Confidence 4899999999999999999999999999999999999999987532 2222334577888887666544 554443
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.5e-18 Score=152.82 Aligned_cols=115 Identities=17% Similarity=0.227 Sum_probs=79.9
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.++||+.++|+.|+++|++++++||.....++..++.+ ++..+ ++.++. ++..
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~~------------------------~~k~ 196 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEEL-GLDDY--FAEVLP------------------------HEKA 196 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSEE--ECSCCG------------------------GGHH
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CChhH--hHhcCH------------------------HHHH
Confidence 68899999999999999999999999999999999887 66655 455544 3322
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
...||.++ .+ +|++|||+.||++|+++||+.+++ ++.....+..++.++.. -++.++.++++
T Consensus 197 ~~~k~~~~-------~~-----~~~~vGD~~nDi~~~~~Ag~~va~---~~~~~~~~~~a~~~~~~---~~~~~l~~~l~ 258 (280)
T 3skx_A 197 EKVKEVQQ-------KY-----VTAMVGDGVNDAPALAQADVGIAI---GAGTDVAVETADIVLVR---NDPRDVAAIVE 258 (280)
T ss_dssp HHHHHHHT-------TS-----CEEEEECTTTTHHHHHHSSEEEEC---SCCSSSCCCSSSEECSS---CCTHHHHHHHH
T ss_pred HHHHHHHh-------cC-----CEEEEeCCchhHHHHHhCCceEEe---cCCcHHHHhhCCEEEeC---CCHHHHHHHHH
Confidence 22333332 22 889999999999999999986554 33333334444544421 24455666554
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.5e-17 Score=135.06 Aligned_cols=113 Identities=17% Similarity=0.179 Sum_probs=89.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|+..++|+.|+++|++++++||+....++..++.+ ++. .++. +
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~-gl~------~~~~------------------------~--- 81 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKEL-GVE------EIYT------------------------G--- 81 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHT-TCC------EEEE------------------------C---
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc-CCH------hhcc------------------------C---
Confidence 34566789999999999999999999998888888886 433 3333 2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 330 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (344)
+||+++.|..+++++|+++++|+||||+.+|+++|+++|+.+++.+ +. ......+++++.++.+..+
T Consensus 82 --~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~~-~~--~~~~~~a~~v~~~~~~~g~ 148 (162)
T 2p9j_A 82 --SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRN-AV--EEVRKVAVYITQRNGGEGA 148 (162)
T ss_dssp --C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTT-SC--HHHHHHCSEECSSCSSSSH
T ss_pred --CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEecC-cc--HHHHhhCCEEecCCCCCcH
Confidence 6999999999999999999999999999999999999999977542 22 2223357888888877543
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-17 Score=144.77 Aligned_cols=113 Identities=11% Similarity=0.095 Sum_probs=89.0
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
+|+.|+++|++++|+||.....++..++.+ ++. .++. + .||+++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~l-gi~------~~f~------------------------~-----~k~K~~ 127 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTL-GIT------HLYQ------------------------G-----QSDKLV 127 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCC------EEEC------------------------S-----CSSHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCc------hhhc------------------------c-----cCChHH
Confidence 899999999999999999999999999886 543 3333 2 289999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 338 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~ 338 (344)
.++.+++++|+++++|++|||+.+|+++++++|+.+++.+ ........+++++.+..+.- +.++.+++-
T Consensus 128 ~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~---~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll 197 (211)
T 3ij5_A 128 AYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVAD---AHPLLLPKAHYVTRIKGGRGAVREVCDLIL 197 (211)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT---SCTTTGGGSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCC---ccHHHHhhCCEEEeCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999876532 22333455788887765443 455555543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.69 E-value=5.1e-17 Score=139.97 Aligned_cols=114 Identities=12% Similarity=0.158 Sum_probs=89.1
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.|+.|+++|++++|+||.....++..++.+ ++. .++. . .||++.
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~l-gi~------~~~~------------------------~-----~k~k~~ 103 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKAL-GIS------LIYQ------------------------G-----QDDKVQ 103 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHT-TCC------EEEC------------------------S-----CSSHHH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHc-CCc------EEee------------------------C-----CCCcHH
Confidence 588999999999999999999999999886 543 2333 1 399999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQN 339 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~~ 339 (344)
.+..+++++|+++++|++|||+.||+++++++|+.+++. .........+++++++..+.- +.++.+++-+
T Consensus 104 ~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~---na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~ 174 (195)
T 3n07_A 104 AYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA---DGHPLLAQRANYVTHIKGGHGAVREVCDLILQ 174 (195)
T ss_dssp HHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT---TSCHHHHHHCSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC---ChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999987642 222333445777777655444 4666665543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-17 Score=150.07 Aligned_cols=75 Identities=28% Similarity=0.370 Sum_probs=62.2
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecC-HhhHHHHHHcCCeEEEEeCCCchhhhcc--------ccccccCCcccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDS-VIGLQAATRAGMACVITYTSSTAEQDFK--------DAIAIYPDLSNV 328 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs-~~Di~~a~~aG~~~v~v~~~~~~~~~l~--------~~~~~~~~~~~~ 328 (344)
+..+||++.+|+.+++++|+++++|++|||+ .+|++||+++|+.+++|.++....+.+. .++++++
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~----- 257 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFN----- 257 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEES-----
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEEC-----
Confidence 6679999999999999999999999999999 5999999999999999999887665554 3444444
Q ss_pred CHHHHHHHH
Q 019226 329 RLKDLELLL 337 (344)
Q Consensus 329 ~~~~l~~ll 337 (344)
++.+|.+++
T Consensus 258 ~~~el~~~l 266 (268)
T 3qgm_A 258 SLKDMVEAL 266 (268)
T ss_dssp SHHHHHHTC
T ss_pred CHHHHHHHH
Confidence 455565554
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=137.20 Aligned_cols=113 Identities=20% Similarity=0.250 Sum_probs=88.3
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.|+.|+++|++++++||.....++..++.+ ++. .++. . .||+++
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~l-gl~------~~~~------------------------~-----~kpk~~ 97 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQL-GIT------HYYK------------------------G-----QVDKRS 97 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHH-TCC------EEEC------------------------S-----CSSCHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHc-CCc------ccee------------------------C-----CCChHH
Confidence 588999999999999999999999988886 433 2333 1 399999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 338 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~ 338 (344)
.+..+++++|+++++|+||||+.+|+++++.+|+.+++ .+ ........+++++.+..+.. +.++.+++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~--~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll 167 (191)
T 3n1u_A 98 AYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SN--AVPQVLEFADWRTERTGGRGAVRELCDLIL 167 (191)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TT--CCHHHHHHSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CC--ccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999753 22 22333445677777755443 556666554
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.6e-17 Score=147.32 Aligned_cols=225 Identities=12% Similarity=0.103 Sum_probs=131.1
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhc---CCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCC--
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWP-- 139 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-- 139 (344)
|++|+|+||+||||+++...+.+.+.+++.++ |+.... .+|+....+..++...+++
T Consensus 3 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~i------------------aTGR~~~~~~~~~~~l~~~~~ 64 (279)
T 4dw8_A 3 LKYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVL------------------ASGRPTYGIVPLANELRMNEF 64 (279)
T ss_dssp -CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEE------------------ECSSCHHHHHHHHHHTTGGGT
T ss_pred CcceEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEE------------------EcCCChHHHHHHHHHhCCCCC
Confidence 56899999999999999877777777776654 554332 3455555555555555531
Q ss_pred ----------------CccccCCCCCCchhHHHHHHHHHHH--------------------HHHHHHHHHHhCCCccCcc
Q 019226 140 ----------------SSTIFDNPPVTDDDQAKLIDLIQDW--------------------KTERYQQIIKSGTVEPRPG 183 (344)
Q Consensus 140 ----------------~~~~~~~~~~~~~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~~~~~pg 183 (344)
..+++.....+.+...++.+.+.+. +....... . ...+.+
T Consensus 65 ~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~ 140 (279)
T 4dw8_A 65 GGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYECARTNHLSILTYDGAEIVTENSLDPYVQKEAFL-N---KMAIRE 140 (279)
T ss_dssp TCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHHHHHTTCEEEEEETTEEEESCTTCHHHHHHHHH-H---TCEEEE
T ss_pred CCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHHHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhh-c---CCCccc
Confidence 1122223344455555544444321 00111111 0 112234
Q ss_pred HHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh-cccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF-EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 184 v~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
+.++.+.++...+++.++++ ........+.+.. .+ ..+..+.+. ....+....++
T Consensus 141 ~~~~~~~~~~~~~ki~~~~~--~~~~~~~~~~l~~--~~~~~~~~~~s~--------------------~~~~ei~~~~~ 196 (279)
T 4dw8_A 141 TNDFLTDITLPVAKCLIVGD--AGKLIPVESELCI--RLQGKINVFRSE--------------------PYFLELVPQGI 196 (279)
T ss_dssp CSCHHHHSCSCCSCEEEESC--HHHHHHHHHHHHH--HTTTTCEEEEEE--------------------TTEEEEECTTC
T ss_pred HHHHHHhhcCCceEEEEeCC--HHHHHHHHHHHHH--HhcCCEEEEEcC--------------------CcEEEEecCCC
Confidence 44555555556677766643 2234444444311 11 112333330 00023345678
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
+|+..++.+++++|+++++|++|||+.||++|++.+|+..++ ++...+....+++++++..+ ..+.+.+++.+
T Consensus 197 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~e---~Gv~~~i~~~~ 269 (279)
T 4dw8_A 197 DKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM---GNAQEPVKKAADYITLTNDE---DGVAEAIERIF 269 (279)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCGGG---THHHHHHHHHC
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc---CCCcHHHHHhCCEEcCCCCC---cHHHHHHHHHH
Confidence 889999999999999999999999999999999999987665 44545555667888876544 45666666554
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.7e-16 Score=149.92 Aligned_cols=97 Identities=21% Similarity=0.291 Sum_probs=84.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCC---------hh---hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAAT---------KS---SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~---------~~---~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
.++||+.++|+.|+++|++++|+||.. .. .+...++.+ ++. |+.+++
T Consensus 87 ~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~l-gl~----fd~i~~---------------- 145 (416)
T 3zvl_A 87 ILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKL-GVP----FQVLVA---------------- 145 (416)
T ss_dssp ESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHH-TSC----CEEEEE----------------
T ss_pred hhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHc-CCC----EEEEEE----------------
Confidence 389999999999999999999999965 12 255666665 542 577887
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecCH-----------------hhHHHHHHcCCeEEE
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACVI 304 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs~-----------------~Di~~a~~aG~~~v~ 304 (344)
++++..+||+|++|..+++++| +++++|+||||+. .|+++|+++|+.++.
T Consensus 146 --------~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~ 216 (416)
T 3zvl_A 146 --------THAGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFAT 216 (416)
T ss_dssp --------CSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEEC
T ss_pred --------CCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccC
Confidence 8889999999999999999998 9999999999997 799999999999874
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.2e-16 Score=134.23 Aligned_cols=113 Identities=16% Similarity=0.175 Sum_probs=86.7
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
+|+.|+++|++++++||.....++..++.+ ++.. ++. . .+++++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~l-gl~~------~f~------------------------~-----~~~K~~ 97 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSL-GIEH------LFQ------------------------G-----REDKLV 97 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHH-TCSE------EEC------------------------S-----CSCHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHc-CCHH------Hhc------------------------C-----cCChHH
Confidence 899999999999999999999999999886 5433 333 1 167789
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 338 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~ 338 (344)
.+..+++++|+++++|++|||+.+|+++++++|+.+++.+ ........+++++.+..+.- +.++.+++.
T Consensus 98 ~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~---~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~ 167 (189)
T 3mn1_A 98 VLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVAN---AASFVREHAHGITRAQGGEGAAREFCELIL 167 (189)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHTSSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeCC---ccHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999865422 22233345677776644332 456665554
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-15 Score=127.52 Aligned_cols=107 Identities=10% Similarity=0.134 Sum_probs=69.4
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCC---hh--hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccc
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KS--SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---~~--~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
...++||+.++|+.|+++ ++++|+||.. .. .....++.+++...+ ++.+++
T Consensus 67 ~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~--~~~i~~--------------------- 122 (180)
T 3bwv_A 67 NLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDP--QHFVFC--------------------- 122 (180)
T ss_dssp SCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCG--GGEEEC---------------------
T ss_pred cCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCc--ccEEEe---------------------
Confidence 468999999999999985 9999999983 21 123334443222222 355655
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHH
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK 331 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~ 331 (344)
+++. ++ ++|++|||+.+|+. .++| .+|++.++.... ..+.+.+. ++.
T Consensus 123 ---~~~~---------------~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~-----~~~ 169 (180)
T 3bwv_A 123 ---GRKN---------------II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVS-----GWR 169 (180)
T ss_dssp ---SCGG---------------GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEEC-----SHH
T ss_pred ---CCcC---------------ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecC-----CHH
Confidence 5441 12 78999999999985 5689 999997654321 23344444 456
Q ss_pred HHHHHHHHh
Q 019226 332 DLELLLQNV 340 (344)
Q Consensus 332 ~l~~ll~~~ 340 (344)
+|..+++++
T Consensus 170 el~~~l~~~ 178 (180)
T 3bwv_A 170 DVKNYFNSI 178 (180)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 667777654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-16 Score=141.24 Aligned_cols=218 Identities=14% Similarity=0.126 Sum_probs=128.2
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhc---CCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCC-
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPS- 140 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 140 (344)
|++|+|+||+||||+++...+.+.+.+++.++ |+.... .+|+....+..++...|.+.
T Consensus 4 M~~kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~i------------------aTGR~~~~~~~~~~~~~~~~~ 65 (290)
T 3dnp_A 4 MSKQLLALNIDGALLRSNGKIHQATKDAIEYVKKKGIYVTL------------------VTNRHFRSAQKIAKSLKLDAK 65 (290)
T ss_dssp --CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEE------------------BCSSCHHHHHHHHHHTTCCSC
T ss_pred CcceEEEEcCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEE------------------ECCCChHHHHHHHHHcCCCCe
Confidence 56899999999999999877777777776654 554332 34666666666666666541
Q ss_pred -------------ccccCCCCCCchhHHHHHHHHHHHHHH---------H---------HHHHHHhC-------CCccCc
Q 019226 141 -------------STIFDNPPVTDDDQAKLIDLIQDWKTE---------R---------YQQIIKSG-------TVEPRP 182 (344)
Q Consensus 141 -------------~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~---------~~~~~~~~-------~~~~~p 182 (344)
.+.+.....+.+...++.+.+.+.-.. + +....... ...+.+
T Consensus 66 ~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (290)
T 3dnp_A 66 LITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVLESYQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVE 145 (290)
T ss_dssp EEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHHHTSSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECS
T ss_pred EEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHHHHcCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccC
Confidence 122222333333333333322211000 0 00000000 023456
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
++.+++..+....+++.+ +.. ........+.+. .....+..+.+. ....+.+..+.
T Consensus 146 ~~~~~~~~~~~~~~ki~~-~~~-~~~~~~~~~~l~--~~~~~~~~~~s~--------------------~~~~ei~~~~~ 201 (290)
T 3dnp_A 146 SLSDLLMDEPVSAPVIEV-YTE-HDIQHDITETIT--KAFPAVDVIRVN--------------------DEKLNIVPKGV 201 (290)
T ss_dssp CHHHHHHHSCCCCSEEEE-ECC-GGGHHHHHHHHH--HHCTTEEEEEEE--------------------TTEEEEEETTC
T ss_pred CHHHHHhcCCCCceEEEE-eCC-HHHHHHHHHHHH--hhCCcEEEEEeC--------------------CCeEEEEECCC
Confidence 777888777777788855 333 333455554431 111123333320 00023345678
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccc
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSN 327 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~ 327 (344)
+++..++.+++++|+++++|++|||+.||++|++.||+..++ ++...+....+++++++..+
T Consensus 202 ~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 202 SKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM---GNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCTTT
T ss_pred CHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe---cCCcHHHHHhcCEECCCCCc
Confidence 899999999999999999999999999999999999998766 44444455567888776554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.1e-15 Score=134.97 Aligned_cols=207 Identities=13% Similarity=0.041 Sum_probs=117.6
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhc---CCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
++|+|+||+||||+++...+.+...+++.++ |+.... .+|+.......++...|.+...
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i------------------~TGR~~~~~~~~~~~l~~~~~~ 63 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIML------------------VTGNTVQFAEAASILIGTSGPV 63 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEE------------------ECSSCHHHHHHHHHHHTCCSCE
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEE------------------EcCCChhHHHHHHHHcCCCCeE
Confidence 5899999999999998776666666666544 665433 3455555555555555554322
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHH-Hc-CCe-----------EEEEe-CCChhh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAK-AA-GKK-----------VAVCS-AATKSS 208 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk-~~-g~~-----------v~ivT-n~~~~~ 208 (344)
+..++..--...+. + ....+ +.+.++++.++ +. |+. +++++ +.....
T Consensus 64 i~~nGa~i~~~~~~----------------~--~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (231)
T 1wr8_A 64 VAEDGGAISYKKKR----------------I--FLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVET 124 (231)
T ss_dssp EEGGGTEEEETTEE----------------E--ESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHH
T ss_pred EEeCCcEEEeCCEE----------------E--EeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHH
Confidence 22221100000000 0 00001 23333333333 22 222 35555 445555
Q ss_pred HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q 019226 209 VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDS 288 (344)
Q Consensus 209 ~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs 288 (344)
++..++.+ + . .++.+ + | ....+.+..++|++..++.+++++|+++++|++|||+
T Consensus 125 ~~~~~~~~-~-~---~~~~~-~----------~----------~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 125 VREIINEL-N-L---NLVAV-D----------S----------GFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp HHHHHHHT-T-C---SCEEE-E----------C----------SSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred HHHHHHhc-C-C---cEEEE-e----------c----------CcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 66666553 2 1 13443 3 0 0002334568999999999999999999999999999
Q ss_pred HhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHhh
Q 019226 289 VIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 289 ~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
.||++|++.+|+.+ .+.++. .+....+++++++..+ +.+.+++++++
T Consensus 179 ~nD~~~~~~ag~~v-~~~~~~--~~~~~~a~~v~~~~~e---~Gv~~~l~~~~ 225 (231)
T 1wr8_A 179 ENDLDAFKVVGYKV-AVAQAP--KILKENADYVTKKEYG---EGGAEAIYHIL 225 (231)
T ss_dssp GGGHHHHHHSSEEE-ECTTSC--HHHHTTCSEECSSCHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeE-EecCCC--HHHHhhCCEEecCCCc---chHHHHHHHHH
Confidence 99999999999984 443332 2223456777766544 23555555443
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=6.1e-17 Score=146.51 Aligned_cols=76 Identities=12% Similarity=0.190 Sum_probs=49.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
..+..++..++.+++++|+++++|++|||+.||++|++.||+..++- +...+....+++++++..+- .+.+.++
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~---na~~~~k~~A~~v~~~~~e~---Gv~~~i~ 266 (279)
T 3mpo_A 193 NRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG---NAIDEVKEAAQAVTLTNAEN---GVAAAIR 266 (279)
T ss_dssp ESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC------CCHHHHHCSCBC---------CHHHHHC
T ss_pred cCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc---CCCHHHHHhcceeccCCCcc---HHHHHHH
Confidence 34555899999999999999999999999999999999999876653 33334445577777765443 3444444
Q ss_pred Hh
Q 019226 339 NV 340 (344)
Q Consensus 339 ~~ 340 (344)
++
T Consensus 267 ~~ 268 (279)
T 3mpo_A 267 KY 268 (279)
T ss_dssp --
T ss_pred HH
Confidence 43
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=128.87 Aligned_cols=111 Identities=14% Similarity=0.116 Sum_probs=86.3
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
+|+.|+++|++++++||.....++..++.+ ++. .++. . .||++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~l-gl~------~~~~------------------------~-----~kpk~~ 104 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATL-GIT------HLYQ------------------------G-----QSNKLI 104 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHH-TCC------EEEC------------------------S-----CSCSHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHc-CCc------eeec------------------------C-----CCCCHH
Confidence 889999999999999999998888888876 433 2333 1 599999
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHH-HHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLK-DLELL 336 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~l 336 (344)
.|..+++++|+++++|+||||+.+|+.+++++|+.+++.+ +. ......+++++.+..+...- ++.+.
T Consensus 105 ~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~-~~--~~~~~~ad~v~~~~~~~g~~~~~l~~ 172 (188)
T 2r8e_A 105 AFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVAD-AH--PLLIPRADYVTRIAGGRGAVREVCDL 172 (188)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTT-SC--TTTGGGSSEECSSCTTTTHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecC-cC--HHHHhcCCEEEeCCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999987543 21 22223467888877555432 44433
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.62 E-value=4.7e-16 Score=141.39 Aligned_cols=76 Identities=9% Similarity=0.110 Sum_probs=59.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
...+.+|+..++.+++++|++++++++|||+.||++|++.+|+..++ ++...+....++++.++..+ +.+.+.|
T Consensus 206 ~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~s~~e---dGv~~~l 279 (283)
T 3dao_A 206 NAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV---SNARQEVIAAAKHTCAPYWE---NGVLSVL 279 (283)
T ss_dssp EETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE---TTSCHHHHHHSSEEECCGGG---THHHHHH
T ss_pred eeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc---CCCCHHHHHhcCeECCCCCC---ChHHHHH
Confidence 44567789999999999999999999999999999999999988766 44444445567888776544 3355555
Q ss_pred HH
Q 019226 338 QN 339 (344)
Q Consensus 338 ~~ 339 (344)
++
T Consensus 280 ~~ 281 (283)
T 3dao_A 280 KS 281 (283)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-16 Score=139.06 Aligned_cols=77 Identities=13% Similarity=0.148 Sum_probs=60.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
....+++++..++.+++++|+++++|++|||+.||++|++.||+..++ ++...+....+++++++..+- .+.+.
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam---~na~~~~k~~A~~v~~~~~ed---Gv~~~ 267 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM---KNSHQQLKDIATSICEDIFDN---GIYKE 267 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE---TTSCHHHHHHCSEEECCGGGT---HHHHH
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe---cCccHHHHHhhhheeCCCchh---HHHHH
Confidence 355688999999999999999999999999999999999999987665 444445556678888776543 45555
Q ss_pred HHH
Q 019226 337 LQN 339 (344)
Q Consensus 337 l~~ 339 (344)
|++
T Consensus 268 l~~ 270 (274)
T 3fzq_A 268 LKR 270 (274)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=6e-17 Score=146.04 Aligned_cols=110 Identities=18% Similarity=0.257 Sum_probs=84.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+++|++++++||.....++.+++.+ ++..+ |+.++
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-gl~~~--f~~~~---------------------------- 183 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKEL-NIQEY--YSNLS---------------------------- 183 (263)
Confidence 479999999999999999999999999999899888886 65544 22221
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccccc--CCcccc
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIY--PDLSNV 328 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~--~~~~~~ 328 (344)
|+.+..++++++..+++|+||||+.+|+.+++++|+...|- .........+++++ +++.++
T Consensus 184 -------p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g---~~~~~~~~~ad~v~~~~~l~~l 246 (263)
T 2yj3_A 184 -------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG---NGVDISKNVADIILVSNDIGTL 246 (263)
Confidence 34567889999999999999999999999999999876553 22222334466666 555543
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=121.58 Aligned_cols=112 Identities=13% Similarity=0.079 Sum_probs=83.2
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.|+.|+++|++++|+||. ..++..++.+ .+ +++ ++. + .+++++
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l-~l----gi~-~~~------------------------g-----~~~K~~ 86 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSAL-KL----DCK-TEV------------------------S-----VSDKLA 86 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTT-CC----CCC-EEC------------------------S-----CSCHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHh-CC----CcE-EEE------------------------C-----CCChHH
Confidence 689999999999999998 5577777742 11 123 333 2 367899
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLLQ 338 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll~ 338 (344)
.+..+++++|+++++|+||||+.||++|++.+|+.+++ . .........++++.++-.+-- +.++.+.+-
T Consensus 87 ~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~-~--na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il 156 (168)
T 3ewi_A 87 TVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP-A--DACSGAQKAVGYICKCSGGRGAIREFAEHIF 156 (168)
T ss_dssp HHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC-T--TCCHHHHTTCSEECSSCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe-C--ChhHHHHHhCCEEeCCCCCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999764 2 223334455778887655543 555555543
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=6.4e-15 Score=132.35 Aligned_cols=77 Identities=12% Similarity=0.056 Sum_probs=59.2
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
....+.+|+..++.+++++|++++++++|||+.||++|++.+|+..++ ++...+....++++.++..+ +-+.+.
T Consensus 188 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~e---dGv~~~ 261 (268)
T 3r4c_A 188 VNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM---GNASEKVQSVADFVTDTVDN---SGLYKA 261 (268)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHTCSEECCCTTT---THHHHH
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe---CCCcHHHHHhcCEeeCCCCc---CHHHHH
Confidence 345577889999999999999999999999999999999999988665 34444445567888876544 345555
Q ss_pred HHH
Q 019226 337 LQN 339 (344)
Q Consensus 337 l~~ 339 (344)
|++
T Consensus 262 l~~ 264 (268)
T 3r4c_A 262 LKH 264 (268)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.4e-15 Score=137.37 Aligned_cols=78 Identities=15% Similarity=0.021 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+++++..++.+++++|+++++|++|||+.||++|++.+|+..+ +. +...+....+++++++..+- .+.+.+
T Consensus 186 ~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va-~~--na~~~~k~~a~~v~~~~~~d---GVa~~l 259 (271)
T 1rlm_A 186 IIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA-MG--NAAENIKQIARYATDDNNHE---GALNVI 259 (271)
T ss_dssp ECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-CT--TCCHHHHHHCSEECCCGGGT---HHHHHH
T ss_pred EcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEE-eC--CccHHHHHhCCeeCcCCCCC---hHHHHH
Confidence 4568899999999999999999999999999999999999999755 33 22223334567777766543 344444
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
++++
T Consensus 260 ~~~~ 263 (271)
T 1rlm_A 260 QAVL 263 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-15 Score=138.96 Aligned_cols=78 Identities=8% Similarity=0.006 Sum_probs=59.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
...+.+|+..++.+++++|+++++|++|||+.||++|++.+|+..++ ++...+....+++++++..+- .+.+.+
T Consensus 223 ~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam---~na~~~~k~~Ad~v~~~~~ed---Gv~~~l 296 (304)
T 3l7y_A 223 ITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM---ANAPKNVKAAANYQAKSNDES---GVLDVI 296 (304)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC---TTSCHHHHHHCSEECCCGGGT---HHHHHH
T ss_pred EcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc---CCcCHHHHHhccEEcCCCCcc---hHHHHH
Confidence 34567789999999999999999999999999999999999987665 444445556678887765442 345555
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
++.+
T Consensus 297 ~~~~ 300 (304)
T 3l7y_A 297 DNYL 300 (304)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5444
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.54 E-value=8.1e-15 Score=131.10 Aligned_cols=230 Identities=14% Similarity=0.140 Sum_probs=125.2
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhc---CCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHF---NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSST 142 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (344)
++|+|+||+||||+++++.+.+...+++.++ |+.... .+|+.......++...+... -
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~------------------aTGR~~~~~~~~~~~l~~~~-~ 62 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAI------------------ATGRAPFMFEHVRKQLGIDS-F 62 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEE------------------ECSSCGGGSHHHHHHHTCCC-E
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEE------------------ECCCChHHHHHHHHhcCCCE-E
Confidence 4799999999999998876666666666544 776433 35555555555555554432 1
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCCh-------hhHHHHHHH
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATK-------SSVILCLEN 215 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~-------~~~~~~l~~ 215 (344)
+..++...... .+.+ .......+++.++++.+++.|+.+.++++... ......+..
T Consensus 63 i~~nGa~i~~~----------------~~~i-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (258)
T 2pq0_A 63 VSFNGQYVVFE----------------GNVL-YKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMAS 125 (258)
T ss_dssp EEGGGTEEEET----------------TEEE-EECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHHHH
T ss_pred EECCCCEEEEC----------------CEEE-EEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHHHh
Confidence 11121110000 0000 01123456788888889888888888876541 111112221
Q ss_pred hhc-----cc-hh----cccceeecccch-hhhhccCCcCCcccccc--ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE
Q 019226 216 LIG-----ME-RF----EGLDCFLADCQS-YVLMTNGTLMPNRVCVC--AHQGDDVKQKKPDPSIYVTAAKRLGISEKDC 282 (344)
Q Consensus 216 l~~-----~~-~~----~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~ 282 (344)
. . +. .+ ..++.++..... ...... . .|...+.. ++.-+-+..+-.|...++.+++++|+++++|
T Consensus 126 ~-~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ 202 (258)
T 2pq0_A 126 L-KFAHPPVDPLYYENKDIYQALLFCRAEEEEPYVR-N-YPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDV 202 (258)
T ss_dssp T-TCCCCCBCTTGGGGSCCCEEEECSCHHHHHHHHH-H-CTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGE
T ss_pred h-cCCccccccchhhccCceEEEEECCHHHHHHHHH-h-CCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHE
Confidence 1 1 00 00 001111110000 000000 0 01000000 0001123456677899999999999999999
Q ss_pred EEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 283 LVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 283 i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
++|||+.||++|++.+|+.+++ ++...+....++++.++..+ +-+.+.+++.
T Consensus 203 ia~GDs~NDi~ml~~ag~~vam---~na~~~~k~~A~~v~~~~~~---dGva~~i~~~ 254 (258)
T 2pq0_A 203 YAFGDGLNDIEMLSFVGTGVAM---GNAHEEVKRVADFVTKPVDK---EGIWYGLKQL 254 (258)
T ss_dssp EEECCSGGGHHHHHHSSEEEEE---TTCCHHHHHTCSEEECCGGG---THHHHHHHHT
T ss_pred EEECCcHHhHHHHHhCCcEEEe---CCCcHHHHHhCCEEeCCCCc---chHHHHHHHh
Confidence 9999999999999999998775 33333444557888776554 3455555543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.8e-15 Score=135.76 Aligned_cols=76 Identities=8% Similarity=0.091 Sum_probs=57.4
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..++|++..+..+++++|+++++|++|||+.||++|++.+|+.+++ ++...+....+++++++..+- -+.+++
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~d---Gv~~~l 255 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM---GQAKEDVKAAADYVTAPIDED---GISKAM 255 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHSSEECCCGGGT---HHHHHH
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe---cCccHHHHhhCCEEeccCchh---hHHHHH
Confidence 56789999999999999999999999999999999999999997655 222223334466777665542 144555
Q ss_pred HH
Q 019226 338 QN 339 (344)
Q Consensus 338 ~~ 339 (344)
++
T Consensus 256 ~~ 257 (261)
T 2rbk_A 256 KH 257 (261)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.50 E-value=7.4e-14 Score=125.24 Aligned_cols=128 Identities=13% Similarity=0.121 Sum_probs=83.2
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCC---hhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAAT---KSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCA 252 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~---~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (344)
....++||+.++|+.|+++|++++|+||.. ...+...++.+ ++..+..++.+++
T Consensus 98 ~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~-Gl~~v~~~~vi~~---------------------- 154 (258)
T 2i33_A 98 AEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERV-GAPQATKEHILLQ---------------------- 154 (258)
T ss_dssp CCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHH-TCSSCSTTTEEEE----------------------
T ss_pred CCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHc-CCCcCCCceEEEC----------------------
Confidence 346899999999999999999999999988 34455566665 5552112455555
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHH-------H---------cCCeEEEEeCCCchhhhcc
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAAT-------R---------AGMACVITYTSSTAEQDFK 316 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~-------~---------aG~~~v~v~~~~~~~~~l~ 316 (344)
+++. .||.+. ..+. ..+. +.|+||||+.+|+.+|. + +|+.++.+.++.....+
T Consensus 155 --~~~~--~K~~~~--~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~-- 223 (258)
T 2i33_A 155 --DPKE--KGKEKR--RELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE-- 223 (258)
T ss_dssp --CTTC--CSSHHH--HHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH--
T ss_pred --CCCC--CCcHHH--HHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh--
Confidence 4433 455543 3332 3343 45999999999999982 4 89999999777553322
Q ss_pred ccccccCCccccCHHHHHHHHHH
Q 019226 317 DAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 317 ~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
.....+...++.++=.++-.+
T Consensus 224 --~~~~~~~~~~~~~~~~~~~~~ 244 (258)
T 2i33_A 224 --GALYDYNFKKSDAEKDKIRHD 244 (258)
T ss_dssp --HHHTTTCTTSCHHHHHHHHHH
T ss_pred --hhhcCCCCCCCHHHHHHHHHH
Confidence 122445545555554444433
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=7.5e-15 Score=133.47 Aligned_cols=78 Identities=14% Similarity=0.223 Sum_probs=57.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccc--ccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA--IYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~ 335 (344)
...+.+++..++.+++++|++++++++|||+.||++|++.+|+..++ ++...+.+..+++ ++++..+ +-+.+
T Consensus 204 ~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm---~Na~~~vk~~A~~~~v~~sn~e---dGva~ 277 (285)
T 3pgv_A 204 MAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM---ANAHQRLKDLHPELEVIGSNAD---DAVPR 277 (285)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCTTSEECCCGGG---THHHH
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc---cCCCHHHHHhCCCCEecccCCc---chHHH
Confidence 44567789999999999999999999999999999999999988665 4444444444543 4444332 44555
Q ss_pred HHHHhh
Q 019226 336 LLQNVV 341 (344)
Q Consensus 336 ll~~~~ 341 (344)
.+++++
T Consensus 278 ~i~~~~ 283 (285)
T 3pgv_A 278 YLRKLY 283 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.1e-13 Score=118.16 Aligned_cols=148 Identities=8% Similarity=0.034 Sum_probs=95.0
Q ss_pred CccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcC-Ccc------------
Q 019226 181 RPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM-PNR------------ 247 (344)
Q Consensus 181 ~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~------------ 247 (344)
.|.+.+.|++|+++|++++++|+.....+...++.+ ++.. .+++.+|.++.-.+|+.. ...
T Consensus 24 ~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l-~~~~-----~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~ 97 (227)
T 1l6r_A 24 STKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFL-GING-----PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMS 97 (227)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCCS-----CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHh-CCCC-----eEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHH
Confidence 345677888999999999999999988888888776 4322 134434444332123221 000
Q ss_pred --------------------------------------cccc--ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEec
Q 019226 248 --------------------------------------VCVC--AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVED 287 (344)
Q Consensus 248 --------------------------------------~~~~--~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGD 287 (344)
+.+. .+.-+-+..+.+++..++.+++++|++++++++|||
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD 177 (227)
T 1l6r_A 98 KRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGD 177 (227)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHhcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECC
Confidence 0000 000011244578899999999999999999999999
Q ss_pred CHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 288 SVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 288 s~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+.||++|++.+|+..+ +.++ .......+++++.+..+ +.+.++++++
T Consensus 178 ~~nD~~m~~~ag~~va-~~n~--~~~~k~~a~~v~~~~~~---~Gv~~~l~~~ 224 (227)
T 1l6r_A 178 SNNDMPMFQLPVRKAC-PANA--TDNIKAVSDFVSDYSYG---EEIGQIFKHF 224 (227)
T ss_dssp SGGGHHHHTSSSEEEE-CTTS--CHHHHHHCSEECSCCTT---HHHHHHHHHT
T ss_pred cHHhHHHHHHcCceEE-ecCc--hHHHHHhCCEEecCCCC---cHHHHHHHHH
Confidence 9999999999999754 4322 22333456777765433 4566666654
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.1e-13 Score=121.54 Aligned_cols=75 Identities=19% Similarity=0.126 Sum_probs=55.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
..+-.+...+..+++++|+++++|++|||+.||++|++.+|+. +.+.++. .+....+++++++..+ +-+.+.++
T Consensus 212 ~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~~~~--~~~~~~a~~v~~~~~~---dGVa~~i~ 285 (288)
T 1nrw_A 212 SRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAR--EDIKSIADAVTLTNDE---HGVAHMMK 285 (288)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCC--HHHHHHCSEECCCGGG---THHHHHHH
T ss_pred cCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcE-EEEcCCC--HHHHhhCceeecCCCc---ChHHHHHH
Confidence 4456788999999999999999999999999999999999995 4454332 2223346777766544 34555554
Q ss_pred H
Q 019226 339 N 339 (344)
Q Consensus 339 ~ 339 (344)
+
T Consensus 286 ~ 286 (288)
T 1nrw_A 286 H 286 (288)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6.1e-13 Score=124.41 Aligned_cols=76 Identities=20% Similarity=0.112 Sum_probs=55.8
Q ss_pred CCCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCC
Q 019226 258 VKQKKPDPSIYVTAAKRL----------------------GI-----SEKDCLVVEDSVI-GLQAATRAGMACVITYTSS 309 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~l----------------------gv-----~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~ 309 (344)
...+||++.+|+.+.+.+ |+ ++++|+||||+.. |+.+|+++||.+|+|.++.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 457999999999987764 22 6799999999995 9999999999999999887
Q ss_pred chhhhc---cccccccCCccccCHHHHHHHHH
Q 019226 310 TAEQDF---KDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 310 ~~~~~l---~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
...+.. ..++++++ ++.+|.+++.
T Consensus 322 ~~~~~~~~~~~pd~vi~-----~l~el~~~il 348 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVN-----DVFDAVTKTL 348 (352)
T ss_dssp CCTTCCCTTCCCSEECS-----SHHHHHHHHH
T ss_pred CCcccccccCCCCEEEC-----CHHHHHHHHH
Confidence 654331 22444444 4455555443
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=119.17 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=83.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh---HHHHHHH--------hhccchhcccceeecccchhhhhccCCcCCc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLEN--------LIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~---~~~~l~~--------l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
..++||+.++|+.|+++|++++++||..... +...++. + ++ . |+.++.
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~-~~-~---~~~~~~---------------- 245 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIA-GV-P---LVMQCQ---------------- 245 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTT-CC-C---CSEEEE----------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhccccccccc-CC-C---chheee----------------
Confidence 4679999999999999999999999987543 3445555 4 44 2 566666
Q ss_pred cccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCc-EEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 247 ~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~-~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
+++. ..||+|+++..++++++.++.+ |+||||+.+|+++|+++|+.+++|.+|
T Consensus 246 --------~~~~-~~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 246 --------REQG-DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp --------CCTT-CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred --------ccCC-CCcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 5554 4699999999999999887655 799999999999999999999999887
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.35 E-value=7.5e-12 Score=112.60 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=56.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+.+++..+..+++++|+++++|++|||+.||++|++.+|+..++ ++...+....+++++++..+ ..+.+++
T Consensus 185 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~---~n~~~~~~~~a~~v~~~~~~---dGv~~~i 258 (268)
T 1nf2_A 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNND---SGVSYVL 258 (268)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTTT---THHHHHH
T ss_pred eCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe---cCCCHHHHhhCCEEEccCCc---chHHHHH
Confidence 34466788999999999999999999999999999999999997554 22222223346777765443 3456666
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
++++
T Consensus 259 ~~~~ 262 (268)
T 1nf2_A 259 ERIS 262 (268)
T ss_dssp TTBC
T ss_pred HHHH
Confidence 5543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.32 E-value=3.6e-12 Score=115.62 Aligned_cols=78 Identities=12% Similarity=0.113 Sum_probs=56.3
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+-+++..++.+++++|++++++++|||+.||++|++.+|+..+ +.++ .......+++++++..+ +.+.+++
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~n~--~~~~~~~a~~v~~~~~~---dGV~~~l 266 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVA-VDNA--IPSVKEVANFVTKSNLE---DGVAFAI 266 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTS--CHHHHHHCSEECCCTTT---THHHHHH
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEE-ecCC--cHHHHhhCCEEecCCCc---chHHHHH
Confidence 3446678999999999999999999999999999999999999543 4322 22233346777765443 3455555
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
++++
T Consensus 267 ~~~~ 270 (282)
T 1rkq_A 267 EKYV 270 (282)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 5543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-11 Score=112.38 Aligned_cols=78 Identities=17% Similarity=0.153 Sum_probs=56.9
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccC-CccccCHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP-DLSNVRLKDLELLL 337 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~ll 337 (344)
..+-+++..++.+++++|+++++|++|||+.||++|++.+|+..+ +.++ ..+....++++++ +..+ ..+.+++
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va-~~na--~~~~k~~a~~v~~~~~~~---dGVa~~l 293 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFA-VANA--TDSAKSHAKCVLPVSHRE---GAVAYLL 293 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEE-CTTC--CHHHHHHSSEECSSCTTT---THHHHHH
T ss_pred CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE-EcCC--cHHHHhhCCEEEccCCCC---cHHHHHH
Confidence 446678999999999999999999999999999999999999744 4332 2222334667766 5433 3456666
Q ss_pred HHhhh
Q 019226 338 QNVVA 342 (344)
Q Consensus 338 ~~~~~ 342 (344)
++++.
T Consensus 294 ~~~~~ 298 (301)
T 2b30_A 294 KKVFD 298 (301)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 65543
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=9.9e-12 Score=111.15 Aligned_cols=75 Identities=9% Similarity=0.039 Sum_probs=56.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCC--CcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISE--KDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~--~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
... ++|+..++.+++++|+++ ++|++|||+.||+.|++.+|+..++-+... + .+.++.++..+ ..+.+
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-----~-~~~~~~~~~~~---~gv~~ 241 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP-----P-EGVLATPAPGP---EGFRY 241 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC-----C-TTCEECSSCHH---HHHHH
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh-----c-CCcEEeCCCCc---hHHHH
Confidence 444 788999999999999998 999999999999999999999866533222 2 34455554332 45666
Q ss_pred HHHHhhh
Q 019226 336 LLQNVVA 342 (344)
Q Consensus 336 ll~~~~~ 342 (344)
.++.++.
T Consensus 242 ~~~~~~~ 248 (259)
T 3zx4_A 242 AVERYLL 248 (259)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 6666654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.15 E-value=6e-12 Score=116.93 Aligned_cols=38 Identities=11% Similarity=-0.005 Sum_probs=30.8
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
..+.+++.++++.|++ |++++++|+.....+....+.+
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~ 139 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMI 139 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhh
Confidence 3678999999999999 9999999998766666555543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.10 E-value=4.8e-11 Score=106.30 Aligned_cols=87 Identities=20% Similarity=0.267 Sum_probs=60.8
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCCh----hhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATK----SSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~----~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
....++||+.++|+.|+++|++++++||... ..+...++.+ ++..+.. +.++.
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~l-Gi~~~~~-~~Lil--------------------- 154 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRL-GFNGVEE-SAFYL--------------------- 154 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHH-TCSCCSG-GGEEE---------------------
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHc-CcCcccc-cceec---------------------
Confidence 4578999999999999999999999999865 4677777776 6654310 03332
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA 294 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~ 294 (344)
..+ ...+...+..+.+ .|. +.+++|||..+|+.+
T Consensus 155 ---r~~---~~~K~~~r~~l~~-~Gy--~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 155 ---KKD---KSAKAARFAEIEK-QGY--EIVLYVGDNLDDFGN 188 (262)
T ss_dssp ---ESS---CSCCHHHHHHHHH-TTE--EEEEEEESSGGGGCS
T ss_pred ---cCC---CCChHHHHHHHHh-cCC--CEEEEECCChHHhcc
Confidence 221 1334455555544 454 349999999999998
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.8e-09 Score=94.75 Aligned_cols=130 Identities=13% Similarity=0.184 Sum_probs=81.9
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChh----hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccc
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKS----SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~----~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
....++||+.++|+.|+++|++++++||.... .+...++.+ ++..+..-..++.
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~l-Gi~~~~~~~Lilr--------------------- 155 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRL-GFTGVNDKTLLLK--------------------- 155 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHH-TCCCCSTTTEEEE---------------------
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHc-CcCccccceeEec---------------------
Confidence 45789999999999999999999999998654 677777776 6655411012322
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHH--------HHH---------cCCeEEEEeCCCchhhh
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQA--------ATR---------AGMACVITYTSSTAEQD 314 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~--------a~~---------aG~~~v~v~~~~~~~~~ 314 (344)
+ + ++.+......+++.|. +.+++|||+.+|+.+ +++ -|-+.++++++.--.
T Consensus 156 ---~-~----~~~K~~~r~~L~~~gy--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp~YG~-- 223 (260)
T 3pct_A 156 ---K-D----KSNKSVRFKQVEDMGY--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNTQYGD-- 223 (260)
T ss_dssp ---S-S----CSSSHHHHHHHHTTTC--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCCSCSH--
T ss_pred ---C-C----CCChHHHHHHHHhcCC--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCCCcch--
Confidence 2 1 2334555555555554 459999999999998 444 466666665443211
Q ss_pred ccccccccCCccccCHHHHHHHHHHhh
Q 019226 315 FKDAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 315 l~~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
++ ...+.+...++.++=.++-.+.+
T Consensus 224 we--~~~~~~~~~~~~~~~~~~r~~~~ 248 (260)
T 3pct_A 224 WE--GGLDKNYFKGDSQSKLDVRAKAI 248 (260)
T ss_dssp HH--HTTCTTTTTSCHHHHHHHHHHHC
T ss_pred hh--HHhcCCCCCCCHHHHHHHHHHHH
Confidence 11 22355555556555555544433
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.99 E-value=4.7e-10 Score=99.75 Aligned_cols=44 Identities=7% Similarity=-0.036 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHcCC-CCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 261 KKPDPSIYVTAAKRLGI-SEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv-~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+-.|...++.+++.+|+ +++++++|||+.||++|.+.+|+..++
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~ 221 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe
Confidence 56778999999999998 999999999999999999999998554
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.94 E-value=4.7e-09 Score=92.98 Aligned_cols=77 Identities=8% Similarity=0.028 Sum_probs=54.8
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc-------ccccccCCccccCH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK-------DAIAIYPDLSNVRL 330 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~-------~~~~~~~~~~~~~~ 330 (344)
+..+-+++..+..+++++|++++++++|||+.||++|++.+|+..++ . +...+... .++++.++..+
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~--na~~~~k~~a~~~~~~a~~v~~~~~~--- 230 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-R--NAQPELLHWYDQWGDSRHYRAQSSHA--- 230 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-T--TCCHHHHHHHHHHCCTTEEECSSCHH---
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-c--CCcHHHHHHHhcccccceeecCCcch---
Confidence 44567889999999999999999999999999999999999987443 3 22222222 14566665433
Q ss_pred HHHHHHHHHh
Q 019226 331 KDLELLLQNV 340 (344)
Q Consensus 331 ~~l~~ll~~~ 340 (344)
+-+.+.+++.
T Consensus 231 dGva~~i~~~ 240 (244)
T 1s2o_A 231 GAILEAIAHF 240 (244)
T ss_dssp HHHHHHHHHT
T ss_pred hHHHHHHHHh
Confidence 4455555543
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.8e-08 Score=95.20 Aligned_cols=110 Identities=12% Similarity=0.073 Sum_probs=68.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (344)
++++||+.++++.|+++|++++|||++....++.+.+.+ ++..-..-+.++. +-+++ .+|.+... . ..
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~l-g~~y~ip~~~Vig---~~l~~~~dG~~tg~-~------~~ 288 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDT-NNNYKMKEEKVLG---LRLMKDDEGKILPK-F------DK 288 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCT-TSSCCCCGGGEEE---ECEEECTTCCEEEE-E------CT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHh-CcccCCCcceEEE---eEEEEecCCceeee-e------cC
Confidence 347999999999999999999999999999999999887 4322111233433 22223 24443100 0 01
Q ss_pred C--CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcC
Q 019226 257 D--VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 257 ~--~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
. ...+.-++..++..++. .+....++++|||.+|+.|.+..+
T Consensus 289 ~~p~~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 289 DFPISIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp TSCCCSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHCT
T ss_pred ccceeCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcCc
Confidence 0 11111133444433322 244577999999999999999843
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.87 E-value=5.6e-09 Score=94.18 Aligned_cols=79 Identities=11% Similarity=-0.065 Sum_probs=43.7
Q ss_pred CCCCCCCHHHHHHHHHHcC-CCCCc--EEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc---ccc-cccCCccccCH
Q 019226 258 VKQKKPDPSIYVTAAKRLG-ISEKD--CLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK---DAI-AIYPDLSNVRL 330 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lg-v~~~~--~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~---~~~-~~~~~~~~~~~ 330 (344)
+..+.+++..+..+++++| +++++ +++|||+.||+.|++.+|+. |.+.++......+. .++ ++.++..+
T Consensus 184 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~--- 259 (275)
T 1xvi_A 184 LDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGP--- 259 (275)
T ss_dssp EETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC-------------------------
T ss_pred ecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCc---
Confidence 3456678999999999999 99999 99999999999999999997 55554443233332 245 56654433
Q ss_pred HHHHHHHHHh
Q 019226 331 KDLELLLQNV 340 (344)
Q Consensus 331 ~~l~~ll~~~ 340 (344)
+.+.+.++++
T Consensus 260 dGVa~~l~~~ 269 (275)
T 1xvi_A 260 EGWREGLDHF 269 (275)
T ss_dssp ----------
T ss_pred hHHHHHHHHH
Confidence 2344444443
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.5e-10 Score=99.22 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=82.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
...+||+.++|+.|++. ++++|+|++....++.+++.+ +...+ |+.++. +++
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~l-d~~~~--f~~~l~------------------------rd~ 118 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLL-DRWGV--FRARLF------------------------RES 118 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CCSSC--EEEEEC------------------------GGG
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHh-CCccc--EEEEEE------------------------ccc
Confidence 57899999999999998 999999999999999999997 65554 577766 666
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
+...| ..|.+.++++|.++++|++|||+..++.++.++|+.++
T Consensus 119 ~~~~k---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 119 CVFHR---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp CEEET---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ceecC---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 65444 56888899999999999999999999999999999864
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.80 E-value=2.2e-08 Score=91.21 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=70.7
Q ss_pred hCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 175 ~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
....++.||+.++++.|+++|++++++|++....++.+++.+ ++..- ...+++ +.+.+.++.+.- .+ .
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~-g~~~~--~~~i~~---n~l~~~~~~~~~---~~---~ 204 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS--NVKVVS---NFMDFDENGVLK---GF---K 204 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHT-TCCCT--TEEEEE---ECEEECTTSBEE---EE---C
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHc-CCCcc--cceEEe---eeEEEcccceeE---ec---c
Confidence 345789999999999999999999999999999999999997 54331 112222 333333333210 00 0
Q ss_pred CCC-CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc
Q 019226 255 GDD-VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA 298 (344)
Q Consensus 255 ~~~-~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a 298 (344)
+.. ....|+.+..-......+.-..++++++||+.||+.|++.+
T Consensus 205 ~~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l 249 (297)
T 4fe3_A 205 GELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 249 (297)
T ss_dssp SSCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTC
T ss_pred ccccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCc
Confidence 110 11233333322223334444567899999999999997744
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.74 E-value=9.1e-10 Score=93.25 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=79.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
...+||+.++|+.+++. ++++|+|++....++.+++.+ +...+ |+.++. .++
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~l-d~~~~--f~~~~~------------------------rd~ 105 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLL-DKWGA--FRARLF------------------------RES 105 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHH-CTTCC--EEEEEC------------------------GGG
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHH-CCCCc--EEEEEe------------------------ccC
Confidence 57899999999999998 999999999999999999997 55544 566665 555
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
+...| ..|.+.++++|.++++|++|||+..++.++.++|+.+
T Consensus 106 ~~~~k---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 106 CVFHR---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp SEEET---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred ceecC---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 54333 4577888999999999999999999999999999985
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.70 E-value=9.7e-08 Score=96.15 Aligned_cols=104 Identities=14% Similarity=0.163 Sum_probs=74.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|+++|++++++|+.....++...+.+ +++. ++. ...
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~~------~~~-------------------------~~~ 504 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLDL------VIA-------------------------EVL 504 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCSE------EEC-------------------------SCC
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc-CCCE------EEE-------------------------eCC
Confidence 47899999999999999999999999999999988886 5432 222 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
++.+.+ +++++... ++++||||+.||+.|.+.||....+ +.........+++++.+
T Consensus 505 --P~~K~~----~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam---g~g~~~a~~~AD~vl~~ 560 (645)
T 3j08_A 505 --PHQKSE----EVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIR 560 (645)
T ss_dssp --TTCHHH----HHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE---CCCSCCSSCCSSSEESS
T ss_pred --HHhHHH----HHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe---CCCcHHHHHhCCEEEec
Confidence 223333 44444444 8999999999999999999977554 23333334556776643
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=1.5e-07 Score=91.14 Aligned_cols=126 Identities=18% Similarity=0.173 Sum_probs=82.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhcc-----------chhcccceeecccchhhhhccCCcCCc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGM-----------ERFEGLDCFLADCQSYVLMTNGTLMPN 246 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~-----------~~~~~~d~~~~~~~~~~~~~~~~~~~~ 246 (344)
+...|++..+|+.||+.| ++.++||+....+..+++.+++. +.-.-||.+|.-+.-+.-.+++. |
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~--p- 320 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGT--V- 320 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCC--C-
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCC--c-
Confidence 567789999999999999 99999999999999999998553 11122576554111000000000 0
Q ss_pred cccccccC-----CCCCCCCCCCHHH-----HHHHHHHcCCCCCcEEEEecCH-hhHHHHH-HcCCeEEEEeCC
Q 019226 247 RVCVCAHQ-----GDDVKQKKPDPSI-----YVTAAKRLGISEKDCLVVEDSV-IGLQAAT-RAGMACVITYTS 308 (344)
Q Consensus 247 ~~~~~~~~-----~~~~~~~KP~~~~-----~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~-~aG~~~v~v~~~ 308 (344)
...|-..+ +...+. -.+..+ +..+++.+|+..++++||||.. .||..++ .+||.+++|..-
T Consensus 321 fr~Vd~~tg~l~~~~~~~~-l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViPE 393 (555)
T 2jc9_A 321 LRQVDTKTGKLKIGTYTGP-LQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPE 393 (555)
T ss_dssp EEEEETTTTEECSSCCCSC-CCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECTT
T ss_pred ceEeecCCCcccccccccc-ccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEec
Confidence 00000000 000110 111222 4889999999999999999999 5999997 999999998653
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=5.7e-06 Score=76.26 Aligned_cols=39 Identities=23% Similarity=0.167 Sum_probs=36.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
..++|++.++++.|+++|++++|||.+....++.+.+.+
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 368999999999999999999999999999999888774
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2.9e-06 Score=75.58 Aligned_cols=62 Identities=5% Similarity=-0.129 Sum_probs=45.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCc
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 325 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~ 325 (344)
..+-.|...++.+ +|++++++++||| +.||++|.+.+|...+.+ ++...+....+++++++.
T Consensus 193 ~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av--~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 193 PEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFFPET 258 (262)
T ss_dssp ETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHCTTC
T ss_pred cCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe--cCCCHHHHHhhheeCCCC
Confidence 3455567788887 8999999999999 999999999999866666 334333334466666553
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.13 E-value=7.3e-07 Score=78.47 Aligned_cols=69 Identities=7% Similarity=-0.017 Sum_probs=49.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHc--CCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRA--GMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~a--G~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
..+-.|...++.+++++| +++|||+.||++|.+.+ |...++-+. ...+++++++.. +...+.++
T Consensus 156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na-------~~~A~~v~~~~~--~~~gV~~~ 221 (239)
T 1u02_A 156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG-------ETHAKFHVADYI--EMRKILKF 221 (239)
T ss_dssp CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS-------CCCCSEEESSHH--HHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC-------CCcceEEeCCCC--CHHHHHHH
Confidence 334567899999999998 99999999999999999 998766332 133556665411 13556666
Q ss_pred HHHhh
Q 019226 337 LQNVV 341 (344)
Q Consensus 337 l~~~~ 341 (344)
|++++
T Consensus 222 l~~~~ 226 (239)
T 1u02_A 222 IEMLG 226 (239)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.2e-05 Score=81.95 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=74.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.++.|++.|++++++|+.....++.+.+.+ +++ .++. +..
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~l-gi~------~~~~-------------------------~~~ 582 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLD------LVIA-------------------------EVL 582 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCS------EEEC-------------------------SCC
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHc-CCc------EEEc-------------------------cCC
Confidence 57899999999999999999999999999999888886 543 2322 111
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
+..| ..+++++.-. ++++||||+.||+.|.+.||....+ +.........+++++.+
T Consensus 583 --P~~K----~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam---g~g~~~a~~~AD~vl~~ 638 (723)
T 3j09_A 583 --PHQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV---GSGSDVAVESGDIVLIR 638 (723)
T ss_dssp --TTCH----HHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC---CCCSCCSSCCSSEECSS
T ss_pred --HHHH----HHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe---CCCcHHHHHhCCEEEeC
Confidence 2223 3344444444 8999999999999999999977544 23333334556777643
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.04 E-value=6e-07 Score=76.98 Aligned_cols=94 Identities=11% Similarity=0.102 Sum_probs=68.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccc-hhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGME-RFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+...||+.++|+.+. +++.++|.|.+....++.+++.+ +.. .+ ++..+. .+
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~L-Dp~~~~--f~~rl~------------------------R~ 109 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKL-DPIHAF--VSYNLF------------------------KE 109 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHT-STTCSS--EEEEEC------------------------GG
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHh-CCCCCe--EEEEEE------------------------ec
Confidence 578899999999998 67999999999999999999997 433 23 343333 22
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
..... ...|.+.++.+|.++++|++|+|+..-+.+....|+..
T Consensus 110 ~c~~~---~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I 152 (204)
T 3qle_A 110 HCVYK---DGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPM 152 (204)
T ss_dssp GSEEE---TTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEEC
T ss_pred ceeEE---CCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEe
Confidence 21110 11256677888999999999999998776555555554
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.7e-05 Score=79.27 Aligned_cols=111 Identities=12% Similarity=0.090 Sum_probs=79.2
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
++.|++.+.+++|++.|++++++|+.+...++.+.+.+ +++. ++.
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~l-gi~~------v~a---------------------------- 598 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTL-GIKK------VVA---------------------------- 598 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHH-TCCC------EEC----------------------------
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCCE------EEE----------------------------
Confidence 47799999999999999999999999999999888887 5433 222
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRL 330 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~ 330 (344)
.-.|+-...+++++.-..++++||||+.||+.|.+.||....+- .........+++++.+-....+
T Consensus 599 ---~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAmg---~g~d~a~~~AD~vl~~~~~~~i 664 (736)
T 3rfu_A 599 ---EIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMG---TGTDVAIESAGVTLLHGDLRGI 664 (736)
T ss_dssp ---SCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEES---SSCSHHHHHCSEEECSCCSTTH
T ss_pred ---ecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEeC---CccHHHHHhCCEEEccCCHHHH
Confidence 11234444555555445688999999999999999999886552 2333334456776654333333
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.93 E-value=9.5e-06 Score=71.40 Aligned_cols=43 Identities=7% Similarity=-0.219 Sum_probs=32.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEe
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVED----SVIGLQAATRAGMACVITY 306 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~ 306 (344)
+-.|...++.+ +|++++++++||| +.||++|.+.+|...+.+.
T Consensus 186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~ 232 (246)
T 2amy_A 186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT 232 (246)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee
Confidence 44456666666 8999999999999 9999999999998555553
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=97.92 E-value=1.3e-05 Score=84.53 Aligned_cols=132 Identities=14% Similarity=0.124 Sum_probs=76.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc-c-ceeecccchhhhhccCCcCCcc--ccccccC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG-L-DCFLADCQSYVLMTNGTLMPNR--VCVCAHQ 254 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~-~-d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 254 (344)
++.|++.+.++.|+++|++++++|+.....+..+.+.+ ++..... . +.++. ++- + ..+.|.. -.++ +
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l-gi~~~~~~i~~~~~~--g~~--~--~~l~~~~~~~~~~-~- 673 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYT--GRE--F--DDLPLAEQREACR-R- 673 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH-TSSCTTCCCTTTEEE--HHH--H--HTSCHHHHHHHHH-H-
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CcCCCCCcccceEEE--chh--h--hhCCHHHHHHHHh-h-
Confidence 47799999999999999999999999999999999887 6543210 0 11221 000 0 0000000 0000 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
..-.....| +-...+++.+.-..+.++|+||+.||+.|.++|++...+ .++ .......+++++.+
T Consensus 674 ~~v~~r~~P--~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiam-g~g--~~~ak~aAd~vl~~ 738 (995)
T 3ar4_A 674 ACCFARVEP--SHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-GSG--TAVAKTASEMVLAD 738 (995)
T ss_dssp CCEEESCCS--SHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEE-TTS--CHHHHHTCSEEETT
T ss_pred CcEEEEeCH--HHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEe-CCC--CHHHHHhCCEEECC
Confidence 000001112 233334444433358899999999999999999998765 222 22223345666643
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.2e-05 Score=72.33 Aligned_cols=81 Identities=15% Similarity=0.200 Sum_probs=60.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch-hcccc-eeecccchhhhhccCCcCCccccccccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER-FEGLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~-~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
+...||+.++|+.+. ++|.++|.|++....+..+++.+ +... + |+ .+++ .
T Consensus 74 v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~L-Dp~~~~--f~~ri~s------------------------r 125 (372)
T 3ef0_A 74 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKII-DPTGKL--FQDRVLS------------------------R 125 (372)
T ss_dssp EEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHH-CTTSCS--SSSCEEC------------------------T
T ss_pred EEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHh-ccCCce--eeeEEEE------------------------e
Confidence 678999999999999 67999999999999999999997 4333 3 33 4444 3
Q ss_pred CCCCCCCCCHHHHHHHHHHc-CCCCCcEEEEecCHhhH
Q 019226 256 DDVKQKKPDPSIYVTAAKRL-GISEKDCLVVEDSVIGL 292 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~l-gv~~~~~i~vGDs~~Di 292 (344)
++.+. +|.+-++++ |.++++|++|+|++.-.
T Consensus 126 ~~~g~------~~~KdL~~L~~~dl~~viiiDd~~~~~ 157 (372)
T 3ef0_A 126 DDSGS------LAQKSLRRLFPCDTSMVVVIDDRGDVW 157 (372)
T ss_dssp TTSSC------SSCCCGGGTCSSCCTTEEEEESCSGGG
T ss_pred cCCCC------cceecHHHhcCCCCceEEEEeCCHHHc
Confidence 33321 233445655 89999999999998533
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.78 E-value=3.5e-05 Score=61.98 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=28.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
.+.|++.++|+.|+++|++++++|+..........+.
T Consensus 24 ~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~ 60 (142)
T 2obb_A 24 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEW 60 (142)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHH
Confidence 3557899999999999999999999875444444443
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00022 Score=68.17 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=81.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh------ccchhcccceeeccc--chhh---------hhcc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI------GMERFEGLDCFLADC--QSYV---------LMTN 240 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~------~~~~~~~~d~~~~~~--~~~~---------~~~~ 240 (344)
+...|++..+|++||++|.++.++||+.-..+...+..+. +-+.-.-||.+|.-+ |.|- ..++
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 3457899999999999999999999999999999999986 333333478776621 1211 0111
Q ss_pred CCcCCccccccccCCCCCCCCCCC---HHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHH-cCCeEEEEeCC
Q 019226 241 GTLMPNRVCVCAHQGDDVKQKKPD---PSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATR-AGMACVITYTS 308 (344)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~KP~---~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~-aG~~~v~v~~~ 308 (344)
|.+.+ ..+..+|. .--...+.+.+|+.-.+|+||||+. .||..++. .||.|+.|...
T Consensus 265 g~l~~-----------~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~E 326 (470)
T 4g63_A 265 GTMTN-----------VHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEE 326 (470)
T ss_dssp CCEEE-----------CCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECTT
T ss_pred Ccccc-----------cccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhHH
Confidence 11100 00001110 1224567778899999999999999 59888875 69999988654
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00013 Score=77.32 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=76.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeeccc----chhh----------hhccCCcC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADC----QSYV----------LMTNGTLM 244 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~----~~~~----------~~~~~~~~ 244 (344)
++.|++.+.++.|+++|++++++|+.....+..+.+.+ ++.... ...+.... .++. .+++..+.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l-gi~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~ 676 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGV-GIISEG-NETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TSSCTT-CCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc-CCCCCC-chhHHHHHhhcCcchhhccccccceEEEEcHHhh
Confidence 36799999999999999999999999999999988887 654211 00000000 0000 00000000
Q ss_pred ---Ccc-ccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccc
Q 019226 245 ---PNR-VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA 320 (344)
Q Consensus 245 ---~~~-~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~ 320 (344)
+.. --+..+ .......+-.|+-...+.+.+.-..+.++|+||+.||+.|.+.|+++..+-.++ .......+++
T Consensus 677 ~~~~~~l~~~~~~-~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~g--td~ak~aAD~ 753 (1028)
T 2zxe_A 677 DLSTEVLDDILHY-HTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISG--SDVSKQAADM 753 (1028)
T ss_dssp TCCHHHHHHHHHH-CSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSC--CHHHHHHCSE
T ss_pred hCCHHHHHHHHhh-CCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCcc--CHHHHHhcCE
Confidence 000 000000 000112333444444444443322378999999999999999999997752122 2222234566
Q ss_pred ccCC
Q 019226 321 IYPD 324 (344)
Q Consensus 321 ~~~~ 324 (344)
++.+
T Consensus 754 Vl~~ 757 (1028)
T 2zxe_A 754 ILLD 757 (1028)
T ss_dssp EETT
T ss_pred EecC
Confidence 6544
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00027 Score=74.90 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=78.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccc-------------hhhhhccCC-cC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQ-------------SYVLMTNGT-LM 244 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~-------------~~~~~~~~~-~~ 244 (344)
++.|++.+.+++|+++|++++++|+.....+..+.+.+ ++..-. ...+...+. .+..+-+|. +.
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~l-gi~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASV-GIISEG-SETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc-CCCCCC-chHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 57899999999999999999999999999888888886 553210 000000000 000000000 00
Q ss_pred C---cc-ccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcccccc
Q 019226 245 P---NR-VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIA 320 (344)
Q Consensus 245 ~---~~-~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~ 320 (344)
. .. .-+... .......+-.|+-...+.+.+.-..+.++++||+.||+.|.+.||++..+-. .........+++
T Consensus 682 ~~~~~~l~~~~~~-~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~--ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 682 DMDPSELVEALRT-HPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGI--AGSDAAKNAADM 758 (1034)
T ss_pred hCCHHHHHHHHHh-CCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCC--ccCHHHHHhcCE
Confidence 0 00 000000 0000111223333333333333333668999999999999999999976621 222333445677
Q ss_pred ccCCcccc
Q 019226 321 IYPDLSNV 328 (344)
Q Consensus 321 ~~~~~~~~ 328 (344)
++.+....
T Consensus 759 Vl~~~~~~ 766 (1034)
T 3ixz_A 759 ILLDDNFA 766 (1034)
T ss_pred EeccCCch
Confidence 77664433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0002 Score=56.28 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=25.1
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKS 207 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~ 207 (344)
.+.+++.+.+++|+++|++++++||....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 46678889999999999999999998754
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=62.69 Aligned_cols=29 Identities=7% Similarity=-0.160 Sum_probs=24.6
Q ss_pred CCCcEEEEecC----HhhHHHHHHcCCeEEEEe
Q 019226 278 SEKDCLVVEDS----VIGLQAATRAGMACVITY 306 (344)
Q Consensus 278 ~~~~~i~vGDs----~~Di~~a~~aG~~~v~v~ 306 (344)
+++++++|||+ .||++|.+.+|...+.|.
T Consensus 198 ~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~ 230 (246)
T 3f9r_A 198 DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT 230 (246)
T ss_dssp TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS
T ss_pred CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC
Confidence 57899999995 999999999987666664
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0005 Score=71.60 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=74.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc-ccc-eeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE-GLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~-~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+.... ..+ .++. ++ ..+++..+ .-++. ..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~l-GI~~~~~~~~~~~~~--g~-~~~~~~el----~~~~~--~~ 604 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQL-GLGTNIYNAERLGLG--GG-GDMPGSEV----YDFVE--AA 604 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHH-TSSCSCCCSSSSSSC--BC-CCGGGGGG----GTTTT--TT
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHc-CCCccccCccceeec--Cc-ccCCHHHH----HHHHh--hC
Confidence 47899999999999999999999999999999999987 664210 000 0110 00 00000000 00000 00
Q ss_pred CC-CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccC
Q 019226 257 DV-KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYP 323 (344)
Q Consensus 257 ~~-~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~ 323 (344)
++ ....| +-...+.+.+.-.-+.+.|+||+.||..|.++|+++..+ .++ .......++.++.
T Consensus 605 ~V~arv~P--~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~g--td~ak~aADiVl~ 667 (920)
T 1mhs_A 605 DGFAEVFP--QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGS--SDAARSAADIVFL 667 (920)
T ss_dssp SCEESCCS--THHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTS--CHHHHHSSSEEES
T ss_pred eEEEEeCH--HHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccc--cHHHHHhcCeEEc
Confidence 11 11223 222233333322237899999999999999999999766 222 2222334566553
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00017 Score=74.83 Aligned_cols=129 Identities=13% Similarity=0.022 Sum_probs=75.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCC---c---cccccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP---N---RVCVCA 252 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~---~~~~~~ 252 (344)
++.|++.+.+++|++.|+++.++|+.....+..+.+++ |+..-..-+..+. +..++. . .-.+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~l-Gi~~~~~~~~~l~---------g~~~~~~~~~~~l~~~~~- 556 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-GMGTNMYPSSALL---------GTHKDANLASIPVEELIE- 556 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTT-TCTTCCSTTSSCC---------BGGGGTTSCCSCHHHHHH-
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHh-CCccccCCcceee---------ccccccccchhHHHHHHh-
Confidence 46899999999999999999999999999888888887 6532100001111 000000 0 00000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
...+ ...-.|+-...+.+.+.-.-+.+.|+||+.||..|.++|++...+ . .........+++++.+
T Consensus 557 --~~~v-~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g--~gtd~ak~aADivl~~ 622 (885)
T 3b8c_A 557 --KADG-FAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-A--DATDAARGASDIVLTE 622 (885)
T ss_dssp --TSCC-EECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-S--SSHHHHGGGCSSCCSS
T ss_pred --hCcE-EEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-C--CccHHHHHhcceeecc
Confidence 0001 122233333333333322237899999999999999999999765 2 2222333445666544
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00028 Score=64.55 Aligned_cols=97 Identities=11% Similarity=0.175 Sum_probs=64.0
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc--eeecccchhhhhccCCcCCccccccccCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD--CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...||+.++|+.+.+. |.++|.|.+....+..+++.+ +......+. .+.. .+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vld~L-d~~~~~~~~~~~~r~------------------------~~ 217 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKMRLL-GVASNDNYKVMFYLD------------------------ST 217 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHHHHT-TCTTCSSCCCCEEEC------------------------GG
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHHHHh-CCCCCcceeEEEEEc------------------------CC
Confidence 5789999999999965 999999999999999999997 333221111 1211 11
Q ss_pred C-CC-CCCCCHHHHHHHHHHc-----CCCCCcEEEEecCHhhHHHHHHcCCe
Q 019226 257 D-VK-QKKPDPSIYVTAAKRL-----GISEKDCLVVEDSVIGLQAATRAGMA 301 (344)
Q Consensus 257 ~-~~-~~KP~~~~~~~~~~~l-----gv~~~~~i~vGDs~~Di~~a~~aG~~ 301 (344)
. +. ..+..+..|.+-++.+ |.+++++++|+|++.-+.+....|+.
T Consensus 218 ~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 218 AMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp GCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred ccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEE
Confidence 1 00 0111122244445555 88999999999999877666555554
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=91.79 E-value=2 Score=37.15 Aligned_cols=84 Identities=13% Similarity=0.110 Sum_probs=56.7
Q ss_pred CCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHH
Q 019226 195 GKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKR 274 (344)
Q Consensus 195 g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 274 (344)
+..-++||++.---... .--+.+++.+...+.+++ +..++ |-..|+++.++
T Consensus 176 ~~vNVLVTs~qLVPaLa-K~LLygL~~~fpieNIYS------------------------a~kiG----KesCFerI~~R 226 (274)
T 3geb_A 176 NCVNVLVTTTQLIPALA-KVLLYGLGSVFPIENIYS------------------------ATKTG----KESCFERIMQR 226 (274)
T ss_dssp TEEEEEEESSCHHHHHH-HHHHTTCTTTSCGGGEEE------------------------TTTTC----HHHHHHHHHHH
T ss_pred ceeEEEEecCchHHHHH-HHHHhhcccceecccccc------------------------hhhcC----HHHHHHHHHHH
Confidence 34446677655321111 111246666666677776 44443 57899999999
Q ss_pred cCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 275 LGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 275 lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
+|- .-.-++|||+...=++|+..+|+++-|...
T Consensus 227 FG~-k~~yvvIGDG~eEe~AAk~~n~PFwrI~~h 259 (274)
T 3geb_A 227 FGR-KAVYVVIGDGVEEEQGAKKHNMPFWRISCH 259 (274)
T ss_dssp HCT-TSEEEEEESSHHHHHHHHHTTCCEEECCSH
T ss_pred hCC-CceEEEECCCHHHHHHHHHcCCCeEEeecC
Confidence 984 455677999999999999999999877543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=91.17 E-value=0.51 Score=43.47 Aligned_cols=87 Identities=11% Similarity=0.009 Sum_probs=54.7
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh---hccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL---IGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
.++||+.++|+.|++.|++++++||+.....+...+.+ .++.. ..+.+++ +
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~--~~~~i~t------------------------s 82 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDV--SPLQIIQ------------------------S 82 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCC--CGGGEEC------------------------T
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCC--ChhhEee------------------------h
Confidence 67899999999999999999999998643333333222 24432 1345554 2
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEE
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v 305 (344)
.... .. | ++ ....+++||-. .-.+.++.+|+..+..
T Consensus 83 ~~~~-----~~-~---~~----~~~~v~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 83 HTPY-----KS-L---VN----KYSRILAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp TGGG-----GG-G---TT----TCSEEEEESST-THHHHHHHHTCSEEEE
T ss_pred HHHH-----HH-H---Hh----cCCEEEEECCH-HHHHHHHhCCCeEecc
Confidence 2111 01 1 01 23677788865 5567788999998753
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=91.08 E-value=0.14 Score=48.52 Aligned_cols=80 Identities=14% Similarity=0.208 Sum_probs=57.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc-eeecccchhhhhccCCcCCccccccccCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD-CFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
+...||+.++|+.+. +.|.++|.|.+....+..+++.+..-..+ |. .+++ .+
T Consensus 82 V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl~~LDp~~~~--f~~Rl~s------------------------Rd 134 (442)
T 3ef1_A 82 IKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKL--FQDRVLS------------------------RD 134 (442)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHHCTTSTT--TTTCEEC------------------------TT
T ss_pred EEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhccCCcc--ccceEEE------------------------ec
Confidence 678999999999998 56999999999999999999997322223 23 2443 23
Q ss_pred CCCCCCCCHHHHHHHHHH-cCCCCCcEEEEecCHh
Q 019226 257 DVKQKKPDPSIYVTAAKR-LGISEKDCLVVEDSVI 290 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~-lgv~~~~~i~vGDs~~ 290 (344)
+.+. .|.+-+.+ +|.+.+++|.|+|++.
T Consensus 135 ~cg~------~~~KdL~~ll~rdl~~vvIIDd~p~ 163 (442)
T 3ef1_A 135 DSGS------LAQKSLRRLFPCDTSMVVVIDDRGD 163 (442)
T ss_dssp TSSC------SSCCCGGGTCSSCCTTEEEEESCSG
T ss_pred CCCC------ceeeehHHhcCCCcceEEEEECCHH
Confidence 3221 11222343 4889999999999984
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=89.56 E-value=0.11 Score=45.96 Aligned_cols=41 Identities=20% Similarity=0.281 Sum_probs=30.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCC---ChhhHHHHHHHhhccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAA---TKSSVILCLENLIGME 220 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~---~~~~~~~~l~~l~~~~ 220 (344)
.++|++.+.|+.|+++|++++++||+ ........++.+ ++.
T Consensus 30 ~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~l-g~~ 73 (284)
T 2hx1_A 30 GLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKL-GLF 73 (284)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHT-TCT
T ss_pred eeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHC-CcC
Confidence 35789999999999999999999984 344455555554 443
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=88.64 E-value=1.1 Score=38.78 Aligned_cols=37 Identities=24% Similarity=0.303 Sum_probs=30.9
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
++|++.+.++.|+++|++++++||+.........+.+
T Consensus 18 ~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l 54 (263)
T 1zjj_A 18 AIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL 54 (263)
T ss_dssp ECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 4589999999999999999999998876666666554
|
| >1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 | Back alignment and structure |
|---|
Probab=87.08 E-value=7.8 Score=33.74 Aligned_cols=97 Identities=14% Similarity=0.137 Sum_probs=61.7
Q ss_pred ccCccHHHHHHHH---HHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 179 EPRPGVLRLMDEA---KAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 179 ~~~pgv~~~l~~L---k~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
.++|+..++++.. .+.|+++..+++.+....+. ++.+ + .+.+... +
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akr-l~~~-G------~~aVmPl-----------------------g 164 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQ-LAEI-G------CIAVMPL-----------------------A 164 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHH-HHHS-C------CSEEEEC-----------------------S
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHHh-C------CCEEEeC-----------------------C
Confidence 4568887777654 45599999767766654443 3333 2 2333321 2
Q ss_pred CCCCC--CCCCHHHHHHHHHHcCCCCCcEEEEe---cCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 256 DDVKQ--KKPDPSIYVTAAKRLGISEKDCLVVE---DSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 256 ~~~~~--~KP~~~~~~~~~~~lgv~~~~~i~vG---Ds~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
...+. +--+++.++.+.+..+++ +.++ .++.|+..+...|+..|+|++...
T Consensus 165 ~pIGsG~Gi~~~~lI~~I~e~~~vP----VI~eGGI~TPsDAa~AmeLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 165 GLIGSGLGICNPYNLRIILEEAKVP----VLVDAGVGTASDAAIAMELGCEAVLMNTAIA 220 (265)
T ss_dssp SSTTCCCCCSCHHHHHHHHHHCSSC----BEEESCCCSHHHHHHHHHHTCSEEEESHHHH
T ss_pred ccCCCCCCcCCHHHHHHHHhcCCCC----EEEeCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 22222 234688888888876664 4445 345699999999999999977544
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=86.50 E-value=0.084 Score=46.01 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=29.1
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHh---cCCCCCCCccC
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSH---FNVRCDPSSQQ 106 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~---~g~~~~~~~~~ 106 (344)
|++|+|+||+||||+++...+.+...+++.+ .|+.....+++
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaTGR 46 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVGGS 46 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999999876555555555543 57765554433
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=82.41 E-value=4.4 Score=33.74 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=53.3
Q ss_pred cHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCC
Q 019226 183 GVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKK 262 (344)
Q Consensus 183 gv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 262 (344)
++...|..+++.+-++++++..+....-..+..+++++- ..+.. ++.++
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i----~~~~~----------------------~~~~e----- 130 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKI----KEFLF----------------------SSEDE----- 130 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEE----EEEEE----------------------CSGGG-----
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCce----EEEEe----------------------CCHHH-----
Confidence 455666666777789999987654333333444434321 11111 00111
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCch
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTA 311 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~ 311 (344)
.+....-+++-|++ ++|||+.. ...|++.|+.++.+.++...
T Consensus 131 --~~~~i~~l~~~G~~----vvVG~~~~-~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 131 --ITTLISKVKTENIK----IVVSGKTV-TDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp --HHHHHHHHHHTTCC----EEEECHHH-HHHHHHTTCEEEECCCCHHH
T ss_pred --HHHHHHHHHHCCCe----EEECCHHH-HHHHHHcCCcEEEEecCHHH
Confidence 22333334455664 68998887 77899999999999876553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 344 | ||||
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 2e-21 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 3e-19 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 4e-17 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 1e-15 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 2e-15 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 2e-15 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 1e-12 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 8e-12 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 1e-11 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 2e-11 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 2e-11 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 4e-11 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 4e-11 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 2e-10 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 5e-10 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 1e-08 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 1e-08 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 3e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 8e-08 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 6e-07 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 1e-06 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 3e-06 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 5e-06 | |
| d1vjra_ | 261 | c.108.1.14 (A:) Hypothetical protein TM1742 {Therm | 4e-05 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 5e-05 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 1e-04 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 1e-04 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 0.002 |
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 89.0 bits (219), Expect = 2e-21
Identities = 28/253 (11%), Positives = 64/253 (25%), Gaps = 38/253 (15%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
FD DGV+ A+ + + +F P
Sbjct: 2 VAAFDLDGVLALPSIAG--AFRRSEEALAL------------PRDFLLGAYQTEFPEGPT 47
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ + + + +A +L +++ + + +L+
Sbjct: 48 EQLMKGKITFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAAR-SINRPMLQAA 106
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
K G + + E F
Sbjct: 107 IALKKKGFTTCIVTNNWLDDGDKRDSLA--QMMCELSQHF-------------------- 144
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTS 308
+ V KP+P IY L + + ++D L+ A GM ++ + +
Sbjct: 145 -DFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203
Query: 309 STAEQDFKDAIAI 321
++A ++ +
Sbjct: 204 ASALRELEKVTGT 216
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 83.0 bits (203), Expect = 3e-19
Identities = 48/274 (17%), Positives = 83/274 (30%), Gaps = 57/274 (20%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+A++FD DGVI ++ H +A+ + D LQ +
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLAD 61
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
K+ + + + I + PG+L+
Sbjct: 62 KKVSAEEFKELA-----------------------KRKNDNYVKMIQDVSPADVYPGILQ 98
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
L+ R + LA +
Sbjct: 99 LLK-----------------------------DLRSNKIKIALASASKNGPFLLERMNLT 129
Query: 247 RVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306
+V KP P I++ AA +G++ + + +EDS G+QA +G +
Sbjct: 130 GYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV- 188
Query: 307 TSSTAEQDFKDAIAIYPDLSNVRLKDL-ELLLQN 339
+D D I I PD S+ L+ L E+ LQ
Sbjct: 189 ---GRPEDLGDDIVIVPDTSHYTLEFLKEVWLQK 219
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 77.2 bits (188), Expect = 4e-17
Identities = 44/269 (16%), Positives = 86/269 (31%), Gaps = 57/269 (21%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
+ A IFD DG++I+SE L +A D + V D + L + +G
Sbjct: 3 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGV------------DISRRNELPDTLGLRI 50
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLR 186
+ + + ++++ + ++ + P
Sbjct: 51 DMVVDLWYARQPWNGPSRQ-------------EVVERVIARAISLVEETRPLLPG----- 92
Query: 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPN 246
E + + L + ++L T+
Sbjct: 93 -------------------------VREAVALCKEQGLLVGLASASPLHMLEKVLTMFDL 127
Query: 247 R-VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-I 304
R + + KP P +Y+ A +LG+ C+ +EDSV G+ A+ A M + +
Sbjct: 128 RDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVV 187
Query: 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333
+ + F A L+ + KDL
Sbjct: 188 PAPEAQNDPRFVLANVKLSSLTELTAKDL 216
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (179), Expect = 1e-15
Identities = 33/271 (12%), Positives = 67/271 (24%), Gaps = 36/271 (13%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAF--------SHFNVRCDPSSQQSLNWDPEFYDV 117
+ ++ D +G + + +H+ L E
Sbjct: 6 EVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAH 65
Query: 118 LQNQIGGGKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGT 177
L + + + + D+ R
Sbjct: 66 LDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMK 125
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVL 237
E V+ + + + AG KV + S+ + + L + + E +D
Sbjct: 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH--------- 176
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR 297
D K + Y A +G S + L + D AA
Sbjct: 177 -----------------FDTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEE 219
Query: 298 AGMAC--VITYTSSTAEQDFKDAIAIYPDLS 326
A + V+ ++ D K ++ S
Sbjct: 220 ADVHVAVVVRPGNAGLTDDEKTYYSLITSFS 250
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.5 bits (176), Expect = 2e-15
Identities = 36/256 (14%), Positives = 73/256 (28%), Gaps = 38/256 (14%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+L+A +FD DGV+ + L + + G
Sbjct: 1 TLRAAVFDLDGVLALPAVFGVLGRTEEA--------------LALPRGLLNDAFQKGGPE 46
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
R E + + L +++ + S + +L
Sbjct: 47 GATTRLMKGEITLSQWIPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISA-RKINRPML 105
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
+ + G A+ + L++ + L C L +++
Sbjct: 106 QAALMLRKKGFTTAILT-------NTWLDDRAERDGLAQLMCELKMHFDFLIE------- 151
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
V KP+P IY L S + + ++D L+ A GM ++
Sbjct: 152 ---------SCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202
Query: 306 YTSSTAEQDFKDAIAI 321
+ TA ++ + I
Sbjct: 203 QDTDTALKELEKVTGI 218
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 72.9 bits (177), Expect = 2e-15
Identities = 36/281 (12%), Positives = 81/281 (28%), Gaps = 49/281 (17%)
Query: 67 LQALIFDCDGVIIESEHLH-RQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
++A+IF G ++ + + + F V + + +G
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLL 48
Query: 126 KPKMRWYFKEHGWPSSTI--FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPG 183
K E +S T+ D ++ + ++ + P G
Sbjct: 49 KIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPR-----YASPING 103
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
V ++ + G K+ + T+ + + +
Sbjct: 104 VKEVIASLRERGIKIGSTTGYTREMMDIVAKEAA-------------------------- 137
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKD-CLVVEDSVIGLQAATRAGMAC 302
+ DDV +P P + A LG+ + + V D+V ++ AGM
Sbjct: 138 LQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWT 197
Query: 303 V-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVVA 342
V + SS ++ + +++ + A
Sbjct: 198 VGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 238
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 64.1 bits (154), Expect = 1e-12
Identities = 42/271 (15%), Positives = 79/271 (29%), Gaps = 57/271 (21%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+IFDCDGV+++SE + Q + + E +
Sbjct: 3 DLIIFDCDGVLVDSEIIAAQVESRLLTEAG----------YPISVEEMGERFAGMTWKNI 52
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
++ + S+++ D D + + I D ++ +
Sbjct: 53 LLQVESEASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICS------- 105
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ +L G
Sbjct: 106 ---------------------------------------NSSSHRLDMMLTKVGLKPYFA 126
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 306
+ + + + KP P I++ A + G+S +VVEDSV G+ A AGM + T
Sbjct: 127 PHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTG 186
Query: 307 TSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337
S T + R++DL ++
Sbjct: 187 ASHTYPSHADRLTDAGAETVISRMQDLPAVI 217
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 61.3 bits (147), Expect = 8e-12
Identities = 36/247 (14%), Positives = 67/247 (27%), Gaps = 54/247 (21%)
Query: 71 IFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMR 130
IFD VI++ + + L+ G+ +
Sbjct: 4 IFDLGNVIVDIDFNRVLGAWSDLTRIP-----------------LASLKKSFHMGEAFHQ 46
Query: 131 WYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDE 190
E G S F + + + V RP V+ +M +
Sbjct: 47 H---ERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVF--------VALRPEVIAIMHK 95
Query: 191 AKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCV 250
+ G +V V S + E + D S
Sbjct: 96 LREQGHRVVVLSNTNRLHTTFWPEEYPEIR-----DAADHIYLS---------------- 134
Query: 251 CAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310
D+ +KP+ IY + G S D + +D+ ++ A + G+ ++ +T
Sbjct: 135 -----QDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTT 189
Query: 311 AEQDFKD 317
F
Sbjct: 190 IPDYFAK 196
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 62.9 bits (152), Expect = 1e-11
Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 28/176 (15%)
Query: 180 PRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMT 239
P V L+++ K AG ++ + + + ++ ENL + FE A
Sbjct: 216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDV------ 269
Query: 240 NGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISE--------------KDCLVV 285
+ KP+P Y+ A + D +V
Sbjct: 270 --------LEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIV 321
Query: 286 EDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341
DS+ L +A + G + T T + + A + D L +L +L N++
Sbjct: 322 GDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLL 377
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 61.0 bits (146), Expect = 2e-11
Identities = 27/272 (9%), Positives = 66/272 (24%), Gaps = 49/272 (18%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
++FD DG +++ E ++R+ DA +D G +
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGT---------EGSTGSHDFSGKMDGAI---I 52
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
G + A D ++ +++ + + GV L+D
Sbjct: 53 YEVLSNVGLE-----------RAEIADKFDKAKETYIALFRERARREDITLLEGVRELLD 101
Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249
+ + + L G
Sbjct: 102 ALSSRSDVLLGLLTGNFE-----------------------ASGRHKLKLPGIDHYFPFG 138
Query: 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309
A D + S +++ D+ ++ A + T +
Sbjct: 139 AFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGN 198
Query: 310 TAEQDFKDAIAIYPDLSNVRLKDLELLLQNVV 341
++ P + + +L +++
Sbjct: 199 FTMEELARH---KPGTLFKNFAETDEVLASIL 227
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 60.6 bits (145), Expect = 2e-11
Identities = 36/274 (13%), Positives = 73/274 (26%), Gaps = 41/274 (14%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A+ FD D +I++ R+ + + + + D + +
Sbjct: 7 RAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYST 66
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ H + + L + + + + V
Sbjct: 67 CITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQH---------MILADDVKA- 116
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
L L R L +
Sbjct: 117 ------------------------MLTELRKEVR---LLLLTNGDRQTQREKIEACACQS 149
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITY 306
G + K++KP PSI+ LG+ DC++V D++ +Q AG+ +
Sbjct: 150 YFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWI 209
Query: 307 TSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340
S + P + +L LLQ++
Sbjct: 210 NKS---GRVPLTSSPMPHYMVSSVLELPALLQSI 240
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.8 bits (143), Expect = 4e-11
Identities = 30/262 (11%), Positives = 64/262 (24%), Gaps = 39/262 (14%)
Query: 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGG 124
+ + D +G + + + + P Q D ++L
Sbjct: 1 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKV-----PQLVQQDTRDSPVSNILSQFHID 55
Query: 125 GKPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGV 184
K +++ + E D L L Y+ V
Sbjct: 56 NKEQLQAHILELVA-----------KDVKDPILKQLQGYVWAHGYESGQIKAPVYADA-- 102
Query: 185 LRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLM 244
+ + K + A K + L+ +
Sbjct: 103 IDFIKRKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY---------------- 146
Query: 245 PNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304
+ + + KK + Y + +G + L + D+ + L AA G+A +
Sbjct: 147 -----IDGYFDINTSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGL 201
Query: 305 TYTSSTAEQDFKDAIAIYPDLS 326
A +Y +
Sbjct: 202 ASRPGNAPVPDGQKYQVYKNFE 223
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 59.4 bits (142), Expect = 4e-11
Identities = 24/260 (9%), Positives = 60/260 (23%), Gaps = 63/260 (24%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
A I+D DG +++S + F+ F+ + +D E +
Sbjct: 3 AFIWDLDGTLLDSYEAILSGIEETFAQFS----------IPYDKEKVREFIFKYSVQDLL 52
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+R + +++ + + + + P
Sbjct: 53 VRVAEDRNLDV-------------------EVLNQVRAQSLAEKNAQVVLMPG------- 86
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
E L + + L
Sbjct: 87 -----------------------AREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESY 123
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITYT 307
+KP P + ++ + + D + ++ A +G+ + +
Sbjct: 124 FTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLES 183
Query: 308 SSTAE---QDFKDAIAIYPD 324
+ Q D I+
Sbjct: 184 TYEGNHRIQALADISRIFET 203
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 57.2 bits (136), Expect = 2e-10
Identities = 29/263 (11%), Positives = 68/263 (25%), Gaps = 61/263 (23%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+ QAL+FD DG + S+ + + + + + P
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATYG----------KPFSPAQAQKTFPMAAEQ 51
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+++ + DQ +L I + ++
Sbjct: 52 AMTELGIAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRL----------- 100
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
+ ++ + +
Sbjct: 101 ----------------------------------------GIVTSQRRNELESGMRSYPF 120
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT 305
DD ++KPDP +TA +++ ++ ++ L + DSV Q A A + +
Sbjct: 121 MMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLA 180
Query: 306 YTSSTAEQDFKDAIAIYPDLSNV 328
D + + ++
Sbjct: 181 VWGMDPNADHQKVAHRFQKPLDI 203
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 56.7 bits (135), Expect = 5e-10
Identities = 40/291 (13%), Positives = 73/291 (25%), Gaps = 69/291 (23%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+A++FD G + + + + A A+ P + + +
Sbjct: 3 KAVVFDAYGTLFDVQSVAD-ATERAY------------------PGRGEYITQVWRQKQL 43
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ W G D VT + A + + E + + P
Sbjct: 44 EYSWLRALMGR----YADFWSVTREALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAA 99
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
A+ A K A+ S +
Sbjct: 100 QCLAELAPLKRAILSNG---------------------------APDMLQALVANAGLTD 132
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV---- 303
D + KP P Y + LG++ + L V + + A G +
Sbjct: 133 SFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192
Query: 304 ---------------ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339
T A + ++ A PD L DL L++
Sbjct: 193 LSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLVRG 243
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 52.6 bits (124), Expect = 1e-08
Identities = 41/271 (15%), Positives = 67/271 (24%), Gaps = 51/271 (18%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD DG ++ S + N A N+
Sbjct: 5 KLIGFDLDGTLVNSLPDLALSINSALKDVNLPQ---------ASENLVMTWIGNGADVLS 55
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ + D + Y P V
Sbjct: 56 QRAVDWACKQAEKELTEDEFK------------YFKRQFGFYYGENLCNISRLYPNVKET 103
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
++ KA G +AV + V L G+D ++
Sbjct: 104 LEALKAQGYILAVVTNKPTKHVQPILTAF-------GIDHLFSEM--------------- 141
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 307
G + + KP P+ + + G+ K L V DS + AA AG A V
Sbjct: 142 -----LGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 196
Query: 308 SSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
+ PD D+ + Q
Sbjct: 197 GYNYNIPIAQS---KPDWIFDDFADILKITQ 224
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 52.6 bits (124), Expect = 1e-08
Identities = 35/262 (13%), Positives = 63/262 (24%), Gaps = 49/262 (18%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
+ + FD G + + + + ++AF W + + + +
Sbjct: 3 KGIAFDLYGTLFDVHSVVGRC-DEAFPGRGREISAL------WRQKQLEYTWLRSLMNRY 55
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
E + + ++ L D P V
Sbjct: 56 VNFQQATEDALRFTCRHLGLDLDARTRSTLCDAYLRL--------------APFSEVPDS 101
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ E K G K+A+ S +
Sbjct: 102 LRELKRRGLKLAILSN---------------------------GSPQSIDAVVSHAGLRD 134
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV-ITY 306
D V+ KPD +Y A + LG+ L V + A G I
Sbjct: 135 GFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 194
Query: 307 TSSTAEQDFKDAIAIYPDLSNV 328
T + E+ + L V
Sbjct: 195 TGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 50.5 bits (119), Expect = 3e-08
Identities = 27/250 (10%), Positives = 59/250 (23%), Gaps = 67/250 (26%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
I+D G ++++ AF + V Q
Sbjct: 4 HDYIWDLGGTLLDNYE----TSTAAFVET--------LALYGITQDHDSVYQALKVSTPF 51
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ + ++ + E + ++ +
Sbjct: 52 AIETFAPN----------------------LENFLEKYKENEARELEHPILFEG------ 83
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+ L + G ++ VL
Sbjct: 84 ------------------------VSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIAA 119
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYT 307
++KP+P + ++ IS LV+ D I ++A AG+ + +T
Sbjct: 120 YFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHL-FT 176
Query: 308 SSTAEQDFKD 317
S + D
Sbjct: 177 SIVNLRQVLD 186
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 50.0 bits (118), Expect = 8e-08
Identities = 29/268 (10%), Positives = 64/268 (23%), Gaps = 64/268 (23%)
Query: 70 LIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM 129
+I D DG I ++ + F P + L++ + +
Sbjct: 7 IICDFDGTITMND-----NIINIMKTFA--------------PPEWMALKDGVLSKTLSI 47
Query: 130 RWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMD 189
+ + L+ E + + R G +
Sbjct: 48 KEGVGR---------------------MFGLLPSSLKEEITSFVLE-DAKIREGFREFVA 85
Query: 190 EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249
V S V LE ++ +R + + +
Sbjct: 86 FINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDN--------------DYIH 131
Query: 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSS 309
+ + L + +++ DSV ++AA + + Y +
Sbjct: 132 IDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLN 191
Query: 310 TAE---------QDFKDAIAIYPDLSNV 328
QDF + ++ V
Sbjct: 192 ECREQNLNHLPYQDFYEIRKEIENVKEV 219
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.7 bits (110), Expect = 6e-07
Identities = 24/190 (12%), Positives = 45/190 (23%), Gaps = 48/190 (25%)
Query: 143 IFD-----NPPVTDDDQAKLIDLIQDWK-TERYQQIIKSGTVEPRPGVLRLMDEAKAAGK 196
+FD P D D +R Q I+ P V ++ ++ G
Sbjct: 9 VFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQ-----LYPEVPEVLGRLQSLGV 63
Query: 197 KVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256
VA S + + + +
Sbjct: 64 PVAAAS-------------------------------RTSEIQGANQLLELFDLGKYFIQ 92
Query: 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVIT---YTSSTAEQ 313
+ + + G+ + +D + R G+ C+ + T Q
Sbjct: 93 REIYPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQ 152
Query: 314 ---DFKDAIA 320
F A A
Sbjct: 153 GLETFAKAQA 162
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 46.4 bits (108), Expect = 1e-06
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
S+ A+ FD DG +++S A+ F V P ++ + +
Sbjct: 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVP-SPDAKTIRGFMGPPLESSFATCLSK 61
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWK 165
+ + + L +L +
Sbjct: 62 DQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYP 101
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 45.6 bits (106), Expect = 3e-06
Identities = 33/266 (12%), Positives = 72/266 (27%), Gaps = 49/266 (18%)
Query: 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGK 126
++A+ FD G ++ E + ++ + N G
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 127 PKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQI---IKSGTVEPRPG 183
+R + ++ KL + E + +I + E P
Sbjct: 62 RPIR-----------------DIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPE 104
Query: 184 VLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTL 243
V+ ++ K + Y++ L
Sbjct: 105 VVEVLKSLKGKYHVGMITD----------------------------SDTEYLMAHLDAL 136
Query: 244 MPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMAC 302
+ ++ KP P I+ A K+ G+ ++ + V D+ + + GM
Sbjct: 137 GIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTS 196
Query: 303 VITYTSSTAEQDFKDAIAIYPDLSNV 328
++ + + I DL V
Sbjct: 197 ILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 44.6 bits (104), Expect = 5e-06
Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 5/162 (3%)
Query: 172 IIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLAD 231
+ RP +L + A AG V V + + + + L+ +
Sbjct: 41 PSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREE 100
Query: 232 CQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG 291
++ V A D +KP+P + V A KRL + + L+V D +
Sbjct: 101 GVFVDMVLACAYHEAGVGPLAIP--DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLAD 158
Query: 292 LQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDL 333
+QA RAG+A E + AI P + L DL
Sbjct: 159 MQAGKRAGLAQGWLVDG---EAAVQPGFAIRPLRDSSELGDL 197
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Score = 42.4 bits (98), Expect = 4e-05
Identities = 33/271 (12%), Positives = 81/271 (29%), Gaps = 19/271 (7%)
Query: 69 ALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPK 128
I D DG + L + ++L + + N
Sbjct: 9 LFILDMDGTFYLDDSLLPGS-------------LEFLETLKEKNKRFVFFTN--NSSLGA 53
Query: 129 MRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLM 188
+ K D + + A+ + ++ + R + + ++
Sbjct: 54 QDYVRKLRNMGVDVPDDAVVTSGEITAEHM--LKRFGRCRIFLLGTPQLKKVFEAYGHVI 111
Query: 189 DEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248
DE + T + L + + + + + + +
Sbjct: 112 DEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAI 171
Query: 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYT 307
+ D+ KP+P + +++ G+ ++ +V D + ++ AG+ ++ T
Sbjct: 172 EASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLT 231
Query: 308 SSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338
T +D + A PD L +L +Q
Sbjct: 232 GETTPEDLERA-ETKPDFVFKNLGELAKAVQ 261
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 41.0 bits (95), Expect = 5e-05
Identities = 15/126 (11%), Positives = 37/126 (29%), Gaps = 9/126 (7%)
Query: 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVL 237
+ PGV+ + + + AG K+ + + + + +
Sbjct: 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSF---------PQADFDGPHNLMMQIF 79
Query: 238 MTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATR 297
+ G + D+ +KP + + + V+ D +Q A
Sbjct: 80 TSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAEN 139
Query: 298 AGMACV 303
G+ +
Sbjct: 140 MGINGL 145
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 40.8 bits (94), Expect = 1e-04
Identities = 33/259 (12%), Positives = 71/259 (27%), Gaps = 19/259 (7%)
Query: 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP 127
Q + D DG I + + P + N V Q
Sbjct: 3 QGYLIDLDGTIYLGKEPIPAG-KRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDI 61
Query: 128 KMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRL 187
+ + ++ + + K+ + + + + V+
Sbjct: 62 HVPASLV---YTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVG 118
Query: 188 MDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNR 247
+D + K V A K ++ + + GL ++
Sbjct: 119 LDTELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTF------------ 166
Query: 248 VCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVITY 306
A Q V KP I A LG+ ++ ++V D+ +Q+ + G+ ++
Sbjct: 167 -VETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT 225
Query: 307 TSSTAEQDFKDAIAIYPDL 325
+ T + P
Sbjct: 226 SGFTPKSAVPTL-PTPPTY 243
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 40.8 bits (94), Expect = 1e-04
Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 19/270 (7%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+ + + D DG I + + D R P Y ++ N
Sbjct: 1 TYKGYLIDLDGTIYKGKDRIPAG-EDFVKRLQERQLP------------YILVTN----N 43
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
+ +E S I ID + D K + +I ++
Sbjct: 44 TTRTPEMVQEMLATSFNIKTPLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEA 103
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
++++ V + I + + + G
Sbjct: 104 GYREDSENPAYVVVGLDTNLTYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAI 163
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVI 304
+ A + + KP+ I A RLG+ + ++V D+ + A + +A ++
Sbjct: 164 LFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLL 223
Query: 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334
T T ++ I PD L + +
Sbjct: 224 VTTGFTKPEEVPAL-PIQPDFVLSSLAEWD 252
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 37.0 bits (84), Expect = 0.002
Identities = 27/272 (9%), Positives = 67/272 (24%), Gaps = 24/272 (8%)
Query: 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGG 125
+++ +I D DGV++ A + + P + D+ G
Sbjct: 2 TIKNVICDIDGVLMHDNVAVPGAA-EFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG 60
Query: 126 KPKMRWYFKEHGWPSSTIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVL 185
F ++ LI + + I G
Sbjct: 61 VDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELY-KAGFTITDVNPDFVIVGET 119
Query: 186 RLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245
R + V + N R C +
Sbjct: 120 RSYNWDMMHKAAYFVA-----NGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYV 174
Query: 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIG-LQAATRAGMACVI 304
+ + K + ++ ++V D++ + A +AG+ ++
Sbjct: 175 GKPSPWIIRAALNKMQAHS---------------EETVIVGDNLRTDILAGFQAGLETIL 219
Query: 305 TYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336
+ ++ D P + +++++
Sbjct: 220 VLSGVSSLDDIDSM-PFRPSWIYPSVAEIDVI 250
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 344 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.98 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.97 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.97 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.96 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.95 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.95 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.94 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.94 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.94 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.94 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.92 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.92 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.89 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.89 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.87 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.85 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.8 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.8 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.79 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.78 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.76 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.76 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.76 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.72 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.72 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.67 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.6 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.56 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.54 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.39 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.29 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.29 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.23 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.18 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.18 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.07 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.04 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.96 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.92 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.91 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.83 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.75 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.69 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.57 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.44 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.4 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.39 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.37 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.16 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.11 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.77 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.29 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.1 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 92.38 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 91.5 | |
| d1xm3a_ | 251 | Thiazole biosynthesis protein ThiG {Bacillus subti | 89.0 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 85.83 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 82.67 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 82.16 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 80.79 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=2.9e-31 Score=230.24 Aligned_cols=214 Identities=23% Similarity=0.366 Sum_probs=165.1
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 144 (344)
.+|+||||+||||+|+...+.+++.+++.++|++.+.. .++....+........ .....++.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~----- 64 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRR------------NELPDTLGLRIDMVVDLWYARQPWN----- 64 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGG------------GGSCCCTTCCHHHHHHHHHHHSCCS-----
T ss_pred cceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHH------------HHHHHHhCCCccchhhhhhhccccc-----
Confidence 58999999999999999999999999999999875431 1223333333333222 22233332
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
........+.+...+.+.+.. ...++||+.++|+.|+++|++++|+||+....++..++.+ ++..+
T Consensus 65 ------~~~~~~~~~~~~~~~~~~~~~-----~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~-~l~~~-- 130 (218)
T d1te2a_ 65 ------GPSRQEVVERVIARAISLVEE-----TRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF-DLRDS-- 130 (218)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred ------chhHHHHHHHHHHHHHHhhhc-----cccccchHHHHHHHhhhccccccccccccccccccccccc-ccccc--
Confidence 122223333333333333322 2568999999999999999999999999999999999997 88777
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++.+||+|++|..+++++|++|++|+||||+.+|+.+|+++|+.+|+
T Consensus 131 F~~i~~------------------------~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~ 186 (218)
T d1te2a_ 131 FDALAS------------------------AEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIV 186 (218)
T ss_dssp CSEEEE------------------------CTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred cccccc------------------------ccccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEE
Confidence 789988 99999999999999999999999999999999999999999999999999
Q ss_pred EeCCCchhh-hccccccccCCccccCHHHHH
Q 019226 305 TYTSSTAEQ-DFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 305 v~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~ 334 (344)
|+.+....+ ....++++++++.++.+++|.
T Consensus 187 v~~~~~~~~~~~~~a~~~i~~l~el~~~~l~ 217 (218)
T d1te2a_ 187 VPAPEAQNDPRFVLANVKLSSLTELTAKDLL 217 (218)
T ss_dssp CCCTTTTTCGGGGGSSEECSCGGGCCHHHHH
T ss_pred ECCCCCccchhhcCCCEEECChhhCCHhhcC
Confidence 977655443 346689999999999887764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.97 E-value=8.7e-31 Score=225.79 Aligned_cols=203 Identities=16% Similarity=0.265 Sum_probs=159.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|.+|+|+||+||||+|+...+.++|.+++.++|.+... +++...++... .+.+.+.+.+.
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~~~~~---~~~~~~~~~~~---- 60 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSP-------------AQAQKTFPMAA---EQAMTELGIAA---- 60 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCH-------------HHHHHHTTSCH---HHHHHHTTCCG----
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHhcchh---hhhhhccccch----
Confidence 46899999999999999999999999999999987543 23334444432 34445554331
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
...+ .+.+.+.+.+.+.. ....++||+.++|+.|++ +++++|+||+....++..++.+ ++..+
T Consensus 61 -------~~~~----~~~~~~~~~~~~~~--~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~-~l~~~-- 123 (207)
T d2hdoa1 61 -------SEFD----HFQAQYEDVMASHY--DQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSY-PFMMR-- 123 (207)
T ss_dssp -------GGHH----HHHHHHHHHHTTCG--GGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTS-GGGGG--
T ss_pred -------hhHH----HHHHHhhhhhcccc--cccccccchhhhhhhhcc-cccccccccccccccccccccc-ccccc--
Confidence 2222 22333333333332 246799999999999975 6999999999999999999997 77776
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++.+.+||+|++|..+++++|++|++|+||||+.+|+++|+++||.+|+
T Consensus 124 f~~i~~------------------------~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~ 179 (207)
T d2hdoa1 124 MAVTIS------------------------ADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179 (207)
T ss_dssp EEEEEC------------------------GGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred cccccc------------------------ccccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEE
Confidence 688888 88889999999999999999999999999999999999999999999999
Q ss_pred EeCCCchhhhccccccccCCcccc
Q 019226 305 TYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 305 v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
+.++......+..+.+++.++.++
T Consensus 180 v~~g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 180 AVWGMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp EGGGCCTTGGGSCCSEEESSGGGG
T ss_pred EecCCCChhHhhhcCcEeCCHHHH
Confidence 998888877777777777665544
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.97 E-value=1.3e-29 Score=220.17 Aligned_cols=217 Identities=23% Similarity=0.384 Sum_probs=164.1
Q ss_pred CccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHH-cCCCCcccc
Q 019226 66 SLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKE-HGWPSSTIF 144 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 144 (344)
|+|+|+||+||||+|+...+.+++.+++.++|++... . .......+.+.......+.+ .+..
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~~~----- 63 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVD---------R---QFNEQLKGVSREDSLQKILDLADKK----- 63 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCC---------H---HHHTTTTTCCHHHHHHHHHTTSSSC-----
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCCh---------H---HHHHHHhhccchhhhhhcccccccc-----
Confidence 6899999999999999999999999999999987654 1 11222234444433333222 2211
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHh-CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKS-GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
.+.+. ...+.+.+.+.|.+.+.. ....++||+.++|+.|++.|++++++||+.. ....++.+ ++..+
T Consensus 64 ----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~-~l~~~- 131 (221)
T d1o08a_ 64 ----VSAEE----FKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERM-NLTGY- 131 (221)
T ss_dssp ----CCHHH----HHHHHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHT-TCGGG-
T ss_pred ----chhhh----hhhHHHHHHhhccccccccccccccCCceeccccccccccceEEEeecch--hhHHHHhh-ccccc-
Confidence 22222 233344444555554332 2457999999999999999999999999755 56777776 77766
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.+++ +++.+.+||+|++|+.+++++|++|++|+||||+.+|+++|+++||.+|
T Consensus 132 -f~~i~~------------------------~~~~~~~KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i 186 (221)
T d1o08a_ 132 -FDAIAD------------------------PAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPI 186 (221)
T ss_dssp -CSEECC------------------------TTTSSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -cccccc------------------------cccccccccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEE
Confidence 688888 8899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 304 ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 304 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+|.++. ........++++.+.++++|.+++.+.
T Consensus 187 ~v~~~~----~~~~~~~~~~~~~~~~~~~l~el~~~~ 219 (221)
T d1o08a_ 187 GVGRPE----DLGDDIVIVPDTSHYTLEFLKEVWLQK 219 (221)
T ss_dssp EESCHH----HHCSSSEEESSGGGCCHHHHHHHHHSS
T ss_pred EECChh----hcccccEEcCCcccCCHHHHHHHHHhc
Confidence 997643 233456678999999999999987653
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=4.4e-29 Score=216.58 Aligned_cols=216 Identities=20% Similarity=0.243 Sum_probs=160.6
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHH-HHHHcCCCCcc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRW-YFKEHGWPSST 142 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~ 142 (344)
|..+|+|+||+||||+|+...+.+++.++++++|.+... .+.++...+........ .+......
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~--- 65 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQAS------------ENLVMTWIGNGADVLSQRAVDWACKQ--- 65 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCC------------HHHHHHHCSSCHHHHHHHHHHHHHHH---
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCc------------HHHHHHHhhhhhhhhhhhhhhhhhhh---
Confidence 356899999999999999999999999999999986554 33455555554433211 11111000
Q ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchh
Q 019226 143 IFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERF 222 (344)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~ 222 (344)
. ........ ...........+... ......++||+.++|+.|+++|++++++||+....++..++.+ ++..+
T Consensus 66 -~-~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~-gl~~~ 137 (224)
T d2hsza1 66 -A-EKELTEDE----FKYFKRQFGFYYGEN-LCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAF-GIDHL 137 (224)
T ss_dssp -H-TCCCCHHH----HHHHHHHHHHHHHHH-TTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TCGGG
T ss_pred -h-hhhhhHHH----HHHHHHHHHHHHHHh-hccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhc-Cchhh
Confidence 0 00011111 112222222222222 2245789999999999999999999999999999999999997 88877
Q ss_pred cccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 223 EGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 223 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.+++ +++.+..||+|++|..+++++++++++|+||||+.+|+++|+++|+.+
T Consensus 138 --f~~~~~------------------------~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~ 191 (224)
T d2hsza1 138 --FSEMLG------------------------GQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAV 191 (224)
T ss_dssp --CSEEEC------------------------TTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred --cccccc------------------------ccccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeE
Confidence 788888 899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCchhhhcc--ccccccCCcccc
Q 019226 303 VITYTSSTAEQDFK--DAIAIYPDLSNV 328 (344)
Q Consensus 303 v~v~~~~~~~~~l~--~~~~~~~~~~~~ 328 (344)
|++.++......+. .+++++.++.++
T Consensus 192 i~v~~g~~~~~~l~~~~~d~~v~~l~dL 219 (224)
T d2hsza1 192 VGLTYGYNYNIPIAQSKPDWIFDDFADI 219 (224)
T ss_dssp EEESSSCSTTCCGGGGCCSEEESSGGGG
T ss_pred EEEeCCCCCcchhhhcCCCEEECCHHHH
Confidence 99998877655543 466777776654
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.96 E-value=1.3e-28 Score=218.95 Aligned_cols=200 Identities=19% Similarity=0.263 Sum_probs=144.0
Q ss_pred CccEEEEecCccccccchh-HHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHc-CCC--Cc
Q 019226 66 SLQALIFDCDGVIIESEHL-HRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEH-GWP--SS 141 (344)
Q Consensus 66 ~~k~viFD~DGTL~d~~~~-~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~--~~ 141 (344)
++|+|+||+||||+|+... ...++.+++.++|++.+. +++...+|.......+.+... ... ..
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 67 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITA-------------EEARKPMGLLKIDHVRALTEMPRIASEWN 67 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCH-------------HHHHTTTTSCHHHHHHHHHHSHHHHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCH-------------HHHHHHhCCcHHHHHHHHhhhhhhhHHHH
Confidence 4799999999999998654 478899999999987653 233444443322211111000 000 00
Q ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccch
Q 019226 142 TIFDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMER 221 (344)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~ 221 (344)
.++.. .....+ .+.+...+.+.+...+. ....++||+.++|+.|+++|++++|+||++...++..++.+ ++..
T Consensus 68 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~-~l~~ 140 (257)
T d1swva_ 68 RVFRQ-LPTEAD----IQEMYEEFEEILFAILP-RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEA-ALQG 140 (257)
T ss_dssp HHHSS-CCCHHH----HHHHHHHHHHHHHHHGG-GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHH-HHTT
T ss_pred HHhcc-cCCHHH----HHHHHHHHHHHHHHHhh-ccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHH-hhcc
Confidence 00100 011112 23334444444444433 33589999999999999999999999999999999999997 7776
Q ss_pred hcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCC-CCcEEEEecCHhhHHHHHHcCC
Q 019226 222 FEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGIS-EKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 222 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~-~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
+. +|.+++ +++++.+||+|++|..+++++|+. +++|+||||+.+|+.+|+++||
T Consensus 141 ~f-~d~~~~------------------------~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 141 YK-PDFLVT------------------------PDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp CC-CSCCBC------------------------GGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred cc-cccccc------------------------cccccccccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 52 477777 889999999999999999999995 5999999999999999999999
Q ss_pred eEEEEeCCCc
Q 019226 301 ACVITYTSST 310 (344)
Q Consensus 301 ~~v~v~~~~~ 310 (344)
.+|+|.++..
T Consensus 196 ~ti~v~~G~~ 205 (257)
T d1swva_ 196 WTVGVILGSS 205 (257)
T ss_dssp EEEEECTTCT
T ss_pred EEEEEccCCC
Confidence 9999988864
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.95 E-value=7.3e-28 Score=210.25 Aligned_cols=218 Identities=14% Similarity=0.235 Sum_probs=159.5
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhc-CCCCCCCccCCCCCChHHHHHHHHhhCCChh-hHHHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHF-NVRCDPSSQQSLNWDPEFYDVLQNQIGGGKP-KMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~ 144 (344)
.|+|+||+||||+++...+.+++.+++.+. |....... ....+.... ...+++..++++.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~---- 63 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGS--------------HDFSGKMDGAIIYEVLSNVGLER---- 63 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC-----------------CCTTCCHHHHHHHHHHTTTCCH----
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHH--------------HHHhcCchHHHHHHHHHHhCCCh----
Confidence 579999999999999999999999988874 54433211 011122111 2344555554431
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcC-CeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAG-KKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
....+..+...+.+...+.+........++||+.++|+.|+++| ++++|+||+....+...++.+ ++..+
T Consensus 64 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~-gl~~~- 134 (228)
T d2hcfa1 64 -------AEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLP-GIDHY- 134 (228)
T ss_dssp -------HHHHHHHHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTT-TCSTT-
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhh-ccccc-
Confidence 22222233344444444555443445688999999999999997 899999999999999999987 88887
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHc---CCCCCcEEEEecCHhhHHHHHHcCC
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRL---GISEKDCLVVEDSVIGLQAATRAGM 300 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~l---gv~~~~~i~vGDs~~Di~~a~~aG~ 300 (344)
|+.+++ +++....||+|.++...++.+ +++|++|+||||+.+|+.+|+++||
T Consensus 135 -fd~i~~------------------------~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~ 189 (228)
T d2hcfa1 135 -FPFGAF------------------------ADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDA 189 (228)
T ss_dssp -CSCEEC------------------------TTTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred -cccccc------------------------ccccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCC
Confidence 788888 889998999999888777666 7899999999999999999999999
Q ss_pred eEEEEeCCCchhhhcc--ccccccCCccccCHHHHHHHHHHhh
Q 019226 301 ACVITYTSSTAEQDFK--DAIAIYPDLSNVRLKDLELLLQNVV 341 (344)
Q Consensus 301 ~~v~v~~~~~~~~~l~--~~~~~~~~~~~~~~~~l~~ll~~~~ 341 (344)
.+|+|.++....+++. +++++++++. +|.++|+.++
T Consensus 190 ~~i~v~~g~~~~~~l~~~~ad~vi~~~~-----el~~~l~~l~ 227 (228)
T d2hcfa1 190 RSIAVATGNFTMEELARHKPGTLFKNFA-----ETDEVLASIL 227 (228)
T ss_dssp EEEEECCSSSCHHHHHTTCCSEEESCSC-----CHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHhhCCCCEEECCHH-----HHHHHHHHHh
Confidence 9999998887777664 4677777665 4555555543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=7.6e-28 Score=206.57 Aligned_cols=183 Identities=14% Similarity=0.276 Sum_probs=138.6
Q ss_pred cEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhH-HHHHHHcCCCCccccCC
Q 019226 68 QALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKM-RWYFKEHGWPSSTIFDN 146 (344)
Q Consensus 68 k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~ 146 (344)
++++||+||||+|+...+.+++++++.++|++... .+. .....+.+.... .++....+..
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~------- 62 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDK---------EKV---REFIFKYSVQDLLVRVAEDRNLD------- 62 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCH---------HHH---HHHHHHSCHHHHHHHHHHHHTCC-------
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH---------HHH---HHhhcccccccccccccchhhhh-------
Confidence 68999999999999999999999999999987543 111 111223333332 2333333221
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccc
Q 019226 147 PPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLD 226 (344)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d 226 (344)
.+.+...+...+... .....++||+.++|+.|+++|++++|+||+... ....++++ ++..+ |+
T Consensus 63 -----------~~~~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~-gl~~~--f~ 125 (204)
T d2go7a1 63 -----------VEVLNQVRAQSLAEK--NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDL-GVESY--FT 125 (204)
T ss_dssp -----------HHHHHHHHHHHHTTC--GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHH-TCGGG--EE
T ss_pred -----------HHHHHHHHHHHHHhh--cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhc-ccccc--cc
Confidence 112222222222221 134688999999999999999999999998764 56678886 88887 78
Q ss_pred eeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEe
Q 019226 227 CFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITY 306 (344)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~ 306 (344)
.+++ +++++..||++++|+.+++++|++|++|+||||+.+|+++|+++||.+|++.
T Consensus 126 ~i~~------------------------s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 126 EILT------------------------SQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL 181 (204)
T ss_dssp EEEC------------------------GGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred cccc------------------------cccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 8888 8888999999999999999999999999999999999999999999999998
Q ss_pred CCCc
Q 019226 307 TSST 310 (344)
Q Consensus 307 ~~~~ 310 (344)
++..
T Consensus 182 ~~~~ 185 (204)
T d2go7a1 182 ESTY 185 (204)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 7643
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=1.8e-27 Score=204.79 Aligned_cols=201 Identities=14% Similarity=0.222 Sum_probs=151.3
Q ss_pred CCCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCccc
Q 019226 64 SQSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTI 143 (344)
Q Consensus 64 ~~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (344)
|.++|+|+||+||||+|+...+..++++++.++|++... .+.++...+.+.... +...
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~------------~~~~~~~~~~~~~~~---~~~~------- 58 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPD------------AKTIRGFMGPPLESS---FATC------- 58 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCC------------HHHHHHTSSSCHHHH---HHTT-------
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCC------------HHHHHHhhhcchhhh---cccc-------
Confidence 356899999999999999999999999999999987544 344555555443322 2211
Q ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhc
Q 019226 144 FDNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFE 223 (344)
Q Consensus 144 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~ 223 (344)
..........+.. ...+.... .....+++|+.++++.|+.+ ++++++||+.....+..++++ ++..+
T Consensus 59 -----~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~-gl~~~- 125 (210)
T d2ah5a1 59 -----LSKDQISEAVQIY----RSYYKAKG-IYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNL-EIHHF- 125 (210)
T ss_dssp -----SCGGGHHHHHHHH----HHHHHHTG-GGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHT-TCGGG-
T ss_pred -----ccchhhHHHHHHH----HHHHHhhh-hhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhh-ccccc-
Confidence 1122222222222 22222221 13468999999999999977 589999999999999999997 88877
Q ss_pred ccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 224 GLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 224 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
|+.++. +++. +||+|++|..+++++|++|++|+||||+.+|+.+|+++|+++|
T Consensus 126 -fd~v~~------------------------~~~~--~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i 178 (210)
T d2ah5a1 126 -FDGIYG------------------------SSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -CSEEEE------------------------ECSS--CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -cccccc------------------------cccc--ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEE
Confidence 688877 6665 6888999999999999999999999999999999999999999
Q ss_pred EEeCCCchhhhccc--cccccCCcc
Q 019226 304 ITYTSSTAEQDFKD--AIAIYPDLS 326 (344)
Q Consensus 304 ~v~~~~~~~~~l~~--~~~~~~~~~ 326 (344)
+|.+|....+++.. +++++.++.
T Consensus 179 ~v~~g~~~~~~l~~~~pd~vi~~l~ 203 (210)
T d2ah5a1 179 AITWGFGEQADLLNYQPDYIAHKPL 203 (210)
T ss_dssp EESSSSSCHHHHHTTCCSEEESSTT
T ss_pred EEcCCCCCHHHHHhCCCCEEECCHH
Confidence 99988877666643 556666544
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.94 E-value=5.3e-27 Score=199.00 Aligned_cols=181 Identities=14% Similarity=0.232 Sum_probs=135.9
Q ss_pred CCccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHHHHhhCCChhhHHHHHHHcCCCCcccc
Q 019226 65 QSLQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVLQNQIGGGKPKMRWYFKEHGWPSSTIF 144 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 144 (344)
|.+|+|+||+||||+|+...+..+|.+++.++|++.+. ..+....+...... +......
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~-------------~~~~~~~~~~~~~~---~~~~~~~----- 59 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDH-------------DSVYQALKVSTPFA---IETFAPN----- 59 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHHHCHHHH---HHHHCTT-----
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccH-------------HHHHhhhhccchhh---hhhhhHH-----
Confidence 56999999999999999999999999999999987543 23333333332222 2221110
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+.+.+.+.+.+...+ ....++||+.++|+.|+++|++++|+||+..... +.++.+ ++..+
T Consensus 60 -------------~~~~~~~~~~~~~~~~--~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~-~l~~~-- 120 (187)
T d2fi1a1 60 -------------LENFLEKYKENEAREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKT-SIAAY-- 120 (187)
T ss_dssp -------------CTTHHHHHHHHHHHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHT-TCGGG--
T ss_pred -------------HHHHHHHHHHHHHHHh--hcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhh-ccccc--
Confidence 0111122222223222 3468999999999999999999999999877655 568776 77766
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
|+.+++ +++++..||+|++|..+++++++ ++|+||||+..|+++|+++|+.+++
T Consensus 121 fd~i~~------------------------~~~~~~~KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~ 174 (187)
T d2fi1a1 121 FTEVVT------------------------SSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHL 174 (187)
T ss_dssp EEEEEC------------------------GGGCCCCTTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEE
T ss_pred cccccc------------------------cccccccCCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEE
Confidence 688888 88889999999999999999997 5699999999999999999999999
Q ss_pred EeCCCch
Q 019226 305 TYTSSTA 311 (344)
Q Consensus 305 v~~~~~~ 311 (344)
+.++...
T Consensus 175 v~~~~~~ 181 (187)
T d2fi1a1 175 FTSIVNL 181 (187)
T ss_dssp CSCHHHH
T ss_pred ECCCCCh
Confidence 8765443
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.94 E-value=6.8e-27 Score=204.42 Aligned_cols=130 Identities=18% Similarity=0.331 Sum_probs=112.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
..++||+.++|+.|+ +|++++++||++....+..++.+ ++..+ |+.+++ +++
T Consensus 99 ~~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------s~~ 150 (230)
T d1x42a1 99 GELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDAL-GIKDL--FDSITT------------------------SEE 150 (230)
T ss_dssp CCBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHH-TCGGG--CSEEEE------------------------HHH
T ss_pred CcccccHHHHHHHhh-ccCceeeeeccccccchhhhccc-ccccc--cccccc------------------------ccc
Confidence 578999999999997 47999999999999999999997 88777 799988 888
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELL 336 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~l 336 (344)
++.+||+|++|..+++++|++|++|+||||+. +|+++|+++||.+|+++++....+....+++++.++ .+|.++
T Consensus 151 ~~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l-----~el~~~ 225 (230)
T d1x42a1 151 AGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDL-----REVIKI 225 (230)
T ss_dssp HTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESST-----THHHHH
T ss_pred ccccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCH-----HHHHHH
Confidence 99999999999999999999999999999996 799999999999999988777665555666666654 556666
Q ss_pred HHHh
Q 019226 337 LQNV 340 (344)
Q Consensus 337 l~~~ 340 (344)
|+++
T Consensus 226 l~~l 229 (230)
T d1x42a1 226 VDEL 229 (230)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6654
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.94 E-value=7e-26 Score=196.45 Aligned_cols=209 Identities=22% Similarity=0.365 Sum_probs=150.2
Q ss_pred ccEEEEecCccccccchhHHHHHHHHHHhcCCCCCCCccCCCCCChHHHHHH-HHhhCCChhhH-HHHHHHcCCCCcccc
Q 019226 67 LQALIFDCDGVIIESEHLHRQAYNDAFSHFNVRCDPSSQQSLNWDPEFYDVL-QNQIGGGKPKM-RWYFKEHGWPSSTIF 144 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~g~~~~~~~ 144 (344)
+|+||||+||||+|+...+.++|.+++.++|++.+. +++ ....+.....+ ..+..+.+.+..
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~--- 65 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISV-------------EEMGERFAGMTWKNILLQVESEASIPLS--- 65 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCH-------------HHHHHHHTTCCHHHHHHHHHHHHCCCCC---
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCH-------------HHHHHHHhhhcccccccccccccccccc---
Confidence 799999999999999999999999999999987543 223 33345555544 334555554321
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc
Q 019226 145 DNPPVTDDDQAKLIDLIQDWKTERYQQIIKSGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG 224 (344)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~ 224 (344)
.+..+.+...+.+.... ...++||+.++|++|+. +.+++||.....+...++.+ ++..+
T Consensus 66 ----------~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~-~l~~~-- 124 (222)
T d2fdra1 66 ----------ASLLDKSEKLLDMRLER-----DVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKV-GLKPY-- 124 (222)
T ss_dssp ----------THHHHHHHHHHHHHHHH-----HCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHT-TCGGG--
T ss_pred ----------ccchhHHHHHHHHHhhh-----ccchhhhHHHHhhhccc---cceeeeecchhhhhhhhccc-ccccc--
Confidence 11222222222222222 36899999999998864 56799999999999999997 77777
Q ss_pred cceeecccchhhhhccCCcCCccccccccCCC--CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE
Q 019226 225 LDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD--DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC 302 (344)
Q Consensus 225 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~ 302 (344)
|+.++.. ++ ....+||+|++|..+++++|++|++|+||||+..|+++|+++||.+
T Consensus 125 f~~~~~~-----------------------~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~ 181 (222)
T d2fdra1 125 FAPHIYS-----------------------AKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRV 181 (222)
T ss_dssp TTTCEEE-----------------------HHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEE
T ss_pred cceeecc-----------------------cccccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEE
Confidence 4554431 23 2456899999999999999999999999999999999999999999
Q ss_pred EEEeCCCchh----hhc--cccccccCCccccCHHHHHHHHHHh
Q 019226 303 VITYTSSTAE----QDF--KDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 303 v~v~~~~~~~----~~l--~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
|++.++.... +.+ .+++.+++++. +|..+|..+
T Consensus 182 i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~-----eL~~ll~~l 220 (222)
T d2fdra1 182 IGFTGASHTYPSHADRLTDAGAETVISRMQ-----DLPAVIAAM 220 (222)
T ss_dssp EEECCSTTCCTTHHHHHHHHTCSEEESCGG-----GHHHHHHHH
T ss_pred EEEccCCCCCcchHHHHHhCCCCEEECCHH-----HHHHHHHHh
Confidence 9998876432 223 23666676655 455555543
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=3.3e-26 Score=201.73 Aligned_cols=132 Identities=20% Similarity=0.356 Sum_probs=107.6
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|+ +|++++++||++....+..++.. ++..+ |+.+++ ++
T Consensus 107 ~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~-gl~~~--fd~i~~------------------------s~ 158 (247)
T d2gfha1 107 HMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEAC-ACQSY--FDAIVI------------------------GG 158 (247)
T ss_dssp TCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHH-TCGGG--CSEEEE------------------------GG
T ss_pred cCccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhc-ccccc--cccccc------------------------cc
Confidence 3689999999999998 57999999999999999999997 78777 688888 88
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEE-EEeCCCchhhhccccccccCCccccCHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACV-ITYTSSTAEQDFKDAIAIYPDLSNVRLKDLE 334 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v-~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 334 (344)
+++.+||+|++|+.+++++|++|++|+||||+. +|+.+|+++||.++ +++........ ....|++..-++.+|.
T Consensus 159 ~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~----~~~~p~~~i~~l~eL~ 234 (247)
T d2gfha1 159 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLT----SSPMPHYMVSSVLELP 234 (247)
T ss_dssp GSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSS----CCCCCSEEESSGGGHH
T ss_pred ccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCccc----ccCCCCEEECCHHHHH
Confidence 999999999999999999999999999999997 79999999999865 44433332211 2233444445667778
Q ss_pred HHHHHh
Q 019226 335 LLLQNV 340 (344)
Q Consensus 335 ~ll~~~ 340 (344)
++|+++
T Consensus 235 ~ll~~i 240 (247)
T d2gfha1 235 ALLQSI 240 (247)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888765
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.92 E-value=4.8e-25 Score=190.54 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=105.1
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...+++++.++++.+++.|++++++||+.....+..++.. ++..+ ||.+++ ++
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~-~~~~~--fd~~~~------------------------s~ 143 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHA-GLRDG--FDHLLS------------------------VD 143 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------SG
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhc-ccccc--ccceee------------------------ee
Confidence 4679999999999999999999999999999999888885 77766 789988 88
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc-cccccccCC
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-KDAIAIYPD 324 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l-~~~~~~~~~ 324 (344)
+.+..||+|++|+.+++++|++|++|+||||+..|+.+|+++||.+||++++......+ ..+++++++
T Consensus 144 ~~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~ 212 (220)
T d1zrna_ 144 PVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS 212 (220)
T ss_dssp GGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS
T ss_pred eeeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC
Confidence 99999999999999999999999999999999999999999999999998776654443 224444443
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=8.6e-24 Score=185.08 Aligned_cols=126 Identities=19% Similarity=0.185 Sum_probs=103.3
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++||+.++|+.|+++|++++|+||+.....+..++.+ ++..+ ++.+... .+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~-~~~~~--~~~~~~~-----------------------~d 178 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS-TEGDI--LELVDGH-----------------------FD 178 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB-TTBCC--GGGCSEE-----------------------EC
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHc-Ccchh--hhhccee-----------------------ec
Confidence 4578999999999999999999999999999888888876 66555 3433330 34
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh--hhccccccccCCcccc
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE--QDFKDAIAIYPDLSNV 328 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~--~~l~~~~~~~~~~~~~ 328 (344)
+....||+|.+|..+++++|++|++|+||||+.+|+.+|+++||++|+|.+++... +....+..++++|.|+
T Consensus 179 ~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 179 TKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp GGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred cccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 55678999999999999999999999999999999999999999999998654432 2224456678888775
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.92 E-value=1e-24 Score=191.47 Aligned_cols=135 Identities=21% Similarity=0.285 Sum_probs=111.5
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...++|++.++|+.|+ ++.++++||+....+...++.. ++..+ ||.+++ ++
T Consensus 91 ~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~-~~~~~--fd~v~~------------------------s~ 141 (245)
T d1qq5a_ 91 RLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANA-GLTDS--FDAVIS------------------------VD 141 (245)
T ss_dssp SCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHT-TCGGG--CSEEEE------------------------GG
T ss_pred ccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhc-ccccc--cccccc------------------------cc
Confidence 4688999999999886 6789999999999899888886 66666 788888 89
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc-------------------cc
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF-------------------KD 317 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l-------------------~~ 317 (344)
+++..||+|++|..+++++|++|++|+||||+.+|+.+|+++||++|||+++....... ..
T Consensus 142 ~~~~~KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (245)
T d1qq5a_ 142 AKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREE 221 (245)
T ss_dssp GGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCC
T ss_pred cccccCccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999998765321110 01
Q ss_pred cccccCCccccCHHHHHHHHHHh
Q 019226 318 AIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 318 ~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
.....||+..-++.+|.++++.+
T Consensus 222 ~~~~~pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 222 TYAEAPDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp TTSCCCSEEESSGGGHHHHHHHH
T ss_pred hccCCCCEEECCHHHHHHHHHhh
Confidence 11234677777788888888765
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=3.3e-24 Score=185.31 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=96.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChh----hHHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKS----SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~----~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
..++||+.++|..|+++|++++++||+... ..+..+... ++..+ ||.+++
T Consensus 96 ~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~-~l~~~--fd~i~~----------------------- 149 (222)
T d1cr6a1 96 RSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMC-ELSQH--FDFLIE----------------------- 149 (222)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHH-HHGGG--CSEEEE-----------------------
T ss_pred CCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhc-ChHhh--hceeee-----------------------
Confidence 589999999999999999999999985432 344444554 66776 799988
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhcc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFK 316 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~ 316 (344)
+++++.+||+|++|..+++++|++|++|+||||+..|+++|+++||.+|+|.++.....+|.
T Consensus 150 -s~~~~~~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el~ 211 (222)
T d1cr6a1 150 -SCQVGMIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALRELE 211 (222)
T ss_dssp -HHHHSCCTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHHH
T ss_pred -hhhccCCCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcchHHHHHH
Confidence 88888999999999999999999999999999999999999999999999988877655554
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=8.8e-23 Score=175.55 Aligned_cols=111 Identities=17% Similarity=0.202 Sum_probs=93.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHH----HHHHhhccchhcccceeecccchhhhhccCCcCCcccccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVIL----CLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAH 253 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~----~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (344)
..++||+.++|..|+++|++++++||........ .... .++..+ ||.+++
T Consensus 98 ~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~-~~~~~~--fd~i~~----------------------- 151 (225)
T d1zd3a1 98 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM-CELKMH--FDFLIE----------------------- 151 (225)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH-HHHHTT--SSEEEE-----------------------
T ss_pred CCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhh-cChHhh--ccEEEe-----------------------
Confidence 5899999999999999999999999976543332 2222 244554 688888
Q ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhc
Q 019226 254 QGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDF 315 (344)
Q Consensus 254 ~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l 315 (344)
+++++.+||+|++|+.+++++|++|++|+||||+..|+++|+++||++|+|.++....+++
T Consensus 152 -s~~~~~~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~~~~l 212 (225)
T d1zd3a1 152 -SCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTALKEL 212 (225)
T ss_dssp -HHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHHHHHH
T ss_pred -ccccccchhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCcchhHHHH
Confidence 8889999999999999999999999999999999999999999999999998766544444
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=8.5e-23 Score=171.65 Aligned_cols=113 Identities=20% Similarity=0.341 Sum_probs=99.3
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
....+++|+.+++..++.+|++++++||+........+..+.++..+ |+.+++ +
T Consensus 81 ~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~--fd~v~~------------------------s 134 (197)
T d2b0ca1 81 VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDA--ADHIYL------------------------S 134 (197)
T ss_dssp CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHH--CSEEEE------------------------H
T ss_pred hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhh--ccceee------------------------c
Confidence 34578999999999999999999999999877777667665567666 688888 8
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhh
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQD 314 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~ 314 (344)
++.+..||+|++|+.+++++|++|++|+||||+.+|+++|+++||++|+|+.+....+.
T Consensus 135 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~~~~~~ 193 (197)
T d2b0ca1 135 QDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKTTIPDY 193 (197)
T ss_dssp HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTTHHHHH
T ss_pred ccccccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCCCCHHh
Confidence 88899999999999999999999999999999999999999999999999877654443
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=4.2e-21 Score=159.01 Aligned_cols=102 Identities=13% Similarity=0.200 Sum_probs=84.8
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhh-HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSS-VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~-~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
.+.++||+.++|+.|+++|++++|+||+.... .+..++.+ ++..+ ++.+..
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~-~~~~~--~~~~~~------------------------- 95 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELF-DLGKY--FIQREI------------------------- 95 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHT-TCGGG--CSEEEE-------------------------
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcc-ccccc--ceeeec-------------------------
Confidence 36899999999999999999999999887644 44455554 54444 232222
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
..||+|+.|..+++++|++|++|+||||+..|+++|+++|+.+|+|.++.+
T Consensus 96 ----~~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~~ 146 (164)
T d1u7pa_ 96 ----YPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMS 146 (164)
T ss_dssp ----SSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCCC
T ss_pred ----ccCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC
Confidence 368999999999999999999999999999999999999999999988864
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=6.2e-21 Score=164.30 Aligned_cols=119 Identities=15% Similarity=0.304 Sum_probs=83.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh----------hccchhcccceeecccchhhhhccCCcCCccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL----------IGMERFEGLDCFLADCQSYVLMTNGTLMPNRV 248 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 248 (344)
.+++++.+++. .+.++++.++............. .++..+ |+.+++
T Consensus 97 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--Fd~v~~------------------ 152 (225)
T d2g80a1 97 PVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSY--IDGYFD------------------ 152 (225)
T ss_dssp CCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGG--CCEEEC------------------
T ss_pred cchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccc--cceeee------------------
Confidence 45555555554 45678888887765443332211 144444 566655
Q ss_pred cccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 249 CVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 249 ~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
++. ...||+|++|..+++++|++|++|+||||+.+|+.+|+++||.+|+|+++.........+..++.+|.++
T Consensus 153 ------~~~-~~~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 153 ------INT-SGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp ------HHH-HCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ------ccc-cCCCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 443 3479999999999999999999999999999999999999999999987654433223344456776654
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=2e-19 Score=151.33 Aligned_cols=132 Identities=21% Similarity=0.272 Sum_probs=90.6
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh--------HHHHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS--------VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~--------~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
++++||+.++|+.|+++|++++++||...-. ...+...+ ... ............
T Consensus 26 ~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~---------~~~---------~~~~~~~~~~~~ 87 (182)
T d2gmwa1 26 FEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWM---------DWS---------LADRDVDLDGIY 87 (182)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHH---------HHH---------HHHTTCCCSEEE
T ss_pred eeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhh---------hhh---------hhhhccccccee
Confidence 6899999999999999999999999976421 11111000 000 000001112233
Q ss_pred ccccCC--------CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeE-EEEeCCCchhhhc-cccc
Q 019226 250 VCAHQG--------DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMAC-VITYTSSTAEQDF-KDAI 319 (344)
Q Consensus 250 ~~~~~~--------~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~-v~v~~~~~~~~~l-~~~~ 319 (344)
+|+|.. .+...+||+|.++..+++++++++++++||||+.+|+++|++||+.+ +++.++....+.. ..++
T Consensus 88 ~cp~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad 167 (182)
T d2gmwa1 88 YCPHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 167 (182)
T ss_dssp EECCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCS
T ss_pred ecccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCC
Confidence 454443 34566899999999999999999999999999999999999999975 6676665543333 3467
Q ss_pred cccCCccc
Q 019226 320 AIYPDLSN 327 (344)
Q Consensus 320 ~~~~~~~~ 327 (344)
+++.++.+
T Consensus 168 ~v~~~l~d 175 (182)
T d2gmwa1 168 WVLNSLAD 175 (182)
T ss_dssp EEESCGGG
T ss_pred EEECCHHH
Confidence 77776544
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.80 E-value=1.3e-19 Score=155.66 Aligned_cols=145 Identities=30% Similarity=0.320 Sum_probs=91.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh--------h----hHHHHHHHhhccchhcccceeecccchhhhhccCCcCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK--------S----SVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMP 245 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~--------~----~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 245 (344)
++++||+.++|+.|+++|++++|+||... . ....+.+.+ ..... .++.++.. .+ ..++
T Consensus 47 ~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~-~~~~~~~~--~~--~~~~---- 116 (209)
T d2o2xa1 47 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGV-FVDMVLAC--AY--HEAG---- 116 (209)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTC-CCSEEEEE--CC--CTTC----
T ss_pred eEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhccc-ccceEEEe--cc--cccc----
Confidence 57999999999999999999999999431 1 111122222 11110 02222210 00 0000
Q ss_pred ccccccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCc
Q 019226 246 NRVCVCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDL 325 (344)
Q Consensus 246 ~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~ 325 (344)
.|+....+..++||+|.++..+++++++++++|+||||+..|+++|++|||.++++.++....+. .+.+.++
T Consensus 117 ----~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~----~~~~~~~ 188 (209)
T d2o2xa1 117 ----VGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQP----GFAIRPL 188 (209)
T ss_dssp ----CSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEET----TEEEEEE
T ss_pred ----cccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccC----CccccCc
Confidence 00011234455799999999999999999999999999999999999999999999877654322 2233333
Q ss_pred ccc-CHHHHHHHHHHh
Q 019226 326 SNV-RLKDLELLLQNV 340 (344)
Q Consensus 326 ~~~-~~~~l~~ll~~~ 340 (344)
.++ .+.+|.+.++.+
T Consensus 189 ~~~~e~~dll~~v~~l 204 (209)
T d2o2xa1 189 RDSSELGDLLAAIETL 204 (209)
T ss_dssp SSHHHHHHHHHHHHHT
T ss_pred cchhHHHHHHHHHHHH
Confidence 222 245555555544
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=4.1e-20 Score=152.34 Aligned_cols=110 Identities=17% Similarity=0.298 Sum_probs=79.3
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCCh--------hhH-------HHHHHHhhccchhcccceeecccchhhhhccCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATK--------SSV-------ILCLENLIGMERFEGLDCFLADCQSYVLMTNGT 242 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~--------~~~-------~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~ 242 (344)
+.++||+.++|+.|+++|++++++||... ... ...++.. ++. ++.
T Consensus 29 ~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~-~~~----~~~--------------- 88 (161)
T d2fpwa1 29 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQ-GVQ----FDE--------------- 88 (161)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHT-TCC----EEE---------------
T ss_pred ceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhcccc-ccc----cce---------------
Confidence 58999999999999999999999999641 111 1111111 110 111
Q ss_pred cCCccccccccC-CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh
Q 019226 243 LMPNRVCVCAHQ-GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE 312 (344)
Q Consensus 243 ~~~~~~~~~~~~-~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~ 312 (344)
..+|+|. .++...+||+|.++..+++++|++|++|+||||+..|+++|++|||.++++++.....
T Consensus 89 -----i~~~~~~~~~~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~~~~ 154 (161)
T d2fpwa1 89 -----VLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNW 154 (161)
T ss_dssp -----EEEECCCGGGCCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTTBCH
T ss_pred -----eeeccccccccccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCCCCH
Confidence 1234333 3556778999999999999999999999999999999999999999999997765543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.78 E-value=1.1e-19 Score=157.46 Aligned_cols=112 Identities=13% Similarity=0.067 Sum_probs=82.5
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+.++||+.++++.|+++|++++++||+....++.+++++ ++..+ +++ +...+.++... ..+ ++ ...
T Consensus 74 ~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l-~~~~~-----~~a---n~~~~~~~~~~---~~~-~~-~~~ 139 (226)
T d2feaa1 74 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDR-----IYC---NHASFDNDYIH---IDW-PH-SCK 139 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT-SCGGG-----EEE---EEEECSSSBCE---EEC-TT-CCC
T ss_pred cchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHc-CCccc-----eee---eeEEEeCCcce---ecc-cc-ccc
Confidence 679999999999999999999999999999999999887 43332 111 00001111100 000 00 122
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
....+|++.....+++++++++++|+||||+.+|++||++||+.++
T Consensus 140 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a 185 (226)
T d2feaa1 140 GTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 185 (226)
T ss_dssp TTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEE
T ss_pred cccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEE
Confidence 3346888999999999999999999999999999999999998654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=4.4e-19 Score=156.58 Aligned_cols=75 Identities=19% Similarity=0.373 Sum_probs=64.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchhhhccc----cccccCCccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSNVR 329 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~~~ 329 (344)
.+....+||+|.+|+.+++++|++|++|+||||++. |+++|+++||++|+|.+|....+.+.. |+++++++.|+.
T Consensus 169 ~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL~ 248 (250)
T d2c4na1 169 RKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp CCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred ccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHhC
Confidence 455667899999999999999999999999999985 999999999999999998877666643 578888887764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.1e-18 Score=149.04 Aligned_cols=136 Identities=13% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhh-ccCCcCCccccccccC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLM-TNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 254 (344)
....++||+.++++.|+++|++++|+|++....++.+++.+ +++.+. +++ +-..+ .+|... +...
T Consensus 79 ~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~l-gi~~~~----v~a---n~~~~~~~G~~~------g~~~ 144 (217)
T d1nnla_ 79 QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKL-NIPATN----VFA---NRLKFYFNGEYA------GFDE 144 (217)
T ss_dssp SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHT-TCCGGG----EEE---ECEEECTTSCEE------EECT
T ss_pred hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHh-CCcccc----eee---eeeeeeehhccc------ccee
Confidence 45789999999999999999999999999999999999997 765431 111 00011 122210 0000
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCcccc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNV 328 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~ 328 (344)
.......+.+.+....+.++ +++++|++|||+.+|+.|++.+|..++ ++...........+++.+.+|.++
T Consensus 145 ~~p~~~~~~K~~~v~~~~~~--~~~~~~~~vGDs~~Di~~~~~ag~~va-~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 145 TQPTAESGGKGKVIKLLKEK--FHFKKIIMIGDGATDMEACPPADAFIG-FGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TSGGGSTTHHHHHHHHHHHH--HCCSCEEEEESSHHHHTTTTTSSEEEE-ECSSCCCHHHHHHCSEEESCGGGG
T ss_pred eeeeeccchHHHHHHHHHhc--cCccccEEEEeCHhhHHHHHhCCceEE-ECCCHHHHHHHHhCCCEeCCHHHh
Confidence 11111122244555555554 456899999999999999999998754 433322223334567777777664
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.76 E-value=6.1e-20 Score=162.45 Aligned_cols=75 Identities=19% Similarity=0.309 Sum_probs=63.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchhhhccc----cccccCCccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFKD----AIAIYPDLSNVR 329 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~~----~~~~~~~~~~~~ 329 (344)
......+||+|.+|+.+++++|++|++|+||||+.. |+.+|+++||++|+|.+|....+++.. |+++++++.|++
T Consensus 173 ~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~~ 252 (253)
T d1wvia_ 173 VKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEWD 252 (253)
T ss_dssp CCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGCC
T ss_pred ceeEEeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHcC
Confidence 344456799999999999999999999999999986 999999999999999988776555432 578888887765
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=9.9e-18 Score=148.45 Aligned_cols=81 Identities=22% Similarity=0.420 Sum_probs=66.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH-hhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV-IGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~-~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
+...+||+|.+|..+++++|++|++|+||||++ +||.+|+++||.+|||.+|....+.+... ...||+..-++.||.+
T Consensus 180 ~~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~-~~~PD~ii~~l~eL~~ 258 (261)
T d1vjra_ 180 DLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA-ETKPDFVFKNLGELAK 258 (261)
T ss_dssp SEECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHC-SSCCSEEESSHHHHHH
T ss_pred ccccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhc-CCCCCEEECCHHHHHH
Confidence 345689999999999999999999999999997 59999999999999999988776665432 2345666667778877
Q ss_pred HHH
Q 019226 336 LLQ 338 (344)
Q Consensus 336 ll~ 338 (344)
+|+
T Consensus 259 ~l~ 261 (261)
T d1vjra_ 259 AVQ 261 (261)
T ss_dssp HHC
T ss_pred HhC
Confidence 764
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.72 E-value=1.7e-19 Score=159.52 Aligned_cols=75 Identities=17% Similarity=0.266 Sum_probs=64.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHHHcCCeEEEEeCCCchhhhcc----ccccccCCccccC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVI-GLQAATRAGMACVITYTSSTAEQDFK----DAIAIYPDLSNVR 329 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~~aG~~~v~v~~~~~~~~~l~----~~~~~~~~~~~~~ 329 (344)
......+||++.+|..+++++|++|++|+||||+++ |++||+++||.+|+|.+|....+.+. .|+++++++.|++
T Consensus 173 ~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~~ 252 (253)
T d1yv9a1 173 TKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWT 252 (253)
T ss_dssp CCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCC
T ss_pred ceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHcC
Confidence 455667999999999999999999999999999975 99999999999999988776544332 3689999988876
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.67 E-value=3.8e-16 Score=132.13 Aligned_cols=127 Identities=22% Similarity=0.237 Sum_probs=91.6
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCC
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGD 256 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (344)
...+++|+.++++.++.+|..++++|+.....+....+.. ....+ +..... ..++.. +.....
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~-------~~~~~~-------~~~~~~ 135 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKL-GLDYA--FANRLI-------VKDGKL-------TGDVEG 135 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHH-TCSEE--EEEEEE-------EETTEE-------EEEEEC
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhcc-chhhh--hhhhhc-------cccccc-------cccccc
Confidence 3689999999999999999999999999888888877776 33332 111111 111111 001123
Q ss_pred CCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCC
Q 019226 257 DVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPD 324 (344)
Q Consensus 257 ~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~ 324 (344)
....+++++.....++++++++++++++|||+.||+.|++.||+..++ + + .....+.+++++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n-a--~~~lk~~Ad~vi~~ 199 (210)
T d1j97a_ 136 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-A--KPILKEKADICIEK 199 (210)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S-C--CHHHHTTCSEEECS
T ss_pred cccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-C-C--CHHHHHhCCEEEcC
Confidence 345577889999999999999999999999999999999999998654 3 2 22233457787765
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.60 E-value=3.3e-15 Score=125.98 Aligned_cols=133 Identities=11% Similarity=-0.005 Sum_probs=86.8
Q ss_pred CCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCC
Q 019226 176 GTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQG 255 (344)
Q Consensus 176 ~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (344)
......++....+..++ .+++++++|++...........+ ............. ++ .
T Consensus 66 ~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~l~~~---------~~-------------~ 121 (206)
T d1rkua_ 66 ATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQL-GFPTLLCHKLEID---------DS-------------D 121 (206)
T ss_dssp TTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHT-TCCCEEEEEEEEC---------TT-------------S
T ss_pred hhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHh-CCchhhcceeeee---------cc-------------c
Confidence 45678899988888775 67999999999888888877776 4333211111111 11 1
Q ss_pred CCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHH
Q 019226 256 DDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLEL 335 (344)
Q Consensus 256 ~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 335 (344)
.......+++......++++++++++|++|||+.||++|.+.||...++ +.+ .......++++.. .+.++|.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~--~~v~~~~~~~~~~----~~~~d~~~ 194 (206)
T d1rkua_ 122 RVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAP--ENVIREFPQFPAV----HTYEDLKR 194 (206)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCC--HHHHHHCTTSCEE----CSHHHHHH
T ss_pred ccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCC--HHHHHhCCCceee----cCHHHHHH
Confidence 1122234555667888899999999999999999999999999999877 432 2111122333332 25666665
Q ss_pred HHHH
Q 019226 336 LLQN 339 (344)
Q Consensus 336 ll~~ 339 (344)
.+.+
T Consensus 195 ~~~~ 198 (206)
T d1rkua_ 195 EFLK 198 (206)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.56 E-value=2.9e-15 Score=139.75 Aligned_cols=145 Identities=21% Similarity=0.294 Sum_probs=106.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
+|+||+.++|+.|+++|++++++||.....++..++.+ ++..++..+.+++- ..+..+. ....+..
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l-gl~~~F~~~~i~~~----~d~~~~~---------~~~~~~~ 280 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL-GLLPYFEADFIATA----SDVLEAE---------NMYPQAR 280 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCGGGSCGGGEECH----HHHHHHH---------HHSTTSC
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc-CCcccCCcceEEec----chhhhhh---------hhccccc
Confidence 46679999999999999999999999999999999997 77776433444430 0000000 0002345
Q ss_pred CCCCCCHHHHHHHHHHc--------------CCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchh---hhc--cccc
Q 019226 259 KQKKPDPSIYVTAAKRL--------------GISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAE---QDF--KDAI 319 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~l--------------gv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~---~~l--~~~~ 319 (344)
...||+|++|..++..+ ++.+++|+||||+.+|+.+|++||+.+|+|..|.... .++ .+++
T Consensus 281 ~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD 360 (380)
T d1qyia_ 281 PLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD 360 (380)
T ss_dssp CCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS
T ss_pred cccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCC
Confidence 67899999999988654 5678999999999999999999999999998775432 223 2477
Q ss_pred cccCCccccCHHHHHHHHHHhhh
Q 019226 320 AIYPDLSNVRLKDLELLLQNVVA 342 (344)
Q Consensus 320 ~~~~~~~~~~~~~l~~ll~~~~~ 342 (344)
++++++ .+|.++|.++++
T Consensus 361 ~ii~~~-----~el~~il~~l~~ 378 (380)
T d1qyia_ 361 YVINHL-----GELRGVLDNLLE 378 (380)
T ss_dssp EEESSG-----GGHHHHHSCTTT
T ss_pred EEECCH-----HHHHHHHHHHHh
Confidence 777665 456677766653
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.54 E-value=2.7e-15 Score=121.08 Aligned_cols=106 Identities=14% Similarity=0.077 Sum_probs=74.4
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh---HHHHHHHhh-ccchhc--ccceeecccchhhhhccCCcCCcccccc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLI-GMERFE--GLDCFLADCQSYVLMTNGTLMPNRVCVC 251 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~---~~~~l~~l~-~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (344)
..++||+.++|+.|+++|++++++||..... +...++... .+..+. .++...
T Consensus 35 ~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~---------------------- 92 (149)
T d1ltqa1 35 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQC---------------------- 92 (149)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEE----------------------
T ss_pred CccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEee----------------------
Confidence 4789999999999999999999999976432 222222210 001110 011111
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHHcCCCCCcE-EEEecCHhhHHHHHHcCCeEEEEeCC
Q 019226 252 AHQGDDVKQKKPDPSIYVTAAKRLGISEKDC-LVVEDSVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 252 ~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~-i~vGDs~~Di~~a~~aG~~~v~v~~~ 308 (344)
.......+|+.......++++..+..++ ++|||+..|++||+++|+.|+.|.+|
T Consensus 93 ---~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 93 ---QREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp ---ECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ---cccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 2333446788888888888887776664 67899999999999999999999876
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.39 E-value=8.2e-15 Score=125.79 Aligned_cols=78 Identities=17% Similarity=0.026 Sum_probs=57.0
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLL 337 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll 337 (344)
+..+.+++..++.+++++|++++++++|||+.||+.|++.+|+..++ . +........++++.++.. .+.+.+.+
T Consensus 147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav-~--na~~~~k~~A~~v~~~~~---~~gv~~~i 220 (230)
T d1wr8a_ 147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-A--QAPKILKENADYVTKKEY---GEGGAEAI 220 (230)
T ss_dssp ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-T--TSCHHHHTTCSEECSSCH---HHHHHHHH
T ss_pred eeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE-C--CCCHHHHHhCCEEECCCC---cCHHHHHH
Confidence 45678889999999999999999999999999999999999987554 2 223333445677776532 23344444
Q ss_pred HHhh
Q 019226 338 QNVV 341 (344)
Q Consensus 338 ~~~~ 341 (344)
...+
T Consensus 221 ~~~l 224 (230)
T d1wr8a_ 221 YHIL 224 (230)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.29 E-value=2.9e-11 Score=106.92 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=56.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
.+-.|...++.+++++|++++++++|||+.||+.|.+.+|..+++ ++..++....++++.++..+ +-+.+.|++
T Consensus 210 ~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam---~na~~~~k~~A~~v~~~~~~---~Gv~~~l~~ 283 (285)
T d1nrwa_ 210 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM---GNAREDIKSIADAVTLTNDE---HGVAHMMKH 283 (285)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC---TTCCHHHHHHCSEECCCGGG---THHHHHHHH
T ss_pred ccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe---CCCCHHHHHhCCEEcCCCCc---cHHHHHHHH
Confidence 344578999999999999999999999999999999999988765 23333444567777775443 345666554
Q ss_pred h
Q 019226 340 V 340 (344)
Q Consensus 340 ~ 340 (344)
+
T Consensus 284 l 284 (285)
T d1nrwa_ 284 L 284 (285)
T ss_dssp T
T ss_pred h
Confidence 4
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.29 E-value=4.6e-12 Score=111.56 Aligned_cols=77 Identities=10% Similarity=0.134 Sum_probs=59.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
.+-.|...++.+++++|++++++++|||+.||+.|.+.+|..+++ ++...+....+++++++..+ .-+.+++++
T Consensus 187 ~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~---~na~~~~k~~A~~i~~~~~~---~Gva~~i~~ 260 (267)
T d1nf2a_ 187 KNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM---ENAIEKVKEASDIVTLTNND---SGVSYVLER 260 (267)
T ss_dssp TTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC---TTSCHHHHHHCSEECCCTTT---THHHHHHTT
T ss_pred CCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCc---cHHHHHHHH
Confidence 344578999999999999999999999999999999999988654 33334455667888776544 457777776
Q ss_pred hhh
Q 019226 340 VVA 342 (344)
Q Consensus 340 ~~~ 342 (344)
++.
T Consensus 261 ll~ 263 (267)
T d1nf2a_ 261 IST 263 (267)
T ss_dssp BCB
T ss_pred HHh
Confidence 654
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.23 E-value=5.8e-13 Score=114.43 Aligned_cols=73 Identities=5% Similarity=-0.066 Sum_probs=53.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHH
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQN 339 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~ 339 (344)
+..+...++.+++++|+++++|++|||+.||+.|++.+|...++ . +..+.....++++++.-. ...+.++++.
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav-~--na~~~~k~~ad~v~~~~~---~~gi~~~l~~ 221 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-A--NATDNIKAVSDFVSDYSY---GEEIGQIFKH 221 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-T--TSCHHHHHHCSEECSCCT---THHHHHHHHH
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE-C--CCcHHHHHhCCEEECCCC---cCHHHHHHHH
Confidence 44568899999999999999999999999999999999987654 2 223333445677665543 2455555544
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=2.6e-11 Score=106.53 Aligned_cols=72 Identities=11% Similarity=0.113 Sum_probs=54.0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 263 PDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 263 P~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
.|....+.++++++++++++++|||+.||+.|.+.+|...++ ++...+....++++.++..+ .-+.+.|+++
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am---~na~~~lk~~a~~i~~~~~~---~Gv~~~l~~~ 268 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV---DNAIPSVKEVANFVTKSNLE---DGVAFAIEKY 268 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHHHCSEECCCTTT---THHHHHHHHH
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe---CCCCHHHHHhCCEEcCCCCc---ChHHHHHHHH
Confidence 467899999999999999999999999999999999988765 33333334456777775443 3455555554
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.18 E-value=7.7e-11 Score=98.49 Aligned_cols=98 Identities=18% Similarity=0.261 Sum_probs=71.1
Q ss_pred cCccHHHHHHHHHHcCCeEEEEeCCC--------hhhHHHHHHHhhccchhc-ccceeecccchhhhhccCCcCCccccc
Q 019226 180 PRPGVLRLMDEAKAAGKKVAVCSAAT--------KSSVILCLENLIGMERFE-GLDCFLADCQSYVLMTNGTLMPNRVCV 250 (344)
Q Consensus 180 ~~pgv~~~l~~Lk~~g~~v~ivTn~~--------~~~~~~~l~~l~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~ 250 (344)
++|++.+.|+.|+++|+.++|+||.. ........+.+. ..+. .+.. .+
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~--~~l~~~~~i---------------------~~ 107 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL--EKLGVPFQV---------------------LV 107 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH--HHHTSCCEE---------------------EE
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH--HHcCCCccE---------------------EE
Confidence 47999999999999999999999963 222222222221 1111 0122 33
Q ss_pred cccCCCCCCCCCCCHHHHHHHHHHcC----CCCCcEEEEecCH-----------------hhHHHHHHcCCeEE
Q 019226 251 CAHQGDDVKQKKPDPSIYVTAAKRLG----ISEKDCLVVEDSV-----------------IGLQAATRAGMACV 303 (344)
Q Consensus 251 ~~~~~~~~~~~KP~~~~~~~~~~~lg----v~~~~~i~vGDs~-----------------~Di~~a~~aG~~~v 303 (344)
|+| +..++||.+-|+..++++++ ++.++++||||.. .|++.|.++|+...
T Consensus 108 ~~~---~~~~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 108 ATH---AGLNRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp ECS---SSSSSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred ecC---ccccCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 433 34569999999999999975 8899999999953 89999999999964
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=1.2e-10 Score=102.17 Aligned_cols=75 Identities=16% Similarity=0.052 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+-.|...++.+++++|++++++++|||+.||+.|.+.+|...++ ++..++....++++.++..+- -+.+.++++
T Consensus 188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam---~Na~~~lk~~A~~v~~~~~~~---Gva~~i~~~ 261 (269)
T d1rlma_ 188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM---GNAAENIKQIARYATDDNNHE---GALNVIQAV 261 (269)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC---TTCCHHHHHHCSEECCCGGGT---HHHHHHHHH
T ss_pred chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe---CCCCHHHHHhCCEEcCCCCcc---HHHHHHHHH
Confidence 44578999999999999999999999999999999999999775 233333445577777664433 244444444
Q ss_pred h
Q 019226 341 V 341 (344)
Q Consensus 341 ~ 341 (344)
+
T Consensus 262 l 262 (269)
T d1rlma_ 262 L 262 (269)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.04 E-value=9.1e-11 Score=103.21 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=56.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
..+.-+...+..+++.++++++++++|||+.||+.|.+.+|..+++ ++...+....++++.++-.+-. -+.++++
T Consensus 203 ~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~---~na~~~~k~~a~~v~~~~~~~g--~v~~~l~ 277 (283)
T d2b30a1 203 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV---ANATDSAKSHAKCVLPVSHREG--AVAYLLK 277 (283)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC---TTCCHHHHHHSSEECSSCTTTT--HHHHHHH
T ss_pred CCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe---CCCCHHHHHhCCEEECCcCCCc--HHHHHHH
Confidence 3455678999999999999999999999999999999999988664 2233333445677765433221 3555665
Q ss_pred Hhh
Q 019226 339 NVV 341 (344)
Q Consensus 339 ~~~ 341 (344)
+++
T Consensus 278 ~~~ 280 (283)
T d2b30a1 278 KVF 280 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.96 E-value=3.3e-10 Score=98.94 Aligned_cols=75 Identities=8% Similarity=0.088 Sum_probs=54.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHH
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQ 338 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~ 338 (344)
..+-.|...++.+++++|++++++++|||+.||+.|.+.+|..+++ . +..++....++++.++..+ .-+.+.++
T Consensus 182 p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~--na~~~lk~~A~~vt~~~~~---~Gv~~~l~ 255 (260)
T d2rbka1 182 AKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-G--QAKEDVKAAADYVTAPIDE---DGISKAMK 255 (260)
T ss_dssp STTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-T--TSCHHHHHHSSEECCCGGG---THHHHHHH
T ss_pred eCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-C--CCCHHHHHhCCEEeCCCCc---cHHHHHHH
Confidence 3445678999999999999999999999999999999999997654 3 2233334456677665443 34555554
Q ss_pred H
Q 019226 339 N 339 (344)
Q Consensus 339 ~ 339 (344)
+
T Consensus 256 ~ 256 (260)
T d2rbka1 256 H 256 (260)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.92 E-value=5.9e-10 Score=95.58 Aligned_cols=44 Identities=7% Similarity=0.003 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHHcC-CCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 261 KKPDPSIYVTAAKRLG-ISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lg-v~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
+-.+......++++++ +.++++++|||+.||++|.+.+|...++
T Consensus 177 ~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~ 221 (243)
T d1wzca1 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV 221 (243)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE
T ss_pred hhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEe
Confidence 4456788899999984 8899999999999999999999988765
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=1.3e-09 Score=91.22 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=66.0
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhh---HHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSS---VILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~---~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..+.||+.++++.++++|++|+.+||..... +...+++.+++......+..+.
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~------------------------ 140 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFA------------------------ 140 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEEC------------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEee------------------------
Confidence 4688999999999999999999999976443 3333332124332211122222
Q ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCc
Q 019226 255 GDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSST 310 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~ 310 (344)
+++ ..|.. -+..++++++ ++++||..+|+.+|..+|+.+|-+.+...
T Consensus 141 ~~~--~~K~~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r~~~ 187 (209)
T d2b82a1 141 GDK--PGQNT---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASN 187 (209)
T ss_dssp CCC--TTCCC---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred CCC--CCchH---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeeccCC
Confidence 222 12222 2333456666 78999999999999999999998865444
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.83 E-value=3.4e-09 Score=93.92 Aligned_cols=112 Identities=10% Similarity=0.086 Sum_probs=71.9
Q ss_pred hCCCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 175 SGTVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 175 ~~~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
...+.+.||+.++++.|+++|++++|+|++....++.+++++ ++..- .-.+++ |.+...++.+.- -.
T Consensus 131 ~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~l-g~~~~--ni~I~s---N~l~f~~~~~~~------~~- 197 (291)
T d2bdua1 131 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQA-GVYHS--NVKVVS---NFMDFDENGVLK------GF- 197 (291)
T ss_dssp HSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHT-TCCBT--TEEEEE---ECEEECTTSBEE------EE-
T ss_pred hcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHc-CCCcc--CceEEe---eEEEEeCCeeEe------ec-
Confidence 345789999999999999999999999999999999999997 54321 012344 444444333210 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHc--CCCCCcEEEEecCHhhHHHHHHcC
Q 019226 255 GDDVKQKKPDPSIYVTAAKRL--GISEKDCLVVEDSVIGLQAATRAG 299 (344)
Q Consensus 255 ~~~~~~~KP~~~~~~~~~~~l--gv~~~~~i~vGDs~~Di~~a~~aG 299 (344)
.+......-+..........+ .-..++++++|||.+|+.||..+.
T Consensus 198 ~~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 198 KGELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp CSSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred cCCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 011111111223333333332 235678999999999999998754
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.75 E-value=1.4e-08 Score=87.20 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 260 QKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 260 ~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.+.-+....+.+++++|++++++++|||+.||+.|.+.+|..+++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav 203 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV 203 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe
Confidence 344567899999999999999999999999999999999987654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=5e-09 Score=88.74 Aligned_cols=43 Identities=9% Similarity=-0.080 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHHH---HcCCCCCcEEEEecCHhhHHHHHHcCCeEE
Q 019226 261 KKPDPSIYVTAAK---RLGISEKDCLVVEDSVIGLQAATRAGMACV 303 (344)
Q Consensus 261 ~KP~~~~~~~~~~---~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v 303 (344)
...+....+.+++ ++|++++++++|||+.||+.|.+.+|...+
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~va 227 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVI 227 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEE
T ss_pred CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEE
Confidence 4455666666665 579999999999999999999999998654
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.57 E-value=2.9e-07 Score=75.30 Aligned_cols=112 Identities=13% Similarity=0.178 Sum_probs=83.7
Q ss_pred HHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCCCCCCCCHH
Q 019226 187 LMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDVKQKKPDPS 266 (344)
Q Consensus 187 ~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~~~ 266 (344)
.+..|+..|+.++++|......+....+.+ ++ ..++. ..+++..
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l-~~------~~~~~-----------------------------~~~~K~~ 83 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRIADL-GI------KLFFL-----------------------------GKLEKET 83 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHH-TC------CEEEE-----------------------------SCSCHHH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHHhhh-cc------ccccc-----------------------------ccccHHH
Confidence 477888999999999999888888777776 32 22222 1456778
Q ss_pred HHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC-HHHHHHHH
Q 019226 267 IYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR-LKDLELLL 337 (344)
Q Consensus 267 ~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~ll 337 (344)
.++.+++++|+++++|+||||+.||+++.+.+|...+. .....+....++++.+.-..-- +.|+.+++
T Consensus 84 ~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap---~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 84 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV---ADAPIYVKNAVDHVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC---TTSCHHHHTTSSEECSSCTTTTHHHHHHHHH
T ss_pred HHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc---CCccHHHHHhCCEEeCCCCCCchHHHHHHHH
Confidence 89999999999999999999999999999999998764 3333344455777777655443 45555554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=6e-08 Score=82.22 Aligned_cols=34 Identities=9% Similarity=-0.161 Sum_probs=27.2
Q ss_pred cCCCCCcEEEEec----CHhhHHHHHHcCCeEEEEeCC
Q 019226 275 LGISEKDCLVVED----SVIGLQAATRAGMACVITYTS 308 (344)
Q Consensus 275 lgv~~~~~i~vGD----s~~Di~~a~~aG~~~v~v~~~ 308 (344)
++++++++++||| +.||++|.+.+|..+++++++
T Consensus 194 ~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~ 231 (243)
T d2amya1 194 ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 231 (243)
T ss_dssp TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCH
Confidence 5678899999999 679999999999777776543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.40 E-value=1.9e-06 Score=71.20 Aligned_cols=115 Identities=16% Similarity=0.216 Sum_probs=69.4
Q ss_pred CCccCccHHHHHHHHHHcC-CeEEEEeCCChh---hHH---HHHHHhhccchhcccceeecccchhhhhccCCcCCcccc
Q 019226 177 TVEPRPGVLRLMDEAKAAG-KKVAVCSAATKS---SVI---LCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVC 249 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g-~~v~ivTn~~~~---~~~---~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 249 (344)
.+.++||+.++++.|++.| +.+.++|..... ... ..++++++-... ...+++
T Consensus 72 ~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~--~~~~~t------------------- 130 (195)
T d1q92a_ 72 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFL--EQIVLT------------------- 130 (195)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGG--GGEEEC-------------------
T ss_pred hCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCc--cEEEEc-------------------
Confidence 4689999999999999865 578888876432 122 233333221111 112222
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccC
Q 019226 250 VCAHQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVR 329 (344)
Q Consensus 250 ~~~~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~ 329 (344)
++ |- .+. . -++|+|++..+..+..+|+.+++...+.+...........+.++.|.
T Consensus 131 -----~~-----K~----------~~~--~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~- 185 (195)
T d1q92a_ 131 -----RD-----KT----------VVS--A--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD- 185 (195)
T ss_dssp -----SC-----ST----------TSC--C--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC-
T ss_pred -----cc-----cc----------eec--C--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHH-
Confidence 21 10 111 1 28999999999999999999998887776543323334456676653
Q ss_pred HHHHHHHHHHh
Q 019226 330 LKDLELLLQNV 340 (344)
Q Consensus 330 ~~~l~~ll~~~ 340 (344)
.+.+|++.
T Consensus 186 ---~~~il~~~ 193 (195)
T d1q92a_ 186 ---WKAILDSK 193 (195)
T ss_dssp ---HHHHHHTT
T ss_pred ---HHHHHhcc
Confidence 35566554
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.39 E-value=6.8e-07 Score=74.90 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=46.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEEEeCCCchhhhccccccccCCccccCHHHHHHHHHHh
Q 019226 261 KKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVITYTSSTAEQDFKDAIAIYPDLSNVRLKDLELLLQNV 340 (344)
Q Consensus 261 ~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ll~~~ 340 (344)
+-.+....+.+++ .+++++|||+.||+.|...+|....+-+ +.. ...+.+.+++..+ +.+|.+.|+.+
T Consensus 157 g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~-g~~----~~~A~~~~~~~~e--v~~~l~~l~~~ 224 (229)
T d1u02a_ 157 GVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVADYIE--MRKILKFIEML 224 (229)
T ss_dssp TCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESSHHH--HHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEe-CCC----CccCeEEcCCHHH--HHHHHHHHHHH
Confidence 3345666666653 4789999999999999999987643322 221 1356778887766 46677777665
Q ss_pred h
Q 019226 341 V 341 (344)
Q Consensus 341 ~ 341 (344)
-
T Consensus 225 ~ 225 (229)
T d1u02a_ 225 G 225 (229)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.37 E-value=1.6e-05 Score=73.52 Aligned_cols=121 Identities=14% Similarity=0.119 Sum_probs=81.9
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhh------ccchhcccceeecc--cchhh---------hhcc
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLI------GMERFEGLDCFLAD--CQSYV---------LMTN 240 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~------~~~~~~~~d~~~~~--~~~~~---------~~~~ 240 (344)
+...|++..+|.+||++|.++.++||+.-..+...+..+. +-+.-.-||.+|.- +|.|- ..++
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence 3457889999999999999999999999999999999987 33333347877652 11111 1112
Q ss_pred CCcCCccccccccCCCCCCCCCCC---HHHHHHHHHHcCCCCCcEEEEecCHh-hHHHHH-HcCCeEEEEeCCC
Q 019226 241 GTLMPNRVCVCAHQGDDVKQKKPD---PSIYVTAAKRLGISEKDCLVVEDSVI-GLQAAT-RAGMACVITYTSS 309 (344)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~KP~---~~~~~~~~~~lgv~~~~~i~vGDs~~-Di~~a~-~aG~~~v~v~~~~ 309 (344)
|.+.. . ....||. .-....+.+.+|..-.++++|||+.. ||..++ ..||.|++|...-
T Consensus 264 g~l~~---------~--~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~EL 326 (458)
T d2bdea1 264 GTMTN---------V--HGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEEL 326 (458)
T ss_dssp CCEEE---------C--CSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECTTH
T ss_pred Ccccc---------C--CccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehHHH
Confidence 21100 0 0001110 12256677788999999999999994 988775 5799999986543
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.16 E-value=7.3e-06 Score=63.59 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=67.3
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCCC
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDDV 258 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (344)
.+.|++.+.++.|++.|++++++|+.....+..+.+.+ +++ .++. .
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~l-gI~------~v~~-------------------------~-- 66 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL-NLD------LVIA-------------------------E-- 66 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-TCS------EEEC-------------------------S--
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhh-hhh------hhcc-------------------------c--
Confidence 58899999999999999999999999999888888886 543 3333 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 259 KQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 259 ~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
-.|+-...+.+++.-. ..+.||||+.||..+.+.|++...+
T Consensus 67 ----~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~ 107 (135)
T d2b8ea1 67 ----VLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV 107 (135)
T ss_dssp ----CCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEE
T ss_pred ----cchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeec
Confidence 1133444555555443 6888999999999999999988654
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.11 E-value=2e-06 Score=72.26 Aligned_cols=42 Identities=2% Similarity=-0.167 Sum_probs=31.1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEecCH----hhHHHHHHcCCeEEEEeCC
Q 019226 264 DPSIYVTAAKRLGISEKDCLVVEDSV----IGLQAATRAGMACVITYTS 308 (344)
Q Consensus 264 ~~~~~~~~~~~lgv~~~~~i~vGDs~----~Di~~a~~aG~~~v~v~~~ 308 (344)
|...++.++ +.+++++++|||+. ||++|.+.+|..++.|.++
T Consensus 186 Kg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na 231 (244)
T d2fuea1 186 KRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 231 (244)
T ss_dssp TTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred HHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCH
Confidence 344454444 45889999999975 9999999999766666543
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.77 E-value=0.00014 Score=58.31 Aligned_cols=113 Identities=16% Similarity=0.182 Sum_probs=69.5
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcc--cceeecccchhhhhccCCcC----Cccccccc
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEG--LDCFLADCQSYVLMTNGTLM----PNRVCVCA 252 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~--~d~~~~~~~~~~~~~~~~~~----~~~~~~~~ 252 (344)
++.|++.+.++.|++.|+++.++|+.+...+..+.+.+ ++..... .+..+. +..++ ..+.-..
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~-Gi~~~~~~v~~~~~~---------~~~~~~~~~~~~~~~~- 88 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI-GIFGENEEVADRAYT---------GREFDDLPLAEQREAC- 88 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHT-TSSCTTCCCTTTEEE---------HHHHHHSCHHHHHHHH-
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHc-CCCCCcccccccccc---------ccccchhhHHHHhhhh-
Confidence 57899999999999999999999999999999999887 5432110 000000 00000 0000000
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHHHHHHcCCeEEE
Q 019226 253 HQGDDVKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQAATRAGMACVI 304 (344)
Q Consensus 253 ~~~~~~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~~a~~aG~~~v~ 304 (344)
.......+=.|+--..+.+.+.-.-..+.|+||+.||..+.+.|.....+
T Consensus 89 --~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~ 138 (168)
T d1wpga2 89 --RRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM 138 (168)
T ss_dssp --HHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE
T ss_pred --hhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe
Confidence 00001122334444444444444447899999999999999999987544
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.29 E-value=0.00025 Score=53.61 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=25.7
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAAT 205 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~ 205 (344)
..|.+++.+.|..|++.|+++.+.|...
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~ 50 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARN 50 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4789999999999999999999999874
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.10 E-value=0.00053 Score=51.63 Aligned_cols=38 Identities=11% Similarity=0.040 Sum_probs=31.4
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
+|.|++.+.|+.|++.|+++.+.|...........+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL 58 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC 58 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHH
Confidence 68899999999999999999999998766555545444
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.38 E-value=0.022 Score=45.47 Aligned_cols=85 Identities=16% Similarity=0.132 Sum_probs=58.1
Q ss_pred CccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccCCCC
Q 019226 178 VEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQGDD 257 (344)
Q Consensus 178 ~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (344)
+...||+.++|+.+.+. +.++|.|.+....++.+++.+.. ... +..... .+.
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp-~~~--~~~~~~------------------------r~~ 105 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDK-WGA--FRARLF------------------------RES 105 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCS-SCC--EEEEEC------------------------GGG
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhcc-CCc--eeEEEE------------------------eee
Confidence 56899999999999987 99999999999999999998732 221 222222 111
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCHhhHH
Q 019226 258 VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSVIGLQ 293 (344)
Q Consensus 258 ~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~~Di~ 293 (344)
....+ ..+.+-++.+|.+.+++++|+|++.-..
T Consensus 106 c~~~~---~~~~KdL~~l~~~l~~vvivDd~~~~~~ 138 (181)
T d1ta0a_ 106 CVFHR---GNYVKDLSRLGRDLRRVLILDNSPASYV 138 (181)
T ss_dssp SEEET---TEEECCGGGSCSCGGGEEEECSCGGGGT
T ss_pred eeecC---CcccccHhhcCCCHHHeEEEcCChhhhh
Confidence 00000 0122334667888999999999987553
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.50 E-value=1.3 Score=36.27 Aligned_cols=39 Identities=10% Similarity=0.011 Sum_probs=33.6
Q ss_pred CCccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHh
Q 019226 177 TVEPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENL 216 (344)
Q Consensus 177 ~~~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l 216 (344)
.+.+.||+.++|+.+++. .+.+|+|.+-++.++.+...+
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~ 117 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMI 117 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHT
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhc
Confidence 378999999999999987 788899988888888877775
|
| >d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: ThiG-like family: ThiG-like domain: Thiazole biosynthesis protein ThiG species: Bacillus subtilis [TaxId: 1423]
Probab=89.00 E-value=2.3 Score=34.56 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=69.8
Q ss_pred CccCccHHHHHH---HHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeecccchhhhhccCCcCCccccccccC
Q 019226 178 VEPRPGVLRLMD---EAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLADCQSYVLMTNGTLMPNRVCVCAHQ 254 (344)
Q Consensus 178 ~~~~pgv~~~l~---~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (344)
..++|+..++++ .|-+.|+.|...++.+.-.++++ +.. | ...+..+
T Consensus 105 ~~L~PD~~etl~Aae~Lv~eGF~VlpY~~~D~v~ak~L-e~~-G------c~avMPl----------------------- 153 (251)
T d1xm3a_ 105 RSLLPDPVETLKASEQLLEEGFIVLPYTSDDVVLARKL-EEL-G------VHAIMPG----------------------- 153 (251)
T ss_dssp TTCCBCHHHHHHHHHHHHHTTCCEEEEECSCHHHHHHH-HHH-T------CSCBEEC-----------------------
T ss_pred CCcCCCHHHHHHHHHHHHhCCcEEEEecCCCHHHHHHH-HHc-C------ChhHHHh-----------------------
Confidence 357888888886 57788999999999998755553 333 2 2333331
Q ss_pred CCC--CCCCCCCHHHHHHHHHHcCCCCCcEEEEecCH---hhHHHHHHcCCeEEEEeCCC
Q 019226 255 GDD--VKQKKPDPSIYVTAAKRLGISEKDCLVVEDSV---IGLQAATRAGMACVITYTSS 309 (344)
Q Consensus 255 ~~~--~~~~KP~~~~~~~~~~~lgv~~~~~i~vGDs~---~Di~~a~~aG~~~v~v~~~~ 309 (344)
+.. .+.+.-++..++.++++..++ +.|+-+. .|...|...|+..|++|+..
T Consensus 154 gsPIGSg~Gl~n~~~l~~i~~~~~vP----vIvDAGIG~pSdAa~AMElG~daVLvNTAI 209 (251)
T d1xm3a_ 154 ASPIGSGQGILNPLNLSFIIEQAKVP----VIVDAGIGSPKDAAYAMELGADGVLLNTAV 209 (251)
T ss_dssp SSSTTCCCCCSCHHHHHHHHHHCSSC----BEEESCCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred hhhhhcCCCcCChHHHHHHHhcCCcc----EEEecCCCCHHHHHHHHHccCCEEEechhh
Confidence 322 234567899999999998775 5665553 69999999999999998654
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=85.83 E-value=0.22 Score=44.11 Aligned_cols=22 Identities=27% Similarity=0.637 Sum_probs=18.2
Q ss_pred ccEEEEecCccccccchhHHHH
Q 019226 67 LQALIFDCDGVIIESEHLHRQA 88 (344)
Q Consensus 67 ~k~viFD~DGTL~d~~~~~~~a 88 (344)
+|.|+|||||+|++.+..+...
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s 22 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVS 22 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEeCCcEEEcceeecchH
Confidence 4789999999999988776543
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=82.67 E-value=0.56 Score=38.35 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=29.6
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHH
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLEN 215 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~ 215 (344)
.++|++.++|+.|+++|++++++||+.........+.
T Consensus 19 ~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~ 55 (250)
T d2c4na1 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANR 55 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHH
Confidence 6778999999999999999999999775544444433
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=82.16 E-value=0.23 Score=39.02 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=14.9
Q ss_pred CCccEEEEecCcccccc
Q 019226 65 QSLQALIFDCDGVIIES 81 (344)
Q Consensus 65 ~~~k~viFD~DGTL~d~ 81 (344)
..+|+++||+||||.|.
T Consensus 3 ~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGCCEEEEECTTTTSCS
T ss_pred ccCeEEEEccCCcccCC
Confidence 45899999999999875
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=80.79 E-value=0.89 Score=37.12 Aligned_cols=49 Identities=24% Similarity=0.277 Sum_probs=38.8
Q ss_pred ccCccHHHHHHHHHHcCCeEEEEeCCChhhHHHHHHHhhccchhcccceeec
Q 019226 179 EPRPGVLRLMDEAKAAGKKVAVCSAATKSSVILCLENLIGMERFEGLDCFLA 230 (344)
Q Consensus 179 ~~~pgv~~~l~~Lk~~g~~v~ivTn~~~~~~~~~l~~l~~~~~~~~~d~~~~ 230 (344)
.+.+.+.++|++|+++|++++++|+.....+...++.+ ++... .+.+++
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l-~l~~~--~~~~i~ 69 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKEL-HMEQP--GDYCIT 69 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHT-TCCST--TCEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHh-cCcCC--CcEEEE
Confidence 45688899999999999999999999988888888886 54432 244554
|