Citrus Sinensis ID: 019278

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
MATASASSFISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGII
cccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccccHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHcccc
cccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHcccccccccHHccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccccccHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHccEEEHHHcHHHccccccccccHHHHHHHHHHccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEccccccccccccHHHHHHHHHHHHHcccc
MATASASSFISLLLISSLLLASfteaqkppvakglswtfydqscpkLESIVRKQIQNALKKDIGLAAGLIRIHFHdcfvqgcdgsvllegstseqnarpnlSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDsvalsggpnydlplgrrdsktfatvvnlpspfsntTVILNDFREKTFNARETVALsgghtvglahcpaftnrlypkqdptldktfannlkktcptsdsnnttvfdirspnvfdnkYYVDLMnrqglltsdqdlytdkrtrsIVTSFAVDQSLFFQEFANSMIKMSQLsvltgkqgeirakcsvknsnnLASVVEDVIEEAWSGII
MATASASSFISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTseqnarpnlslRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAtvvnlpspfsnttvILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKktcptsdsnnttvfdirspnvFDNKYYVDLMNRQglltsdqdlytdKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKcsvknsnnlasvvEDVIEEAWSGII
MatasassfislllisslllasftEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGII
********FISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE***************KEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNL**********NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAW****
***********LLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCP**DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLA*V***VIEEAWSGII
********FISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGII
****SASSFISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAW****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATASASSFISLLLISSLLLASFTEAQKPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGII
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query343 2.2.26 [Sep-21-2011]
Q96520358 Peroxidase 12 OS=Arabidop yes no 0.997 0.955 0.586 1e-124
P84516362 Cationic peroxidase SPC4 N/A no 0.953 0.903 0.530 1e-104
Q9SZB9325 Peroxidase 47 OS=Arabidop no no 0.874 0.923 0.454 1e-68
Q9LDN9346 Peroxidase 37 OS=Arabidop no no 0.892 0.884 0.444 1e-67
Q43735321 Peroxidase 27 OS=Arabidop no no 0.889 0.950 0.429 2e-67
Q9LXG3329 Peroxidase 56 OS=Arabidop no no 0.909 0.948 0.412 4e-67
O23237331 Peroxidase 49 OS=Arabidop no no 0.830 0.861 0.438 6e-67
Q42578335 Peroxidase 53 OS=Arabidop no no 0.880 0.901 0.443 7e-67
A5H454320 Peroxidase 66 OS=Zea mays N/A no 0.830 0.890 0.435 3e-66
P80679305 Peroxidase A2 OS=Armoraci N/A no 0.825 0.927 0.453 3e-66
>sp|Q96520|PER12_ARATH Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1 Back     alignment and function desciption
 Score =  443 bits (1140), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 210/358 (58%), Positives = 274/358 (76%), Gaps = 16/358 (4%)

Query: 1   MATASASSFISLLLISSLLLASF-----TEAQK----PPVAKGLSWTFYDQSCPKLESIV 51
           M  A ++  ++ L++ SL+  +       EA+K     P+ KGLSW FY ++CPK+E+I+
Sbjct: 1   MTKAYSTRVLTFLILISLMAVTLNLFPTVEAKKRSRDAPIVKGLSWNFYQKACPKVENII 60

Query: 52  RKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEAL 108
           RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL GS S   EQ++ PNL+LR++A 
Sbjct: 61  RKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLAGSASGPGEQSSIPNLTLRQQAF 120

Query: 109 KFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA----TVV 164
             +++LRA V K+CG+VVSC+DILALAARDSV LSGGP+Y +PLGRRDS  FA    T+ 
Sbjct: 121 VVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLN 180

Query: 165 NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFA 224
           NLP PF N + ++ DF  +  N  + VALSGGHT+G+AHCP+FT+RLYP QDPT+++ FA
Sbjct: 181 NLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIAHCPSFTDRLYPNQDPTMNQFFA 240

Query: 225 NNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSF 284
           N+LK+TCPT++S+NT V DIRSP+VFDNKYYVDLMNRQGL TSDQDL+ DKRTR IV SF
Sbjct: 241 NSLKRTCPTANSSNTQVNDIRSPDVFDNKYYVDLMNRQGLFTSDQDLFVDKRTRGIVESF 300

Query: 285 AVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGI 342
           A+DQ LFF  F  +MIKM Q+SVLTG QGEIR+ CS +N+ +  SV+E+ IEEA S I
Sbjct: 301 AIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSARNTQSFMSVLEEGIEEAISMI 358
Exhibits a Ca(2+)-pectate binding affinity which could be interpreted in vivo as a specificity to interact with the pectic structure of the cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|P84516|PER1_SORBI Cationic peroxidase SPC4 OS=Sorghum bicolor GN=SORBIDRAFT_03g046810 PE=1 SV=2 Back     alignment and function description
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function description
>sp|Q9LDN9|PER37_ARATH Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1 Back     alignment and function description
>sp|Q43735|PER27_ARATH Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXG3|PER56_ARATH Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1 Back     alignment and function description
>sp|O23237|PER49_ARATH Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2 Back     alignment and function description
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function description
>sp|A5H454|PER66_MAIZE Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1 Back     alignment and function description
>sp|P80679|PERA2_ARMRU Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
224066611354 predicted protein [Populus trichocarpa] 0.988 0.957 0.671 1e-134
218138216358 peroxidase 4 [Litchi chinensis] 0.909 0.871 0.705 1e-130
14031049354 peroxidase [Nicotiana tabacum] 0.994 0.963 0.645 1e-128
372477642357 glutathione peroxidase [Copaifera offici 0.979 0.941 0.641 1e-128
356576075356 PREDICTED: peroxidase 12-like [Glycine m 0.979 0.943 0.621 1e-125
310892579353 alkaline leaf peroxidase [Cynara cardunc 0.953 0.926 0.631 1e-124
255572307354 Peroxidase 12 precursor, putative [Ricin 0.903 0.875 0.662 1e-124
1389835355 peroxidase [Linum usitatissimum] 0.941 0.909 0.641 1e-124
310892577353 alkaline leaf peroxidase [Cynara cardunc 0.953 0.926 0.628 1e-123
253762012323 peroxidase 12, partial [Brassica rapa] 0.912 0.969 0.641 1e-123
>gi|224066611|ref|XP_002302162.1| predicted protein [Populus trichocarpa] gi|222843888|gb|EEE81435.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/353 (67%), Positives = 284/353 (80%), Gaps = 14/353 (3%)

Query: 1   MATASASSFISLLLISSLLLASF---TEAQKP-PVAKGLSWTFYDQSCPKLESIVRKQIQ 56
           MA+A A SF  +LLISSLL+AS+   TEA+   PV +GLSWTFY  SCPK+ESI+RKQ++
Sbjct: 1   MASA-AKSFTPVLLISSLLVASWFCATEAKSTLPVVQGLSWTFYQSSCPKVESIIRKQLE 59

Query: 57  NALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDD 113
              KK+IG AAGL+R+HFHDCFVQGCDGSVLL+GS S   EQ+A PNL+LR  A + +DD
Sbjct: 60  KVFKKEIGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEQDAPPNLTLRARAFEIIDD 119

Query: 114 LRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT----VVNLPSP 169
           LR R+HKECGRVVSC+DILA+AARDSV LSGGP+YD+PLGRRD   FAT    + NLP P
Sbjct: 120 LRERIHKECGRVVSCSDILAIAARDSVYLSGGPDYDVPLGRRDGLNFATRSATLDNLPPP 179

Query: 170 FSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKK 229
           F N   IL+    KTF+  + VALSGGHT+G++HC +FT+RLYP QDPT+DKTFANNLK 
Sbjct: 180 FDNADTILSSLAAKTFDPTDVVALSGGHTIGISHCSSFTDRLYPTQDPTMDKTFANNLKG 239

Query: 230 TCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAVDQS 289
            CP SDSN+TTV DIRSPN FDNKYYVDLMNRQGL TSDQDLYT+K+TR IVTSFA +QS
Sbjct: 240 ICPASDSNSTTVLDIRSPNNFDNKYYVDLMNRQGLFTSDQDLYTNKKTRGIVTSFAANQS 299

Query: 290 LFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNSNNLASVVEDVIEEAWSGI 342
           LFF++F  +MIKMSQLSVLTGK+GEIRA CSV+NS   +S +E V+EE +  +
Sbjct: 300 LFFEKFVVAMIKMSQLSVLTGKEGEIRASCSVRNSG--SSYLESVVEEGFEAL 350

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|218138216|gb|ACK57683.1| peroxidase 4 [Litchi chinensis] Back     alignment and taxonomy information
>gi|14031049|gb|AAK52084.1| peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|372477642|gb|AEX97056.1| glutathione peroxidase [Copaifera officinalis] Back     alignment and taxonomy information
>gi|356576075|ref|XP_003556160.1| PREDICTED: peroxidase 12-like [Glycine max] Back     alignment and taxonomy information
>gi|310892579|gb|ADP37430.1| alkaline leaf peroxidase [Cynara cardunculus var. scolymus] Back     alignment and taxonomy information
>gi|255572307|ref|XP_002527092.1| Peroxidase 12 precursor, putative [Ricinus communis] gi|223533515|gb|EEF35255.1| Peroxidase 12 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|1389835|gb|AAB02926.1| peroxidase [Linum usitatissimum] Back     alignment and taxonomy information
>gi|310892577|gb|ADP37429.1| alkaline leaf peroxidase [Cynara cardunculus var. scolymus] Back     alignment and taxonomy information
>gi|253762012|gb|ACT35470.1| peroxidase 12, partial [Brassica rapa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query343
TAIR|locus:2013001358 AT1G71695 [Arabidopsis thalian 0.912 0.874 0.631 5.5e-109
TAIR|locus:2138273346 Prx37 "peroxidase 37" [Arabido 0.892 0.884 0.444 6.7e-65
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.825 0.870 0.467 1.1e-64
TAIR|locus:2138278346 AT4G08780 [Arabidopsis thalian 0.886 0.878 0.431 1.6e-63
TAIR|locus:2028280346 AT1G44970 [Arabidopsis thalian 0.825 0.817 0.453 4.2e-63
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.830 0.861 0.438 1.4e-62
TAIR|locus:2053139337 AT2G18140 [Arabidopsis thalian 0.830 0.845 0.45 1.8e-62
TAIR|locus:2102087321 AT3G01190 [Arabidopsis thalian 0.845 0.903 0.438 1.8e-62
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.827 0.840 0.441 3.8e-62
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.842 0.862 0.454 3.8e-62
TAIR|locus:2013001 AT1G71695 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
 Identities = 202/320 (63%), Positives = 257/320 (80%)

Query:    30 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE 89
             P+ KGLSW FY ++CPK+E+I+RK+++   K+DIGLAA ++RIHFHDCFVQGC+ SVLL 
Sbjct:    39 PIVKGLSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLLA 98

Query:    90 GSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGP 146
             GS S   EQ++ PNL+LR++A   +++LRA V K+CG+VVSC+DILALAARDSV LSGGP
Sbjct:    99 GSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGP 158

Query:   147 NYDLPLGRRDSKTFA----TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLA 202
             +Y +PLGRRDS  FA    T+ NLP PF N + ++ DF  +  N  + VALSGGHT+G+A
Sbjct:   159 DYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLNITDLVALSGGHTIGIA 218

Query:   203 HCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQ 262
             HCP+FT+RLYP QDPT+++ FAN+LK+TCPT++S+NT V DIRSP+VFDNKYYVDLMNRQ
Sbjct:   219 HCPSFTDRLYPNQDPTMNQFFANSLKRTCPTANSSNTQVNDIRSPDVFDNKYYVDLMNRQ 278

Query:   263 GLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVK 322
             GL TSDQDL+ DKRTR IV SFA+DQ LFF  F  +MIKM Q+SVLTG QGEIR+ CS +
Sbjct:   279 GLFTSDQDLFVDKRTRGIVESFAIDQQLFFDYFTVAMIKMGQMSVLTGTQGEIRSNCSAR 338

Query:   323 NSNNLASVVEDVIEEAWSGI 342
             N+ +  SV+E+ IEEA S I
Sbjct:   339 NTQSFMSVLEEGIEEAISMI 358
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0010075 "regulation of meristem growth" evidence=RCA
GO:0048653 "anther development" evidence=RCA
TAIR|locus:2138273 Prx37 "peroxidase 37" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138278 AT4G08780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028280 AT1G44970 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053139 AT2G18140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102087 AT3G01190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q96520PER12_ARATH1, ., 1, 1, ., 1, ., 70.58650.99700.9553yesno
P84516PER1_SORBI1, ., 1, 1, ., 1, ., 70.53070.95330.9033N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.946
3rd Layer1.11.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-164
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-83
pfam00141180 pfam00141, peroxidase, Peroxidase 5e-69
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 5e-32
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-22
cd00692328 cd00692, ligninase, Ligninase and other manganese- 2e-14
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 2e-13
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 5e-13
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 3e-12
COG0376 730 COG0376, KatG, Catalase (peroxidase I) [Inorganic 2e-06
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 4e-06
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  458 bits (1182), Expect = e-164
 Identities = 153/299 (51%), Positives = 202/299 (67%), Gaps = 13/299 (4%)

Query: 34  GLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS-- 91
            LS  FY +SCP  ESIVR  ++ A+K D  LAA L+R+HFHDCFV+GCD SVLL+ +  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTAN 60

Query: 92  -TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDL 150
            TSE++A PNLSLR      +DD++A +   C  VVSCADILALAARD+V L+GGP+Y++
Sbjct: 61  NTSEKDAPPNLSLR--GFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEV 118

Query: 151 PLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 208
           PLGRRD +  +   V NLPSPF + + +++ F  K     + VALSG HT+G AHC +F+
Sbjct: 119 PLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSFS 178

Query: 209 NRLYP-----KQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQ 262
           +RLY        DPTLD  +A  L+K CP    ++T V  D  +PN FDN YY +L+  +
Sbjct: 179 DRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGR 238

Query: 263 GLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSV 321
           GLLTSDQ L +D RTR+IV  +A +Q  FF++FA +M+KM  + VLTG QGEIR  C V
Sbjct: 239 GLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRV 297

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|223453 COG0376, KatG, Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 343
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.49
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-103  Score=755.54  Aligned_cols=291  Identities=43%  Similarity=0.757  Sum_probs=276.9

Q ss_pred             CCCCCCcchhcccChhHHHHHHHHHHHHHHhCcChhHHHHHHHhhhccccCCCcceecCCCcccccccCCCCchhhhHHH
Q 019278           31 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF  110 (343)
Q Consensus        31 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~E~~~~~N~~l~~~g~~~  110 (343)
                      .+++|+++||++|||++|+||+++|++.+.+||+++|++|||+||||||+||||||||+++..|+++++|.++  +||++
T Consensus        21 ~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l--~Gf~~   98 (324)
T PLN03030         21 QGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLL--RGYDV   98 (324)
T ss_pred             hhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCc--chHHH
Confidence            3467999999999999999999999999999999999999999999999999999999977789999999998  89999


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHhhhhhhccCCCCCccCCCCCCCCCCccc--cCCCCCCCCCHHHHHHHHHHcCCCcc
Q 019278          111 VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT--VVNLPSPFSNTTVILNDFREKTFNAR  188 (343)
Q Consensus       111 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~--~~~lP~p~~~~~~l~~~F~~~Gl~~~  188 (343)
                      ||.||++||++||++||||||||+||||||+++|||.|+|++||||+++|.+  ..+||.|+.++++|++.|+++||+.+
T Consensus        99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~~  178 (324)
T PLN03030         99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNTQ  178 (324)
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999999999999999999999999999998866  45899999999999999999999999


Q ss_pred             CcEeeccCcccccccCCCcccccCC------CCCCcchHHHHHHHhhcCCCCCCC-CCccccCCCCcccChHHHHHHhhc
Q 019278          189 ETVALSGGHTVGLAHCPAFTNRLYP------KQDPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNR  261 (343)
Q Consensus       189 e~VaLsGaHTiG~~hc~~f~~Rly~------~~dp~~~~~~~~~L~~~Cp~~~~~-~~~~lD~~Tp~~FDN~Yy~~l~~~  261 (343)
                      |||+||||||||++||.+|.+|+||      .+||+||+.|+..|++.||..+++ +.+++|+.||.+|||+||+||+.+
T Consensus       179 DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll~~  258 (324)
T PLN03030        179 DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLKNG  258 (324)
T ss_pred             HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHHhc
Confidence            9999999999999999999999996      269999999999999999964333 267899999999999999999999


Q ss_pred             ccccchhhhcccCcchHHHHHHhhhCh----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccc
Q 019278          262 QGLLTSDQDLYTDKRTRSIVTSFAVDQ----SLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKN  323 (343)
Q Consensus       262 ~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~vN  323 (343)
                      +|+|+|||+|++|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus       259 rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        259 RGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             CCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            999999999999999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 1e-99
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 2e-67
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 5e-66
1sch_A294 Peanut Peroxidase Length = 294 9e-66
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 6e-65
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 1e-64
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-64
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 7e-64
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 7e-64
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 9e-64
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 9e-64
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 2e-63
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 3e-63
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 4e-63
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 6e-63
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 1e-62
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 3e-62
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 6e-62
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-61
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 4e-14
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 2e-12
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-12
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 2e-12
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 2e-12
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 2e-12
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-12
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 2e-12
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-12
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 2e-12
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 3e-12
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 3e-12
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 2e-10
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 2e-10
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 3e-10
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 2e-09
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 3e-09
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 5e-09
1krj_A294 Engineering Calcium-Binding Site Into Cytochrome C 6e-09
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 8e-09
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-08
1cck_A291 Altering Substrate Specificity Of Cytochrome C Pero 3e-08
4ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 3e-08
1a2f_A291 Probing The Strength And Character Of An Asp-His-X 6e-08
4a78_A296 Cytochrome C Peroxidase M119w In Complex With Guiac 7e-08
1bva_A294 Manganese Binding Mutant In Cytochrome C Peroxidase 7e-08
2pcb_A296 Crystal Structure Of A Complex Between Electron Tra 7e-08
2cep_A296 Role Of Met-230 In Intramolecular Electron Transfer 8e-08
2gb8_A294 Solution Structure Of The Complex Between Yeast Iso 8e-08
1cpg_A296 A Cation Binding Motif Stabilizes The Compound I Ra 8e-08
1bep_A291 Effect Of Unnatural Heme Substitution On Kinetics O 8e-08
1cca_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 8e-08
2anz_A294 Cytochrome C Peroxidase In Complex With 2,6-Diamino 9e-08
1bek_A291 Effect Of Unnatural Heme Substitution On Kinetics O 9e-08
1bem_A291 Interaction Between Proximal And Distals Regions Of 9e-08
2aqd_A294 Cytochrome C Peroxidase (Ccp) In Complex With 2,5- 9e-08
1cpd_A296 A Cation Binding Motif Stabilizes The Compound I Ra 9e-08
2ia8_A291 Kinetic And Crystallographic Studies Of A Redesigne 9e-08
1beq_A291 Interaction Between Proximal And Distals Regions Of 9e-08
3r98_A293 Joint Neutron And X-Ray Structure Of Cytochrome C P 9e-08
6ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 9e-08
2rbu_X292 Cytochrome C Peroxidase In Complex With Cyclopentan 9e-08
1bej_A291 Interaction Between Proximal And Distals Regions Of 1e-07
2xil_A294 The Structure Of Cytochrome C Peroxidase Compound I 1e-07
1kok_A294 Crystal Structure Of Mesopone Cytochrome C Peroxida 1e-07
1dj1_A291 Crystal Structure Of R48a Mutant Of Cytochrome C Pe 1e-07
1ebe_A294 Laue Diffraction Study On The Structure Of Cytochro 1e-07
4a7m_A296 Cytochrome C Peroxidase S81w Mutant Length = 296 1e-07
7ccp_A296 Effect Of Arginine-48 Replacement On The Reaction B 1e-07
2xj5_A294 The Structure Of Cytochrome C Peroxidase Compound I 1e-07
5ccp_A296 Histidine 52 Is A Critical Residue For Rapid Format 1e-07
3ccx_A294 Altering Substrate Specificity At The Heme Edge Of 1e-07
1dcc_A296 2.2 Angstrom Structure Of Oxyperoxidase: A Model Fo 1e-07
1cyf_A296 Identifying The Physiological Electron Transfer Sit 1e-07
1mk8_A294 Crystal Structure Of A Mutant Cytochrome C Peroxida 1e-07
4ccx_A294 Altering Substrate Specificity At The Heme Edge Of 1e-07
1kxm_A290 Crystal Structure Of Cytochrome C Peroxidase With A 2e-07
3exb_A295 Crystal Structure Of Cytochrome C Peroxidase With A 2e-07
1kxn_A289 Crystal Structure Of Cytochrome C Peroxidase With A 2e-07
2v23_A296 Structure Of Cytochrome C Peroxidase Mutant N184r Y 3e-07
1a2g_A291 Probing The Strength And Character Of An Asp-His-X 3e-07
1ccb_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 3e-07
4a71_A296 Cytochrome C Peroxidase In Complex With Phenol Leng 3e-07
2v2e_A294 Structure Of Isoniazid (Inh) Bound To Cytochrome C 3e-07
3m23_A291 Crystallographic And Single Crystal Spectral Analys 3e-07
2ccp_A296 X-Ray Structures Of Recombinant Yeast Cytochrome C 3e-07
1cmu_A294 The Role Of Aspartate-235 In The Binding Of Cations 4e-07
1ccl_A291 Probing The Strength And Character Of An Asp-His-X 4e-07
1cci_A294 How Flexible Are Proteins? Trapping Of A Flexible L 4e-07
2x07_A293 Cytochrome C Peroxidase: Engineered Ascorbate Bindi 4e-07
3e2n_A287 Engineering Ascorbate Peroxidase Activity Into Cyto 4e-07
1s6v_A294 Structure Of A Cytochrome C Peroxidase-Cytochrome C 4e-07
1ccc_A297 The Asp-His-Fe Triad Of Cytochrome C Peroxidase Con 7e-07
1dse_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 9e-07
1cce_A291 Construction Of A Bis-Aquo Heme Enzyme And Replacem 1e-06
1ds4_A292 Cytochrome C Peroxidase H175g Mutant, Imidazole Com 1e-06
3e2o_A294 Crystal Structure Of Cytochrome C Peroxidase, N184r 2e-06
1mn2_A357 Manganese Peroxidase Substrate Binding Site Mutant 1e-05
1mn1_A357 Manganese Peroxidase Substrate Binding Site Mutant 1e-05
1yyd_A357 High Resolution Crystal Structure Of Manganese Pero 2e-05
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure 
Iteration: 1

 Score =  359 bits (922), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 173/304 (56%), Positives = 226/304 (74%), Gaps = 8/304 (2%)
Query: 28  KPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVL 87
           +PPVA GLS+ FY Q+CP+ ESIVR+ +Q A++KDIGLAAGL+R+HFHDCFVQGCD SVL
Sbjct: 2   EPPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVL 61
Query: 88  LEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALS 143
           L+GS +   EQ A PNL+LR  A K V+D+R R+ +EC G VVSC+DILALAARDSV +S
Sbjct: 62  LDGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVS 121
Query: 144 GGPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 199
           GGP+Y +PLGRRDS++FA+    + +LP P SN   +L        +A + V +SGGHT+
Sbjct: 122 GGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTI 181
Query: 200 GLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLM 259
           GLAHC +F +RL+P+ DPT+  TF + LK+TCP   ++  TV D+R+PNVFDNKYY+DL+
Sbjct: 182 GLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLV 241
Query: 260 NRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
           NR+GL  SDQDL+T+  TR IV  FA  Q  FF++F  S+ KM Q+ V T  QGE+R  C
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301
Query: 320 SVKN 323
           SV+N
Sbjct: 302 SVRN 305
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1CCK|A Chain A, Altering Substrate Specificity Of Cytochrome C Peroxidase Towards A Small Molecular Substrate Peroxidase By Substituting Tyrosine For Phe 202 Length = 291 Back     alignment and structure
>pdb|4CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1A2F|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|4A78|A Chain A, Cytochrome C Peroxidase M119w In Complex With Guiacol Length = 296 Back     alignment and structure
>pdb|1BVA|A Chain A, Manganese Binding Mutant In Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|2PCB|A Chain A, Crystal Structure Of A Complex Between Electron Transfer Partners, Cytochrome C Peroxidase And Cytochrome C Length = 296 Back     alignment and structure
>pdb|2CEP|A Chain A, Role Of Met-230 In Intramolecular Electron Transfer Between The Oxyferryl Heme And Trp 191 In Cytochrome C Peroxidase Compound Ii Length = 296 Back     alignment and structure
>pdb|2GB8|A Chain A, Solution Structure Of The Complex Between Yeast Iso-1- Cytochrome C And Yeast Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CPG|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|1BEP|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1CCA|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|2ANZ|A Chain A, Cytochrome C Peroxidase In Complex With 2,6-Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1BEK|A Chain A, Effect Of Unnatural Heme Substitution On Kinetics Of Electron Transfer In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEM|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2AQD|A Chain A, Cytochrome C Peroxidase (Ccp) In Complex With 2,5- Diaminopyridine Length = 294 Back     alignment and structure
>pdb|1CPD|A Chain A, A Cation Binding Motif Stabilizes The Compound I Radical Of Cytochrome C Peroxidase Length = 296 Back     alignment and structure
>pdb|2IA8|A Chain A, Kinetic And Crystallographic Studies Of A Redesigned Manganese-Binding Site In Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1BEQ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|3R98|A Chain A, Joint Neutron And X-Ray Structure Of Cytochrome C Peroxidase Length = 293 Back     alignment and structure
>pdb|6CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|2RBU|X Chain X, Cytochrome C Peroxidase In Complex With Cyclopentane-Carboximidamide Length = 292 Back     alignment and structure
>pdb|1BEJ|A Chain A, Interaction Between Proximal And Distals Regions Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|2XIL|A Chain A, The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|1KOK|A Chain A, Crystal Structure Of Mesopone Cytochrome C Peroxidase (Mpccp) Length = 294 Back     alignment and structure
>pdb|1DJ1|A Chain A, Crystal Structure Of R48a Mutant Of Cytochrome C Peroxidase Length = 291 Back     alignment and structure
>pdb|1EBE|A Chain A, Laue Diffraction Study On The Structure Of Cytochrome C Peroxidase Compound I Length = 294 Back     alignment and structure
>pdb|4A7M|A Chain A, Cytochrome C Peroxidase S81w Mutant Length = 296 Back     alignment and structure
>pdb|7CCP|A Chain A, Effect Of Arginine-48 Replacement On The Reaction Between Cytochrome C Peroxidase And Hydrogen Peroxide Length = 296 Back     alignment and structure
>pdb|2XJ5|A Chain A, The Structure Of Cytochrome C Peroxidase Compound Ii Length = 294 Back     alignment and structure
>pdb|5CCP|A Chain A, Histidine 52 Is A Critical Residue For Rapid Formation Of Cytochrome C Peroxidase Compound I Length = 296 Back     alignment and structure
>pdb|3CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1DCC|A Chain A, 2.2 Angstrom Structure Of Oxyperoxidase: A Model For The Enzyme:peroxide Complex Length = 296 Back     alignment and structure
>pdb|1CYF|A Chain A, Identifying The Physiological Electron Transfer Site Of Cytochrome C Peroxidase By Structure-Based Engineering Length = 296 Back     alignment and structure
>pdb|1MK8|A Chain A, Crystal Structure Of A Mutant Cytochrome C Peroxidase Showing A Novel Trp-Tyr Covalent Cross-Link Length = 294 Back     alignment and structure
>pdb|4CCX|A Chain A, Altering Substrate Specificity At The Heme Edge Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1KXM|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 290 Back     alignment and structure
>pdb|3EXB|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Pathway Excised In A Complex With A Peptide Wire Length = 295 Back     alignment and structure
>pdb|1KXN|A Chain A, Crystal Structure Of Cytochrome C Peroxidase With A Proposed Electron Transfer Pathway Excised To Form A Ligand Binding Channel Length = 289 Back     alignment and structure
>pdb|2V23|A Chain A, Structure Of Cytochrome C Peroxidase Mutant N184r Y36a Length = 296 Back     alignment and structure
>pdb|1A2G|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CCB|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|4A71|A Chain A, Cytochrome C Peroxidase In Complex With Phenol Length = 296 Back     alignment and structure
>pdb|2V2E|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytochrome C Peroxidase Mutant N184r Y36a Length = 294 Back     alignment and structure
>pdb|3M23|A Chain A, Crystallographic And Single Crystal Spectral Analysis Of The Peroxidase Ferryl Intermediate Length = 291 Back     alignment and structure
>pdb|2CCP|A Chain A, X-Ray Structures Of Recombinant Yeast Cytochrome C Peroxidase And Three Heme-Cleft Mutants Prepared By Site-Directed Mutagenesis Length = 296 Back     alignment and structure
>pdb|1CMU|A Chain A, The Role Of Aspartate-235 In The Binding Of Cations To An Artificial Cavity At The Radical Site Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure
>pdb|1CCL|A Chain A, Probing The Strength And Character Of An Asp-His-X Hydrogen Bond By Introducing Buried Charges Length = 291 Back     alignment and structure
>pdb|1CCI|A Chain A, How Flexible Are Proteins? Trapping Of A Flexible Loop Length = 294 Back     alignment and structure
>pdb|2X07|A Chain A, Cytochrome C Peroxidase: Engineered Ascorbate Binding Site Length = 293 Back     alignment and structure
>pdb|3E2N|A Chain A, Engineering Ascorbate Peroxidase Activity Into Cytochrome C Peroxidase Length = 287 Back     alignment and structure
>pdb|1S6V|A Chain A, Structure Of A Cytochrome C Peroxidase-Cytochrome C Site Specific Cross-Link Length = 294 Back     alignment and structure
>pdb|1CCC|A Chain A, The Asp-His-Fe Triad Of Cytochrome C Peroxidase Controls The Reduction Potential, Electronic Structure, And Coupling Of The Tryptophan Free-Radical To The Heme Length = 297 Back     alignment and structure
>pdb|1DSE|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, With Phosphate Bound, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|1CCE|A Chain A, Construction Of A Bis-Aquo Heme Enzyme And Replacement With Exogenous Ligand Length = 291 Back     alignment and structure
>pdb|1DS4|A Chain A, Cytochrome C Peroxidase H175g Mutant, Imidazole Complex, Ph 6, 100k Length = 292 Back     alignment and structure
>pdb|3E2O|A Chain A, Crystal Structure Of Cytochrome C Peroxidase, N184r Mutant Length = 294 Back     alignment and structure
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q, D179n Length = 357 Back     alignment and structure
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n Length = 357 Back     alignment and structure
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase Length = 357 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query343
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-174
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-162
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-162
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-161
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-160
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-160
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-159
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 6e-89
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 6e-81
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 5e-78
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 2e-73
2e39_A344 Peroxidase; heme protein, coordination geometry of 2e-69
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 3e-68
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 3e-68
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 9e-25
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 3e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-09
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 5e-05
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
 Score =  484 bits (1248), Expect = e-174
 Identities = 173/306 (56%), Positives = 224/306 (73%), Gaps = 8/306 (2%)

Query: 29  PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL 88
           PPVA GLS+ FY Q+CP+ ESIVR+ +Q A++KDIGLAAGL+R+HFHDCFVQGCD SVLL
Sbjct: 3   PPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLL 62

Query: 89  EGS---TSEQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALSG 144
           +GS     EQ A PNL+LR  A K V+D+R R+ +EC G VVSC+DILALAARDSV +SG
Sbjct: 63  DGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSG 122

Query: 145 GPNYDLPLGRRDSKTFAT----VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVG 200
           GP+Y +PLGRRDS++FA+    + +LP P SN   +L        +A + V +SGGHT+G
Sbjct: 123 GPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIG 182

Query: 201 LAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMN 260
           LAHC +F +RL+P+ DPT+  TF + LK+TCP   ++  TV D+R+PNVFDNKYY+DL+N
Sbjct: 183 LAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLVN 242

Query: 261 RQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCS 320
           R+GL  SDQDL+T+  TR IV  FA  Q  FF++F  S+ KM Q+ V T  QGE+R  CS
Sbjct: 243 REGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCS 302

Query: 321 VKNSNN 326
           V+N   
Sbjct: 303 VRNPGP 308
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=8.8e-105  Score=763.48  Aligned_cols=288  Identities=47%  Similarity=0.814  Sum_probs=276.8

Q ss_pred             CCcchhcccChhHHHHHHHHHHHHHHhCcChhHHHHHHHhhhccccCCCcceecCCC---cccccccCCC-CchhhhHHH
Q 019278           35 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNL-SLRKEALKF  110 (343)
Q Consensus        35 L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~---~~E~~~~~N~-~l~~~g~~~  110 (343)
                      |+++||++|||++|+|||++|++++.++++++|++|||+||||||+||||||||+++   .+|+++++|. +|  |||++
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t~~~~~Ek~~~~N~~~l--rgf~v   79 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIPNNPSL--RGFEV   79 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCBTTBCCGGGSTTTTTTC--CCHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCCCCCcccccCCCcccch--HHHHH
Confidence            789999999999999999999999999999999999999999999999999999976   4799999999 67  89999


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHhhhhhhccCCCCCccCCCCCCCCCCccc---cCCCCCCCCCHHHHHHHHHHcCCCc
Q 019278          111 VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT---VVNLPSPFSNTTVILNDFREKTFNA  187 (343)
Q Consensus       111 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~Gl~~  187 (343)
                      ||+||++||+.||++||||||||||||+||+++|||.|+|++||+|++++..   .++||+|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999887   4689999999999999999999999


Q ss_pred             cCcEeeccCcccccccCCCcccccCC-----CCCCcchHHHHHHHhhcCCCCCC--CC-CccccCCCCcccChHHHHHHh
Q 019278          188 RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDS--NN-TTVFDIRSPNVFDNKYYVDLM  259 (343)
Q Consensus       188 ~e~VaLsGaHTiG~~hc~~f~~Rly~-----~~dp~~~~~~~~~L~~~Cp~~~~--~~-~~~lD~~Tp~~FDN~Yy~~l~  259 (343)
                      +||||||||||||++||.+|.+|+|+     .+||+||+.|++.|++.||..++  ++ ++++|..||.+|||+||+||+
T Consensus       160 ~d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL~  239 (304)
T 3hdl_A          160 DEMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQ  239 (304)
T ss_dssp             HHHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HHhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHHH
Confidence            99999999999999999999999996     37999999999999999998654  43 788999999999999999999


Q ss_pred             hcccccchhhhcccCcchHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccccC
Q 019278          260 NRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS  324 (343)
Q Consensus       260 ~~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~vN~  324 (343)
                      .++|||+|||+|+.|++|+++|++||.|++.|+++|++||+||++|||+||.+||||++|++||+
T Consensus       240 ~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             TTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             hCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999993
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 343
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-125
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-115
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-114
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-112
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-110
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-108
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 8e-72
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 6e-69
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 6e-66
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-56
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 4e-51
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-46
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 1e-06
d1mwva2308 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Bur 3e-05
d1itka1406 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Arch 1e-04
d1u2ka_292 a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholder 2e-04
d2ccaa1410 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Myco 4e-04
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]

 Score =  358 bits (920), Expect = e-125
 Identities = 173/307 (56%), Positives = 224/307 (72%), Gaps = 8/307 (2%)

Query: 28  KPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVL 87
           +PPVA GLS+ FY Q+CP+ ESIVR+ +Q A++KDIGLAAGL+R+HFHDCFVQGCD SVL
Sbjct: 2   EPPVAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVL 61

Query: 88  LEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKEC-GRVVSCADILALAARDSVALS 143
           L+GS     EQ A PNL+LR  A K V+D+R R+ +EC G VVSC+DILALAARDSV +S
Sbjct: 62  LDGSATGPGEQQAPPNLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVS 121

Query: 144 GGPNYDLPLGRRDSKTFATVV----NLPSPFSNTTVILNDFREKTFNARETVALSGGHTV 199
           GGP+Y +PLGRRDS++FA+      +LP P SN   +L        +A + V +SGGHT+
Sbjct: 122 GGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTI 181

Query: 200 GLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLM 259
           GLAHC +F +RL+P+ DPT+  TF + LK+TCP   ++  TV D+R+PNVFDNKYY+DL+
Sbjct: 182 GLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLV 241

Query: 260 NRQGLLTSDQDLYTDKRTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKC 319
           NR+GL  SDQDL+T+  TR IV  FA  Q  FF++F  S+ KM Q+ V T  QGE+R  C
Sbjct: 242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNC 301

Query: 320 SVKNSNN 326
           SV+N   
Sbjct: 302 SVRNPGP 308
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 308 Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 406 Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 292 Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Length = 410 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query343
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=5.2e-100  Score=730.29  Aligned_cols=290  Identities=47%  Similarity=0.808  Sum_probs=278.4

Q ss_pred             CCCcchhcccChhHHHHHHHHHHHHHHhCcChhHHHHHHHhhhccccCCCcceecCCC---cccccccCCCCchhhhHHH
Q 019278           34 GLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKF  110 (343)
Q Consensus        34 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~---~~E~~~~~N~~l~~~g~~~  110 (343)
                      ||+.+||++|||++|+|||++|++.+.+|++++|++|||+||||||+||||||||+++   .+|+++++|.++. +||++
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~~~~~~E~~~~~N~~~~-~g~~~   79 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALPNINSI-RGLDV   79 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCCSSCCCGGGSTTTTTTC-CCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCCCCccccccCCcccccc-hhHHH
Confidence            7999999999999999999999999999999999999999999999999999999976   5799999999866 89999


Q ss_pred             HHHHHHHHHhhcCCCCCHHHHHHHhhhhhhccCCCCCccCCCCCCCCCCccc---cCCCCCCCCCHHHHHHHHHHcCCCc
Q 019278          111 VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT---VVNLPSPFSNTTVILNDFREKTFNA  187 (343)
Q Consensus       111 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~Gl~~  187 (343)
                      ||.||++||+.||++|||||||+||||+||+.+|||.|+|++||+|+++++.   ..+||.|+.++++|++.|++||||.
T Consensus        80 id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T d1fhfa_          80 VNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999876   5689999999999999999999999


Q ss_pred             cCcEeeccCcccccccCCCcccccCC-----CCCCcchHHHHHHHhhcCCCCCCCC-CccccCCCCcccChHHHHHHhhc
Q 019278          188 RETVALSGGHTVGLAHCPAFTNRLYP-----KQDPTLDKTFANNLKKTCPTSDSNN-TTVFDIRSPNVFDNKYYVDLMNR  261 (343)
Q Consensus       188 ~e~VaLsGaHTiG~~hc~~f~~Rly~-----~~dp~~~~~~~~~L~~~Cp~~~~~~-~~~lD~~Tp~~FDN~Yy~~l~~~  261 (343)
                      +|||||+||||||++||.+|..|+|+     .+||++++.|+..|++.||..+... .+.+|..||.+|||+||++++.+
T Consensus       160 ~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~~~  239 (304)
T d1fhfa_         160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQL  239 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHHTT
T ss_pred             HHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHhhc
Confidence            99999999999999999999999995     4799999999999999999866544 77899999999999999999999


Q ss_pred             ccccchhhhcccCc--chHHHHHHhhhChHHHHHHHHHHHHHhhcCCCCCCCCCccccccccccC
Q 019278          262 QGLLTSDQDLYTDK--RTRSIVTSFAVDQSLFFQEFANSMIKMSQLSVLTGKQGEIRAKCSVKNS  324 (343)
Q Consensus       262 ~glL~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgvltG~~GeIR~~C~~vN~  324 (343)
                      +|+|+||++|+.||  +|+++|++||.|++.|+++|++||+||++||||||.+||||++|+++|.
T Consensus       240 ~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             CCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             CcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            99999999999996  6999999999999999999999999999999999999999999999994
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure