Citrus Sinensis ID: 019227

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----

MDSPSSTTRIAARSSMIDSIRGCGLSGMRIDKEDLRRKLSIPEYLRVAMSNAIRRKEGEPPADTCQSDVIVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSLLY

cccccccccccccHHHHHHHHccccccccccccccccccccccccHHHHHHHHHccccccccccccccEEEcccccccccccEEEEEEcccccccHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHccHHHHcccccEEEEEEcccHHHHHHHHHHHHHHcccccccccEEEEEccccccccEEcccccccccccHHHHHHHHHHHHccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccEEEEccccccccHHHHccccccccccccccccccccEEEEHHHHccccccccccccccccEEEEEccccccc

ccccccEEEEEHHHHHHHHHHHHcccccccccHHHHHcEccccHEEHcHcHHccccccccccccccccccEcccccccccccEEEEEccccccccHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHccccccHHHHHHHHHcEEEEEcccccHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHcccccccccccHHHHHHHHHHHcccEEEEccEEEEEEccccccccccccccccccccccccccccccccccccccHHHHHcEEEEcHHHHHHHHHHHHHHHccHHHccHHHcHEEHHcccccHHHHcccccccccEEEEEEccccccc

MDSPSSTTRIAARSSMIDSirgcglsgmridkedlrrklsiPEYLRVAMSNAIrrkegeppadtcqsdvivdgngvqppeapmVVFInsrsggrhgpELKERLQELMgkeqvfdlsevkphefVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVgelnkqgrepvppvaiiplgtgndlsrsfgwggsfpfAWKSAVKRTLQrasagpicrldswhaviqmpsgevvdpphslkptedcaldqglqiegalpekvncyegVFYNYFSIGMDAQVAYGFhhlrnekpylaqgpisnkliysgysctqgwfltpcisdpnlrldicelgslly

MDSPSSTTRIAArssmidsirgcglsgmridkedlrrklsipeyLRVAMSNAirrkegeppadtCQSDVIVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSLLY

*******************IRGCGLSGMRI****L*RKLSIPEYLRVA***********************************VVFI***********************QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPS**************DCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSL**

****SST*RIAARSSMIDSIRGCGLSGMRIDKEDLRRKLSIPEYLRV**********************IVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSLLY

***********ARSSMIDSIRGCGLSGMRIDKEDLRRKLSIPEYLRVAMSNAIRR********TCQSDVIVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSLLY

****SSTTRIAARSSMIDSIRGCGLSGMRIDKEDLRRKLSIPEYLRVAMSNA****************VIVDGNGVQPPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPS***************************LPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLRLDICELGSLLY

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		344	2.2.26 [Sep-21-2011]
Q10024		937	Putative diacylglycerol k	yes	no	0.566	0.208	0.355	1e-29
Q80UP3		929	Diacylglycerol kinase zet	yes	no	0.575	0.213	0.330	2e-26
O08560		929	Diacylglycerol kinase zet	yes	no	0.569	0.210	0.329	3e-26
Q13574		1117	Diacylglycerol kinase zet	no	no	0.569	0.175	0.329	3e-26
P20192		734	Diacylglycerol kinase alp	yes	no	0.601	0.282	0.307	4e-26
O88673		730	Diacylglycerol kinase alp	no	no	0.598	0.282	0.315	8e-26
O75912		1065	Diacylglycerol kinase iot	no	no	0.566	0.183	0.324	1e-25
A0JN54		734	Diacylglycerol kinase alp	no	no	0.601	0.282	0.303	2e-25
P23743		735	Diacylglycerol kinase alp	no	no	0.613	0.287	0.302	2e-25
Q91WG7		788	Diacylglycerol kinase gam	no	no	0.578	0.252	0.299	3e-25

>sp\|Q10024\|DGK5_CAEEL Putative diacylglycerol kinase K06A1.6 OS=Caenorhabditis elegans GN=dgk-5 PE=3 SV=2	Back alignment and function desciption

 Score =  130 bits (327), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 117/239 (48%), Gaps = 44/239 (18%)

Query: 79  PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELG 138
           P  P++VF+N +SGG  G +    L  L+   QVFD++ +K  +F   GL    K+    
Sbjct: 415 PSQPLLVFVNPKSGGNKGSKALHTLCWLLNPRQVFDITSLKGPKF---GLEMFRKVV--- 468

Query: 139 DFCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGW 198
                    ++RI+V GGDGTVGWVL ++  LN       PP+AI+PLGTGNDL+R  GW
Sbjct: 469 --------TQLRILVCGGDGTVGWVLSTLDNLNWPA---YPPMAIMPLGTGNDLARCMGW 517

Query: 199 GGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVDPPHSLKPTEDCAL---D 255
           GG F     S + + +   +   +  LD W   ++              P   C L   D
Sbjct: 518 GGVFSDEPISQLMQAILHETI--VTHLDRWRIDVE--------------PNTSCNLEEED 561

Query: 256 QGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSG 314
            G+Q   ALP        V  NYFSIG DA VA  FHH R+  P +    + N++ Y G
Sbjct: 562 DGMQ--SALPLT------VMTNYFSIGADAHVALQFHHSRSANPQMLNSRLKNRIAYGG 612

Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 0EC: 7

>sp\|Q80UP3\|DGKZ_MOUSE Diacylglycerol kinase zeta OS=Mus musculus GN=Dgkz PE=1 SV=2	Back alignment and function description

>sp\|O08560\|DGKZ_RAT Diacylglycerol kinase zeta OS=Rattus norvegicus GN=Dgkz PE=2 SV=1	Back alignment and function description

>sp\|Q13574\|DGKZ_HUMAN Diacylglycerol kinase zeta OS=Homo sapiens GN=DGKZ PE=1 SV=3	Back alignment and function description

>sp\|P20192\|DGKA_PIG Diacylglycerol kinase alpha OS=Sus scrofa GN=DGKA PE=1 SV=1	Back alignment and function description

>sp\|O88673\|DGKA_MOUSE Diacylglycerol kinase alpha OS=Mus musculus GN=Dgka PE=2 SV=2	Back alignment and function description

>sp\|O75912\|DGKI_HUMAN Diacylglycerol kinase iota OS=Homo sapiens GN=DGKI PE=1 SV=1	Back alignment and function description

>sp\|A0JN54\|DGKA_BOVIN Diacylglycerol kinase alpha OS=Bos taurus GN=DGKA PE=2 SV=1	Back alignment and function description

>sp\|P23743\|DGKA_HUMAN Diacylglycerol kinase alpha OS=Homo sapiens GN=DGKA PE=1 SV=3	Back alignment and function description

>sp\|Q91WG7\|DGKG_MOUSE Diacylglycerol kinase gamma OS=Mus musculus GN=Dgkg PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		344
224143809		484	predicted protein [Populus trichocarpa]	0.953	0.677	0.752	1e-152
359485049		477	PREDICTED: diacylglycerol kinase A-like	0.950	0.685	0.756	1e-150
255581896		484	diacylglycerol kinase, alpha, putative [	0.968	0.688	0.748	1e-147
224088396		484	predicted protein [Populus trichocarpa]	0.933	0.663	0.750	1e-144
449465226		493	PREDICTED: diacylglycerol kinase theta-l	0.968	0.675	0.682	1e-135
357479825		482	Diacylglycerol kinase [Medicago truncatu	0.956	0.682	0.686	1e-134
357479827		432	Diacylglycerol kinase [Medicago truncatu	0.956	0.761	0.686	1e-134
356562487		480	PREDICTED: probable diacylglycerol kinas	0.962	0.689	0.684	1e-134
356547779		480	PREDICTED: probable diacylglycerol kinas	0.947	0.679	0.689	1e-133
449517387		493	PREDICTED: diacylglycerol kinase theta-l	0.968	0.675	0.677	1e-133

>gi\|224143809\|ref\|XP_002325082.1\| predicted protein [Populus trichocarpa] gi\|222866516\|gb\|EEF03647.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/343 (75%), Positives = 299/343 (87%), Gaps = 15/343 (4%)

Query: 1   MDSPSSTTR-------IAARSSMIDSIRGCGLSGMRIDKEDLRRKLSIPEYLRVAMSNAI 53
           MDSP+++T        + +RSS+I+SIRGCGLSG+R++KEDL+RKLS+P+YLR A+ ++I
Sbjct: 1   MDSPTASTTEGSTARIVTSRSSVIESIRGCGLSGLRVNKEDLKRKLSMPKYLRHAIRDSI 60

Query: 54  RRKEGEPPADTCQSDVIVDGNGV---QPPEAPMVVFINSRSGGRHGPELKERLQELMGKE 110
             K+    AD  +     +GN     + PE PMVVF+NSRSGGRHGPELKERLQ+LMG+E
Sbjct: 61  NSKDVNAAADRYR-----EGNSAGREEAPEGPMVVFVNSRSGGRHGPELKERLQQLMGEE 115

Query: 111 QVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVGEL 170
           QVFDLS+VKP+EFV+YGL CLEKLA LGDFCAKDTR K+RI+VAGGDGTVGWVLGS+ EL
Sbjct: 116 QVFDLSDVKPNEFVEYGLGCLEKLAGLGDFCAKDTRDKLRILVAGGDGTVGWVLGSLTEL 175

Query: 171 NKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHA 230
           ++QGREPVPPVA+IPLGTGNDLSRSFGWGGSFPFAWKSAVKR+L RA  GP+CRLDSWH 
Sbjct: 176 HRQGREPVPPVAVIPLGTGNDLSRSFGWGGSFPFAWKSAVKRSLLRAITGPVCRLDSWHL 235

Query: 231 VIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYG 290
           ++ MP GEVVDPPHSLK T++C+LDQGL IEG LPEKVNCYEGVFYNYFSIGMDAQVAYG
Sbjct: 236 LMSMPRGEVVDPPHSLKSTDECSLDQGLTIEGELPEKVNCYEGVFYNYFSIGMDAQVAYG 295

Query: 291 FHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLR 333
           FHHLRNEKPYLAQGPISNKLIYSGY+CTQGWFLTPCISDP+LR
Sbjct: 296 FHHLRNEKPYLAQGPISNKLIYSGYTCTQGWFLTPCISDPSLR 338

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359485049\|ref\|XP_002271984.2\| PREDICTED: diacylglycerol kinase A-like [Vitis vinifera] gi\|297735318\|emb\|CBI17758.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255581896\|ref\|XP_002531747.1\| diacylglycerol kinase, alpha, putative [Ricinus communis] gi\|223528617\|gb\|EEF30636.1\| diacylglycerol kinase, alpha, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224088396\|ref\|XP_002308440.1\| predicted protein [Populus trichocarpa] gi\|222854416\|gb\|EEE91963.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449465226\|ref\|XP_004150329.1\| PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|357479825\|ref\|XP_003610198.1\| Diacylglycerol kinase [Medicago truncatula] gi\|355511253\|gb\|AES92395.1\| Diacylglycerol kinase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357479827\|ref\|XP_003610199.1\| Diacylglycerol kinase [Medicago truncatula] gi\|355511254\|gb\|AES92396.1\| Diacylglycerol kinase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356562487\|ref\|XP_003549502.1\| PREDICTED: probable diacylglycerol kinase 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|356547779\|ref\|XP_003542286.1\| PREDICTED: probable diacylglycerol kinase 3-like [Glycine max]	Back alignment and taxonomy information

>gi\|449517387\|ref\|XP_004165727.1\| PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		344
TAIR\|locus:2053978		488	DGK3 "diacylglycerol kinase 3"	0.956	0.674	0.644	4.2e-118
TAIR\|locus:2118791		492	DGK7 "diacylglycerol kinase 7"	0.944	0.660	0.648	4.2e-118
TAIR\|locus:2172575		487	DGK4 "diacylglycerol kinase 4"	0.962	0.679	0.623	5.6e-116
TAIR\|locus:2051343		509	DGK5 "diacylglycerol kinase 5"	0.680	0.459	0.391	2.8e-41
TAIR\|locus:2123703		466	DGK6 "diacylglycerol kinase 6"	0.718	0.530	0.397	6.8e-40
UNIPROTKB\|H0YJH4		202	DGKA "Diacylglycerol kinase al	0.25	0.425	0.410	3.9e-27
UNIPROTKB\|F1NL48		532	DGKE "Uncharacterized protein"	0.380	0.246	0.364	6.7e-23
UNIPROTKB\|E1C3R5		567	DGKE "Uncharacterized protein"	0.380	0.231	0.364	9e-23
MGI\|MGI:102952		730	Dgka "diacylglycerol kinase, a	0.270	0.127	0.425	1.2e-22
UNIPROTKB\|F1RSC5		425	DGKE "Uncharacterized protein"	0.380	0.308	0.378	2.1e-22

TAIR\|locus:2053978 DGK3 "diacylglycerol kinase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
 Identities = 223/346 (64%), Positives = 264/346 (76%)

Query:     1 MDSPSSTTR------IAARSSMIDS--IRGCGLSGMR---IDKEDLRRKLSIPEYLRVAM 49
             MDSP S T       +A+R S  DS  +RGCGL+ +    +DK +LR++L +PEYLR+AM
Sbjct:     1 MDSPVSKTDASKEKFVASRPSTADSKTMRGCGLANLAWVGVDKVELRQRLMMPEYLRLAM 60

Query:    50 SNAIRRKEGEPPADTCQSDVIVDGNGV--QPPEAPMVVFINSRSGGRHGPELKERLQELM 107
              + I+RK+     D     +++ G  V    P APMVVFIN  SGGRHGP LKERLQ+LM
Sbjct:    61 RDCIKRKDSSAIPD----HLLLPGGAVADMAPHAPMVVFINPNSGGRHGPVLKERLQQLM 116

Query:   108 GKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSV 167
              +EQVFDL+EVKPHEFV+YGL CLEK+A  GD CAK+ R ++RI+VAGGDGTVGWVLG +
Sbjct:   117 SEEQVFDLTEVKPHEFVRYGLGCLEKVAAEGDECAKECRARLRIMVAGGDGTVGWVLGCL 176

Query:   168 GELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDS 227
             GELNK G+  +PPV +IPLGTGNDLSRSFGWGGSFPFAW+SAVKRTL RAS GP+ RLDS
Sbjct:   177 GELNKDGKSQIPPVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLHRASMGPVARLDS 236

Query:   228 WHAVIQMPSGEVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQV 287
             W  ++ MPSGEVVDPP+SLKP E+  LDQGL      P     YEGVFYNY SIGMDAQV
Sbjct:   237 WKILVSMPSGEVVDPPYSLKPAEENELDQGLDAGIDAPPLAKAYEGVFYNYLSIGMDAQV 296

Query:   288 AYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWFLTPCISDPNLR 333
             AYGFHHLRN KPYLAQGPISNK+IYS + C+QGWF TPC++DP LR
Sbjct:   297 AYGFHHLRNTKPYLAQGPISNKIIYSSFGCSQGWFCTPCVNDPGLR 342

GO:0004143 "diacylglycerol kinase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0007205 "protein kinase C-activating G-protein coupled receptor signaling pathway" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR\|locus:2118791 DGK7 "diacylglycerol kinase 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2172575 DGK4 "diacylglycerol kinase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2051343 DGK5 "diacylglycerol kinase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2123703 DGK6 "diacylglycerol kinase 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|H0YJH4 DGKA "Diacylglycerol kinase alpha" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NL48 DGKE "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C3R5 DGKE "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

MGI\|MGI:102952 Dgka "diacylglycerol kinase, alpha" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RSC5 DGKE "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.107	0.737
3rd Layer	2.7.1	0.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		344
pfam00781		127	pfam00781, DAGK_cat, Diacylglycerol kinase catalyt	2e-27
smart00046		124	smart00046, DAGKc, Diacylglycerol kinase catalytic	1e-25
pfam00609		157	pfam00609, DAGK_acc, Diacylglycerol kinase accesso	7e-22
COG1597		301	COG1597, LCB5, Sphingosine kinase and enzymes rela	1e-10
smart00045		160	smart00045, DAGKa, Diacylglycerol kinase accessory	9e-07
PRK13054		300	PRK13054, PRK13054, lipid kinase; Reviewed	5e-06
TIGR00147		293	TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/Bm	2e-05
PRK13055		334	PRK13055, PRK13055, putative lipid kinase; Reviewe	4e-05
PRK13057		287	PRK13057, PRK13057, putative lipid kinase; Reviewe	8e-05
TIGR03702		293	TIGR03702, lip_kinase_YegS, lipid kinase YegS	1e-04
PRK13337		304	PRK13337, PRK13337, putative lipid kinase; Reviewe	1e-04
PRK12361		547	PRK12361, PRK12361, hypothetical protein; Provisio	2e-04
PRK13059		295	PRK13059, PRK13059, putative lipid kinase; Reviewe	4e-04
PRK11914		306	PRK11914, PRK11914, diacylglycerol kinase; Reviewe	0.004

>gnl\|CDD\|216116 pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain	Back alignment and domain information

 Score =  103 bits (260), Expect = 2e-27
 Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 22/147 (14%)

Query: 82  PMVVFINSRSGGRHG--PELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGD 139
             +V +N +SGG  G   ++  +L++ + + QV +  E             LE    LGD
Sbjct: 1   KALVIVNPKSGGGRGKKDKVLPKLRKALNEAQVVETEE-GGPAVA------LELARALGD 53

Query: 140 FCAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWG 199
           F          +VVAGGDGTV  VL  +           PP+ IIPLGTGND +R+ G  
Sbjct: 54  F-------DDLVVVAGGDGTVNEVLNGLAGR---EDRLKPPLGIIPLGTGNDFARALGIP 103

Query: 200 GSFPFAWKSAVKRTLQRASAGPICRLD 226
           G    A   A+   L +   G +  LD
Sbjct: 104 GDPDKA---ALLLILGQILRGDVVVLD 127

Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The catalytic domain is assumed from the finding of bacterial homologues. YegS is the Escherichia coli protein in this family whose crystal structure reveals an active site in the inter-domain cleft formed by four conserved sequence motifs, revealing a novel metal-binding site. The residues of this site are conserved across the family. Length = 127

>gnl\|CDD\|214487 smart00046, DAGKc, Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>gnl\|CDD\|216019 pfam00609, DAGK_acc, Diacylglycerol kinase accessory domain	Back alignment and domain information

>gnl\|CDD\|224513 COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>gnl\|CDD\|214486 smart00045, DAGKa, Diacylglycerol kinase accessory domain (presumed)	Back alignment and domain information

>gnl\|CDD\|237281 PRK13054, PRK13054, lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|161732 TIGR00147, TIGR00147, lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>gnl\|CDD\|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183857 PRK13057, PRK13057, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|163414 TIGR03702, lip_kinase_YegS, lipid kinase YegS	Back alignment and domain information

>gnl\|CDD\|183982 PRK13337, PRK13337, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183473 PRK12361, PRK12361, hypothetical protein; Provisional	Back alignment and domain information

>gnl\|CDD\|183858 PRK13059, PRK13059, putative lipid kinase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237021 PRK11914, PRK11914, diacylglycerol kinase; Reviewed	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		344
KOG1169		634	consensus Diacylglycerol kinase [Lipid transport a	100.0
KOG0782		1004	consensus Predicted diacylglycerol kinase [Signal	100.0
PRK12361		547	hypothetical protein; Provisional	100.0
PRK00861		300	putative lipid kinase; Reviewed	99.97
PRK11914		306	diacylglycerol kinase; Reviewed	99.97
COG1597		301	LCB5 Sphingosine kinase and enzymes related to euk	99.96
PRK13055		334	putative lipid kinase; Reviewed	99.96
PRK13059		295	putative lipid kinase; Reviewed	99.96
PRK13337		304	putative lipid kinase; Reviewed	99.96
PRK13057		287	putative lipid kinase; Reviewed	99.96
PLN02958		481	diacylglycerol kinase/D-erythro-sphingosine kinase	99.96
TIGR03702		293	lip_kinase_YegS lipid kinase YegS. Members of this	99.96
PRK13054		300	lipid kinase; Reviewed	99.95
TIGR00147		293	lipid kinase, YegS/Rv2252/BmrU family. The E. coli	99.94
PLN02204		601	diacylglycerol kinase	99.93
KOG1116		579	consensus Sphingosine kinase, involved in sphingol	99.92
PF00781		130	DAGK_cat: Diacylglycerol kinase catalytic domain;	99.9
KOG1170		1099	consensus Diacylglycerol kinase [Lipid transport a	99.89
smart00046		124	DAGKc Diacylglycerol kinase catalytic domain (pres	99.87
KOG1115		516	consensus Ceramide kinase [Lipid transport and met	99.66
PF00609		161	DAGK_acc: Diacylglycerol kinase accessory domain;	99.51
KOG4435		535	consensus Predicted lipid kinase [Lipid transport	99.4
PRK03708		277	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.53
smart00045		160	DAGKa Diacylglycerol kinase accessory domain (pres	98.46
PRK02645		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	98.37
COG3199		355	Predicted inorganic polyphosphate/ATP-NAD kinase [	98.04
PRK03378		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.85
PRK01231		295	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.73
PF01513		285	NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me	97.47
PRK14077		287	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	97.31
PRK03372		306	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.2
PRK02155		291	ppnK NAD(+)/NADH kinase family protein; Provisiona	97.15
PRK04539		296	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.1
PRK02649		305	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	97.0
PRK01911		292	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.98
PRK03501		264	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.87
PLN02935		508	Bifunctional NADH kinase/NAD(+) kinase	96.81
PRK14076		569	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	96.08
PRK00561		259	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	96.05
PRK14075		256	pnk inorganic polyphosphate/ATP-NAD kinase; Provis	95.91
PRK04885		265	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	95.81
PLN02727		986	NAD kinase	95.32
PRK01185		271	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	94.68
COG0061		281	nadF NAD kinase [Coenzyme metabolism]	94.32
PLN02929		301	NADH kinase	94.05
PRK02231		272	ppnK inorganic polyphosphate/ATP-NAD kinase; Provi	93.8
PRK04761		246	ppnK inorganic polyphosphate/ATP-NAD kinase; Revie	91.92
KOG4180		395	consensus Predicted kinase [General function predi	86.91
KOG2178		409	consensus Predicted sugar kinase [Carbohydrate tra	83.22
cd08171		345	GlyDH-like2 Glycerol dehydrogenase-like. Glycerol	81.39
cd08186		383	Fe-ADH8 Iron-containing alcohol dehydrogenase. Typ	81.34
cd08194		375	Fe-ADH6 Iron-containing alcohol dehydrogenases-lik	81.2
cd08172		347	GlyDH-like1 Glycerol dehydrogenases-like. Glycerol	81.17
cd08170		351	GlyDH Glycerol dehydrogenases (GlyDH) catalyzes ox	80.92
cd08197		355	DOIS 2-deoxy-scyllo-inosose synthase (DOIS) cataly	80.6

>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=5.6e-50  Score=405.13  Aligned_cols=294  Identities=35%  Similarity=0.549  Sum_probs=226.3

Q ss_pred             ccccchhee---hhhhcCCce-eEeeccccccccchhhhhHHhhhHHHhhhcCCCCCCcc------CCCccccCCCCCCC
Q 019227           10 IAARSSMID---SIRGCGLSG-MRIDKEDLRRKLSIPEYLRVAMSNAIRRKEGEPPADTC------QSDVIVDGNGVQPP   79 (344)
Q Consensus        10 ~~~~~~~~~---~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~   79 (344)
                      .+.+.|.|+   -|.+|-... .+||++.+++++.+|.++++.....+ .++.+......      -...+.......++
T Consensus       192 ~~~~~c~~~~~~~h~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (634)
T KOG1169|consen  192 LTGPRCGWCQIRVHDKCKSELSQECDLGELKDHILPPSTLRPARTARV-ASDHSGLPGEKSEEVTDAKKMQQLLVTDPPD  270 (634)
T ss_pred             ccccccceeeeeeecchHHHHhhhccChhhhhccCCceeeeccccccc-ccccccccccccccccccccccccccCCCCC
Confidence            345677775   344554433 69999999999999999998766621 00111010000      00111112466778


Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeec-ccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 019227           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVK-PHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG  158 (344)
Q Consensus        80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~-~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDG  158 (344)
                      ..|++||+||+||+.+|+.+.++++.+|++.|+|++.... |..        ...+.+.        .+..+|+||||||
T Consensus       271 ~~PLlVfvNpKSGg~~G~~ll~~f~~lLnp~QVfdl~~~~~p~~--------gL~l~~~--------~~~~riLVcGGDG  334 (634)
T KOG1169|consen  271 WRPLLVFVNPKSGGQQGERLLRRFRYLLNPVQVFDLLKRGGPRP--------GLTLFRD--------VPDFRILVCGGDG  334 (634)
T ss_pred             CcceEEEEecCCcccccHHHHHHHHHhcChhhEEecccCCCCch--------hHHHHHh--------CCcceEEEecCCC
Confidence            8999999999999999999999999999999999998764 432        2233332        2345999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCCC
Q 019227          159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE  238 (344)
Q Consensus       159 Tv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g~  238 (344)
                      ||+||++++.+....+....||+||+|+||||||||.|+||++||..+.. +.++|+.|..+.+.++|.|+|.+.++.++
T Consensus       335 TvGWVL~~i~~~n~~~~~~~PpVAilPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~  413 (634)
T KOG1169|consen  335 TVGWVLGCIDKLNKQNAIPPPPVAILPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE  413 (634)
T ss_pred             cchhhhhhHHHhhccccCCCCCeEEEecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc
Confidence            99999999988765566678999999999999999999999999998776 88899999999999999999999877665


Q ss_pred             ccCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeecccc
Q 019227          239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCT  318 (344)
Q Consensus       239 ~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~~~  318 (344)
                      ..  +|+.++.+.          +     ......+|+||||||+||+|+++||.+|+++|++|+||++||++|+.||+.
T Consensus       414 ~~--~~~~~~~~~----------~-----~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q  476 (634)
T KOG1169|consen  414 LV--QYSLKPPEK----------G-----DPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQ  476 (634)
T ss_pred             cc--cccccCCCc----------C-----CCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecch
Confidence            44  555543311          1     113467999999999999999999999999999999999999999999995


Q ss_pred             eeeccccCCCCCCceEEeecC
Q 019227          319 QGWFLTPCISDPNLRLDICEL  339 (344)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~  339 (344)
                      + ||+++|++..-=-.+.||+
T Consensus       477 ~-~f~~~ck~~~~~i~i~~~~  496 (634)
T KOG1169|consen  477 E-TFAARCKNLHLHIKIELDG  496 (634)
T ss_pred             h-hHHHhhcCCccceEEEEcc
Confidence            5 8999999953333445543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]	Back alignment and domain information

>PRK12361 hypothetical protein; Provisional	Back alignment and domain information

>PRK00861 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK11914 diacylglycerol kinase; Reviewed	Back alignment and domain information

>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	Back alignment and domain information

>PRK13055 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13059 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13337 putative lipid kinase; Reviewed	Back alignment and domain information

>PRK13057 putative lipid kinase; Reviewed	Back alignment and domain information

>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase	Back alignment and domain information

>TIGR03702 lip_kinase_YegS lipid kinase YegS	Back alignment and domain information

>PRK13054 lipid kinase; Reviewed	Back alignment and domain information

>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family	Back alignment and domain information

>PLN02204 diacylglycerol kinase	Back alignment and domain information

>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]	Back alignment and domain information

>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]	Back alignment and domain information

>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed)	Back alignment and domain information

>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases	Back alignment and domain information

>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]	Back alignment and domain information

>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed)	Back alignment and domain information

>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]	Back alignment and domain information

>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2	Back alignment and domain information

>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional	Back alignment and domain information

>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02935 Bifunctional NADH kinase/NAD(+) kinase	Back alignment and domain information

>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PLN02727 NAD kinase	Back alignment and domain information

>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>COG0061 nadF NAD kinase [Coenzyme metabolism]	Back alignment and domain information

>PLN02929 NADH kinase	Back alignment and domain information

>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional	Back alignment and domain information

>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed	Back alignment and domain information

>KOG4180 consensus Predicted kinase [General function prediction only]	Back alignment and domain information

>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd08171 GlyDH-like2 Glycerol dehydrogenase-like	Back alignment and domain information

>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase	Back alignment and domain information

>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like	Back alignment and domain information

>cd08172 GlyDH-like1 Glycerol dehydrogenases-like	Back alignment and domain information

>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation	Back alignment and domain information

>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		344
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	1e-11
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	1e-11
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	7e-11
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A Length = 337	Back alignment and structure

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 31/159 (19%)

Query: 74  NGVQPPEAPM-----VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGL 128
           +G+ P  + M      +  N  SG              + K       E   +       
Sbjct: 13  SGLVPRGSHMMRKRARIIYNPTSGKEQFKRELPDALIKLEKAGY----ETSAYA------ 62

Query: 129 ACLEKLAELGDFCAKDTRQKMRIVVA-GGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187
              EK+ +      +   +   +++A GGDGT+  V+  + E   +     P + +IP+G
Sbjct: 63  --TEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNR-----PKLGVIPMG 115

Query: 188 TGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLD 226
           T ND  R+       P     A    L     G   ++D
Sbjct: 116 TVNDFGRALHI----PNDIMGA----LDVIIEGHSTKVD 146

PyMOL of 2qv7

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A Length = 332	Back alignment and structure

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A Length = 304	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		344
3s40_A		304	Diacylglycerol kinase; structural genomics, the ce	99.97
2qv7_A		337	Diacylglycerol kinase DGKB; alpha-beta domain 1, b	99.95
2bon_A		332	Lipid kinase; DAG kinase, transferase; 1.90A {Esch	99.94
2an1_A		292	Putative kinase; structural genomics, PSI, protein	98.86
1yt5_A		258	Inorganic polyphosphate/ATP-NAD kinase; domain 1:	98.73
2i2c_A		272	Probable inorganic polyphosphate/ATP-NAD kinase 1;	98.71
1u0t_A		307	Inorganic polyphosphate/ATP-NAD kinase; alpha-beta	98.69
3afo_A		388	NADH kinase POS5; alpha/beta+BETA sandwich, ATP-bi	97.61
1z0s_A		278	Probable inorganic polyphosphate/ATP-NAD kinase; A	96.26
3pfn_A		365	NAD kinase; structural genomics consortium, SNP, S	94.16
3jzd_A		358	Iron-containing alcohol dehydrogenase; YP_298327.1	80.26

>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A	Back alignment and structure

Probab=99.97  E-value=4.3e-31  Score=252.05  Aligned_cols=170  Identities=22%  Similarity=0.211  Sum_probs=124.2

Q ss_pred             CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 019227           78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD  157 (344)
Q Consensus        78 ~~~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGD  157 (344)
                      ..+++++||+||+||++++.+.++++++.|.+.+. ++..     +.|++.+|+.++++++.      .+.+.||++|||
T Consensus         6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~-~~~~-----~~t~~~~~a~~~~~~~~------~~~d~vv~~GGD   73 (304)
T 3s40_A            6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFP-DLHI-----LHTKEQGDATKYCQEFA------SKVDLIIVFGGD   73 (304)
T ss_dssp             CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCS-EEEE-----EECCSTTHHHHHHHHHT------TTCSEEEEEECH
T ss_pred             CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCC-eEEE-----EEccCcchHHHHHHHhh------cCCCEEEEEccc
Confidence            45789999999999999998999999999987643 3332     34678899999998642      367899999999


Q ss_pred             hHHHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCC
Q 019227          158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG  237 (344)
Q Consensus       158 GTv~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g  237 (344)
                      ||||||+|+|...     ..++|||+||+||+|||||+||++    .++.+++    +.|.+|+.+++|+|++       
T Consensus        74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~~----~~~~~a~----~~i~~g~~~~iDlg~v-------  133 (304)
T 3s40_A           74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGVP----QNIAEAA----KLITKEHVKPVDVAKA-------  133 (304)
T ss_dssp             HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHHH----HHHTTCCEEEEEEEEE-------
T ss_pred             hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCCC----ccHHHHH----HHHHhCCeEEEEEEEE-------
Confidence            9999999999863     257899999999999999999995    4566554    4577899999999974       


Q ss_pred             CccCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeeccc
Q 019227          238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC  317 (344)
Q Consensus       238 ~~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~~  317 (344)
                                                       +++||+|++|+||||+|++.+++.++        ++.+++.|...++
T Consensus       134 ---------------------------------~~~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l  172 (304)
T 3s40_A          134 ---------------------------------NGQHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLSTI  172 (304)
T ss_dssp             ---------------------------------TTEEESSEEEEC--------------------------CHHHHTTTC
T ss_pred             ---------------------------------CCEEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHHHH
Confidence                                             14699999999999999999885442        3458889998888


Q ss_pred             cee
Q 019227          318 TQG  320 (344)
Q Consensus       318 ~~~  320 (344)
                      +++
T Consensus       173 ~~l  175 (304)
T 3s40_A          173 RTV  175 (304)
T ss_dssp             ---
T ss_pred             HHH
Confidence            875

PyMOL of 3s40

>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A	Back alignment and structure

>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A	Back alignment and structure

>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}	Back alignment and structure

>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}	Back alignment and structure

>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*	Back alignment and structure

>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A	Back alignment and structure

>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}	Back alignment and structure

>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*	Back alignment and structure

>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}	Back alignment and structure

>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		344
d2bona1		295	e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia	2e-07
d2qv7a1		312	e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Sta	3e-05

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Length = 295	Back information, alignment and structure


class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Lipid kinase YegS
species: Escherichia coli [TaxId: 562]

 Score = 49.6 bits (117), Expect = 2e-07
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 17/154 (11%)

Query: 84  VVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAK 143
           ++ +N +S       L+E +  L  +E+   +  V+           +E+  + G     
Sbjct: 4   LLILNGKSTD--NLPLREAIMLL--REEGMTI-HVRVTWEKGDAARYVEEARKFG----- 53

Query: 144 DTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFP 203
                  ++  GGDGT+  V      L +   + +P + I+PLGT ND + S G   +  
Sbjct: 54  ----VATVIAGGGDGTINEV---STALIQCEGDDIPALGILPLGTANDFATSVGIPEALD 106

Query: 204 FAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237
            A K A+           + +   +  +     G
Sbjct: 107 KALKLAIAGDAIAIDMAQVNKQTCFINMATGGFG 140

PyMOL of d2bona1

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Length = 312	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		344
d2qv7a1		312	Diacylglycerol kinase DgkB {Staphylococcus aureus	99.96
d2bona1		295	Lipid kinase YegS {Escherichia coli [TaxId: 562]}	99.96
d1u0ta_		302	Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob	96.86
d1z0sa1		249	Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa	93.93
d1o2da_		359	Alcohol dehydrogenase TM0920 {Thermotoga maritima	82.82

>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}	Back information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: NAD kinase/diacylglycerol kinase-like
superfamily: NAD kinase/diacylglycerol kinase-like
family: Diacylglycerol kinase-like
domain: Diacylglycerol kinase DgkB
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.96  E-value=6.4e-30  Score=241.30  Aligned_cols=168  Identities=20%  Similarity=0.193  Sum_probs=126.3

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEeeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 019227           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT  159 (344)
Q Consensus        80 ~~~vlvIvNP~SG~g~~~~~~~~i~~~L~~~~~~~l~~~~~~~~~t~~~g~a~~la~~~~~~~~~~~~~~~IVv~GGDGT  159 (344)
                      .|+++||+||+||++++.+.+.++.+.|.+. .+++..     +.|++.+|++++++++.     .++.+.||++|||||
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~-~~~~~~-----~~t~~~~~~~~~~~~~~-----~~~~d~ivv~GGDGT   70 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKRELPDALIKLEKA-GYETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT   70 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHHHHHHHHHHHT-TEEEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred             CceEEEEECcCCCCCcHHHHHHHHHHHHHHC-CCeEEE-----EEcCCccHHHHHHHHHH-----HcCCCEEEEEcCCcH
Confidence            4789999999999999988888888888764 455543     45677899999987642     356799999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCcEEEeecCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeEEEEEecCCCCc
Q 019227          160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV  239 (344)
Q Consensus       160 v~eVln~L~~~~~~~~~~~~plgIIP~GTgNDfArsLg~~~~~~~~~~~al~~~l~~i~~g~~~~iD~~~v~v~~~~g~~  239 (344)
                      ||||+|+|+..     ..++||||||+||||||||+||++    .++.+++    +.+..|+.+++|++++.        
T Consensus        71 v~~v~~~l~~~-----~~~~~l~iiP~GTgN~~ar~l~~~----~~~~~al----~~~~~~~~~~id~~~v~--------  129 (312)
T d2qv7a1          71 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHIP----NDIMGAL----DVIIEGHSTKVDIGKMN--------  129 (312)
T ss_dssp             HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTCC----SSHHHHH----HHHHHTCEEEEEEEEET--------
T ss_pred             HHHHHHHHHhh-----ccccceEEeecCCCCcchhhcccc----chHHHHH----HhhhcCCcEEecccccC--------
Confidence            99999999863     356899999999999999999995    4565554    45677999999998741        


Q ss_pred             cCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhHhhhhhccCCcccccccCcceeeeecccce
Q 019227          240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ  319 (344)
Q Consensus       240 ~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~f~N~~siGfDA~V~~~f~~~R~~~p~~~~~~~~NK~~Y~~~~~~~  319 (344)
                                                      .++|+|++|+||+|.++...++.+.        ++.+++.|...+++.
T Consensus       130 --------------------------------~~~f~~~~~~G~~a~~~~~~~~~~~--------~~~~~~~y~~~~~~~  169 (312)
T d2qv7a1         130 --------------------------------NRYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFEM  169 (312)
T ss_dssp             --------------------------------TEEESSEEEEECBCC---------------------CGGGSCCCTTTT
T ss_pred             --------------------------------ccceeeeeeeehhhHHHHHHHHhhh--------ccccchHHHHHHHHH
Confidence                                            3689999999999999998876543        344666777766655

PyMOL of d2qv7a1

>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure