Citrus Sinensis ID: 019395
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | 2.2.26 [Sep-21-2011] | |||||||
| Q7Z9L3 | 405 | Glucan 1,3-beta-glucosida | yes | no | 0.888 | 0.748 | 0.321 | 3e-39 | |
| B8N151 | 405 | Probable glucan 1,3-beta- | N/A | no | 0.888 | 0.748 | 0.321 | 3e-39 | |
| Q12700 | 425 | Glucan 1,3-beta-glucosida | N/A | no | 0.862 | 0.691 | 0.325 | 1e-38 | |
| Q12725 | 421 | Glucan 1,3-beta-glucosida | yes | no | 0.891 | 0.722 | 0.300 | 3e-38 | |
| P29717 | 438 | Glucan 1,3-beta-glucosida | N/A | no | 0.850 | 0.662 | 0.308 | 2e-37 | |
| A1D4Q5 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.894 | 0.733 | 0.352 | 3e-37 | |
| B0XN12 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.876 | 0.718 | 0.335 | 4e-37 | |
| Q4WK60 | 416 | Probable glucan 1,3-beta- | yes | no | 0.876 | 0.718 | 0.335 | 4e-37 | |
| Q96V64 | 426 | Glucan 1,3-beta-glucosida | N/A | no | 0.841 | 0.673 | 0.336 | 9e-37 | |
| A1CRV0 | 415 | Probable glucan 1,3-beta- | N/A | no | 0.888 | 0.730 | 0.342 | 2e-36 |
| >sp|Q7Z9L3|EXGA_ASPOR Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 49/352 (13%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 203
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 204 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 263
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 264 ASDLGAVTTSNGPLTFVGEWT-------------------------------CE------ 286
L A S+ P+ VGEWT C
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLATGF 339
Query: 287 -WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ D + D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 340 VSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 8 |
| >sp|B8N151|EXGA_ASPFN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/352 (32%), Positives = 166/352 (47%), Gaps = 49/352 (13%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F + E+ +T G ++A L HW S+++ DF+ ++ G+N VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W A P P+V G + LD A +WA G+KV++DLH APGSQNG ++S R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQW 165
Query: 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKY 203
V T+ D LA RY ++AAIE INEP P GV L+ YY + Y V KY
Sbjct: 166 QQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNKY 225
Query: 204 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQR 263
+ V+ + P + F + S+VV+D H+Y++F N +++ +ID V
Sbjct: 226 NAGTSVVYGDGFLPVESWN--GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQFA 283
Query: 264 ASDLGAVTTSNGPLTFVGEWT-------------------------------CE------ 286
L A S+ P+ VGEWT C
Sbjct: 284 HQHLEA---SDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLATGF 339
Query: 287 -WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ D + D +RF AQLD + + GW +W K E A W + ++E G
Sbjct: 340 VSKLSDEERSDMRRFIEAQLDAFELKS-GWVFWTWKTEGAPGWDMSDLLEAG 390
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12700|EXG_SCHOC Glucan 1,3-beta-glucosidase OS=Schwanniomyces occidentalis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 161/335 (48%), Gaps = 41/335 (12%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G D A QVL+ HW ++ + DFK + G+NAVRIP+G+W A P+V
Sbjct: 78 EYHFTQKLGKDAAQQVLEQHWKTWYKENDFKMMLKYGLNAVRIPIGYW-AFKLLDYDPYV 136
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 156
G K LD A DWA KY +KV +DLH APGSQNG ++S RD GFQ+ +NV T+ V
Sbjct: 137 QGQVKYLDRALDWARKYNLKVWIDLHGAPGSQNGFDNSGLRDSLGFQQ--GNNVNFTLEV 194
Query: 157 IDFLAARYAN---RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213
++ + +Y + IEL+NEPL P + L+ LK +++ GY +R S VI+ +
Sbjct: 195 LEIIGKKYGGPEYEDVVIGIELLNEPLGPSLDLNYLKEFFQQGYQNLRNSGSVQAVIIQD 254
Query: 214 RLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN-----QRASDLG 268
P + + VV+D H+Y +FS ++ +I N ++
Sbjct: 255 AFQPMGYWDNFLTLDQYWNVVVDHHHYQVFSAGELQRSIDDHITVACNWGWDAKKEYHWN 314
Query: 269 AVTTSNGPLTFVGEW---------------------TCEWNVKDAS-----KQDYQRFAN 302
+ LT W +C+ V A+ + + +R+
Sbjct: 315 VAGEWSAALTDCARWLNGVGRGARFSGDFDNSPYFGSCDCYVNIATWPSEYRTNVRRYIE 374
Query: 303 AQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
AQLD + T GW +W KCE A W L+ +I G
Sbjct: 375 AQLDAF-EQTGGWFFWNWKCENAIEWDLQGLITAG 408
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Schwanniomyces occidentalis (taxid: 27300) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12725|EXG_YARLI Glucan 1,3-beta-glucosidase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EXG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 171/359 (47%), Gaps = 55/359 (15%)
Query: 25 PSVFKL---NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSN-GINAVR 80
PS+F+ N + EY T G ++A + L DHW+++IT+ D K ++ N +N VR
Sbjct: 54 PSLFEAFGNNDANVPVDEYHYTAWLGKEEAEKRLTDHWNTWITEYDIKAIAENYKLNLVR 113
Query: 81 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140
IP+G+W A P P+V G LD A W KYGVK VD+H PGSQNG ++S RD
Sbjct: 114 IPIGYW-AFSLLPNDPYVQGQEAYLDRALGWCRKYGVKAWVDVHGVPGSQNGFDNSGLRD 172
Query: 141 GFQEWGDSNVADTVAVIDFLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGY 197
+ NV ++ VI+++A +Y + IEL+NEPL P + ++ ++ Y++ G+
Sbjct: 173 HWDWPNADNVQHSINVINYIAGKYGAPEYNDIVVGIELVNEPLGPAIGMEVIEKYFQEGF 232
Query: 198 DAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 256
VR S V++ + ++ ++ G VV+D H Y +FS N+ Q+I
Sbjct: 233 WTVRHAGSDTAVVIHDAFQEKNYFNNFMTTEQGFWNVVLDHHQYQVFSPGELARNIDQHI 292
Query: 257 DYVNNQRASDLGAVTTSNGPLTFVGEW-------------------------------TC 285
V N +G ++ GEW +C
Sbjct: 293 AEVCN-----VGRQASTEYHWRIFGEWSAALTDCTHWLNGVGKGPRLDGSFPGSYYQRSC 347
Query: 286 E-------WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ W+ +D KQ+ +R+ AQLD + GW YW +K E A W + +++NG
Sbjct: 348 QGRGDIQTWSEQD--KQESRRYVEAQLDAWEHGGDGWIYWTYKTENALEWDFRRLVDNG 404
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|P29717|EXG_CANAL Glucan 1,3-beta-glucosidase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=XOG1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 161/340 (47%), Gaps = 50/340 (14%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 159 FLAARYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 216 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN------------- 261
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 327
Query: 262 ------------------------QRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDY 297
+ A D S PL + +W+ D K D
Sbjct: 328 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWS------DEHKTDT 381
Query: 298 QRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+R+ AQLD + T GW +W+ K E A WS + + NG
Sbjct: 382 RRYIEAQLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNG 420
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1D4Q5|EXGA_NEOFI Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 171/349 (48%), Gaps = 44/349 (12%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F N E+ +T G D+A VL HW ++IT DF ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQGDFHRIAQAGMNHVRIPIG 117
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W A P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWARDAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 145 WGDSN-VADTVAVIDFLAARYANRPSL-AAIELINEPLAPG-VALDTLKSYYKAGYDAVR 201
W N V+ TV LA RY + + AAIE +NEP PG V+ L+ YY D VR
Sbjct: 176 WQQGNTVSQTVDAFRALAERYLPQSDVVAAIEALNEPNIPGGVSEAGLRDYYDQIADVVR 235
Query: 202 KYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI----D 257
+ V +S+ G F +G VV+D H+Y +F N L++ ++ D
Sbjct: 236 QINPDTSVFLSD--GFLSTASWNGFKTG-EDVVMDTHHYEMFDNYLISLDIHGHVKSACD 292
Query: 258 YVNNQRASDL--------GAVTTS----NG---PLTFVGEWT-----------CEWNVKD 291
+ + SD GAVT NG P + GE+ + +V D
Sbjct: 293 FGKQIKGSDKPVVVGEWSGAVTDCTKYLNGKGVPTRYQGEYANNPKYGDCGDKTQGSVAD 352
Query: 292 ASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 353 LSDQERADTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 170/355 (47%), Gaps = 56/355 (15%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 145 W--GDSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDAV 200
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 201 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 260
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPDTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 261 NQRASDLGAVTTSNGPLTFVGEW-----------------------------------TC 285
+ A D G + VGEW T
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 286 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q4WK60|EXGA_ASPFU Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/355 (33%), Positives = 170/355 (47%), Gaps = 56/355 (15%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F N E+ +T G D+A VL HW ++IT +DF+ ++ G+N VRIP+G
Sbjct: 59 PSIFD-NAGDAAVDEWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W A P +P+V G + LDNA WA + G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 145 W--GDSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-GVALDTLKSYYKAGYDAV 200
W GD+ V+ TV LA RY + + AIE +NEP P GV+ L+ YY D V
Sbjct: 176 WQQGDT-VSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVV 234
Query: 201 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 260
R+ V +S+ G + F +G VV+D H+Y +F N L++ ++
Sbjct: 235 RQIDPGTSVFLSD--GFLSTESWNGFKTG-EDVVMDTHHYEMFDNYLISLDIDGHV---- 287
Query: 261 NQRASDLGAVTTSNGPLTFVGEW-----------------------------------TC 285
+ A D G + VGEW T
Sbjct: 288 -KSACDFGKQIEGSDKPVVVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTT 346
Query: 286 EWNVKDASKQ---DYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ +V D S Q D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 347 QGSVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 400
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q96V64|EXG_BLUGR Glucan 1,3-beta-glucosidase OS=Blumeria graminis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 163/348 (46%), Gaps = 61/348 (17%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G D+A L +HW ++IT+EDF ++S G+N VRIP+G+W A P P+V
Sbjct: 69 EYSYTAALGKDEAFTRLNNHWATWITEEDFAEIASMGLNHVRIPIGYW-ALVAIPNDPYV 127
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTVAV 156
G +D A DWA K G+KV++DLH APGSQNG ++S R G W GD NV +T+
Sbjct: 128 QGQLSYVDRAIDWARKNGLKVMLDLHGAPGSQNGFDNSG-RTGTIAWQSGD-NVPNTLRA 185
Query: 157 IDFLAARYANRPS-LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
I LA RYA + + AIEL+NEP G L +K +Y G+ VR TA I L
Sbjct: 186 IQALAERYAPQTDVVTAIELLNEPANWGNDLSQIKKFYYDGWGNVRTQGQTAVTIHDAFL 245
Query: 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL----NVQQNIDYVNNQRASDLGAVT 271
P ++ +G++ V++D H Y +FS N + +VQ ++ + +D
Sbjct: 246 DPRSWNGFMNSEAGVNNVILDTHIYQVFSQNEVAMKPCAHVQTACSSIDKIKPTD----- 300
Query: 272 TSNGPLTFVGEWT------CEW----------------------------------NVKD 291
T VGEWT +W ++
Sbjct: 301 ----KWTIVGEWTGAQTDCAKWLNGLGKGARYDGTLPGHSEGYYGSCDKKYEGTVDSMLP 356
Query: 292 ASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 338
K + Q F AQLD Y T GW +W K E A W + + G I
Sbjct: 357 VDKTNLQYFVEAQLDAYESHT-GWFFWTWKTESAPEWHFQNLTRAGLI 403
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Blumeria graminis (taxid: 34373) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1CRV0|EXGA_ASPCL Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 171/350 (48%), Gaps = 47/350 (13%)
Query: 25 PSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84
PS+F+ N E+ + G DKA +L HW S+IT +DF ++ G+N VRIPVG
Sbjct: 59 PSIFE-NGGGAAVDEWTLAEVLGKDKARAILSQHWSSFITQDDFNQIAQAGMNHVRIPVG 117
Query: 85 WWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+W + P +P+V G + LDNA WA G+KV++DLH APGSQNG ++S R G
Sbjct: 118 YWAVS--APDEPYVDGQLEFLDNAISWARAAGLKVMIDLHGAPGSQNGFDNSG-RKGPIA 174
Query: 145 W--GDSNVADTVAVIDFLAARYANRPSL-AAIELINEPLAPG-VALDTLKSYYKAGYDAV 200
W GD+ VA TV LA RY + AIE +NEP PG V LK YY + V
Sbjct: 175 WQQGDT-VARTVDAFKALAERYLPESDVVTAIEAVNEPNIPGGVNEGQLKEYYNQVLEVV 233
Query: 201 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI---- 256
A V +S+ G +A+G VV+D H+Y++F N L++ ++
Sbjct: 234 HSINPDAGVFLSD--GFLATASWNGYANG-ENVVMDTHHYHMFDNTLISLDINAHVRAAC 290
Query: 257 DYVNNQRASD--------LGAVTTS----NG---PLTFVGEWT-------C-------EW 287
++ N + SD GA+T NG P + G+W C
Sbjct: 291 EFGNQIKGSDKPVVVGEWTGALTDCTKHLNGKDIPTRYEGQWANSPRYGDCGNKRQGSSS 350
Query: 288 NVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENG 336
+ + + D +RF AQLD Y GW +W K E A W ++ ++ NG
Sbjct: 351 GLSEQERSDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAPGWDMQDLLANG 399
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| 359497371 | 529 | PREDICTED: probable glucan 1,3-beta-gluc | 0.997 | 0.642 | 0.768 | 1e-157 | |
| 296086866 | 537 | unnamed protein product [Vitis vinifera] | 0.994 | 0.631 | 0.767 | 1e-156 | |
| 224093776 | 455 | predicted protein [Populus trichocarpa] | 0.985 | 0.738 | 0.754 | 1e-151 | |
| 147795863 | 610 | hypothetical protein VITISV_000586 [Viti | 0.976 | 0.545 | 0.747 | 1e-150 | |
| 296086868 | 486 | unnamed protein product [Vitis vinifera] | 0.938 | 0.658 | 0.775 | 1e-148 | |
| 224081170 | 481 | predicted protein [Populus trichocarpa] | 0.985 | 0.698 | 0.715 | 1e-145 | |
| 356511109 | 503 | PREDICTED: probable glucan 1,3-beta-gluc | 0.985 | 0.667 | 0.695 | 1e-141 | |
| 356525499 | 502 | PREDICTED: probable glucan 1,3-beta-gluc | 0.985 | 0.669 | 0.692 | 1e-138 | |
| 357455945 | 491 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.985 | 0.684 | 0.685 | 1e-138 | |
| 357455947 | 497 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.985 | 0.676 | 0.695 | 1e-137 |
| >gi|359497371|ref|XP_003635494.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis vinifera] gi|296080899|emb|CBI18831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 262/341 (76%), Positives = 299/341 (87%), Gaps = 1/341 (0%)
Query: 1 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWD 60
+F+QA +TADYG S WDD++PSVF + IV TL+GEYQITNG+GPD+APQV+QDHW+
Sbjct: 167 LFLQA-KPGLVTADYGGSGWDDNNPSVFHMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI 120
+YIT+EDF+FLSSNG+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 121 VDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180
VDLHA GSQNGN+HS TRDGFQEWGDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPL
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPL 345
Query: 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 240
APGV L+ LK YYKAGYDAVRKYTS AYVI+SNRLGPAD KELL FA L+RVVIDVHYY
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARSLNRVVIDVHYY 405
Query: 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 300
+LFS+ FN +NVQQNID++ NQRASDL AVTTSNGPL+FVGEWT EW A K+DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYNQRASDLSAVTTSNGPLSFVGEWTAEWAKSGAPKEDYQRF 465
Query: 301 ANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKLV 341
A AQ+DVYGRATFGWAYWA++C NHWSL+WMIENGYI L+
Sbjct: 466 AKAQIDVYGRATFGWAYWAYRCAQNHWSLEWMIENGYINLL 506
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086866|emb|CBI33033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 261/340 (76%), Positives = 300/340 (88%), Gaps = 1/340 (0%)
Query: 1 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWD 60
+F+QA +TADYG S WDD++PSVF++ IV TL+GEYQITNG+GPD+APQV+QDHW+
Sbjct: 167 LFLQA-KPGLVTADYGGSGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI 120
+YIT+EDF+FLSSNG+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 121 VDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180
VDLHA GSQNGN+HS TRDGFQEWGDSN+ DTVAVIDFLAARYAN PSLA+IEL+NEPL
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLASIELMNEPL 345
Query: 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 240
APGV L+ LK YYKAGYDAVRKYTS AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 405
Query: 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 300
+LFS+ FN +NVQQNID++ +QRASDL AVTTSNGPL+FVGEWT EW ASK+DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYSQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRF 465
Query: 301 ANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
A AQ+DVY RATFGWAYWA++C NHWSLKWMIENG+I L
Sbjct: 466 AKAQIDVYRRATFGWAYWAYRCAQNHWSLKWMIENGHINL 505
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093776|ref|XP_002309987.1| predicted protein [Populus trichocarpa] gi|222852890|gb|EEE90437.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/342 (75%), Positives = 297/342 (86%), Gaps = 6/342 (1%)
Query: 2 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHW 59
FIQA SET +TADY S W+DSDPSVFK+ IV+ + RGEYQ+TNG+GPD+APQVLQDHW
Sbjct: 117 FIQASSETLVTADYVGSGWEDSDPSVFKMTIVNIYSFRGEYQLTNGYGPDRAPQVLQDHW 176
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 119
+SYIT+EDF+F+S N +NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+KYG+KV
Sbjct: 177 NSYITEEDFRFMSENSLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQKYGMKV 236
Query: 120 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLA-ARYANRPSLAAIELINE 178
IVDLHA SQNGN+HSATRDG+QEWG+SN+ +TVAVIDFLA +RYA++PSLAAIEL+NE
Sbjct: 237 IVDLHAVQASQNGNDHSATRDGYQEWGESNIQETVAVIDFLAESRYADKPSLAAIELMNE 296
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 238
P+APGV LDTL YY+AGYDAVRK++ AYVI+SNRLGPAD KELLSFASGL RVVIDVH
Sbjct: 297 PMAPGVNLDTLIKYYQAGYDAVRKHSENAYVILSNRLGPADSKELLSFASGLKRVVIDVH 356
Query: 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 298
YYNLFS++FN +N QQNIDY+ NQRAS L VTT+NGPL EWT +W V+ AS QDYQ
Sbjct: 357 YYNLFSDSFNNMNPQQNIDYIYNQRASALTTVTTTNGPLR---EWTGDWAVQGASMQDYQ 413
Query: 299 RFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
FA AQLDVYGRATFGWAYWA+KC +HWSLKWMIEN YIKL
Sbjct: 414 NFAKAQLDVYGRATFGWAYWAYKCAGDHWSLKWMIENNYIKL 455
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147795863|emb|CAN74231.1| hypothetical protein VITISV_000586 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 254/340 (74%), Positives = 292/340 (85%), Gaps = 7/340 (2%)
Query: 1 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWD 60
+F+QA +TADYG S WD ++PSVF++ IV TL+GEYQITNG+GPD+APQV+QDHW+
Sbjct: 275 LFLQA-KPGLVTADYGGSGWDXNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 333
Query: 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI 120
+YI +EDF+FLSSNG+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+I
Sbjct: 334 AYIXNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 393
Query: 121 VDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180
VDLHA GSQNGN+HS TRDGFQEWGDSN+ DTVAVIDFLAA SLA IEL+NEPL
Sbjct: 394 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAA------SLAXIELMNEPL 447
Query: 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 240
APGV L+ LK YYKAGYDAVRKYTS AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY
Sbjct: 448 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 507
Query: 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 300
+LFS+ FN +NVQQNID++ +QRASDL AVTTSNGPL+FVGEWT EW ASK+DYQRF
Sbjct: 508 SLFSDMFNNMNVQQNIDFIYSQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRF 567
Query: 301 ANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
A AQ+DVY RATFGWAYWA++C NHWSLKWMIENG+I L
Sbjct: 568 AKAQIDVYRRATFGWAYWAYRCAQNHWSLKWMIENGHINL 607
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086868|emb|CBI33035.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/321 (77%), Positives = 285/321 (88%), Gaps = 1/321 (0%)
Query: 1 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWD 60
+F+QA +TADYG S WDD++PSVF++ IV TL+GEYQITNG+GPD+APQV+QDHW+
Sbjct: 167 LFLQA-KPGLVTADYGGSGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI 120
+YIT+EDF+FLSSNG+NAVRIPVGWWIA+DPTPPKPFVGGS K LDNAF WA+ G+K+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 121 VDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180
VDLHA GSQNGN+HS TRDGFQEWGDSN+ DTVAVIDFLAARYAN PSLAAIEL+NEPL
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPL 345
Query: 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 240
APGV L+ LK YYKAGYDAVRKYTS AYVI+SNRLGPAD KELL FA GL+RVVIDVHYY
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 405
Query: 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 300
+LFS+ FN +NVQQNID++ NQRASDL AVTTSNGPL+FVGEWT EW ASK+DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYNQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKEDYQRF 465
Query: 301 ANAQLDVYGRATFGWAYWAHK 321
A AQ+DVYGRATFGWAYWA++
Sbjct: 466 AKAQIDVYGRATFGWAYWAYR 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081170|ref|XP_002306319.1| predicted protein [Populus trichocarpa] gi|222855768|gb|EEE93315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/352 (71%), Positives = 290/352 (82%), Gaps = 16/352 (4%)
Query: 2 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHW 59
F+QAISET +TADY S WDD DPSVFK+ IV+ +RGEYQ+TNG+G D+APQVLQDHW
Sbjct: 131 FLQAISETLVTADYVGSGWDDGDPSVFKMTIVNPNAIRGEYQLTNGYGTDRAPQVLQDHW 190
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAE------ 113
+SYITDEDF+F+S+NG+NAVRIPVGWWIA DP PPKPFV GS K LDNAF WA+
Sbjct: 191 NSYITDEDFRFMSANGLNAVRIPVGWWIACDP-PPKPFVSGSLKALDNAFTWAQCYKYSD 249
Query: 114 -------KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYAN 166
+YG+KVIVDLHA GSQNGN HS TRDG+QEWGDSN+ DTVAVIDFLA RYAN
Sbjct: 250 DGLRIYMEYGMKVIVDLHAIQGSQNGNGHSGTRDGYQEWGDSNIQDTVAVIDFLAERYAN 309
Query: 167 RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSF 226
SLAAIEL+NEP+APG++LDTLK YY+AGYDAVRKYT AYVI+SNRLG AD KELLSF
Sbjct: 310 NTSLAAIELMNEPMAPGISLDTLKKYYQAGYDAVRKYTQNAYVILSNRLGNADAKELLSF 369
Query: 227 ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286
AS L V IDVHYYNLFS++F+ +N QQNID+++NQR+SDL VTT+NGP FVGEWT E
Sbjct: 370 ASSLHCVAIDVHYYNLFSDSFSNMNAQQNIDFIHNQRSSDLDTVTTANGPSIFVGEWTGE 429
Query: 287 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYI 338
W V AS +DYQ FA AQ++VYGRA FGWAYWA+KC AN+WSLKWMIEN YI
Sbjct: 430 WEVNGASMEDYQNFAKAQIEVYGRAQFGWAYWAYKCAANYWSLKWMIENNYI 481
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356511109|ref|XP_003524272.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/341 (69%), Positives = 287/341 (84%), Gaps = 5/341 (1%)
Query: 2 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHW 59
F+QAISET + A+Y SSWDDSDPS+FK+N++S +RGEYQITNG+ PDKA ++++DHW
Sbjct: 166 FLQAISETVVLANYEGSSWDDSDPSIFKMNVLSGSIIRGEYQITNGYSPDKATKIMRDHW 225
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 119
++YI ++DFKF+S NG+NAVRIPVGWW DPTPPKPFVGGS +VLDNAF WAEKYG+KV
Sbjct: 226 NTYIIEDDFKFMSENGLNAVRIPVGWWTTQDPTPPKPFVGGSLEVLDNAFTWAEKYGIKV 285
Query: 120 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 179
IVDLHAAPGSQNG HSA+RDG+ EWGDS ++DTVA IDFLA RY+NR L AIEL+NEP
Sbjct: 286 IVDLHAAPGSQNGRPHSASRDGYLEWGDSYISDTVATIDFLAERYSNRSGLVAIELMNEP 345
Query: 180 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHY 239
GV L++LKSYY+AGYDAVRK+TS+AYVIMSN L D K LLSFA SRVVIDVHY
Sbjct: 346 --QGVNLESLKSYYQAGYDAVRKHTSSAYVIMSNPLD-RDSKVLLSFAGAFSRVVIDVHY 402
Query: 240 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQR 299
YNLFS+ F+ +NVQQNID++ NQRASDL ++TTSNGPL FVGEW+ +W V+ ASK+D+Q+
Sbjct: 403 YNLFSDRFSNMNVQQNIDFIKNQRASDLSSLTTSNGPLIFVGEWSSDWKVQSASKKDHQK 462
Query: 300 FANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
F Q+DVY RA FGWAYWA+ C++N WS+KWMIEN YIKL
Sbjct: 463 FTQVQVDVYSRAKFGWAYWAYICDSNFWSIKWMIENNYIKL 503
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525499|ref|XP_003531362.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/341 (69%), Positives = 282/341 (82%), Gaps = 5/341 (1%)
Query: 2 FIQAISETRLTADYGSSSWDDSDPSVFKLNIVS--TLRGEYQITNGFGPDKAPQVLQDHW 59
F+QAISE + A+Y SSWDDSDPSVFK+N++S +RGEYQITNG+GPDKA ++++DHW
Sbjct: 165 FLQAISENVVLANYEGSSWDDSDPSVFKMNVLSGSIIRGEYQITNGYGPDKASKIMRDHW 224
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 119
++YIT++DFKF+S NG+NAVRIPVGWW DPTPPKPFVGGS +VLDNAF WAEKYG+KV
Sbjct: 225 NTYITEDDFKFMSENGLNAVRIPVGWWTTLDPTPPKPFVGGSLEVLDNAFTWAEKYGIKV 284
Query: 120 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 179
IVDLHAAPGSQNG HSA+RDG+ EW DS ++DTVA IDFLA RYAN L AIEL+NEP
Sbjct: 285 IVDLHAAPGSQNGRPHSASRDGYLEWDDSYISDTVAAIDFLAERYANSSGLVAIELMNEP 344
Query: 180 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHY 239
GV L++LKSYY+AGYDAVRK+TS+AYVIMSN L D K LLSFA S VVIDVHY
Sbjct: 345 --QGVNLESLKSYYQAGYDAVRKHTSSAYVIMSNPLD-RDSKVLLSFAGAFSGVVIDVHY 401
Query: 240 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQR 299
YNLFS+ F+ +NVQQNID++ QR SDL ++TTSNGPL FVGEW+ +W V+ ASK D Q+
Sbjct: 402 YNLFSDRFSNMNVQQNIDFIKKQRVSDLSSLTTSNGPLIFVGEWSSDWKVQSASKIDQQK 461
Query: 300 FANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
F Q+DVY RA FGWAYWA+KC++N WS+KWMIEN YIKL
Sbjct: 462 FTQVQVDVYSRAKFGWAYWAYKCDSNFWSIKWMIENNYIKL 502
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455945|ref|XP_003598253.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487301|gb|AES68504.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/340 (68%), Positives = 281/340 (82%), Gaps = 4/340 (1%)
Query: 1 MFIQAISETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWD 60
+F+QA SET +TA+Y ++W++SDPSVFK+ IV TL GEYQ+TNG+GPD+APQVL++HW+
Sbjct: 138 LFLQAQSETLVTANYQGTNWEESDPSVFKMTIVRTLEGEYQLTNGYGPDRAPQVLREHWN 197
Query: 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI 120
SYIT++DF+F+S NG++AVRIPVGWWIA DP PPKPFVGGS LDNAF WA+ + +KVI
Sbjct: 198 SYITEDDFRFMSQNGLDAVRIPVGWWIAYDPNPPKPFVGGSLAALDNAFTWAQNHEMKVI 257
Query: 121 VDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180
VDLHA GSQNGNEHS TRDG+ EWGDS + TVAVIDFLA RY N+PSL IEL+NEP
Sbjct: 258 VDLHAVEGSQNGNEHSGTRDGYTEWGDSYIPQTVAVIDFLAQRYGNKPSLGGIELMNEP- 316
Query: 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYY 240
GV LD+LK YYKA YDAVRKY AYVIMSN L D K LLSF SG ++VV+DVHYY
Sbjct: 317 -QGVNLDSLKKYYKAAYDAVRKYNPEAYVIMSNPL-DGDSKALLSFVSGFNKVVLDVHYY 374
Query: 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRF 300
N+F FNG+NVQQNID++ N+RASDL V+++N LTF+GEWT EW +++ASKQD+Q F
Sbjct: 375 NMFWEKFNGMNVQQNIDFIRNERASDLAGVSSTNA-LTFIGEWTGEWTIQNASKQDFQNF 433
Query: 301 ANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
A AQLDVY RATFGWAYW++KC+ N WSLKWMIENGYIKL
Sbjct: 434 AQAQLDVYSRATFGWAYWSYKCQFNRWSLKWMIENGYIKL 473
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455947|ref|XP_003598254.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487302|gb|AES68505.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 237/341 (69%), Positives = 280/341 (82%), Gaps = 5/341 (1%)
Query: 1 MFIQAISETRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHW 59
++ Q SET +TADYG +SW++SDPSVF++ IV TL GEYQ+TNG+GPDKAPQVL+DHW
Sbjct: 161 LYWQVRSETLVTADYGQGTSWEESDPSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHW 220
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 119
+SYIT++DF F+S NG+NAVRIPVGWWIA DP PPKPFVGGS LDNAF WA+ +G+KV
Sbjct: 221 NSYITEDDFTFMSQNGLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKV 280
Query: 120 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 179
IVDLHA GSQNGN+HS TRDGF EWG+S + TV+VIDFLA RY NRPSL IEL+NEP
Sbjct: 281 IVDLHAVEGSQNGNDHSGTRDGFIEWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEP 340
Query: 180 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHY 239
GV LD+LK YYK YDAVRKY AYVIMSN L AD K LLSF +G ++VV+DVHY
Sbjct: 341 --QGVNLDSLKKYYKEAYDAVRKYNPNAYVIMSNPLD-ADSKVLLSFVTGFNKVVLDVHY 397
Query: 240 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQR 299
YNL+S+ F +NVQQNIDY+NN+RASDL V+++N L+FVGEWT E+ V+ AS QDYQR
Sbjct: 398 YNLYSDKFTNMNVQQNIDYINNERASDLSGVSSTNA-LSFVGEWTDEFLVQGASMQDYQR 456
Query: 300 FANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGYIKL 340
+ AQLDVY RATFGWAYWA+KC+ NHWSLKWMIENGYIKL
Sbjct: 457 YGQAQLDVYSRATFGWAYWAYKCQYNHWSLKWMIENGYIKL 497
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| ASPGD|ASPL0000016384 | 405 | exgC [Emericella nidulans (tax | 0.686 | 0.577 | 0.376 | 2e-43 | |
| CGD|CAL0006153 | 438 | XOG1 [Candida albicans (taxid: | 0.651 | 0.506 | 0.361 | 2.5e-43 | |
| UNIPROTKB|P29717 | 438 | XOG1 "Glucan 1,3-beta-glucosid | 0.651 | 0.506 | 0.361 | 2.5e-43 | |
| SGD|S000005716 | 445 | SPR1 "Sporulation-specific exo | 0.601 | 0.460 | 0.352 | 5.7e-38 | |
| CGD|CAL0006050 | 479 | EXG2 [Candida albicans (taxid: | 0.472 | 0.336 | 0.339 | 3.2e-36 | |
| UNIPROTKB|Q5AIA1 | 479 | EXG2 "Putative uncharacterized | 0.472 | 0.336 | 0.339 | 3.2e-36 | |
| POMBASE|SPBC1105.05 | 407 | exg1 "glucan 1,6-beta-glucosid | 0.700 | 0.587 | 0.312 | 4.4e-34 | |
| SGD|S000004291 | 448 | EXG1 "Major exo-1,3-beta-gluca | 0.700 | 0.533 | 0.333 | 1.1e-30 | |
| CGD|CAL0006247 | 525 | SPR1 [Candida albicans (taxid: | 0.689 | 0.447 | 0.276 | 1.5e-28 | |
| UNIPROTKB|Q59Z61 | 525 | SPR1 "Putative uncharacterized | 0.689 | 0.447 | 0.276 | 1.5e-28 |
| ASPGD|ASPL0000016384 exgC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 402 (146.6 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 95/252 (37%), Positives = 146/252 (57%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY +T G ++A L +HW+++IT+EDF ++ G+N VRIP+G+W A P +P+V
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAA-PLDGEPYV 117
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD--GFQEWGDSNVADTVAV 156
G + LDNA WA + +KVIVDLH APGSQNG ++S R G+Q+ GD+ V T+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRRGPIGWQQ-GDT-VEQTILA 175
Query: 157 IDFLAARY-ANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214
+ LA RY A+ ++ IE +NEP PG + D LK YY+ VRK + A +++ +
Sbjct: 176 FETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHD- 234
Query: 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA--VTT 272
G + F +G V++D H+Y +F N +++++ID A LG +
Sbjct: 235 -GFVQTEGWNGFMTG-ENVMMDTHHYEVFEGGQNAWSIEKHID-----AACQLGRQHLQA 287
Query: 273 SNGPLTFVGEWT 284
++ P+ VGEWT
Sbjct: 288 ADKPV-IVGEWT 298
|
|
| CGD|CAL0006153 XOG1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 82/227 (36%), Positives = 127/227 (55%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 159 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 216 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 261
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACN 314
|
|
| UNIPROTKB|P29717 XOG1 "Glucan 1,3-beta-glucosidase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 379 (138.5 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 82/227 (36%), Positives = 127/227 (55%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 159 FLAARYA-NRPS--LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
+ +Y N S + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 216 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 261
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACN 314
|
|
| SGD|S000005716 SPR1 "Sporulation-specific exo-1,3-beta-glucanase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 75/213 (35%), Positives = 119/213 (55%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY G +KA + L HW ++ +EDF ++S G N VRIP+G+W A P+V
Sbjct: 91 EYHFCEKLGYEKAKERLYSHWSTFYKEEDFAKIASQGFNLVRIPIGYW-AFTTLSHDPYV 149
Query: 99 GGSSKV-LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 157
+ LD A DWA KYG+KV +DLH A GSQNG ++S RD ++ D N++ T+ +
Sbjct: 150 TAEQEYFLDRAIDWARKYGLKVWIDLHGAAGSQNGFDNSGLRDSYKFLEDENLSATMKAL 209
Query: 158 DFLAARYANR---PSLAAIELINEPLAPGVALDTLKSYY-KAGYDAVR-KYTSTAYVIMS 212
++ ++Y+ ++ IEL+NEPL P + ++ LK+ K YD +R K S +++
Sbjct: 210 TYILSKYSTDVYLDTVIGIELLNEPLGPVIDMERLKNLLLKPAYDYLRNKINSNQIIVIH 269
Query: 213 NRLGPADHKE-LLSFASGLSRVVIDVHYYNLFS 244
+ P + + L+ V+ID H+Y +FS
Sbjct: 270 DAFQPYHYWDGFLNDEKNEYGVIIDHHHYQVFS 302
|
|
| CGD|CAL0006050 EXG2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 155
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 156 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 202
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| UNIPROTKB|Q5AIA1 EXG2 "Putative uncharacterized protein EXG2" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 267 (99.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 59/174 (33%), Positives = 95/174 (54%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY G +A + L DHW+S + DFK + G+N VRIP+G+W + + P+V
Sbjct: 79 EYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNMVRIPIGYW-SFEKLEGDPYV 137
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD-GFQEWGDSN--VADTVA 155
G+ LD A +W+ +KV++DLH AP +QNG ++S R+ G+ W + V T
Sbjct: 138 SGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGLRNLGYPGWQNKTEYVNHTYK 197
Query: 156 VIDFL-----AARYAN--RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 202
V+ + +YA+ + ++ IE++NEPL P +D LK +Y Y+ R+
Sbjct: 198 VLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPN--MDKLKEFYIESYNDGRE 249
|
|
| POMBASE|SPBC1105.05 exg1 "glucan 1,6-beta-glucosidase Exg1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 321 (118.1 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 78/250 (31%), Positives = 126/250 (50%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
E+ G D+A L H+ S+ T+ DF ++S G+N +RIP+G+W N +P+V
Sbjct: 72 EWGFCEVLGADEAASQLAAHYSSFYTESDFATIASWGVNVLRIPIGYWAFN-VVDGEPYV 130
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN-VADTVAVI 157
G LD A WAE+YG+KV +DLH PGSQNG E+S + G W ++ V T+ +I
Sbjct: 131 QGQEYWLDQALTWAEQYGLKVWIDLHGVPGSQNGFENSG-KTGSIGWQQNDTVTRTLDII 189
Query: 158 DFLAARYANRPSLAA---IELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214
++A +Y + IE +NEPL G+ +D LK Y Y+ V +S+ I+ +
Sbjct: 190 TYVANKYTQSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSSVATIIHDA 249
Query: 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274
+ + +V+DVH Y L+ ++ + ++ V +G S+
Sbjct: 250 YVDLSIWDYGVVSPSSYNLVMDVHRYQLYESDECSKTLDDHLSDV-----CSIGDSIASS 304
Query: 275 GPLTFVGEWT 284
+T GEW+
Sbjct: 305 PYITVTGEWS 314
|
|
| SGD|S000004291 EXG1 "Major exo-1,3-beta-glucanase of the cell wall" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 84/252 (33%), Positives = 133/252 (52%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W A P+V
Sbjct: 90 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYW-AFQTLDDDPYV 148
Query: 99 GG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 157
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T V+
Sbjct: 149 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTTNVL 208
Query: 158 DFLAARYANRPSL---AAIELINEPLAPGVALDTLKSYYKA-GYDAVRK-YTSTAYVIMS 212
+++ +Y+ L IELINEPL P + +D +K+ Y A Y+ +R S +I+
Sbjct: 209 NYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 268
Query: 213 NRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 271
+ P ++ + ++ G V ID H+Y +F+++ ++++ID + + A + G
Sbjct: 269 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASD----QLERSIDE-HIKVACEWGTGV 323
Query: 272 TSNGPLTFVGEW 283
+ T GE+
Sbjct: 324 LNESHWTVCGEF 335
|
|
| CGD|CAL0006247 SPR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 69/250 (27%), Positives = 128/250 (51%)
Query: 39 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 96
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 97 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 154
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 155 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274
+ S+ + ++D H Y +FS LN+QQ++ + +Q G +
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQ-----GESIVKS 331
Query: 275 GPLTFVGEWT 284
G + VGE++
Sbjct: 332 GHRSIVGEFS 341
|
|
| UNIPROTKB|Q59Z61 SPR1 "Putative uncharacterized protein SPR1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 293 (108.2 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 69/250 (27%), Positives = 128/250 (51%)
Query: 39 EYQITNGFGP--DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP 96
EY +T+ D LQ+HWD + + DF+ +S +N +RIP+G+W A + P P
Sbjct: 103 EYTLTSLLRDTMDNGSIYLQNHWDQFYNETDFQQISQLKLNLIRIPIGYW-AFELLPNDP 161
Query: 97 FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW--GDSNVADTV 154
++ G K LD A +WA KY + + + +H PGSQNG ++S W + N+ T
Sbjct: 162 YIQGQEKYLDIAIEWATKYNLFIQIGIHGLPGSQNGFDNSGLYTETPTWLENELNMNLTY 221
Query: 155 AVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214
++D++ +Y N ++ +I+L+NEPL + + L ++Y + + + A +++ +
Sbjct: 222 RLVDYILNKYGNHTTIHSIQLVNEPLGFLLNKEKLSNFYIYCLEKIIQKNIKAKLVLHDA 281
Query: 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274
+ S+ + ++D H Y +FS LN+QQ++ + +Q G +
Sbjct: 282 FFNIE-----SWKNFPGEFILDHHLYEVFSQWQIDLNLQQHLQSIKHQ-----GESIVKS 331
Query: 275 GPLTFVGEWT 284
G + VGE++
Sbjct: 332 GHRSIVGEFS 341
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 7e-32 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 6e-17 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 7e-32
Identities = 86/354 (24%), Positives = 136/354 (38%), Gaps = 42/354 (11%)
Query: 21 DDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 80
D L G G A +L+ HW ++IT+EDF + S G NAVR
Sbjct: 32 ADGLFKTDPKESPGQLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVR 91
Query: 81 IPVGWWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138
IP+G+W P++ K+LD A +WA+K G+ V++DLH PG NG+EHS
Sbjct: 92 IPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGY 151
Query: 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYD 198
+ + + NV T+ + F+A R+ N ++ ELINEP + +T YD
Sbjct: 152 TSDY-KEENENVEATIDIWKFIANRFKNYDTVIGFELINEPNGIVTS-ETWNGGDDEAYD 209
Query: 199 AVRKYTSTAYVIMSNRLGPAD--HKELLSFAS-GLSRVVIDVHYYNLFSNNFNGLNVQQN 255
VR + R+G ++ + G S D Y + ++
Sbjct: 210 VVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTAN--K 267
Query: 256 IDYVNNQRASD--------------------------LGAVTTSNGPLTFVGEWTCEWNV 289
Y + D +G NG T +GE+ +N
Sbjct: 268 HLYAPHVYGDDVLNGGSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNA 327
Query: 290 -----KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEAN-HWSLKWMIENGY 337
+D K + + + QLDV+ T W + + ++ I G
Sbjct: 328 NNPNPQDERKDNVKVYLENQLDVFDT-TTYWINNPWSGGNDTGYDIEDDINLGL 380
|
Length = 407 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 6e-17
Identities = 62/270 (22%), Positives = 94/270 (34%), Gaps = 29/270 (10%)
Query: 58 HW--DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 115
HW Y T + G N VR+PV W P +D D+A
Sbjct: 16 HWGNPYYTTKAMIDLVKDWGFNVVRLPVSWGGYVPNNPDYLIDENWLNRVDEVVDYAIDN 75
Query: 116 GVKVIVDLHAAPGSQNGNEHSAT-RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 174
G+ VI+D H + N + T + F++ +A RY N P++ E
Sbjct: 76 GMYVIIDWHHDTWPGDPNGNIDTAKAFFKKLW-----------TQIATRYGNNPNV-IFE 123
Query: 175 LINEPLAPGVAL--DTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLS 231
L+NEP A D +K Y + DA+R +I+ L+ +
Sbjct: 124 LMNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVGGPSWSQNPDGAALNDPNDDD 183
Query: 232 RVVIDVHYYN--LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289
++ VH+Y FS + G + N+ QR NG F+G E+
Sbjct: 184 NLIYSVHFYAPSHFSGTWFGCEDKTNLA----QRLRAAANYALDNGIPVFIG----EFGG 235
Query: 290 KDASKQDYQRFANAQLDVYGRATFGWAYWA 319
+A A LD W W+
Sbjct: 236 GNADGPCRDE-AEKWLDYLKENGISWTGWS 264
|
Length = 269 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.96 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.85 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 99.78 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 99.77 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.74 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 99.71 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 99.7 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 99.69 | |
| PLN02849 | 503 | beta-glucosidase | 99.69 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 99.68 | |
| PLN02814 | 504 | beta-glucosidase | 99.68 | |
| PLN02998 | 497 | beta-glucosidase | 99.67 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 99.67 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.67 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 99.66 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.59 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 99.59 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 99.52 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.51 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.34 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 99.21 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 99.11 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 98.92 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.92 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.92 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 98.91 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 98.88 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.73 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.52 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.41 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 98.4 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 98.13 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 98.09 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 98.08 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.03 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 97.96 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 97.68 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 97.54 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 97.3 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 97.15 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 97.1 | |
| PLN02161 | 531 | beta-amylase | 97.06 | |
| PLN02803 | 548 | beta-amylase | 96.91 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 96.9 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.88 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 96.81 | |
| PLN00197 | 573 | beta-amylase; Provisional | 96.75 | |
| PLN02905 | 702 | beta-amylase | 96.67 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 96.66 | |
| PLN02801 | 517 | beta-amylase | 96.61 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 96.59 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 96.56 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 96.56 | |
| PLN02705 | 681 | beta-amylase | 96.54 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 96.52 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 96.51 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 96.49 | |
| PLN02960 | 897 | alpha-amylase | 96.49 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 96.46 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 96.33 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 96.3 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 96.23 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 96.18 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 96.08 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 96.05 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 96.02 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 95.95 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 95.92 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 95.9 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 95.88 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 95.85 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 95.5 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 95.39 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 95.39 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 94.98 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 94.44 | |
| PLN02361 | 401 | alpha-amylase | 94.23 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 94.21 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 94.18 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 94.08 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 93.63 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 93.58 | |
| PRK05628 | 375 | coproporphyrinogen III oxidase; Validated | 93.5 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 93.33 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 93.11 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 93.1 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 93.09 | |
| PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 92.86 | |
| PRK08208 | 430 | coproporphyrinogen III oxidase; Validated | 92.73 | |
| PRK05904 | 353 | coproporphyrinogen III oxidase; Provisional | 92.59 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 92.58 | |
| PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 92.46 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 92.34 | |
| COG3664 | 428 | XynB Beta-xylosidase [Carbohydrate transport and m | 92.22 | |
| PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 91.92 | |
| PRK09058 | 449 | coproporphyrinogen III oxidase; Provisional | 91.87 | |
| cd06568 | 329 | GH20_SpHex_like A subgroup of the Glycosyl hydrola | 91.77 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 91.73 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 91.67 | |
| PRK05660 | 378 | HemN family oxidoreductase; Provisional | 91.56 | |
| TIGR00539 | 360 | hemN_rel putative oxygen-independent coproporphyri | 91.53 | |
| PRK06582 | 390 | coproporphyrinogen III oxidase; Provisional | 91.36 | |
| PLN02784 | 894 | alpha-amylase | 91.33 | |
| PRK09057 | 380 | coproporphyrinogen III oxidase; Provisional | 91.27 | |
| PRK09249 | 453 | coproporphyrinogen III oxidase; Provisional | 90.9 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 90.8 | |
| PF12891 | 239 | Glyco_hydro_44: Glycoside hydrolase family 44; Int | 90.75 | |
| KOG2566 | 518 | consensus Beta-glucocerebrosidase [Carbohydrate tr | 90.69 | |
| TIGR01212 | 302 | radical SAM protein, TIGR01212 family. This unchar | 89.56 | |
| PRK08446 | 350 | coproporphyrinogen III oxidase; Provisional | 89.52 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 89.37 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 89.15 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 89.12 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 89.04 | |
| PRK08207 | 488 | coproporphyrinogen III oxidase; Provisional | 88.89 | |
| cd06562 | 348 | GH20_HexA_HexB-like Beta-N-acetylhexosaminidases c | 87.63 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 87.32 | |
| cd06563 | 357 | GH20_chitobiase-like The chitobiase of Serratia ma | 87.07 | |
| smart00812 | 384 | Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydro | 86.66 | |
| TIGR02455 | 688 | TreS_stutzeri trehalose synthase, Pseudomonas stut | 85.54 | |
| PRK08898 | 394 | coproporphyrinogen III oxidase; Provisional | 85.04 | |
| cd06570 | 311 | GH20_chitobiase-like_1 A functionally uncharacteri | 84.97 | |
| TIGR00538 | 455 | hemN oxygen-independent coproporphyrinogen III oxi | 84.48 | |
| PRK09856 | 275 | fructoselysine 3-epimerase; Provisional | 84.36 | |
| TIGR00542 | 279 | hxl6Piso_put hexulose-6-phosphate isomerase, putat | 84.29 | |
| PRK13210 | 284 | putative L-xylulose 5-phosphate 3-epimerase; Revie | 83.22 | |
| PRK14507 | 1693 | putative bifunctional 4-alpha-glucanotransferase/m | 82.94 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 82.32 | |
| PF05913 | 357 | DUF871: Bacterial protein of unknown function (DUF | 82.15 | |
| PRK14565 | 237 | triosephosphate isomerase; Provisional | 82.05 | |
| cd07948 | 262 | DRE_TIM_HCS Saccharomyces cerevisiae homocitrate s | 81.52 | |
| cd02871 | 312 | GH18_chitinase_D-like GH18 domain of Chitinase D ( | 81.47 | |
| PRK13209 | 283 | L-xylulose 5-phosphate 3-epimerase; Reviewed | 80.13 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=277.12 Aligned_cols=248 Identities=29% Similarity=0.425 Sum_probs=176.8
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCc
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
+++++|+.|+++|+|+|||||.|..+.++.++..+++..+++||++|++|.++||+||||+|..|+..+...
T Consensus 22 ~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w~~~~~-------- 93 (281)
T PF00150_consen 22 ITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPGWANGGD-------- 93 (281)
T ss_dssp SHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTTCSSSTS--------
T ss_pred CHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCcccccccc--------
Confidence 779999999999999999999986666565555577889999999999999999999999999865422111
Q ss_pred cCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC-------hHHHHHHHHHHHHHHHhcCCCceEEEeCC
Q 019395 143 QEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-------LDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214 (341)
Q Consensus 143 ~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~v~~~~~ 214 (341)
.... ....+.+.++|+.|++||++++.+++|||+|||...... ...+.+++++++++||+++|+++|++++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~ 173 (281)
T PF00150_consen 94 GYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGG 173 (281)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEH
T ss_pred ccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCC
Confidence 1111 356677888999999999999999999999999974322 26789999999999999999999999853
Q ss_pred -CCCCChhh-hhhccC-CCCcEEEEeeecCCCCccccCc-cchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC
Q 019395 215 -LGPADHKE-LLSFAS-GLSRVVIDVHYYNLFSNNFNGL-NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK 290 (341)
Q Consensus 215 -~~~~~~~~-~~~~~~-~~~~~v~~~H~Y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~ 290 (341)
|+ ..... ....+. ...++++++|.|.++....... ........+......... ..+..+.||+|||||.....
T Consensus 174 ~~~-~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~pv~~gE~G~~~~~- 250 (281)
T PF00150_consen 174 GWG-ADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALN-WAKKNGKPVVVGEFGWSNND- 250 (281)
T ss_dssp HHH-TBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHH-HHHHTTSEEEEEEEESSTTT-
T ss_pred ccc-cccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHH-HHHHcCCeEEEeCcCCcCCC-
Confidence 33 23322 333332 4689999999999865321111 111111222222222222 33445778999999986421
Q ss_pred CCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 291 DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
.. ...++....++.+++.++||++|+||.++
T Consensus 251 -~~--~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 281 (281)
T PF00150_consen 251 -GN--GSTDYADAWLDYLEQNGIGWIYWSWKPNS 281 (281)
T ss_dssp -SC--HHHHHHHHHHHHHHHTTCEEEECEESSSS
T ss_pred -CC--cCHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 11 33344444577778889999999999764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=235.22 Aligned_cols=301 Identities=29% Similarity=0.453 Sum_probs=202.0
Q ss_pred CcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCC-CCCcc--cchHHHHHHHHHH
Q 019395 35 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-PKPFV--GGSSKVLDNAFDW 111 (341)
Q Consensus 35 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~-~~~~~--~~~l~~ld~~i~~ 111 (341)
....+...+..+|...+...++.||.++++++++..|+++|||+||||++||.+ .+.. ..|+. ...+.+|+++|++
T Consensus 46 ~~~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~-~~~~~~~p~~~~~~~~~~ld~~I~~ 124 (407)
T COG2730 46 QLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWAL-QATDGDNPYLIGLTQLKILDEAINW 124 (407)
T ss_pred eeecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhh-hccCCCCCCeecchHHHHHHHHHHH
Confidence 335566667777887888899999999999999999999999999999999876 3322 23333 3566799999999
Q ss_pred HHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHH
Q 019395 112 AEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKS 191 (341)
Q Consensus 112 a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~ 191 (341)
|.++||+|+||+|++|+++++.++++....... ...+++++++.|++++.||++.+.|+++|++|||+. -...+.|..
T Consensus 125 a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~-~~~~~~w~~ 202 (407)
T COG2730 125 AKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE-ENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG-IVTSETWNG 202 (407)
T ss_pred HHhcCeeEEEEecccCCCCCCcCcccccccccc-cchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc-cCCcccccc
Confidence 999999999999999999999988875433332 457889999999999999999999999999999995 122233333
Q ss_pred HHHHHHHHHH-hcCCCc---eEEEeCC-CCC------CChhh--------hhhcc--CC---CCcEEEEeeecCCCCcc-
Q 019395 192 YYKAGYDAVR-KYTSTA---YVIMSNR-LGP------ADHKE--------LLSFA--SG---LSRVVIDVHYYNLFSNN- 246 (341)
Q Consensus 192 ~~~~~~~aIR-~~~p~~---~v~~~~~-~~~------~~~~~--------~~~~~--~~---~~~~v~~~H~Y~~~~~~- 246 (341)
...++++.|| +....+ +|.++.. +.. ..+.. -...+ ++ ....+++.|.|.+....
T Consensus 203 ~~~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~ 282 (407)
T COG2730 203 GDDEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYGDDVLNG 282 (407)
T ss_pred chHHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCceeeeccchhhhccceeccceeecchhhcC
Confidence 3356666664 444443 4444421 111 00000 00011 12 23445555555331100
Q ss_pred --ccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC-C----CCCCHHHHHHHHHHHHHHHccCCCcEEEec
Q 019395 247 --FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-V----KDASKQDYQRFANAQLDVYGRATFGWAYWA 319 (341)
Q Consensus 247 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~ 319 (341)
.............+......+....+..+.++++||||...+ . .....+..+.+.+.+.+.++. ..+|..|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ge~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~~~ 361 (407)
T COG2730 283 GSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDERKDNVKVYLENQLDVFDT-TTYWINNP 361 (407)
T ss_pred CCCCccCCcccccccceeeecceeecccccceeeeeccccCccccCCCCccchhhHHHHHHhhhhhhhccc-eeEEEeec
Confidence 000001111112222233344444556788899999998773 1 234567788999999999987 88999999
Q ss_pred cccC-CCCCChHHHHHCCCcc
Q 019395 320 HKCE-ANHWSLKWMIENGYIK 339 (341)
Q Consensus 320 ~k~~-~~~W~~~~~~~~g~~~ 339 (341)
++++ ...|+.+.....+..+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~ 382 (407)
T COG2730 362 WSGGNDTGYDIEDDINLGLFP 382 (407)
T ss_pred ccCCCCCccchhhcchhhccc
Confidence 9987 4778777665554443
|
|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-20 Score=176.35 Aligned_cols=183 Identities=21% Similarity=0.247 Sum_probs=132.0
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|.+ ++||+++..... .. ........+.|. +||+.| ++|++.|+++|+|++|++|.|
T Consensus 8 G~atsa~Q~EG~~~~~gkg~s~wd~~~~~-~~---~~~~~~~~~~a~----d~y~~y--~eDi~l~~~~G~~~~R~si~W 77 (427)
T TIGR03356 8 GVATASYQIEGAVNEDGRGPSIWDTFSHT-PG---KVKDGDTGDVAC----DHYHRY--EEDVALMKELGVDAYRFSIAW 77 (427)
T ss_pred eeechHHhhCCCcCCCCCccchhheeccC-CC---cccCCCCCCccc----cHHHhH--HHHHHHHHHcCCCeEEcccch
Confidence 678999999 99855 789999874311 00 111111233444 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..++ |...+.++++++++++++|+.|.++||.+||||||+.-++.-.+. ..|. ++.++.|+++++.++++|
T Consensus 78 sri~-p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P~~l~~~-------gGw~~~~~~~~f~~ya~~~~~~~ 149 (427)
T TIGR03356 78 PRIF-PEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLPQALEDR-------GGWLNRDTAEWFAEYAAVVAERL 149 (427)
T ss_pred hhcc-cCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCccHHHHhc-------CCCCChHHHHHHHHHHHHHHHHh
Confidence 6554 442246788899999999999999999999999998544321111 2266 788999999999999999
Q ss_pred CCCCceeEEEeecCCCCC------------C-CCh-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLAP------------G-VAL-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~~------------~-~~~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
++.... |.++|||+.. . ... ..+.....++++++|+..|+..|.+
T Consensus 150 ~d~v~~--w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha~A~~~~~~~~~~~~IGi 214 (427)
T TIGR03356 150 GDRVKH--WITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHGLAVQALRANGPGAQVGI 214 (427)
T ss_pred CCcCCE--EEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 996554 6799999841 0 110 1223344567788888888644444
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-19 Score=174.12 Aligned_cols=183 Identities=20% Similarity=0.278 Sum_probs=126.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.. +.||+++.+... .-........+.+. +||+.| ++|++.||++|+|+.|++|+|
T Consensus 12 G~atsa~Q~EG~~~~dGkg~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lg~~~yRfsi~W 81 (455)
T PF00232_consen 12 GVATSAYQIEGAWNEDGKGPSIWDTFCHE----PGKVEDGSTGDVAC----DHYHRY--KEDIALMKELGVNAYRFSISW 81 (455)
T ss_dssp EEE--HHHHSSSTTSTTSTTBHHHHHHHS----TTSSTTSSSSSSTT----GHHHHH--HHHHHHHHHHT-SEEEEE--H
T ss_pred EEeceeccccceecCCCCCcccccccccc----cceeeccccCcccc----cchhhh--hHHHHHHHhhccceeeeecch
Confidence 678999999 88844 788988854321 00111111233344 888888 999999999999999999999
Q ss_pred ccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
..+ .|.+ .+..++++++.++++|+.++++||.+||+|||+.-++.-.+. ..|. ++.++.|+++.+.++++
T Consensus 82 ~Ri-~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~l~~~-------ggw~~~~~~~~F~~Ya~~~~~~ 153 (455)
T PF00232_consen 82 SRI-FPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLWLEDY-------GGWLNRETVDWFARYAEFVFER 153 (455)
T ss_dssp HHH-STTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHHHHHH-------TGGGSTHHHHHHHHHHHHHHHH
T ss_pred hhe-eecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccceeec-------ccccCHHHHHHHHHHHHHHHHH
Confidence 654 4554 467889999999999999999999999999998544321111 2276 89999999999999999
Q ss_pred hCCCCceeEEEeecCCCC------------CC-CCh-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 164 YANRPSLAAIELINEPLA------------PG-VAL-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~------------~~-~~~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
|++.... |-++|||.. ++ .+. ..+.....++++++|+..|+..|-+
T Consensus 154 ~gd~V~~--w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi 219 (455)
T PF00232_consen 154 FGDRVKY--WITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGI 219 (455)
T ss_dssp HTTTBSE--EEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEE
T ss_pred hCCCcce--EEeccccceeeccccccccccccccccchhhHHHhhHHHHHHHHHHHHhhcccceEEec
Confidence 9997666 559999985 11 111 1233445577888999888766644
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-18 Score=159.61 Aligned_cols=157 Identities=18% Similarity=0.280 Sum_probs=126.2
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|.++|+.|. |+|.. +.||+++......+ .-.+..+.++++|. +||+.| ++|++.+|++|+|+.|++|.|
T Consensus 11 G~AtAa~Q~EGa~~~dGkg~s~wD~~~~~~~--~~~~~~~~~~~~a~----d~YhrY--keDi~L~~emG~~~~R~SI~W 82 (460)
T COG2723 11 GGATAAFQVEGAWNEDGKGPSDWDVWVHDEI--PGRLVSGDPPEEAS----DFYHRY--KEDIALAKEMGLNAFRTSIEW 82 (460)
T ss_pred ecccccccccCCcCCCCCCCeeeeeeecccc--CCcccCCCCCcccc----chhhhh--HHHHHHHHHcCCCEEEeeeeE
Confidence 567899999 99965 78999886553221 11233445677777 899999 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+.++...+.+.++++++.++++++.|.++||.++|+|||+..++...+..| .|. ++.++.|+++.+.+++||
T Consensus 83 sRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd~P~~L~~~yg------GW~nR~~i~~F~~ya~~vf~~f 156 (460)
T COG2723 83 SRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFDLPLWLQKPYG------GWENRETVDAFARYAATVFERF 156 (460)
T ss_pred EEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccCCcHHHhhccC------CccCHHHHHHHHHHHHHHHHHh
Confidence 7666533333678899999999999999999999999999987765544422 387 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+|.... |-++|||+.
T Consensus 157 ~dkVk~--W~TFNE~n~ 171 (460)
T COG2723 157 GDKVKY--WFTFNEPNV 171 (460)
T ss_pred cCcceE--EEEecchhh
Confidence 997766 449999996
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=145.95 Aligned_cols=227 Identities=22% Similarity=0.313 Sum_probs=139.7
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-----CCCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-----PGSQNGNEHSAT 138 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-----~g~~~~~~~~g~ 138 (341)
.++-|+.||+.|+|+|||.+ +.+|..++- ..++...++.+.|++.||+|+||+|-. ||.|.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRv----wv~P~~~g~---~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~------- 91 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRV----WVNPYDGGY---NDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQN------- 91 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-----SS-TTTTT---TSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B-------
T ss_pred CCCHHHHHHhcCCCeEEEEe----ccCCccccc---CCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCC-------
Confidence 47889999999999999987 345544211 247888889999999999999999953 44443
Q ss_pred CCCccCCc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCC-------CCCChHHHHHHHHHHHHHHHhcCCC
Q 019395 139 RDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLA-------PGVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 139 ~~~~~~w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~-------~~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+..|. ....+...++-+.+.+.+++.- .+-.+++-||-+. .....+.+.++..+.+++||+++|+
T Consensus 92 --~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p~ 169 (332)
T PF07745_consen 92 --KPAAWANLSFDQLAKAVYDYTKDVLQALKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDPN 169 (332)
T ss_dssp ----TTCTSSSHHHHHHHHHHHHHHHHHHHHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSST
T ss_pred --CCccCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCCC
Confidence 234575 3344445566666666665532 2344789999553 3356678999999999999999999
Q ss_pred ceEEEeCCCCC-C-Chhhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEe
Q 019395 207 AYVIMSNRLGP-A-DHKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGE 282 (341)
Q Consensus 207 ~~v~~~~~~~~-~-~~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE 282 (341)
..|+++-..+. . ....+.+.. .+.+..|+.+++|+.|.. .++.+.. .+..++++.++||+|.|
T Consensus 170 ~kV~lH~~~~~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~---------~l~~l~~----~l~~l~~ry~K~V~V~E 236 (332)
T PF07745_consen 170 IKVMLHLANGGDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG---------TLEDLKN----NLNDLASRYGKPVMVVE 236 (332)
T ss_dssp SEEEEEES-TTSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST----------HHHHHH----HHHHHHHHHT-EEEEEE
T ss_pred CcEEEEECCCCchHHHHHHHHHHHhcCCCcceEEEecCCCCcc---------hHHHHHH----HHHHHHHHhCCeeEEEe
Confidence 99999932221 1 112233221 356778999999976542 2222222 23344455578899999
Q ss_pred ecCCCCC------------------CCCCHHHHHHHHHHHHHHHcc----CCCcEEEec
Q 019395 283 WTCEWNV------------------KDASKQDYQRFANAQLDVYGR----ATFGWAYWA 319 (341)
Q Consensus 283 ~g~~~~~------------------~~~~~~~~~~~~~~~~~~~~~----~~~Gw~~W~ 319 (341)
.|..+.. -..+.+..++|+++.+++..+ .++|.|||.
T Consensus 237 t~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~GvfYWe 295 (332)
T PF07745_consen 237 TGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNVPNGGGLGVFYWE 295 (332)
T ss_dssp E---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEEEEE-
T ss_pred ccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEEEeec
Confidence 9976540 113567788998888876554 789999993
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=154.03 Aligned_cols=148 Identities=21% Similarity=0.292 Sum_probs=117.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|.+ ++||+++.+... .. ....+.|. +||+.| ++|++.||++|+|+.|++|+|
T Consensus 12 G~Atsa~QiEG~~~~~Gkg~siwD~~~~~-~~-------~~~~~~a~----d~Y~ry--~eDi~L~~~lG~~~yRfSIsW 77 (469)
T PRK13511 12 GGATAAYQAEGATKTDGKGPVAWDKYLEE-NY-------WFTPDPAS----DFYHRY--PEDLKLAEEFGVNGIRISIAW 77 (469)
T ss_pred EeechHhhhcCCcCCCCCccchhhccccc-CC-------CCCCCccc----chhhhh--HHHHHHHHHhCCCEEEeeccH
Confidence 678999999 98844 789999864310 00 01233444 888888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+++ |...+.++++++++++++|+.|.++||.++|+|||+..++.-.+.+ .|. ++.++.|.++.+.++++|
T Consensus 78 sRI~-P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~G-------GW~n~~~v~~F~~YA~~~~~~f 149 (469)
T PRK13511 78 SRIF-PDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHFDTPEALHSNG-------DWLNRENIDHFVRYAEFCFEEF 149 (469)
T ss_pred hhcC-cCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHHHcC-------CCCCHHHHHHHHHHHHHHHHHh
Confidence 7555 4433467899999999999999999999999999997665433322 277 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+| ... |-.+|||+.
T Consensus 150 gd-Vk~--W~T~NEP~~ 163 (469)
T PRK13511 150 PE-VKY--WTTFNEIGP 163 (469)
T ss_pred CC-CCE--EEEccchhh
Confidence 99 655 559999984
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.3e-16 Score=152.58 Aligned_cols=148 Identities=17% Similarity=0.225 Sum_probs=117.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|.+ ++||+++.+.. ... ....+.|. +||+.| ++|+++|+++|+|+.|++|+|
T Consensus 11 G~AtsA~QvEG~~~~~Gkg~siwD~~~~-~~~-------~~~~~~a~----d~yhry--~eDi~L~~~lG~~~yRfSIsW 76 (467)
T TIGR01233 11 GGATAAYQAEGATHTDGKGPVAWDKYLE-DNY-------WYTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW 76 (467)
T ss_pred eeechhhhcCCCcCCCCCcCchhhcccc-CCC-------CCCCCccC----chhhhH--HHHHHHHHHcCCCEEEEecch
Confidence 678999999 99854 78999986431 000 01223344 888888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+++ |...++++++++++++++|+.|.++||.++|+|||+..++.-.+.+| |. ++.++.|.++.+.++++|
T Consensus 77 sRI~-P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~GG-------W~n~~~v~~F~~YA~~~f~~f 148 (467)
T TIGR01233 77 SRIF-PTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNGD-------FLNRENIEHFIDYAAFCFEEF 148 (467)
T ss_pred hhcc-CCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCCCCcHHHHHcCC-------CCCHHHHHHHHHHHHHHHHHh
Confidence 7555 44334678999999999999999999999999999976654333323 87 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
++ .. -|-.+|||+.
T Consensus 149 gd-Vk--~WiT~NEP~~ 162 (467)
T TIGR01233 149 PE-VN--YWTTFNEIGP 162 (467)
T ss_pred CC-CC--EEEEecchhh
Confidence 85 33 3679999984
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=6.9e-17 Score=156.29 Aligned_cols=157 Identities=18% Similarity=0.268 Sum_probs=118.0
Q ss_pred ceeeeccCC-CCccc--CCccccccccc--C----Ccchhhhhhhh-cCcchHHHHHHHHHhhccCHHHHHHHHHCCCCE
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIV--S----TLRGEYQITNG-FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINA 78 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~--~----~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~ 78 (341)
|..||+.|. |+|.+ +.||+++.+.- . .+.+.- .... ...+.|. +||+.| ++|++.|+++|+|+
T Consensus 13 G~AtsA~QiEGa~~e~Gkg~siwD~~~~~~~~~~~~~~~~~-~~~~~~~~~~A~----D~Yhry--~EDI~Lm~elG~~~ 85 (477)
T PRK15014 13 GGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEV-VPGKYYPNHEAV----DFYGHY--KEDIKLFAEMGFKC 85 (477)
T ss_pred eeecHHHHhCCCcCCCCCcccHhhccccccccCcccccccc-ccCCcCCCCccc----Cccccc--HHHHHHHHHcCCCE
Confidence 678999999 99854 78999886430 0 000000 0000 1223344 899999 99999999999999
Q ss_pred EEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHH
Q 019395 79 VRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVI 157 (341)
Q Consensus 79 VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~ 157 (341)
.|++|.|..+++....+..+++++++++++|+.|.++||.++|+|||+..++.-.+. ...|. ++.++.|++++
T Consensus 86 yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~------yGGW~n~~~~~~F~~Ya 159 (477)
T PRK15014 86 FRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQ------YGSWTNRKVVDFFVRFA 159 (477)
T ss_pred EEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHh------cCCCCChHHHHHHHHHH
Confidence 999999976654322334688899999999999999999999999999766543221 12276 88999999999
Q ss_pred HHHHHHhCCCCceeEEEeecCCC
Q 019395 158 DFLAARYANRPSLAAIELINEPL 180 (341)
Q Consensus 158 ~~la~~y~~~~~v~~~el~NEP~ 180 (341)
+.++++|++.... |-++|||+
T Consensus 160 ~~~f~~fgdrVk~--WiT~NEp~ 180 (477)
T PRK15014 160 EVVFERYKHKVKY--WMTFNEIN 180 (477)
T ss_pred HHHHHHhcCcCCE--EEEecCcc
Confidence 9999999998766 44999997
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=155.59 Aligned_cols=150 Identities=23% Similarity=0.277 Sum_probs=118.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|.+ ++||+++.+... . .....+.|. +||+.| ++|++.||++|+|+.|++|.|
T Consensus 37 G~AtsA~QiEGa~~~~Gkg~SiwD~~~~~-~-------~~~~~~~a~----D~YhrY--~eDI~Lm~~lG~~aYRfSIsW 102 (503)
T PLN02849 37 GAGTSAYQWEGAFDEDGRKPSVWDTFLHS-R-------NMSNGDIAC----DGYHKY--KEDVKLMVETGLDAFRFSISW 102 (503)
T ss_pred EeechhhhhcCCcCCCCCcCcceeeeecc-C-------CCCCCCccc----cHHHhH--HHHHHHHHHcCCCeEEEeccH
Confidence 678999999 98854 789999974311 1 111233344 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+++ |...++++++++++++++|+.|.++||.++|+|||+.-++.-.+. ...|. ++.++.|+++.+.++++|
T Consensus 103 sRI~-P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~dlP~~L~~~------yGGW~nr~~v~~F~~YA~~~f~~f 175 (503)
T PLN02849 103 SRLI-PNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFHYDHPQYLEDD------YGGWINRRIIKDFTAYADVCFREF 175 (503)
T ss_pred HhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecCCCCcHHHHHh------cCCcCCchHHHHHHHHHHHHHHHh
Confidence 6554 444356789999999999999999999999999999765433221 12277 889999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+|....+. .+|||+.
T Consensus 176 gDrVk~Wi--T~NEP~~ 190 (503)
T PLN02849 176 GNHVKFWT--TINEANI 190 (503)
T ss_pred cCcCCEEE--Eecchhh
Confidence 99877644 9999984
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.9e-17 Score=155.24 Aligned_cols=159 Identities=13% Similarity=0.161 Sum_probs=118.2
Q ss_pred ceeeeccCC-CCccc--CCcccccccccC--Ccch------hhhh-hhh-cCcchHHHHHHHHHhhccCHHHHHHHHHCC
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVS--TLRG------EYQI-TNG-FGPDKAPQVLQDHWDSYITDEDFKFLSSNG 75 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~--~~~~------~~~~-~~~-~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G 75 (341)
|..||+.|. |+|.+ +.||+++.+... .+.. .... ... ...+.|. +||+.| ++|+++|+++|
T Consensus 11 G~AtsA~QiEGa~~~~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~----D~Yhry--~eDi~l~~~lG 84 (474)
T PRK09852 11 GGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEAI----DFYHRY--KEDIALMAEMG 84 (474)
T ss_pred eccchHhhcCCCcCCCCCCCchhhccccCCCcccccccccccccccccCcCCCCccC----chhhhh--HHHHHHHHHcC
Confidence 678999999 99854 789998864321 0000 0000 000 1233444 889888 99999999999
Q ss_pred CCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHH
Q 019395 76 INAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTV 154 (341)
Q Consensus 76 ~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~ 154 (341)
+|+.|++|+|..+++...++..+++++++++++|+.|+++||.+||+|||+..++.-.+. ...|. ++.++.|.
T Consensus 85 ~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~~~------~GGW~~~~~~~~F~ 158 (474)
T PRK09852 85 FKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTE------YGSWRNRKMVEFFS 158 (474)
T ss_pred CCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHh------cCCCCCHHHHHHHH
Confidence 999999999976664332334678899999999999999999999999999655432221 12377 78999999
Q ss_pred HHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 155 AVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 155 ~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
++++.++++|++.... |-.+|||+.
T Consensus 159 ~ya~~~~~~fgd~Vk~--WiTfNEPn~ 183 (474)
T PRK09852 159 RYARTCFEAFDGLVKY--WLTFNEINI 183 (474)
T ss_pred HHHHHHHHHhcCcCCe--EEeecchhh
Confidence 9999999999998776 449999983
|
|
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=154.83 Aligned_cols=150 Identities=22% Similarity=0.283 Sum_probs=118.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ ++||+++.+.. .. .....+.|. +||+.| ++|++.||++|+|+.|++|.|
T Consensus 35 G~AtaA~QiEGa~~~~gkg~siwD~~~~-----~~---~~~~~~~a~----D~Yhry--~EDI~L~k~lG~~ayRfSIsW 100 (504)
T PLN02814 35 GAATSAYQWEGAVDEDGRTPSVWDTTSH-----CY---NGGNGDIAS----DGYHKY--KEDVKLMAEMGLESFRFSISW 100 (504)
T ss_pred eeechhhhhcCCcCCCCCccchhheeee-----cc---CCCCCCccc----cHHHhh--HHHHHHHHHcCCCEEEEeccH
Confidence 678999999 88854 78999987431 10 111233344 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..++ |...+..+++++++++++|+.|.++||.++|+|||+.-++.-.+. ...|. ++.++.|.++.+.++++|
T Consensus 101 sRI~-P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~~L~~~------yGGW~n~~~i~~F~~YA~~~f~~f 173 (504)
T PLN02814 101 SRLI-PNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDE------YGGWINRKIIEDFTAFADVCFREF 173 (504)
T ss_pred hhcC-cCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHh------cCCcCChhHHHHHHHHHHHHHHHh
Confidence 7555 443346789999999999999999999999999999766543322 12277 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+|.... |-.+|||+.
T Consensus 174 gdrVk~--WiT~NEP~~ 188 (504)
T PLN02814 174 GEDVKL--WTTINEATI 188 (504)
T ss_pred CCcCCE--EEeccccch
Confidence 997766 449999984
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=154.23 Aligned_cols=152 Identities=22% Similarity=0.277 Sum_probs=118.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... . ......+.|. +||+.| ++|++.||++|+|+.|++|+|
T Consensus 38 G~AtSA~QvEGa~~~~Gkg~siwD~~~~~~----~--~~~~~~~~a~----D~Yhry--~EDi~lmk~lG~~~YRfSIsW 105 (497)
T PLN02998 38 GSGTSAYQVEGAADEDGRTPSIWDVFAHAG----H--SGVAAGNVAC----DQYHKY--KEDVKLMADMGLEAYRFSISW 105 (497)
T ss_pred eeechHHHhCCCcCCCCCccchhhcccccC----c--CCCCCCcccc----cHHHhh--HHHHHHHHHcCCCeEEeeccH
Confidence 678999999 98854 7899998643211 0 0001233344 889888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+++ |...+.++++++++++++|+.+.++||.++|+|||+..++.-.+. ...|. ++.++.|.++.+.++++|
T Consensus 106 sRI~-P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L~~~------yGGW~n~~~v~~F~~YA~~~~~~f 178 (497)
T PLN02998 106 SRLL-PSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALEDE------YGGWLSQEIVRDFTAYADTCFKEF 178 (497)
T ss_pred HhcC-cCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHh------hCCcCCchHHHHHHHHHHHHHHHh
Confidence 7555 443346789999999999999999999999999999766543221 12277 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+|+...+ -.+|||+.
T Consensus 179 gdrVk~W--iT~NEP~~ 193 (497)
T PLN02998 179 GDRVSHW--TTINEVNV 193 (497)
T ss_pred cCcCCEE--EEccCcch
Confidence 9977764 49999994
|
|
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=2e-16 Score=153.13 Aligned_cols=159 Identities=17% Similarity=0.214 Sum_probs=118.3
Q ss_pred ceeeeccCC-CCccc--CCccccccccc--C-Ccch-hhhhhhh--cCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEE
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIV--S-TLRG-EYQITNG--FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 79 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~--~-~~~~-~~~~~~~--~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~V 79 (341)
|..||+.|. |+|.+ +.||+++.+.. . .... ....... ...+.|. +||+.| ++|++.||++|+|+.
T Consensus 11 G~AtsA~QiEGa~~~~gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----D~Yhry--~eDi~Lm~~lG~~~y 84 (476)
T PRK09589 11 GGAVAAHQLEGGWNEGGKGISVADVMTAGAHGVPREITEGVIEGKNYPNHEAI----DFYHRY--KEDIALFAEMGFKCF 84 (476)
T ss_pred eeechHhhhcCCcCCCCCCCchhcccccccccCccccccCccCCCcCCCcccc----cHHHhh--HHHHHHHHHcCCCEE
Confidence 678999999 98854 78999886431 0 0000 0000000 1233344 889889 999999999999999
Q ss_pred EcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHH
Q 019395 80 RIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVID 158 (341)
Q Consensus 80 Rlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~ 158 (341)
|++|+|.++++....+..+++++++++++|+.|.++||.++|+|||+..++.-.+.. ..|. ++.++.|.++.+
T Consensus 85 RfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~~~y------GGW~n~~~i~~F~~YA~ 158 (476)
T PRK09589 85 RTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLVTEY------GGWRNRKLIDFFVRFAE 158 (476)
T ss_pred EeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHHHhc------CCcCChHHHHHHHHHHH
Confidence 999999765543223346889999999999999999999999999997665432221 2277 889999999999
Q ss_pred HHHHHhCCCCceeEEEeecCCCC
Q 019395 159 FLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 159 ~la~~y~~~~~v~~~el~NEP~~ 181 (341)
.++++|+|.... |-.+|||+.
T Consensus 159 ~~f~~fgdrVk~--WiT~NEp~~ 179 (476)
T PRK09589 159 VVFTRYKDKVKY--WMTFNEINN 179 (476)
T ss_pred HHHHHhcCCCCE--EEEecchhh
Confidence 999999997766 449999973
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.4e-15 Score=141.59 Aligned_cols=248 Identities=19% Similarity=0.274 Sum_probs=134.8
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC--CCC-----
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA--PGS----- 129 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~--~g~----- 129 (341)
++|+....++|++.|+++|+|+|||....|..++|.++ .|+ ++.||++|+.|.++||+|||.+-.. |..
T Consensus 5 e~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG-~yd---F~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 5 EQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEG-QYD---FSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp GGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTT-B------HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCC-eee---cHHHHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 45555455999999999999999996545567788764 675 8999999999999999999977432 211
Q ss_pred -------CCCCC-CCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------------------
Q 019395 130 -------QNGNE-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------------------- 182 (341)
Q Consensus 130 -------~~~~~-~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~------------------- 182 (341)
.++.. ..|.+...+..++...+.+.++++.|++||+++|+|++|++-|||...
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY 160 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKY 160 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHh
Confidence 01100 112121222233778889999999999999999999999999998640
Q ss_pred ---------------------------C--C----C-----------hHHHHHHHHHHHHHHHhcCCCceEEEe--CC-C
Q 019395 183 ---------------------------G--V----A-----------LDTLKSYYKAGYDAVRKYTSTAYVIMS--NR-L 215 (341)
Q Consensus 183 ---------------------------~--~----~-----------~~~~~~~~~~~~~aIR~~~p~~~v~~~--~~-~ 215 (341)
+ . . .+.+..++....++||+++|+++|... .. .
T Consensus 161 ~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~~p~~~vt~n~~~~~~ 240 (374)
T PF02449_consen 161 GTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADIIREYDPDHPVTTNFMGSWF 240 (374)
T ss_dssp SSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-EEE-EE-TT--
T ss_pred CCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCcccccc
Confidence 0 0 0 134667788889999999999988854 11 1
Q ss_pred CCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCC---CCCCC-
Q 019395 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE---WNVKD- 291 (341)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~---~~~~~- 291 (341)
...+...+.+. -.+++.+.|.... ............ +...+ ++.. ..++|++|.|.-.. +...+
T Consensus 241 ~~~d~~~~a~~-----~D~~~~d~Y~~~~-~~~~~~~~~~~a-~~~dl---~R~~--~~~kpf~v~E~~~g~~~~~~~~~ 308 (374)
T PF02449_consen 241 NGIDYFKWAKY-----LDVVSWDSYPDGS-FDFYDDDPYSLA-FNHDL---MRSL--AKGKPFWVMEQQPGPVNWRPYNR 308 (374)
T ss_dssp -SS-HHHHGGG-----SSSEEEEE-HHHH-HTTTT--TTHHH-HHHHH---HHHH--TTT--EEEEEE--S--SSSSS--
T ss_pred CcCCHHHHHhh-----CCcceeccccCcc-cCCCCCCHHHHH-HHHHH---HHhh--cCCCceEeecCCCCCCCCccCCC
Confidence 22222222222 2467888886510 000011111111 11111 1111 34678999999543 11111
Q ss_pred -CCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 292 -ASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 292 -~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
..+..++.+. +.++..+.-|-.||.|+..
T Consensus 309 ~~~pg~~~~~~---~~~~A~Ga~~i~~~~wr~~ 338 (374)
T PF02449_consen 309 PPRPGELRLWS---WQAIAHGADGILFWQWRQS 338 (374)
T ss_dssp ---TTHHHHHH---HHHHHTT-S-EEEC-SB--
T ss_pred CCCCCHHHHHH---HHHHHHhCCeeEeeeccCC
Confidence 1122333332 2233356668899999864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.66 E-value=3e-16 Score=152.08 Aligned_cols=159 Identities=16% Similarity=0.210 Sum_probs=118.5
Q ss_pred ceeeeccCC-CCccc--CCcccccccccC--Cc---chhhh---hhhh--cCcchHHHHHHHHHhhccCHHHHHHHHHCC
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVS--TL---RGEYQ---ITNG--FGPDKAPQVLQDHWDSYITDEDFKFLSSNG 75 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~--~~---~~~~~---~~~~--~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G 75 (341)
|..||+.|. |+|.+ +.||+++.+... .. ...-. ..+. .+.+.|. +||+.| ++|+++||++|
T Consensus 13 G~AtsA~QiEGa~~~~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----d~Yhry--~eDi~Lm~~lG 86 (478)
T PRK09593 13 GGATAANQCEGAYNVDGRGLANVDVVPIGEDRFPIITGEKKMFDFEEGYFYPAKEAI----DMYHHY--KEDIALFAEMG 86 (478)
T ss_pred eeechHHHhCCCcCCCCCccchhhccccCcCcccccccccccccccccccCCCCccc----chHHhh--HHHHHHHHHcC
Confidence 678999999 98854 789999863310 01 00000 0000 0233344 889888 99999999999
Q ss_pred CCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHH
Q 019395 76 INAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTV 154 (341)
Q Consensus 76 ~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~ 154 (341)
+|+.|++|+|.++++...++.++++++++++++|+.+.++||.++|+|||+..++.-.+.. ..|. ++.++.|.
T Consensus 87 ~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~~~~------GGW~n~~~v~~F~ 160 (478)
T PRK09593 87 FKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLIEEY------GGWRNRKMVGFYE 160 (478)
T ss_pred CCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHHhhc------CCCCChHHHHHHH
Confidence 9999999999755543223346889999999999999999999999999997665433221 2277 78999999
Q ss_pred HHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 155 AVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 155 ~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
++.+.++++|++....+ -.+|||+.
T Consensus 161 ~YA~~~~~~fgdrVk~W--iT~NEP~~ 185 (478)
T PRK09593 161 RLCRTLFTRYKGLVKYW--LTFNEINM 185 (478)
T ss_pred HHHHHHHHHhcCcCCEE--Eeecchhh
Confidence 99999999999977764 49999984
|
|
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.3e-13 Score=136.83 Aligned_cols=225 Identities=19% Similarity=0.180 Sum_probs=141.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC--CCCCCCCCCCCCCCCc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA--PGSQNGNEHSATRDGF 142 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~--~g~~~~~~~~g~~~~~ 142 (341)
..||+.||++|+|+||++.. | ..+ ++++.|.++||.|+-++-.. ..... ....+.....
T Consensus 316 ~~d~~l~K~~G~N~vR~sh~------p-----~~~-------~~~~~cD~~GllV~~E~p~~~~~~~~~-~~~~~~~~~~ 376 (604)
T PRK10150 316 VHDHNLMKWIGANSFRTSHY------P-----YSE-------EMLDLADRHGIVVIDETPAVGLNLSFG-AGLEAGNKPK 376 (604)
T ss_pred HHHHHHHHHCCCCEEEeccC------C-----CCH-------HHHHHHHhcCcEEEEeccccccccccc-cccccccccc
Confidence 67999999999999998421 1 111 67899999999999876321 10000 0000000011
Q ss_pred cCCc-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC-C
Q 019395 143 QEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL-G 216 (341)
Q Consensus 143 ~~w~-----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~-~ 216 (341)
..|. +...+.+.+.++.+++|++++|.|++|.+.||+.. ..+....+++++++.+|+.||+++|...... .
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~ 453 (604)
T PRK10150 377 ETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPAS---REQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453 (604)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCc---cchhHHHHHHHHHHHHHhhCCCCceEEEecccC
Confidence 1222 35667788899999999999999999999999864 2346678899999999999999999987421 1
Q ss_pred CCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC-------C
Q 019395 217 PADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-------V 289 (341)
Q Consensus 217 ~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~-------~ 289 (341)
...... ....-.|+++|.|..+-.. ..... .........+..+.+..++|++++|||+... .
T Consensus 454 ~~~~~~-----~~~~~Dv~~~N~Y~~wy~~--~~~~~----~~~~~~~~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~ 522 (604)
T PRK10150 454 TPDTDT-----VSDLVDVLCLNRYYGWYVD--SGDLE----TAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYD 522 (604)
T ss_pred Cccccc-----ccCcccEEEEcccceecCC--CCCHH----HHHHHHHHHHHHHHHhcCCCEEEEccCCccccccccCCC
Confidence 111011 1223478999888653211 00111 1111111122222222367899999996331 1
Q ss_pred CCCCHHHHHHHHHHHHHHHcc--CCCcEEEecccc
Q 019395 290 KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 322 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~ 322 (341)
...+.+....+++..++++++ .-+|-|.|+|..
T Consensus 523 ~~~~ee~q~~~~~~~~~~~~~~p~~~G~~iW~~~D 557 (604)
T PRK10150 523 DMWSEEYQCAFLDMYHRVFDRVPAVVGEQVWNFAD 557 (604)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCceEEEEEEeeec
Confidence 223466667778888877764 678999999874
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.2e-13 Score=118.32 Aligned_cols=230 Identities=19% Similarity=0.312 Sum_probs=142.6
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCC--CCCCccc--chHHHHHHHHHHHHHcCCeEEEecCCC-----CCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLHAA-----PGSQNGNE 134 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~~~~~~--~~l~~ld~~i~~a~~~gi~vildlh~~-----~g~~~~~~ 134 (341)
.++-|+.||+.|+|.|||.| +.+|. .+..|-. ..++..-++-+.|++.||+|++|+|-. |+.|.
T Consensus 65 ~qD~~~iLK~~GvNyvRlRv----wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYSDfwaDPakQ~--- 137 (403)
T COG3867 65 RQDALQILKNHGVNYVRLRV----WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYSDFWADPAKQK--- 137 (403)
T ss_pred HHHHHHHHHHcCcCeEEEEE----ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccchhhccChhhcC---
Confidence 36778999999999999987 23332 2233422 246666677789999999999999954 33222
Q ss_pred CCCCCCCccCCc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCC-------CCCChHHHHHHHHHHHHHHHh
Q 019395 135 HSATRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLA-------PGVALDTLKSYYKAGYDAVRK 202 (341)
Q Consensus 135 ~~g~~~~~~~w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~-------~~~~~~~~~~~~~~~~~aIR~ 202 (341)
.+..|. ...+....++-+...+.+++.- .+-..++-||-+. .....+.+..+..+.+++||+
T Consensus 138 ------kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avre 211 (403)
T COG3867 138 ------KPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVRE 211 (403)
T ss_pred ------CcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhh
Confidence 344565 2333444466666666666543 2334679999765 223677899999999999999
Q ss_pred cCCCceEEEeCCCC--CCChhhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCce
Q 019395 203 YTSTAYVIMSNRLG--PADHKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 278 (341)
Q Consensus 203 ~~p~~~v~~~~~~~--~~~~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv 278 (341)
++|+.+|+++-.-+ .+-+..+.+.. .+-+..|+...+|+.|+. .+..+. ..+..++...++.|
T Consensus 212 v~p~ikv~lHla~g~~n~~y~~~fd~ltk~nvdfDVig~SyYpyWhg---------tl~nL~----~nl~dia~rY~K~V 278 (403)
T COG3867 212 VSPTIKVALHLAEGENNSLYRWIFDELTKRNVDFDVIGSSYYPYWHG---------TLNNLT----TNLNDIASRYHKDV 278 (403)
T ss_pred cCCCceEEEEecCCCCCchhhHHHHHHHHcCCCceEEeeeccccccC---------cHHHHH----hHHHHHHHHhcCeE
Confidence 99999999983211 12223333321 355678899888866542 122221 22334455557779
Q ss_pred EEEeecCCCCC---CC---------------CCHHHHHHHHHHHHHHH----ccCCCcEEEec
Q 019395 279 FVGEWTCEWNV---KD---------------ASKQDYQRFANAQLDVY----GRATFGWAYWA 319 (341)
Q Consensus 279 ~vGE~g~~~~~---~~---------------~~~~~~~~~~~~~~~~~----~~~~~Gw~~W~ 319 (341)
+|-|-+.+++. ++ .+......|+++.+++- ..++.|-|||.
T Consensus 279 mV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nvp~~~GlGvFYWE 341 (403)
T COG3867 279 MVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNVPKSNGLGVFYWE 341 (403)
T ss_pred EEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhCCCCCceEEEEec
Confidence 99998764421 00 01122345555555443 34689999995
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.4e-14 Score=134.81 Aligned_cols=156 Identities=21% Similarity=0.248 Sum_probs=121.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|.+|+++|. |.+.+ +.||+++.+...... ..+.....+.|. ++|+.| ++|++.|+++|+++.|++|+|
T Consensus 44 GtAtSAyQ~EGA~~e~gRg~svWD~f~~~~p~---~~~~~~ngdva~----D~Yh~y--keDv~Lmk~lgv~afRFSIsW 114 (524)
T KOG0626|consen 44 GTATSAYQVEGAANEDGRGPSVWDTFTHKYPG---KICDGSNGDVAV----DFYHRY--KEDVKLMKELGVDAFRFSISW 114 (524)
T ss_pred eccchHHHhhhhhccCCCCCchhhhhhccCCc---ccccCCCCCeec----hhhhhh--HHHHHHHHHcCCCeEEEEeeh
Confidence 567889998 87754 789999875522111 122222234454 677777 999999999999999999999
Q ss_pred ccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
.+.++... ....++++++++..+|+...++||.++|+|.|..-+|...+..| .|. +..++.|.++.+.+.++
T Consensus 115 SRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfHwDlPq~LeDeYg------GwLn~~ivedF~~yA~~CF~~ 188 (524)
T KOG0626|consen 115 SRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFHWDLPQALEDEYG------GWLNPEIVEDFRDYADLCFQE 188 (524)
T ss_pred HhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEecCCCCHHHHHHhc------cccCHHHHHHHHHHHHHHHHH
Confidence 87765444 34578899999999999999999999999999987776554322 277 88999999999999999
Q ss_pred hCCCCceeEEEeecCCCC
Q 019395 164 YANRPSLAAIELINEPLA 181 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~ 181 (341)
|+|+... |-.+|||+.
T Consensus 189 fGDrVK~--WiT~NEP~v 204 (524)
T KOG0626|consen 189 FGDRVKH--WITFNEPNV 204 (524)
T ss_pred hccccee--eEEecccce
Confidence 9997665 559999994
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.2e-14 Score=130.48 Aligned_cols=259 Identities=13% Similarity=0.096 Sum_probs=162.1
Q ss_pred HHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc-ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC--C
Q 019395 51 APQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW-WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA--P 127 (341)
Q Consensus 51 ~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~-~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~--~ 127 (341)
+...+-.||......+|++.++.+|++.+|+.|-- ....+ ..+....+....+++.+++.|..++|+|++.+-.- .
T Consensus 15 anikmw~~~~~~ei~~dle~a~~vg~k~lR~fiLDgEdc~d-~~G~~na~s~~~y~~~fla~a~~l~lkvlitlivg~~h 93 (587)
T COG3934 15 ANIKMWPAIGNREIKADLEPAGFVGVKDLRLFILDGEDCRD-KEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIVGLKH 93 (587)
T ss_pred hhhhHHHHhhhhhhhcccccccCccceeEEEEEecCcchhh-hhceecccccHHHHHHHhhhcccCcceEEEEEeecccc
Confidence 34445567766666899999999999999996421 11111 11222223359999999999999999999987532 1
Q ss_pred -CCCCC--CCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC-CCCChHHHHHHHHHHHHHHHhc
Q 019395 128 -GSQNG--NEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-PGVALDTLKSYYKAGYDAVRKY 203 (341)
Q Consensus 128 -g~~~~--~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~-~~~~~~~~~~~~~~~~~aIR~~ 203 (341)
|+.|- -+.+++.+......++.+..+.++++.|++.||.+|+|.+|.+-|||.. .+.+..++..|...++..|+.+
T Consensus 94 mgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~l 173 (587)
T COG3934 94 MGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWL 173 (587)
T ss_pred cCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhcc
Confidence 11110 1111222222222256667788999999999999999999999999876 2456679999999999999999
Q ss_pred CCCceEEEeCCCCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCC-CceEEEe
Q 019395 204 TSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG-PLTFVGE 282 (341)
Q Consensus 204 ~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pv~vGE 282 (341)
||+++|.+++.... +..+...-....-..-+.|.|..|+.+ + ..+....+...+.+..+.-+ .||++.|
T Consensus 174 dd~hlvsvGD~~sp--~~~~~pyN~r~~vDya~~hLY~hyd~s-----l---~~r~s~~yg~~~l~i~~~~g~~pV~lee 243 (587)
T COG3934 174 DDGHLVSVGDPASP--WPQYAPYNARFYVDYAANHLYRHYDTS-----L---VSRVSTVYGKPYLDIPTIMGWQPVNLEE 243 (587)
T ss_pred CCCCeeecCCcCCc--ccccCCcccceeeccccchhhhhccCC-----h---hheeeeeecchhhccchhcccceeeccc
Confidence 99999999864221 111111100111123678888654421 1 01111111111122223334 7899999
Q ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 283 WTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 283 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
||.+..........+..|... ++...+.|..+||+...
T Consensus 244 fGfsta~g~e~s~ayfiw~~l---al~~ggdGaLiwclsdf 281 (587)
T COG3934 244 FGFSTAFGQENSPAYFIWIRL---ALDTGGDGALIWCLSDF 281 (587)
T ss_pred cCCcccccccccchhhhhhhh---HHhhcCCceEEEEecCC
Confidence 998764333333445555544 56667889999999744
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.2e-10 Score=105.40 Aligned_cols=120 Identities=19% Similarity=0.275 Sum_probs=83.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+.|+..||++|+|+||+... |. . .++++.|.++||.|+.++........ ...+.. ....
T Consensus 39 ~~d~~l~k~~G~N~iR~~h~------p~--~----------~~~~~~cD~~GilV~~e~~~~~~~~~--~~~~~~-~~~~ 97 (298)
T PF02836_consen 39 ERDLELMKEMGFNAIRTHHY------PP--S----------PRFYDLCDELGILVWQEIPLEGHGSW--QDFGNC-NYDA 97 (298)
T ss_dssp HHHHHHHHHTT-SEEEETTS----------S----------HHHHHHHHHHT-EEEEE-S-BSCTSS--SSTSCT-SCTT
T ss_pred HHHHHHHHhcCcceEEcccc------cC--c----------HHHHHHHhhcCCEEEEeccccccCcc--ccCCcc-ccCC
Confidence 89999999999999998431 11 1 27789999999999998754211000 000100 0000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
-.+...+.+.+-++.+++|++++|.|+.|.+.||+ ....+++++++.+|+.||+++|....
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 98 DDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp TSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeecc
Confidence 01466778889999999999999999999999999 56677889999999999999998875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-09 Score=95.58 Aligned_cols=204 Identities=17% Similarity=0.204 Sum_probs=126.2
Q ss_pred cccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-----hhHHHHHHHHHHHHH
Q 019395 87 IANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLA 161 (341)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-----~~~~~~~~~~~~~la 161 (341)
...+|.++ .+ .++.+|+++++|+++||+| ..|..- +++ ..+.|. +...+.+.++++.++
T Consensus 4 ~~~ep~~G-~~---n~~~~D~~~~~a~~~gi~v--~gH~l~------W~~----~~P~W~~~~~~~~~~~~~~~~i~~v~ 67 (254)
T smart00633 4 DSTEPSRG-QF---NFSGADAIVNFAKENGIKV--RGHTLV------WHS----QTPDWVFNLSKETLLARLENHIKTVV 67 (254)
T ss_pred ccccCCCC-cc---ChHHHHHHHHHHHHCCCEE--EEEEEe------ecc----cCCHhhhcCCHHHHHHHHHHHHHHHH
Confidence 34455553 44 3899999999999999997 233221 000 112243 355678889999999
Q ss_pred HHhCCCCceeEEEeecCCCCCCC------ChHHHH--HHHHHHHHHHHhcCCCceEEEeCCC-CCC--Ch---hhhh---
Q 019395 162 ARYANRPSLAAIELINEPLAPGV------ALDTLK--SYYKAGYDAVRKYTSTAYVIMSNRL-GPA--DH---KELL--- 224 (341)
Q Consensus 162 ~~y~~~~~v~~~el~NEP~~~~~------~~~~~~--~~~~~~~~aIR~~~p~~~v~~~~~~-~~~--~~---~~~~--- 224 (341)
+||++. |..||++|||...+. ...... .|+..+++++|+++|+..+++.+-. .+. .. ..+.
T Consensus 68 ~ry~g~--i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Ndy~~~~~~~k~~~~~~~v~~l 145 (254)
T smart00633 68 GRYKGK--IYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYNDYNTEEPNAKRQAIYELVKKL 145 (254)
T ss_pred HHhCCc--ceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEeccCCcCccHHHHHHHHHHHHH
Confidence 999985 666999999986321 111112 6889999999999999999997521 111 11 1111
Q ss_pred -hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHH
Q 019395 225 -SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANA 303 (341)
Q Consensus 225 -~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~ 303 (341)
....+.+-+-+..|.+... .+ ++.+. +.+..+++. +.||+|+|+...... +.+...+++++
T Consensus 146 ~~~g~~iDgiGlQ~H~~~~~------~~----~~~~~----~~l~~~~~~-g~pi~iTE~dv~~~~---~~~~qA~~~~~ 207 (254)
T smart00633 146 KAKGVPIDGIGLQSHLSLGS------PN----IAEIR----AALDRFASL-GLEIQITELDISGYP---NPQAQAADYEE 207 (254)
T ss_pred HHCCCccceeeeeeeecCCC------CC----HHHHH----HHHHHHHHc-CCceEEEEeecCCCC---cHHHHHHHHHH
Confidence 1112345566777876321 11 12222 223334444 778999999987642 22555667777
Q ss_pred HHHHHcc--CCCcEEEeccccCCCCC
Q 019395 304 QLDVYGR--ATFGWAYWAHKCEANHW 327 (341)
Q Consensus 304 ~~~~~~~--~~~Gw~~W~~k~~~~~W 327 (341)
.+.++-+ ...|.++|.+... ..|
T Consensus 208 ~l~~~~~~p~v~gi~~Wg~~d~-~~W 232 (254)
T smart00633 208 VFKACLAHPAVTGVTVWGVTDK-YSW 232 (254)
T ss_pred HHHHHHcCCCeeEEEEeCCccC-Ccc
Confidence 7766554 4579999998743 445
|
|
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.3e-10 Score=109.07 Aligned_cols=259 Identities=17% Similarity=0.201 Sum_probs=125.1
Q ss_pred hHHHHHHHHHhhccCHHHHHHHH-HCCCCEEEcCcccccccCCC--------CC-CCcccchHHHHHHHHHHHHHcCCeE
Q 019395 50 KAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIANDPT--------PP-KPFVGGSSKVLDNAFDWAEKYGVKV 119 (341)
Q Consensus 50 ~~~~~~~~~~~~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~--------~~-~~~~~~~l~~ld~~i~~a~~~gi~v 119 (341)
.+...+...| ...+..++ +.||..||+. +.+-++- .+ .+| .+..||++++...++||++
T Consensus 32 ~a~~~l~~~~-----q~~l~~~~~~~gf~yvR~h---~l~~ddm~~~~~~~~~~~~~Y---nf~~lD~i~D~l~~~g~~P 100 (486)
T PF01229_consen 32 RANLLLRADW-----QEQLRELQEELGFRYVRFH---GLFSDDMMVYSESDEDGIPPY---NFTYLDQILDFLLENGLKP 100 (486)
T ss_dssp -GGGGGBHHH-----HHHHHHHHCCS--SEEEES----TTSTTTT-EEEEETTEEEEE-----HHHHHHHHHHHHCT-EE
T ss_pred chHHHhhHHH-----HHHHHHHHhccCceEEEEE---eeccCchhhccccccCCCCcC---ChHHHHHHHHHHHHcCCEE
Confidence 3444455566 66677775 6899999984 2221110 00 013 3899999999999999999
Q ss_pred EEecCCCCCCCCCCCCCCCCCCccCCc--hhHHHHHHHHHHHHHH----HhCCC-CceeEEEeecCCCCCC----CChHH
Q 019395 120 IVDLHAAPGSQNGNEHSATRDGFQEWG--DSNVADTVAVIDFLAA----RYANR-PSLAAIELINEPLAPG----VALDT 188 (341)
Q Consensus 120 ildlh~~~g~~~~~~~~g~~~~~~~w~--~~~~~~~~~~~~~la~----~y~~~-~~v~~~el~NEP~~~~----~~~~~ 188 (341)
+|.|--.|......... ......+. +...+.+.++++.+++ ||+.. -.-+-||++|||.... .+.++
T Consensus 101 ~vel~f~p~~~~~~~~~--~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~f~~~~~~~e 178 (486)
T PF01229_consen 101 FVELGFMPMALASGYQT--VFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKDFWWDGTPEE 178 (486)
T ss_dssp EEEE-SB-GGGBSS--E--ETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTTTSGGG-HHH
T ss_pred EEEEEechhhhcCCCCc--cccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCcccccCCCCHHH
Confidence 99997666321100000 00000011 3455666666555555 45321 2336699999999732 23457
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEeC-CCCCCC-hhhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhh---HHHHh
Q 019395 189 LKSYYKAGYDAVRKYTSTAYVIMSN-RLGPAD-HKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNI---DYVNN 261 (341)
Q Consensus 189 ~~~~~~~~~~aIR~~~p~~~v~~~~-~~~~~~-~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~---~~~~~ 261 (341)
+.++|+.++++||+++|...|.-.+ .+.... ...++.+. ....-..+++|.|..-............+ +.+..
T Consensus 179 y~~ly~~~~~~iK~~~p~~~vGGp~~~~~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~~~~~~~~~~~~~~~~~~ 258 (486)
T PF01229_consen 179 YFELYDATARAIKAVDPELKVGGPAFAWAYDEWCEDFLEFCKGNNCPLDFISFHSYGTDSAEDINENMYERIEDSRRLFP 258 (486)
T ss_dssp HHHHHHHHHHHHHHH-TTSEEEEEEEETT-THHHHHHHHHHHHCT---SEEEEEEE-BESESE-SS-EEEEB--HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCcccCccccccHHHHHHHHHHHHhcCCCCCCEEEEEecccccccccchhHHhhhhhHHHHHH
Confidence 8999999999999999988764221 222111 23444332 23455789999996311111111111111 11111
Q ss_pred hhhhhhhhhhcc--CCCceEEEeecCCCCCCCCCH--HHHHHHHHH-HHHHHccCCCcEEEeccc
Q 019395 262 QRASDLGAVTTS--NGPLTFVGEWTCEWNVKDASK--QDYQRFANA-QLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 262 ~~~~~~~~~~~~--~~~pv~vGE~g~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~Gw~~W~~k 321 (341)
........+... ...|+.++||+.......... ....+|+-. .++......-+..+|++.
T Consensus 259 ~~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~~~l~~~sywt~s 323 (486)
T PF01229_consen 259 ELKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAKNLLSNDGAFLDSFSYWTFS 323 (486)
T ss_dssp HHHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH-HHHHGGGT-SEEEES-SB
T ss_pred HHHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHHHHHHhhhhhhhhhhccchh
Confidence 111111112222 245799999997653221111 133444333 666655433468899986
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.2e-08 Score=102.48 Aligned_cols=115 Identities=22% Similarity=0.263 Sum_probs=82.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec----CCCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQNGNEHSATRD 140 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl----h~~~g~~~~~~~~g~~~ 140 (341)
++|++.||++|+|+||++. + |. .+ ++.+.|.++||+|+-+. |.++... .... ..
T Consensus 358 ~~dl~lmK~~g~NavR~sH-y-----P~--~~----------~fydlcDe~GllV~dE~~~e~~g~~~~~-~~~~---~~ 415 (1021)
T PRK10340 358 EKDIQLMKQHNINSVRTAH-Y-----PN--DP----------RFYELCDIYGLFVMAETDVESHGFANVG-DISR---IT 415 (1021)
T ss_pred HHHHHHHHHCCCCEEEecC-C-----CC--CH----------HHHHHHHHCCCEEEECCcccccCccccc-cccc---cc
Confidence 7899999999999999852 1 11 11 67799999999999875 3321100 0000 00
Q ss_pred CccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 141 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 141 ~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
.. +...+.+.+-++.+++|++++|.|+.|.+.||... + . ...++++.+|+.||.++|...+
T Consensus 416 ~~----p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~-g---~----~~~~~~~~~k~~DptR~v~~~~ 476 (1021)
T PRK10340 416 DD----PQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGY-G---C----NIRAMYHAAKALDDTRLVHYEE 476 (1021)
T ss_pred CC----HHHHHHHHHHHHHHHHhCCCCCEEEEEECccCccc-c---H----HHHHHHHHHHHhCCCceEEeCC
Confidence 01 34456677778999999999999999999999853 1 1 2368899999999999997653
|
|
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.1e-09 Score=80.27 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=49.3
Q ss_pred HHHHhCCCCceeEEEeecC-CCCC---------CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhhhccCC
Q 019395 160 LAARYANRPSLAAIELINE-PLAP---------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG 229 (341)
Q Consensus 160 la~~y~~~~~v~~~el~NE-P~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~~~ 229 (341)
+.++|++++.|++|||.|| |... ....+.+.+|++++++.||+++|+++|.++. ++ .....+... ..
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~-~~-~~~~~~~~~-~~ 77 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGF-WG-GDWEDLEQL-QA 77 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B----S-TTHHHHS---
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeec-cc-CCHHHHHHh-ch
Confidence 4689999999999999999 7621 1234678999999999999999999998762 22 122233333 22
Q ss_pred CCcEEEEeeec
Q 019395 230 LSRVVIDVHYY 240 (341)
Q Consensus 230 ~~~~v~~~H~Y 240 (341)
..-.++++|.|
T Consensus 78 ~~~DvisfH~Y 88 (88)
T PF12876_consen 78 ENLDVISFHPY 88 (88)
T ss_dssp TT-SSEEB-EE
T ss_pred hcCCEEeeecC
Confidence 45579999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-07 Score=84.97 Aligned_cols=218 Identities=16% Similarity=0.188 Sum_probs=101.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+.|+..|+++|+|+||+ | .++|.. .-|..++.+.+.||||||||-....+.+... ..+.
T Consensus 56 ~rDi~~l~~LgiNtIRV---Y--~vdp~~----------nHd~CM~~~~~aGIYvi~Dl~~p~~sI~r~~------P~~s 114 (314)
T PF03198_consen 56 KRDIPLLKELGINTIRV---Y--SVDPSK----------NHDECMSAFADAGIYVILDLNTPNGSINRSD------PAPS 114 (314)
T ss_dssp HHHHHHHHHHT-SEEEE---S-----TTS------------HHHHHHHHHTT-EEEEES-BTTBS--TTS----------
T ss_pred HHhHHHHHHcCCCEEEE---E--EeCCCC----------CHHHHHHHHHhCCCEEEEecCCCCccccCCC------CcCC
Confidence 89999999999999998 2 344432 2567888899999999999998755544211 1123
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CChHHHHHHHHHHHHHHHhcCCCceEEEe-CCCCCCCh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMS-NRLGPADH 220 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~~v~~~-~~~~~~~~ 220 (341)
|..... +....+.+.|+.+++++||-+-||-.... ....-++...+++-+-|++... +.|-|+ ..-.....
T Consensus 115 w~~~l~----~~~~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~-R~IPVGYsaaD~~~~ 189 (314)
T PF03198_consen 115 WNTDLL----DRYFAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGY-RSIPVGYSAADDAEI 189 (314)
T ss_dssp --HHHH----HHHHHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEEE---TTT
T ss_pred CCHHHH----HHHHHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceeEEccCChhH
Confidence 543333 34445556678899999999999987532 2234566666666667777655 334444 11111111
Q ss_pred -hhhhhcc----CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH-
Q 019395 221 -KELLSFA----SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK- 294 (341)
Q Consensus 221 -~~~~~~~----~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~- 294 (341)
..+.++. +...-..+.+-.|.+=+. .+.+. ..+......++. ...|++.+||||-... ...-
T Consensus 190 r~~~a~Yl~Cg~~~~~iDf~g~N~Y~WCg~----Stf~~------SGy~~l~~~f~~-y~vPvffSEyGCn~~~-pR~f~ 257 (314)
T PF03198_consen 190 RQDLANYLNCGDDDERIDFFGLNSYEWCGD----STFET------SGYDRLTKEFSN-YSVPVFFSEYGCNTVT-PRTFT 257 (314)
T ss_dssp HHHHHHHTTBTT-----S-EEEEE----SS------HHH------HSHHHHHHHHTT--SS-EEEEEE---SSS-S---T
T ss_pred HHHHHHHhcCCCcccccceeeeccceecCC----Ccccc------ccHHHHHHHhhC-CCCCeEEcccCCCCCC-Cccch
Confidence 1222222 122345777788864321 11110 112222222332 3567999999996421 1111
Q ss_pred HHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 295 QDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
+...-|-....++|. |-+...|-.|.
T Consensus 258 ev~aly~~~Mt~v~S----GGivYEy~~e~ 283 (314)
T PF03198_consen 258 EVPALYSPEMTDVWS----GGIVYEYFQEA 283 (314)
T ss_dssp HHHHHTSHHHHTTEE----EEEES-SB--S
T ss_pred HhHHhhCccchhhee----ceEEEEEeccC
Confidence 112223334444454 66667776654
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-07 Score=100.32 Aligned_cols=115 Identities=18% Similarity=0.225 Sum_probs=82.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCCCCCCcc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g~~~~~~ 143 (341)
++||+.||++|+|+||++. + |. . .++.++|-++||+|+-+.-.. .|... .+.....
T Consensus 374 ~~di~lmK~~g~NaVR~sH-y-----P~--~----------p~fydlcDe~GilV~dE~~~e~hg~~~----~~~~~~d- 430 (1027)
T PRK09525 374 VQDILLMKQHNFNAVRCSH-Y-----PN--H----------PLWYELCDRYGLYVVDEANIETHGMVP----MNRLSDD- 430 (1027)
T ss_pred HHHHHHHHHCCCCEEEecC-C-----CC--C----------HHHHHHHHHcCCEEEEecCccccCCcc----ccCCCCC-
Confidence 6799999999999999842 1 11 1 166799999999999885211 01000 0000011
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+...+.+.+-++.+++|.+++|.|+.|.+.||+.. +. -..++++.+|+.||.++|...+
T Consensus 431 ---p~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~-g~-------~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 431 ---PRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGH-GA-------NHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred ---HHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCc-Ch-------hHHHHHHHHHhhCCCCcEEECC
Confidence 34556777889999999999999999999999863 11 1367889999999999998864
|
|
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.9e-08 Score=88.67 Aligned_cols=137 Identities=12% Similarity=0.126 Sum_probs=82.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc-c-CC--CC--------C-----CCcccchHHHHHHHHHHHHHcCCeEEEe-cCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA-N-DP--TP--------P-----KPFVGGSSKVLDNAFDWAEKYGVKVIVD-LHAA 126 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~-~-~~--~~--------~-----~~~~~~~l~~ld~~i~~a~~~gi~vild-lh~~ 126 (341)
+..++..++.|||.||+.+.-... . .+ .+ + ...++++++.+|++|+.|.++||.+-|= +|+.
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~ 112 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGC 112 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS-HH
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECC
Confidence 667899999999999997642211 1 11 00 0 1145779999999999999999998554 4522
Q ss_pred CCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 019395 127 PGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 127 ~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
+.. .+.+..|. .....+...++++.|++||+..|+|+ |.|.||=. ....-.+.++++.+.||+.+|.
T Consensus 113 ~~~-~~~Wg~~~-------~~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~~----~~~~~~~~w~~~~~~i~~~dp~ 179 (289)
T PF13204_consen 113 PYV-PGTWGFGP-------NIMPPENAERYGRYVVARYGAYPNVI-WILGGDYF----DTEKTRADWDAMARGIKENDPY 179 (289)
T ss_dssp HHH--------T-------TSS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS------TTSSHHHHHHHHHHHHHH--S
T ss_pred ccc-cccccccc-------cCCCHHHHHHHHHHHHHHHhcCCCCE-EEecCccC----CCCcCHHHHHHHHHHHHhhCCC
Confidence 210 00011110 01456788899999999999999988 99999981 1234455667888999999998
Q ss_pred ceEEEeCC
Q 019395 207 AYVIMSNR 214 (341)
Q Consensus 207 ~~v~~~~~ 214 (341)
.++.+++.
T Consensus 180 ~L~T~H~~ 187 (289)
T PF13204_consen 180 QLITIHPC 187 (289)
T ss_dssp S-EEEEE-
T ss_pred CcEEEeCC
Confidence 89999853
|
|
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=87.75 Aligned_cols=136 Identities=19% Similarity=0.243 Sum_probs=83.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-+++||++|+|+|-+.|.| ...+|.+ +.|+-+....|+++|+.|+++||+|||-.=-+- ++....| |.+.
T Consensus 27 ~~~l~k~ka~G~n~v~~yv~W-~~he~~~-g~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi---~aE~~~g---G~P~ 98 (319)
T PF01301_consen 27 RDRLQKMKAAGLNTVSTYVPW-NLHEPEE-GQFDFTGNRDLDRFLDLAQENGLYVILRPGPYI---CAEWDNG---GLPA 98 (319)
T ss_dssp HHHHHHHHHTT-SEEEEE--H-HHHSSBT-TB---SGGG-HHHHHHHHHHTT-EEEEEEES------TTBGGG---G--G
T ss_pred HHHHHHHHhCCcceEEEeccc-cccCCCC-CcccccchhhHHHHHHHHHHcCcEEEeccccee---cccccch---hhhh
Confidence 899999999999999999987 4666665 467766778899999999999999998643221 1111111 2333
Q ss_pred Cc------------hhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 145 WG------------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 145 w~------------~~~~~~~~~~~~~la~~y~~-----~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
|. +...+...++++.|.+..+. --.|++.++=||... ...-+.+++.+.++.|+.....
T Consensus 99 Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~----~~~~~~Y~~~l~~~~~~~g~~~ 174 (319)
T PF01301_consen 99 WLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGS----YGTDRAYMEALKDAYRDWGIDP 174 (319)
T ss_dssp GGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGC----TSS-HHHHHHHHHHHHHTT-SS
T ss_pred hhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCC----CcccHhHHHHHHHHHHHhhCcc
Confidence 42 34455555666665554332 235888999999873 2234677778888888888875
Q ss_pred eEEEe
Q 019395 208 YVIMS 212 (341)
Q Consensus 208 ~v~~~ 212 (341)
++...
T Consensus 175 ~~~~t 179 (319)
T PF01301_consen 175 VLLYT 179 (319)
T ss_dssp SBEEE
T ss_pred ceeec
Confidence 55554
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.52 E-value=7.1e-06 Score=68.58 Aligned_cols=139 Identities=22% Similarity=0.274 Sum_probs=96.6
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcc-ccc-ccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVG-WWI-ANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG 132 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~-~~~-~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~ 132 (341)
..| +++|+.|++.|+++|=|-.. +.. ...|... ..+....-+-|+.+++.|.++||+|+|.|...+....
T Consensus 20 ~~W-----~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~~w~- 93 (166)
T PF14488_consen 20 AQW-----REEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPDYWD- 93 (166)
T ss_pred HHH-----HHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCchhhh-
Confidence 567 99999999999999966421 110 0011110 1122235678999999999999999999987642211
Q ss_pred CCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 133 NEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 133 ~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
. ....| ..+.-..+.+.+.++|+.++.+.||=|-.|+... + ..-....+.+.+.++++.|+.+|+|+
T Consensus 94 ---~----~~~~~---~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~--~-~~~~~~~~~l~~~lk~~s~~~Pv~IS 160 (166)
T PF14488_consen 94 ---Q----GDLDW---EAERNKQVADELWQRYGHHPSFYGWYIPYEIDDY--N-WNAPERFALLGKYLKQISPGKPVMIS 160 (166)
T ss_pred ---c----cCHHH---HHHHHHHHHHHHHHHHcCCCCCceEEEecccCCc--c-cchHHHHHHHHHHHHHhCCCCCeEEe
Confidence 0 11112 3334456888999999999999999999999852 2 33466677788888888899999988
Q ss_pred CC
Q 019395 213 NR 214 (341)
Q Consensus 213 ~~ 214 (341)
+-
T Consensus 161 pf 162 (166)
T PF14488_consen 161 PF 162 (166)
T ss_pred cC
Confidence 53
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.4e-05 Score=74.20 Aligned_cols=226 Identities=17% Similarity=0.246 Sum_probs=130.9
Q ss_pred HHHHHHHCCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEE---EecCC-CCCCCCCCCCCCCCC
Q 019395 67 DFKFLSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHA-APGSQNGNEHSATRD 140 (341)
Q Consensus 67 d~~~i~~~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi---ldlh~-~~g~~~~~~~~g~~~ 140 (341)
....+-..-||.|=.. +.| ....|.++ .+ .++..|+++++|+++||.|- |=.|. .|.... .
T Consensus 26 ~~~~~~~~~Fn~~t~eN~~Kw-~~~e~~~g-~~---~~~~~D~~~~~a~~~g~~vrGH~LvW~~~~P~w~~-----~--- 92 (320)
T PF00331_consen 26 RYRELFAKHFNSVTPENEMKW-GSIEPEPG-RF---NFESADAILDWARENGIKVRGHTLVWHSQTPDWVF-----N--- 92 (320)
T ss_dssp HHHHHHHHH-SEEEESSTTSH-HHHESBTT-BE---E-HHHHHHHHHHHHTT-EEEEEEEEESSSS-HHHH-----T---
T ss_pred HHHHHHHHhCCeeeeccccch-hhhcCCCC-cc---CccchhHHHHHHHhcCcceeeeeEEEcccccceee-----e---
Confidence 4555555678888764 444 34444443 34 37899999999999999865 33343 121100 0
Q ss_pred CccCCc-h---hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-----ChHHHH-----HHHHHHHHHHHhcCCC
Q 019395 141 GFQEWG-D---SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-----ALDTLK-----SYYKAGYDAVRKYTST 206 (341)
Q Consensus 141 ~~~~w~-~---~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~-----~~~~~~-----~~~~~~~~aIR~~~p~ 206 (341)
...+. . ...+...++++.+++||++...|..||++|||..... ....|. .|...+++..|+.+|+
T Consensus 93 -~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~ 171 (320)
T PF00331_consen 93 -LANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPN 171 (320)
T ss_dssp -STTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred -ccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCC
Confidence 00112 1 2567777999999999998778999999999986321 011222 4889999999999999
Q ss_pred ceEEEeCCCCCCC--hhhhhh-------ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCc
Q 019395 207 AYVIMSNRLGPAD--HKELLS-------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 277 (341)
Q Consensus 207 ~~v~~~~~~~~~~--~~~~~~-------~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 277 (341)
..+++.+-.--.. ...+.+ ...+-+-+-++.|.-.... .+.+.. .+..++.. |.|
T Consensus 172 a~L~~NDy~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~-----------~~~i~~----~l~~~~~~-Gl~ 235 (320)
T PF00331_consen 172 AKLFYNDYNIESPAKRDAYLNLVKDLKARGVPIDGIGLQSHFDAGYP-----------PEQIWN----ALDRFASL-GLP 235 (320)
T ss_dssp SEEEEEESSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEEEEEETTSS-----------HHHHHH----HHHHHHTT-TSE
T ss_pred cEEEeccccccchHHHHHHHHHHHHHHhCCCccceechhhccCCCCC-----------HHHHHH----HHHHHHHc-CCc
Confidence 9999975221111 111221 1234567889999764321 222222 22333333 678
Q ss_pred eEEEeecCCCCCCCC---CHHHHHHHHHHHHHHHcc----CCCcEEEecccc
Q 019395 278 TFVGEWTCEWNVKDA---SKQDYQRFANAQLDVYGR----ATFGWAYWAHKC 322 (341)
Q Consensus 278 v~vGE~g~~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~Gw~~W~~k~ 322 (341)
|.|+|+-........ ..+...+++++.+.++-+ ..-|.++|.+..
T Consensus 236 i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D 287 (320)
T PF00331_consen 236 IHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTD 287 (320)
T ss_dssp EEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBT
T ss_pred eEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCC
Confidence 999999865432221 133344555555555433 357899998864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.9e-06 Score=84.65 Aligned_cols=138 Identities=20% Similarity=0.235 Sum_probs=90.3
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHH-HHHHHHcCCeEEEec-C--CCCCCC-CCC----
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA-FDWAEKYGVKVIVDL-H--AAPGSQ-NGN---- 133 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~-i~~a~~~gi~vildl-h--~~~g~~-~~~---- 133 (341)
+-++|++.||++|+|+||+...-|...+|..+ .|+ +..+|.. ++.|.+.||+|||-- - +.|... +..
T Consensus 31 ~w~ddl~~mk~~G~N~V~ig~faW~~~eP~eG-~fd---f~~~D~~~l~~a~~~Gl~vil~t~P~g~~P~Wl~~~~PeiL 106 (673)
T COG1874 31 TWMDDLRKMKALGLNTVRIGYFAWNLHEPEEG-KFD---FTWLDEIFLERAYKAGLYVILRTGPTGAPPAWLAKKYPEIL 106 (673)
T ss_pred HHHHHHHHHHHhCCCeeEeeeEEeeccCcccc-ccC---cccchHHHHHHHHhcCceEEEecCCCCCCchHHhcCChhhe
Confidence 33999999999999999994434467777654 565 3355555 999999999999965 2 111100 000
Q ss_pred --CCCCCCCCccCC------chhHHHHHHHHHHHHHHH-hCCCCceeEEEeecCCCC----CCCChHHHHHHHHHHHHHH
Q 019395 134 --EHSATRDGFQEW------GDSNVADTVAVIDFLAAR-YANRPSLAAIELINEPLA----PGVALDTLKSYYKAGYDAV 200 (341)
Q Consensus 134 --~~~g~~~~~~~w------~~~~~~~~~~~~~~la~~-y~~~~~v~~~el~NEP~~----~~~~~~~~~~~~~~~~~aI 200 (341)
+..+.......| ++.+.+....+.+.+++| |++.++|++|.+-||=.. .......++.|.++-+..|
T Consensus 107 ~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l 186 (673)
T COG1874 107 AVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSL 186 (673)
T ss_pred EecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHHHHHHHhCcchH
Confidence 001111112222 255677777888999999 999999999999999443 1234456666777766655
Q ss_pred HhcC
Q 019395 201 RKYT 204 (341)
Q Consensus 201 R~~~ 204 (341)
...+
T Consensus 187 ~~ln 190 (673)
T COG1874 187 DNLN 190 (673)
T ss_pred Hhhh
Confidence 5444
|
|
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=98.13 E-value=8.6e-05 Score=66.04 Aligned_cols=130 Identities=18% Similarity=0.250 Sum_probs=79.9
Q ss_pred EEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CCCC------C-hhhhhhccC-CCCcEEEEeeec
Q 019395 173 IELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPA------D-HKELLSFAS-GLSRVVIDVHYY 240 (341)
Q Consensus 173 ~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~~~------~-~~~~~~~~~-~~~~~v~~~H~Y 240 (341)
+..+|||... ..++++..+.+.+.++.+|. +...|+-... +... . +..|+.... ...-.++++|.|
T Consensus 69 ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~l~sPa~~~~~~~~~~g~~Wl~~F~~~~~~~~~~D~iavH~Y 146 (239)
T PF11790_consen 69 LLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVKLGSPAVAFTNGGTPGGLDWLSQFLSACARGCRVDFIAVHWY 146 (239)
T ss_pred eeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcEEECCeecccCCCCCCccHHHHHHHHhcccCCCccEEEEecC
Confidence 4478999974 36777888888888888884 5444433211 1211 1 244555443 456789999999
Q ss_pred CCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHcc-CCCcEEEec
Q 019395 241 NLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR-ATFGWAYWA 319 (341)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gw~~W~ 319 (341)
.. +.....+. +..+.+..++||+|+|||+.......+.+...+|++..+..+++ ..+.-++|-
T Consensus 147 ~~--------~~~~~~~~--------i~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~~~~~~ld~~~~VeryawF 210 (239)
T PF11790_consen 147 GG--------DADDFKDY--------IDDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLRQALPWLDSQPYVERYAWF 210 (239)
T ss_pred Cc--------CHHHHHHH--------HHHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEec
Confidence 21 11111222 22222334578999999986544556778889999999888875 344444554
Q ss_pred c
Q 019395 320 H 320 (341)
Q Consensus 320 ~ 320 (341)
-
T Consensus 211 ~ 211 (239)
T PF11790_consen 211 G 211 (239)
T ss_pred c
Confidence 3
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00058 Score=61.77 Aligned_cols=161 Identities=16% Similarity=0.176 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 179 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP 179 (341)
++.-|.+++.|++|||.+ --|..- .+|...+..+. .+. +...+...+.++.+++||++. +..||++|||
T Consensus 81 Fe~AD~ia~FAr~h~m~l--hGHtLvW~~q~P~W~~~~-----e~~~~~~~~~~e~hI~tV~~rYkg~--~~sWDVVNE~ 151 (345)
T COG3693 81 FEAADAIANFARKHNMPL--HGHTLVWHSQVPDWLFGD-----ELSKEALAKMVEEHIKTVVGRYKGS--VASWDVVNEA 151 (345)
T ss_pred ccchHHHHHHHHHcCCee--ccceeeecccCCchhhcc-----ccChHHHHHHHHHHHHHHHHhccCc--eeEEEecccc
Confidence 788899999999999862 223221 12222222221 022 456777889999999999996 7889999999
Q ss_pred CCCC--CChHHHH------HHHHHHHHHHHhcCCCceEEEeCC-CCCCCh---------hhhhhccCCCCcEEEEeeecC
Q 019395 180 LAPG--VALDTLK------SYYKAGYDAVRKYTSTAYVIMSNR-LGPADH---------KELLSFASGLSRVVIDVHYYN 241 (341)
Q Consensus 180 ~~~~--~~~~~~~------~~~~~~~~aIR~~~p~~~v~~~~~-~~~~~~---------~~~~~~~~~~~~~v~~~H~Y~ 241 (341)
.... ...+.|. .+++.++..-|+.+|+..+++-+- ...... ..+.....+-+.+-++.|+=.
T Consensus 152 vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~NDY~ie~~~~kr~~~~nlI~~LkekG~pIDgiG~QsH~~~ 231 (345)
T COG3693 152 VDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVINDYSIEGNPAKRNYVLNLIEELKEKGAPIDGIGIQSHFSG 231 (345)
T ss_pred cCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeecccccCChHHHHHHHHHHHHHHHCCCCccceeeeeeecC
Confidence 8621 1112222 477888999999999998888752 111111 222222345677889999332
Q ss_pred CCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCC
Q 019395 242 LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286 (341)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~ 286 (341)
-+ ... +.... .+...++. |.+++|+|+=..
T Consensus 232 ~~------~~~----~~~~~----a~~~~~k~-Gl~i~VTELD~~ 261 (345)
T COG3693 232 DG------PSI----EKMRA----ALLKFSKL-GLPIYVTELDMS 261 (345)
T ss_pred CC------CCH----HHHHH----HHHHHhhc-CCCceEEEeeee
Confidence 11 111 11111 22334455 777999998654
|
|
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00068 Score=63.35 Aligned_cols=208 Identities=15% Similarity=0.189 Sum_probs=96.4
Q ss_pred HHHHHHHcCCeEEEecCCCCCC---CCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC-
Q 019395 108 AFDWAEKYGVKVIVDLHAAPGS---QNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP- 182 (341)
Q Consensus 108 ~i~~a~~~gi~vildlh~~~g~---~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~- 182 (341)
+++.|+++|+..++-+-..|.. .|+...++. .+...-.+...+.|++++..++++|+..- .+--++++|||...
T Consensus 109 fL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~~-~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~W 187 (384)
T PF14587_consen 109 FLKAAKERGVNIFEAFSNSPPWWMTKNGSASGGD-DGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWNW 187 (384)
T ss_dssp HHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S--SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-G
T ss_pred HHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCCC-ccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCCC
Confidence 7799999999988765555432 233322221 11111226788999999999999995543 56678899999962
Q ss_pred --------CCChHHHHHHHHHHHHHHHhcCCCceEEEeCC--C----CC--C------Chhhhhhc-----cCCCCcE--
Q 019395 183 --------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--L----GP--A------DHKELLSF-----ASGLSRV-- 233 (341)
Q Consensus 183 --------~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~--~----~~--~------~~~~~~~~-----~~~~~~~-- 233 (341)
..+.++..++++.+..++++.+.+..|++.+. + .. . -...|+.. ..+..+|
T Consensus 188 ~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ff~~~s~~yi~~l~~v~~ 267 (384)
T PF14587_consen 188 AGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGRGNQIEAFFNPDSSTYIGDLPNVPN 267 (384)
T ss_dssp G--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS---HHHHHHSTTSTT--TT-TTEEE
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhhhhhHHhhcCCCchhhhhccccchh
Confidence 13456788999999999999999888888631 1 10 0 01223221 1122333
Q ss_pred EEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC--CCceEEEeecCCCCCC----CCC--HH---HHHHHHH
Q 019395 234 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN--GPLTFVGEWTCEWNVK----DAS--KQ---DYQRFAN 302 (341)
Q Consensus 234 v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pv~vGE~g~~~~~~----~~~--~~---~~~~~~~ 302 (341)
+++-|.|.... +...+..++.. ++...++. +..++.+||+..-+.. +.. .+ ...-|+.
T Consensus 268 ~i~~HsYwt~~-------~~~~l~~~R~~----~~~~~~~~~~~~~~wqtE~~il~~~~~~~~~~g~~~~~~m~~aLy~a 336 (384)
T PF14587_consen 268 IISGHSYWTDS-------PWDDLRDIRKQ----LADKLDKYSPGLKYWQTEYCILGDNYEIIEGGGYDRDLGMDTALYVA 336 (384)
T ss_dssp EEEE--TT-SS-------SHHHHHHHHHH----HHHHHHTTSS--EEEE----S----TTT-SSS-HHHHHHH--HHHHH
T ss_pred heeecccccCC-------CHHHHHHHHHH----HHHHHHhhCcCCceeeeeeeeccCCcccccCCCcccchhHHHHHHHH
Confidence 69999995321 12222233322 22223333 5569999998643211 111 11 1244555
Q ss_pred HHHH--HHccCCCcEEEeccccCCCCCChH
Q 019395 303 AQLD--VYGRATFGWAYWAHKCEANHWSLK 330 (341)
Q Consensus 303 ~~~~--~~~~~~~Gw~~W~~k~~~~~W~~~ 330 (341)
.++. .=..+..+|-+|+-- ..|+|+
T Consensus 337 rviH~DL~~anassW~wW~a~---~~~~yk 363 (384)
T PF14587_consen 337 RVIHNDLTYANASSWQWWTAI---SPYDYK 363 (384)
T ss_dssp HHHHHHHHTS--SEEEEEESE---ESS--S
T ss_pred HHHHhhhhhcccchhHHHHHh---cccccc
Confidence 5542 222366789999753 345554
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00013 Score=74.49 Aligned_cols=144 Identities=15% Similarity=0.146 Sum_probs=97.7
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
+.| ++-|+++|++|+|+|=.=|.| .+.+|.+ +.|+=+....|.++|+.|++.||+|||-.--+ ..+.+..
T Consensus 59 ~~W-----~d~L~k~Ka~GlNtV~tYV~W-n~HEp~~-G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPY---IcAEw~~ 128 (840)
T PLN03059 59 EMW-----PDLIQKAKDGGLDVIQTYVFW-NGHEPSP-GNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPY---ICAEWNF 128 (840)
T ss_pred HHH-----HHHHHHHHHcCCCeEEEEecc-cccCCCC-CeeeccchHHHHHHHHHHHHcCCEEEecCCcc---eeeeecC
Confidence 667 899999999999999998877 5667765 46776778899999999999999999963211 1111211
Q ss_pred CCCCCccCCc------------hhHHHHHHHHHHHHHHHhC-------CCCceeEEEeecCCCCCC-CChHHHHHHHHHH
Q 019395 137 ATRDGFQEWG------------DSNVADTVAVIDFLAARYA-------NRPSLAAIELINEPLAPG-VALDTLKSYYKAG 196 (341)
Q Consensus 137 g~~~~~~~w~------------~~~~~~~~~~~~~la~~y~-------~~~~v~~~el~NEP~~~~-~~~~~~~~~~~~~ 196 (341)
| |.|.|. +.+.+...++++.|+.+.+ +--.|++.++=||=..-. .....=+.|++.+
T Consensus 129 G---GlP~WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l 205 (840)
T PLN03059 129 G---GFPVWLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWA 205 (840)
T ss_pred C---CCchhhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHH
Confidence 2 223331 3455666677777776654 223578899999954210 0001226677777
Q ss_pred HHHHHhcCCCceEEEeC
Q 019395 197 YDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 197 ~~aIR~~~p~~~v~~~~ 213 (341)
.++.++.+-+.+++..+
T Consensus 206 ~~~~~~~Gi~VPl~t~d 222 (840)
T PLN03059 206 ADMAVKLGTGVPWVMCK 222 (840)
T ss_pred HHHHHHcCCCcceEECC
Confidence 77888888888877764
|
|
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=7.6e-05 Score=76.67 Aligned_cols=109 Identities=20% Similarity=0.215 Sum_probs=78.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++|++.||++|+|+||.+ ++ | +++ +..++|.++||.||-+....- +... ..
T Consensus 324 ~~dl~lmk~~n~N~vRts-Hy-----P-----~~~-------~~ydLcDelGllV~~Ea~~~~-------~~~~--~~-- 374 (808)
T COG3250 324 ERDLKLMKEANMNSVRTS-HY-----P-----NSE-------EFYDLCDELGLLVIDEAMIET-------HGMP--DD-- 374 (808)
T ss_pred HHHHHHHHHcCCCEEEec-CC-----C-----CCH-------HHHHHHHHhCcEEEEecchhh-------cCCC--CC--
Confidence 889999999999999986 22 2 222 677999999999999875431 0000 11
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+...+.+..-++++.+|-|++|.|+.|.+.||+..+.. ...++..+++.+|..++..+
T Consensus 375 --~~~~k~~~~~i~~mver~knHPSIiiWs~gNE~~~g~~--------~~~~~~~~k~~d~~r~~~~~ 432 (808)
T COG3250 375 --PEWRKEVSEEVRRMVERDRNHPSIIIWSLGNESGHGSN--------HWALYRWFKASDPTRPVQYE 432 (808)
T ss_pred --cchhHHHHHHHHHHHHhccCCCcEEEEeccccccCccc--------cHHHHHHHhhcCCccceecc
Confidence 24456777788899999999999999999999875221 12345566666776666655
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0074 Score=53.22 Aligned_cols=209 Identities=13% Similarity=0.134 Sum_probs=127.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+.||+.|+..+. .||+ | . . --..|..+...+.+.|++|+|.+.-.+..
T Consensus 66 ~sDLe~l~~~t~-~IR~---Y---~--s--------DCn~le~v~pAa~~~g~kv~lGiw~tdd~--------------- 113 (305)
T COG5309 66 ASDLELLASYTH-SIRT---Y---G--S--------DCNTLENVLPAAEASGFKVFLGIWPTDDI--------------- 113 (305)
T ss_pred HhHHHHhccCCc-eEEE---e---e--c--------cchhhhhhHHHHHhcCceEEEEEeeccch---------------
Confidence 789999999987 8997 2 1 0 12446788899999999999987754311
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 223 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~ 223 (341)
.+...+-...-..-+.+-+.|.++-+-||-... ..+.+++-.+..++-.++.+.+-+.+|.-.+.|.. +.+-
T Consensus 114 -----~~~~~~til~ay~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~dsw~~--~~~n 186 (305)
T COG5309 114 -----HDAVEKTILSAYLPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVDSWNV--VINN 186 (305)
T ss_pred -----hhhHHHHHHHHHhccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeeccccee--eeCC
Confidence 112221222222334566788888899997653 46788999999999999998888777766555532 1111
Q ss_pred hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-----CCCHHHHH
Q 019395 224 LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-----DASKQDYQ 298 (341)
Q Consensus 224 ~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-----~~~~~~~~ 298 (341)
..+....+.++.-.|.| |+. ++..+..........+.+.. ..-..++++|||-|=+.++. -.+.+...
T Consensus 187 p~l~~~SDfia~N~~aY--wd~----~~~a~~~~~f~~~q~e~vqs-a~g~~k~~~v~EtGWPS~G~~~G~a~pS~anq~ 259 (305)
T COG5309 187 PELCQASDFIAANAHAY--WDG----QTVANAAGTFLLEQLERVQS-ACGTKKTVWVTETGWPSDGRTYGSAVPSVANQK 259 (305)
T ss_pred hHHhhhhhhhhcccchh--ccc----cchhhhhhHHHHHHHHHHHH-hcCCCccEEEeeccCCCCCCccCCcCCChhHHH
Confidence 11223346788889999 332 11111111111011111111 11122789999988544321 23456778
Q ss_pred HHHHHHHHHHccCCCcEEEec
Q 019395 299 RFANAQLDVYGRATFGWAYWA 319 (341)
Q Consensus 299 ~~~~~~~~~~~~~~~Gw~~W~ 319 (341)
.++++.+.+++..+...|+-+
T Consensus 260 ~~~~~i~~~~~~~G~d~fvfe 280 (305)
T COG5309 260 IAVQEILNALRSCGYDVFVFE 280 (305)
T ss_pred HHHHHHHhhhhccCccEEEee
Confidence 888888888877666766553
|
|
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0065 Score=59.61 Aligned_cols=231 Identities=19% Similarity=0.190 Sum_probs=118.4
Q ss_pred HHCCCCEEEcCcccccccC------CCCCC----Ccc--cchHHHHHHHHHHHHH--cCCeEEEecCCCCCCC--CCCCC
Q 019395 72 SSNGINAVRIPVGWWIAND------PTPPK----PFV--GGSSKVLDNAFDWAEK--YGVKVIVDLHAAPGSQ--NGNEH 135 (341)
Q Consensus 72 ~~~G~N~VRlpi~~~~~~~------~~~~~----~~~--~~~l~~ld~~i~~a~~--~gi~vildlh~~~g~~--~~~~~ 135 (341)
..+|++.+|+||+=-.+.. +.+.+ .|+ .+..+.+-.+|+.|.+ .+|+++-.....|+.. |+.-.
T Consensus 110 ~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSpWSpP~WMKtn~~~~ 189 (496)
T PF02055_consen 110 DGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASPWSPPAWMKTNGSMN 189 (496)
T ss_dssp TTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEES---GGGBTTSSSC
T ss_pred CCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEecCCCCHHHccCCcCc
Confidence 4589999999996322211 11110 111 0011111234444433 3599999999988753 22111
Q ss_pred -CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC----------CCChHHHHHHHHH-HHHHHHh
Q 019395 136 -SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAVRK 202 (341)
Q Consensus 136 -~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~----------~~~~~~~~~~~~~-~~~aIR~ 202 (341)
.|...+.. .+++.+.+++++....+.|+..- .|+++-+-|||... ..+.++.+.|... +-.++++
T Consensus 190 g~g~l~g~~--~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~ 267 (496)
T PF02055_consen 190 GGGSLKGSL--GDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRK 267 (496)
T ss_dssp SS-BBSCGT--TSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHT
T ss_pred CCCccCCCC--CchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHh
Confidence 12111111 03566777888888888887654 68999999999841 1346678888876 7779999
Q ss_pred cCC--CceEEEeCC-CCC-CCh-hhhhhccCC-CCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCC
Q 019395 203 YTS--TAYVIMSNR-LGP-ADH-KELLSFASG-LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP 276 (341)
Q Consensus 203 ~~p--~~~v~~~~~-~~~-~~~-~~~~~~~~~-~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (341)
.++ +..|++-+. +.. ..+ ...+..+.. .--..+.+|.|..-. ....++.+.. +...+
T Consensus 268 ~~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g~~-------~~~~l~~~h~----------~~P~k 330 (496)
T PF02055_consen 268 AGLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGGDP-------SPQALDQVHN----------KFPDK 330 (496)
T ss_dssp STT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTCS--------HCHHHHHHHH----------HSTTS
T ss_pred cCCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCCCc-------hhhHHHHHHH----------HCCCc
Confidence 877 666666432 111 111 222221111 123679999995410 0122333222 22355
Q ss_pred ceEEEeecCCCCCCC-----CCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 277 LTFVGEWTCEWNVKD-----ASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 277 pv~vGE~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
.++.+|-++...... ..-+.-.+|....+..+.....||..|..-
T Consensus 331 ~l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~gw~~WNl~ 380 (496)
T PF02055_consen 331 FLLFTEACCGSWNWDTSVDLGSWDRAERYAHDIIGDLNNWVSGWIDWNLA 380 (496)
T ss_dssp EEEEEEEESS-STTS-SS-TTHHHHHHHHHHHHHHHHHTTEEEEEEEESE
T ss_pred EEEeeccccCCCCcccccccccHHHHHHHHHHHHHHHHhhceeeeeeeee
Confidence 689999865432111 112333467777777777777899999864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.01 Score=60.06 Aligned_cols=147 Identities=16% Similarity=0.154 Sum_probs=83.7
Q ss_pred HHHHHHHHHCCCCEEEc-Cccccccc-----CCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC--C
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIAN-----DPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--N 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~-----~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--~ 131 (341)
++-++.|+++|+|+|=| ||...... ++......+ =+..+.|+++|+.|+++||+||||+ |..+... .
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~ 239 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGLA 239 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchhh
Confidence 44459999999999999 76421100 000000001 1347899999999999999999997 4332210 0
Q ss_pred CCC------CCC-CCCCccCCc--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee---------cCCCC------
Q 019395 132 GNE------HSA-TRDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI---------NEPLA------ 181 (341)
Q Consensus 132 ~~~------~~g-~~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~~~v~~~el~---------NEP~~------ 181 (341)
.++ +.. .......|. +..++..++.++..++.|+=+ .+- +|.+ +++..
T Consensus 240 ~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iD-G~R-~D~v~~~~~~~~~~~~~~~~~~~~ 317 (613)
T TIGR01515 240 EFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHID-GLR-VDAVASMLYLDYSRDEGEWSPNED 317 (613)
T ss_pred ccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCc-EEE-EcCHHHhhhhcccccccccccccc
Confidence 000 000 000111232 567777888888888887421 111 2221 12210
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 182 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 182 ~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
.+.....-..|.+++.+.||+..|+.+++-+.
T Consensus 318 ~~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~ 349 (613)
T TIGR01515 318 GGRENLEAVDFLRKLNQTVYEAFPGVVTIAEE 349 (613)
T ss_pred CCcCChHHHHHHHHHHHHHHHHCCCeEEEEEe
Confidence 01112345678899999999999998777763
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.054 Score=49.95 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=78.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc---cC-CCCC-CCc--ccchHHHHHHHHHHHHHcCCeEEEecCCCCCC----CCC-
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA---ND-PTPP-KPF--VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS----QNG- 132 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~---~~-~~~~-~~~--~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~----~~~- 132 (341)
++-++.|++.|+|+|=|.|--... .+ ..+. ... .......+.++++.++++|||+|-=+..+... .+.
T Consensus 16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~la~~~pe 95 (316)
T PF13200_consen 16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVLAEAHPE 95 (316)
T ss_pred HHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHHhhhChh
Confidence 778899999999999997742100 00 0000 000 11234679999999999999999755433211 000
Q ss_pred --C-CCCCC---CCCccCCc----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC-------------CCCCChHHH
Q 019395 133 --N-EHSAT---RDGFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELINEPL-------------APGVALDTL 189 (341)
Q Consensus 133 --~-~~~g~---~~~~~~w~----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~-------------~~~~~~~~~ 189 (341)
. ...|. ......|. ++.++..+++.+++|+. +...|. ||=+==|. ......+.+
T Consensus 96 ~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFdEIq-fDYIRFP~~~~~~~l~y~~~~~~~~r~~aI 172 (316)
T PF13200_consen 96 WAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKL--GFDEIQ-FDYIRFPDEGRLSGLDYSENDTEESRVDAI 172 (316)
T ss_pred hEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CCCEEE-eeeeecCCCCcccccccCCCCCcchHHHHH
Confidence 0 00111 00123355 56777778888888872 322332 33222232 111134688
Q ss_pred HHHHHHHHHHHHhcCCC
Q 019395 190 KSYYKAGYDAVRKYTST 206 (341)
Q Consensus 190 ~~~~~~~~~aIR~~~p~ 206 (341)
..|.+.+.+.+++.+-.
T Consensus 173 ~~Fl~~a~~~l~~~~v~ 189 (316)
T PF13200_consen 173 TDFLAYAREELHPYGVP 189 (316)
T ss_pred HHHHHHHHHHHhHcCCC
Confidence 89999999999887654
|
|
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.012 Score=55.97 Aligned_cols=152 Identities=18% Similarity=0.274 Sum_probs=99.9
Q ss_pred HhhccCHHHHHHHHHCCCCEEEcCcc----ccccc---C------------C------------CCCCCcccc----hHH
Q 019395 59 WDSYITDEDFKFLSSNGINAVRIPVG----WWIAN---D------------P------------TPPKPFVGG----SSK 103 (341)
Q Consensus 59 ~~~~~~e~d~~~i~~~G~N~VRlpi~----~~~~~---~------------~------------~~~~~~~~~----~l~ 103 (341)
|..| |..+++|+=.|+|.+=-|.+ |.... . | .-++|+.+. .+-
T Consensus 77 w~qW--eR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~ 154 (666)
T KOG2233|consen 77 WEQW--EREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLL 154 (666)
T ss_pred hHHH--HhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHH
Confidence 4455 99999999999998877743 21100 0 0 012344332 344
Q ss_pred HHHHHHHHHHHcCCeEEEecCCC--C--------CC-------CCCCCCCCCCC-CccCCchhHHHHHHHHHHHHHHHhC
Q 019395 104 VLDNAFDWAEKYGVKVIVDLHAA--P--------GS-------QNGNEHSATRD-GFQEWGDSNVADTVAVIDFLAARYA 165 (341)
Q Consensus 104 ~ld~~i~~a~~~gi~vildlh~~--~--------g~-------~~~~~~~g~~~-~~~~w~~~~~~~~~~~~~~la~~y~ 165 (341)
.=+++|+...+.||.++|--+.. | -+ -|.+...-.+. -.....+-.++---.+++.+.+.|+
T Consensus 155 LqkrIidrm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~~~C~l~v~P~dplF~eIgs~Flr~~~kefG 234 (666)
T KOG2233|consen 155 LQKRIIDRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSRYSCMLLVSPFDPLFQEIGSTFLRHQIKEFG 234 (666)
T ss_pred HHHHHHHHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcceeeeEEccCCcchHHHHHHHHHHHHHHHhC
Confidence 45679999999999999854321 1 11 11111100000 0000113456666789999999999
Q ss_pred CCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 166 NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 166 ~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+..++.+-|.+||-..+...++-+++...+++++.+++|++.+=++.
T Consensus 235 ~~tniy~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQ 281 (666)
T KOG2233|consen 235 GVTNIYSADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQ 281 (666)
T ss_pred CcccccccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeee
Confidence 98899999999998766667788999999999999999999765554
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.012 Score=56.66 Aligned_cols=136 Identities=16% Similarity=0.278 Sum_probs=88.8
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNE 134 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~~~~ 134 (341)
++++.. +..|+.||.+|+.-|=+++ ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|.-.+
T Consensus 114 ~~~~al--~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGGNvGd-- 185 (531)
T PLN02161 114 KRLKAL--TVSLKALKLAGVHGIAVEV-WWGIVERFSPLEFK---WSLYEELFRLISEAGLKLHVALCFHSNMHLFGG-- 185 (531)
T ss_pred CCHHHH--HHHHHHHHHcCCCEEEEEe-eeeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCCCC--
Confidence 344444 8999999999999999999 77777766666775 99999999999999997 67788876432111
Q ss_pred CCCCCCCccCCchhHHHHHHHHHHHHHH----HhCC-----CCceeEEEeecCCCCCCC-ChHHHHHHHHHHHHHHHhcC
Q 019395 135 HSATRDGFQEWGDSNVADTVAVIDFLAA----RYAN-----RPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYT 204 (341)
Q Consensus 135 ~~g~~~~~~~w~~~~~~~~~~~~~~la~----~y~~-----~~~v~~~el~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~ 204 (341)
..+ ..-|.|. ++...+ -|+| ++.-+.+.+-|+|...+. +.+.+.+|++..-+...+--
T Consensus 186 ~~~--IpLP~WV----------~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~ 253 (531)
T PLN02161 186 KGG--ISLPLWI----------REIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYI 253 (531)
T ss_pred ccC--ccCCHHH----------HhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 111 1234442 111111 1333 234566778899987554 34677788877777776654
Q ss_pred CCceEEEe
Q 019395 205 STAYVIMS 212 (341)
Q Consensus 205 p~~~v~~~ 212 (341)
.++++-|.
T Consensus 254 ~~~I~eI~ 261 (531)
T PLN02161 254 GNVIEEIS 261 (531)
T ss_pred cCceEEEE
Confidence 45444443
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.018 Score=55.69 Aligned_cols=130 Identities=17% Similarity=0.385 Sum_probs=85.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCCCCCCCCCCCCc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
++.|+.||++|+.-|=++| ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|.. +. .. ...-
T Consensus 110 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGGNV-GD-~~--~IpL 181 (548)
T PLN02803 110 NASLMALRSAGVEGVMVDA-WWGLVEKDGPMKYN---WEGYAELVQMVQKHGLKLQVVMSFHQCGGNV-GD-SC--SIPL 181 (548)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCC-CC-cc--cccC
Confidence 7899999999999999999 77777766666775 99999999999999997 677888764321 11 11 1123
Q ss_pred cCCchhHHHHHHHHHHHHHH----HhCCC-----CceeEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 143 QEWGDSNVADTVAVIDFLAA----RYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 143 ~~w~~~~~~~~~~~~~~la~----~y~~~-----~~v~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
|.|. ++...+ -|+|+ ..-+.+.+-|+|...+.+ .+.+.+|++..-+....--.++++-|.
T Consensus 182 P~WV----------~e~~~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~I~eI~ 251 (548)
T PLN02803 182 PPWV----------LEEMSKNPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLGGVIAEIQ 251 (548)
T ss_pred CHHH----------HHhhhcCCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhcCceEEEE
Confidence 3342 111111 13332 234557788888875543 466777777777776665445554444
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.081 Score=48.70 Aligned_cols=252 Identities=14% Similarity=0.169 Sum_probs=127.4
Q ss_pred hhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHH-----HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHH
Q 019395 38 GEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-----SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWA 112 (341)
Q Consensus 38 ~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~-----~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a 112 (341)
..-+..++||.-+ +..|--..+.+-++.+= .+||..+|++|.--.+--. +.++ ...++|. .-+-+
T Consensus 42 ~~~Q~IrGFGg~~-----~~Aw~g~lsaa~l~t~Fgng~~~lg~si~Rv~I~~ndfsl~---g~~d-~w~kels-~Ak~~ 111 (433)
T COG5520 42 AKHQVIRGFGGMN-----SSAWAGDLSAAQLETLFGNGANQLGFSILRVPIDSNDFSLG---GSAD-NWYKELS-TAKSA 111 (433)
T ss_pred hhhceeecccccc-----cchhhhhhHHHHHHHHhcCCccccCceEEEEEecccccccC---CCcc-hhhhhcc-cchhh
Confidence 3444556666311 13344444555566552 3789999999953111111 1111 0112221 22337
Q ss_pred HHcCCeEEEecCCCCCCCCC-CCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------C
Q 019395 113 EKYGVKVIVDLHAAPGSQNG-NEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG------V 184 (341)
Q Consensus 113 ~~~gi~vildlh~~~g~~~~-~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~~------~ 184 (341)
.++|+.|+-.....|.+.-. +...|...+. -..+-...+++++...+..++++- .+.++.+-|||...+ -
T Consensus 112 in~g~ivfASPWspPa~Mktt~~~ngg~~g~--Lk~e~Ya~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~~w 189 (433)
T COG5520 112 INPGMIVFASPWSPPASMKTTNNRNGGNAGR--LKYEKYADYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTYDWCWW 189 (433)
T ss_pred cCCCcEEEecCCCCchhhhhccCcCCccccc--cchhHhHHHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCCCcccc
Confidence 89999999999888765321 1111111111 112344556667777777777664 677889999999732 1
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCC-CC-hhhhhhccCC-CCcEEEEeeecCCCCccccCccchhhhHHHHh
Q 019395 185 ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-AD-HKELLSFASG-LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN 261 (341)
Q Consensus 185 ~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~-~~-~~~~~~~~~~-~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~ 261 (341)
++++..+|+.+- .+.+..+.-|++.+.++- .+ .+..+..+.. ..-.++.+|.|..-.. +.
T Consensus 190 tpQe~~rF~~qy---l~si~~~~rV~~pes~~~~~~~~dp~lnDp~a~a~~~ilg~H~Ygg~v~-----------~~--- 252 (433)
T COG5520 190 TPQEELRFMRQY---LASINAEMRVIIPESFKDLPNMSDPILNDPKALANMDILGTHLYGGQVS-----------DQ--- 252 (433)
T ss_pred cHHHHHHHHHHh---hhhhccccEEecchhcccccccccccccCHhHhcccceeEeeecccccc-----------cc---
Confidence 334555555443 333444555666554321 11 1111111111 1235899999953110 00
Q ss_pred hhhhhhhhhhcc--CCCceEEEeecCC-CCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 262 QRASDLGAVTTS--NGPLTFVGEWTCE-WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 262 ~~~~~~~~~~~~--~~~pv~vGE~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
...+.+. .++-+|++|-... +++.+.+++...-+........+...-|+.+|.....
T Consensus 253 -----p~~lak~~~~gKdlwmte~y~~esd~~s~dr~~~~~~~hi~~gm~~gg~~ayv~W~i~~~ 312 (433)
T COG5520 253 -----PYPLAKQKPAGKDLWMTECYPPESDPNSADREALHVALHIHIGMTEGGFQAYVWWNIRLD 312 (433)
T ss_pred -----hhhHhhCCCcCCceEEeecccCCCCCCcchHHHHHHHHHHHhhccccCccEEEEEEEeec
Confidence 0011121 2567999997543 4433334444444444444445556778888877643
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.055 Score=55.19 Aligned_cols=147 Identities=16% Similarity=0.150 Sum_probs=80.6
Q ss_pred HHHHHHHHHCCCCEEEc-Ccccccc-----cCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC--C
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIA-----NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--N 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~-----~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--~ 131 (341)
++-++.|+++|+|+|=| ||.-... -++...-..+ =+..+.|+++|+.|+++||+||||+ |..+... .
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~ 253 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDGLA 253 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccccc
Confidence 44469999999999986 4421000 0000000011 1357899999999999999999996 3322110 0
Q ss_pred CCCC-------CCCCCCccCCc--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee-cC------------CCC-C
Q 019395 132 GNEH-------SATRDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI-NE------------PLA-P 182 (341)
Q Consensus 132 ~~~~-------~g~~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~~~v~~~el~-NE------------P~~-~ 182 (341)
.++. .+.......|. +..++..++.++..++.|+=+ .+- +|.. +. |.. .
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iD-G~R-~D~~~~~~~~d~~~~~~~~~~~~~ 331 (633)
T PRK12313 254 YFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLD-GLR-VDAVSNMLYLDYDEEGEWTPNKYG 331 (633)
T ss_pred ccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCc-EEE-EcChhhhhhcccccccCcCCcccC
Confidence 0110 00000111232 567777788888888876321 111 2211 11 110 0
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 183 GVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+.....-..+.+.+.+.||+..|+..++-+.
T Consensus 332 ~~~~~~~~~fl~~~~~~v~~~~p~~~liaE~ 362 (633)
T PRK12313 332 GRENLEAIYFLQKLNEVVYLEHPDVLMIAEE 362 (633)
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 1111134678899999999999997666653
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.049 Score=54.41 Aligned_cols=133 Identities=20% Similarity=0.247 Sum_probs=74.7
Q ss_pred HHHHHHHHCCCCEEEc-Cccc------ccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCCCCC
Q 019395 66 EDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGN 133 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~------~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~~~ 133 (341)
+-++.|+++|+|+|=| ||.- |-. ++......+ -+..+.|+++|+.|+++||+||||+ |..+.+....
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY-~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~ 193 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGWGY-DGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEGNYLP 193 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCCCC-CccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcccccc
Confidence 4489999999999998 3410 100 010000001 1357899999999999999999997 4332211000
Q ss_pred CCCC--CCCCccCC------c-h---hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHH
Q 019395 134 EHSA--TRDGFQEW------G-D---SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVR 201 (341)
Q Consensus 134 ~~~g--~~~~~~~w------~-~---~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR 201 (341)
.... .......| . + ..++..++.++..++.|+= ..+- +|....-.. ..-..+.+++.+++|
T Consensus 194 ~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~i-DGfR-~D~~~~~~~-----~~~~~~l~~~~~~~~ 266 (542)
T TIGR02402 194 RYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHF-DGLR-LDAVHAIAD-----TSAKHILEELAREVH 266 (542)
T ss_pred ccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCC-cEEE-EeCHHHhcc-----ccHHHHHHHHHHHHH
Confidence 0000 00011122 1 3 5667777888888877732 2222 444333221 112467888888899
Q ss_pred hcCCC
Q 019395 202 KYTST 206 (341)
Q Consensus 202 ~~~p~ 206 (341)
++.|+
T Consensus 267 ~~~p~ 271 (542)
T TIGR02402 267 ELAAE 271 (542)
T ss_pred HHCCC
Confidence 98887
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.015 Score=56.51 Aligned_cols=59 Identities=19% Similarity=0.463 Sum_probs=50.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAP 127 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~ 127 (341)
++.|+.||++|+.-|=+++ ||-..+...+..|+ |+.+.++++.+++.||+ ||+.+|...
T Consensus 130 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~p~~Yd---WsgY~~L~~mvr~~GLKlq~VmSFHqCG 190 (573)
T PLN00197 130 KASLQALKSAGVEGIMMDV-WWGLVERESPGVYN---WGGYNELLEMAKRHGLKVQAVMSFHQCG 190 (573)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEecccC
Confidence 7899999999999999999 77777766666775 99999999999999997 677889743
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.024 Score=55.77 Aligned_cols=121 Identities=17% Similarity=0.390 Sum_probs=81.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCCCCCCCCCCCCc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
++.|+.||.+|+.-|=+++ ||-..+...+..|+ |+.+.++++.+++.||+ ||+.+|...|.. +.. ....-
T Consensus 289 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~gP~~Yd---WsgY~~L~~mvr~~GLKlqvVMSFHqCGGNV-GD~---~~IPL 360 (702)
T PLN02905 289 LKQLRILKSINVDGVKVDC-WWGIVEAHAPQEYN---WNGYKRLFQMVRELKLKLQVVMSFHECGGNV-GDD---VCIPL 360 (702)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCC-CCc---ccccC
Confidence 8899999999999999999 77777766666775 99999999999999997 677888764321 111 01223
Q ss_pred cCCchhHHHHHHHHHHHHHH-----HhCCC-----CceeEEEeecCCCCCC-CChHHHHHHHHHHHHHHHhcC
Q 019395 143 QEWGDSNVADTVAVIDFLAA-----RYANR-----PSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYT 204 (341)
Q Consensus 143 ~~w~~~~~~~~~~~~~~la~-----~y~~~-----~~v~~~el~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~ 204 (341)
|.|. ++ +.+ -|+|. +.-+.|-+-|+|...+ ++.+.+..|++..-.....--
T Consensus 361 P~WV----------~e-~g~~nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl 422 (702)
T PLN02905 361 PHWV----------AE-IGRSNPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEFF 422 (702)
T ss_pred CHHH----------HH-hhhcCCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3342 11 111 13332 3345577889997644 455677777777777776643
|
|
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0047 Score=56.83 Aligned_cols=174 Identities=23% Similarity=0.269 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHh-CCCC-ceeEEEeecCC
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARY-ANRP-SLAAIELINEP 179 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y-~~~~-~v~~~el~NEP 179 (341)
.++.|++.+.|.+-|+.+|.+|-...|...... ......|...+.+.++ +| +++. .|.+|||.|||
T Consensus 108 ~~rwd~l~~F~~~tG~~liFgLNAL~g~~~~~~----~~~~g~WnssNA~~Ll--------~Yt~skgy~I~~WELGNEl 175 (319)
T PF03662_consen 108 MSRWDELNNFAQKTGLKLIFGLNALLGRRQLAD----RDWDGSWNSSNAQSLL--------KYTASKGYNIDSWELGNEL 175 (319)
T ss_dssp ----HHHHHHHHHHT-EEEEEE-TTTS-HHHHH----HHHHHHHHHH-TTTEE--------EEEESS-GGG--------H
T ss_pred hhHHHHHHHHHHHhCCEEEEEecccCCCCCCCC----CCcCCCCChHHHHHHH--------HHHHHcCCCcccccccccc
Confidence 578899999999999999999988754210000 0000012111111111 12 1222 46689999999
Q ss_pred CCCC----CChHHHHHHHHHHHHHHHhc---CCCceEEEe-CCCCCCC-hhhhhhccCCCCcEEEEeeecCCCCccccCc
Q 019395 180 LAPG----VALDTLKSYYKAGYDAVRKY---TSTAYVIMS-NRLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGL 250 (341)
Q Consensus 180 ~~~~----~~~~~~~~~~~~~~~aIR~~---~p~~~v~~~-~~~~~~~-~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~ 250 (341)
...+ .+..++.+=+.++-++++++ ....+.+++ +++.... ...|+....+..-.+++.|+|..-...+++.
T Consensus 176 ~g~g~~~~v~a~qyakD~~~Lr~il~~iy~~~~~~P~v~gP~~~~d~~w~~~FL~~~g~~~vD~vT~H~Y~lg~g~d~~l 255 (319)
T PF03662_consen 176 NGSGVGASVSAEQYAKDFIQLRKILNEIYKNALPGPLVVGPGGFFDADWLKEFLKASGPGVVDAVTWHHYNLGSGRDPAL 255 (319)
T ss_dssp HHHSSSTT--HHHHHHHH---HHHHHHHHHH-TT---EEEEEESS-GGGHHHHHHHTTTT--SEEEEEEEEE--TT-TT-
T ss_pred CCCCCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCCeEECCCCCCCHHHHHHHHHhcCCCccCEEEEEecCCCCCchHHH
Confidence 8632 34444443333333333332 122344455 3222122 3455554222235689999995311111111
Q ss_pred c----chhhhHHHHhhhhhhhhhhhcc--CCCceEEEeecCCCC
Q 019395 251 N----VQQNIDYVNNQRASDLGAVTTS--NGPLTFVGEWTCEWN 288 (341)
Q Consensus 251 ~----~~~~~~~~~~~~~~~~~~~~~~--~~~pv~vGE~g~~~~ 288 (341)
. ....++.+..... .+....++ .+.++++||=|.+++
T Consensus 256 ~~~~l~p~~Ld~~~~~~~-~~~~~v~~~~p~~~~WlGEtg~Ay~ 298 (319)
T PF03662_consen 256 IEDFLNPSYLDTLADTFQ-KLQQVVQEYGPGKPVWLGETGSAYN 298 (319)
T ss_dssp HHHHTS--HHHHHHHHHH-HHH-----HHH---EEEEEEEEEST
T ss_pred HHHhcChhhhhHHHHHHH-HHhhhhcccCCCCCeEEeCcccccC
Confidence 0 0112333332221 22222222 346799999998875
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.021 Score=54.94 Aligned_cols=113 Identities=19% Similarity=0.376 Sum_probs=76.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCC-----------
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQN----------- 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~----------- 131 (341)
++.|+.||++|+.-|=+++ ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|...
T Consensus 40 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~IpLP~WV 115 (517)
T PLN02801 40 EKQLKRLKEAGVDGVMVDV-WWGIVESKGPKQYD---WSAYRSLFELVQSFGLKIQAIMSFHQCGGNVGDAVNIPIPQWV 115 (517)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEecccCCCCCCcccccCCHHH
Confidence 7899999999999999999 77777765556775 99999999999999997 6788897433210
Q ss_pred -------C----CCCCCCCCC---------ccCCc-hhHHHHHHHHHHHHHHHhCCC---CceeEEEeecCCCC
Q 019395 132 -------G----NEHSATRDG---------FQEWG-DSNVADTVAVIDFLAARYANR---PSLAAIELINEPLA 181 (341)
Q Consensus 132 -------~----~~~~g~~~~---------~~~w~-~~~~~~~~~~~~~la~~y~~~---~~v~~~el~NEP~~ 181 (341)
. .+.+|.+.. .+.+. +..++.+.++.+.+.+.|++. ..|..+++-=-|.+
T Consensus 116 ~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~~~I~eI~VGlGP~G 189 (517)
T PLN02801 116 RDVGDSDPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEAGVIIDIEVGLGPAG 189 (517)
T ss_pred HHhhccCCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHHHHHHHHHhccCCeeEEEEEcccccc
Confidence 0 011222111 11122 345788888888888877662 35555555544443
|
|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.11 Score=53.89 Aligned_cols=146 Identities=16% Similarity=0.188 Sum_probs=82.1
Q ss_pred HHHHHHHHHCCCCEEEc-Ccccccc-----cCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC--C
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIA-----NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--N 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~-----~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--~ 131 (341)
++-++.|+++|+|+|=| ||.-... -++...-..+ =+..+.|+++|+.|+++||+||||+ |..+... .
T Consensus 269 ~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~ 348 (726)
T PRK05402 269 DQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHGLA 348 (726)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccchh
Confidence 44468999999999987 4421000 0010000011 1357899999999999999999997 4322110 0
Q ss_pred CCC------CCCC-CCCccCC-------c-hhHHHHHHHHHHHHHHHhCCCCceeEEEe-ecCC---------------C
Q 019395 132 GNE------HSAT-RDGFQEW-------G-DSNVADTVAVIDFLAARYANRPSLAAIEL-INEP---------------L 180 (341)
Q Consensus 132 ~~~------~~g~-~~~~~~w-------~-~~~~~~~~~~~~~la~~y~~~~~v~~~el-~NEP---------------~ 180 (341)
.++ +... ....+.| . +..++..++.++..+++|+=+ .+- +|. .+.. .
T Consensus 349 ~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iD-G~R-~D~v~~~~~~~~~~~~g~~~~~~~ 426 (726)
T PRK05402 349 RFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHID-GLR-VDAVASMLYLDYSRKEGEWIPNIY 426 (726)
T ss_pred ccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCc-EEE-ECCHHHhhhccccccccccccccc
Confidence 011 0000 0011223 1 566777778888888776321 111 221 1221 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
. +.....-..+.+.+.+.||+..|+.+++-+.
T Consensus 427 ~-~~~~~~~~~fl~~~~~~~~~~~p~~~liaE~ 458 (726)
T PRK05402 427 G-GRENLEAIDFLRELNAVVHEEFPGALTIAEE 458 (726)
T ss_pred c-CcCCHHHHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 1 1112245678899999999999998777663
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.085 Score=53.49 Aligned_cols=136 Identities=17% Similarity=0.225 Sum_probs=76.5
Q ss_pred HHHHHHHHCCCCEEEc-Cccc--------------ccc-----cCCCC---CCCcc-cchHHHHHHHHHHHHHcCCeEEE
Q 019395 66 EDFKFLSSNGINAVRI-PVGW--------------WIA-----NDPTP---PKPFV-GGSSKVLDNAFDWAEKYGVKVIV 121 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~--------------~~~-----~~~~~---~~~~~-~~~l~~ld~~i~~a~~~gi~vil 121 (341)
+-++.|+++|+|+|=| ||.- |-. +.|.+ .++.. .+..+.++++|+.|+++||+|||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vil 247 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVIM 247 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEEE
Confidence 3489999999999988 4421 111 00000 00000 11368899999999999999999
Q ss_pred ec---CCCCCCCCCCC-----------CCCCCC-----C-ccCC-chhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 019395 122 DL---HAAPGSQNGNE-----------HSATRD-----G-FQEW-GDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180 (341)
Q Consensus 122 dl---h~~~g~~~~~~-----------~~g~~~-----~-~~~w-~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~ 180 (341)
|+ |......+.+. ..|... + .... .+..++..++.++..+++|+ -..+- +|++..-
T Consensus 248 DvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e~~-iDGfR-~D~~~~~- 324 (605)
T TIGR02104 248 DVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKEYN-IDGFR-FDLMGIH- 324 (605)
T ss_pred EEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHHcC-CCEEE-EechhcC-
Confidence 97 44321111110 001000 0 0001 15566777788888888773 23333 5666432
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+ ..+.+++.+++++..|+..++-+
T Consensus 325 ----~----~~~~~~~~~~~~~~~p~~~ligE 348 (605)
T TIGR02104 325 ----D----IETMNEIRKALNKIDPNILLYGE 348 (605)
T ss_pred ----C----HHHHHHHHHHHHhhCCCeEEEEc
Confidence 2 23556777788888897766544
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.022 Score=52.36 Aligned_cols=174 Identities=20% Similarity=0.227 Sum_probs=89.3
Q ss_pred HhhccCHHHHHHHHHCCCCEEEcCcccccc-------------------cCCC------------CCCCccc----chHH
Q 019395 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIA-------------------NDPT------------PPKPFVG----GSSK 103 (341)
Q Consensus 59 ~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~-------------------~~~~------------~~~~~~~----~~l~ 103 (341)
|+.| |+.|++||=.|+|.+=-.++-+.. ..|. -++|+.+ ...+
T Consensus 18 W~rW--EreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~ 95 (333)
T PF05089_consen 18 WERW--EREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAE 95 (333)
T ss_dssp HHHH--HHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHH
T ss_pred HHHH--HHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHH
Confidence 5555 999999999999987665542110 0010 0234432 3455
Q ss_pred HHHHHHHHHHHcCCeEEEecCCC--CCC-------CC----CCCCCCCCCCccCCc----hhHHHHHHHHHHHHHHHhCC
Q 019395 104 VLDNAFDWAEKYGVKVIVDLHAA--PGS-------QN----GNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYAN 166 (341)
Q Consensus 104 ~ld~~i~~a~~~gi~vildlh~~--~g~-------~~----~~~~~g~~~~~~~w~----~~~~~~~~~~~~~la~~y~~ 166 (341)
.=++|++..++.||.+||=-... |.. .+ +.+. |- ..+.|. +-..+-...+.+...+.|+
T Consensus 96 Lq~kIl~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~-~f--~~~~~L~P~dplF~~i~~~F~~~q~~~yG- 171 (333)
T PF05089_consen 96 LQKKILDRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWN-GF--CRPYFLDPTDPLFAEIAKLFYEEQIKLYG- 171 (333)
T ss_dssp HHHHHHHHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EET-TE--E--EEE-SS--HHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcC-CC--CCCceeCCCCchHHHHHHHHHHHHHHhcC-
Confidence 55679999999999999833211 110 00 0000 10 011122 3345556678888888897
Q ss_pred CCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC------C-CCCCChhhhhhccCCCCcEEEEee
Q 019395 167 RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN------R-LGPADHKELLSFASGLSRVVIDVH 238 (341)
Q Consensus 167 ~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~------~-~~~~~~~~~~~~~~~~~~~v~~~H 238 (341)
..++.+.|++||-..+....+.+....+++++++++.||+.+=++.+ . |...-...++.-.+.+.-+|+|..
T Consensus 172 ~~~~Y~~D~FnE~~p~~~~~~~l~~~s~~v~~am~~~dp~AvWvmQgWlF~~~~fW~~~~~~a~L~~Vp~~~mliLDL~ 250 (333)
T PF05089_consen 172 TDHIYAADPFNEGGPPSGDPEYLANVSKAVYKAMQAADPDAVWVMQGWLFYYDPFWTPNPIKALLSGVPKGRMLILDLF 250 (333)
T ss_dssp --SEEE--TTTTS---TTS---HHHHHHHHHHHHHHH-TT-EEEEEE--------BTTBS-HHHHTT-SGGGEEEEETT
T ss_pred CCceeCCCccCCCCCCCCchHHHHHHHHHHHHHHHhhCCCcEEEEcccccccccccCcchHHHHHcCCCCCCeEEEEcc
Confidence 67899999999977545555679999999999999999986544432 1 332223555554345556777764
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.023 Score=55.73 Aligned_cols=59 Identities=17% Similarity=0.424 Sum_probs=50.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAP 127 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~ 127 (341)
++.|+.||.+|+.-|=++| ||-.++...+..|+ |+.+.++++.+++.||+ ||+.+|...
T Consensus 271 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlqvVmSFHqCG 331 (681)
T PLN02705 271 RQELSHMKSLNVDGVVVDC-WWGIVEGWNPQKYV---WSGYRELFNIIREFKLKLQVVMAFHEYG 331 (681)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeEeecCCCCcCC---cHHHHHHHHHHHHcCCeEEEEEEeeccC
Confidence 7889999999999999999 77777765566775 99999999999999998 677889753
|
|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.011 Score=49.57 Aligned_cols=60 Identities=23% Similarity=0.281 Sum_probs=40.9
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc--------CCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN--------DPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~--------~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+.++.|+++|+|+|-|+=.+.... ++......+ -+..+.++++|+.|+++||+||+|+-
T Consensus 22 ~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 22 IEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred HHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4557799999999999853221111 111111111 13679999999999999999999984
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.11 Score=53.48 Aligned_cols=147 Identities=19% Similarity=0.208 Sum_probs=82.7
Q ss_pred HHHHHHHHHCCCCEEEc-Cccc------ccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEecC---CCCCC---
Q 019395 65 DEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGS--- 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~------~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildlh---~~~g~--- 129 (341)
++-+..|+++|+|+|=| ||.- |-. ++......+ -+..+.|+++|+.|+++||+||||+- .....
T Consensus 254 ~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY-~~~~~fa~~~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~~g 332 (758)
T PLN02447 254 DDVLPRIKALGYNAVQLMAIQEHAYYGSFGY-HVTNFFAVSSRSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTLDG 332 (758)
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCCc-CcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEecccccccccccc
Confidence 56799999999999988 3310 100 000000000 13468899999999999999999973 22211
Q ss_pred CCCCC-------CCCCCCCccCCc--------hhHHHHHHHHHHHHHHHhCCC-------CceeE------EEe---ecC
Q 019395 130 QNGNE-------HSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR-------PSLAA------IEL---INE 178 (341)
Q Consensus 130 ~~~~~-------~~g~~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~-------~~v~~------~el---~NE 178 (341)
.+.++ +.+.......|. +..++..++.++..+++|+=+ ..++- .+. .||
T Consensus 333 l~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~ 412 (758)
T PLN02447 333 LNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNE 412 (758)
T ss_pred ccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCccc
Confidence 01111 111111112232 455666777888888776321 11110 011 133
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 179 P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
-.+ +.....-..|++.+-..|++..|+.++|.++
T Consensus 413 ~~g-~~~d~~a~~fL~~~N~~i~~~~p~~~~IAEd 446 (758)
T PLN02447 413 YFG-MATDVDAVVYLMLANDLLHGLYPEAVTIAED 446 (758)
T ss_pred ccC-CccChHHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 222 2223456778899999999999998877763
|
|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.064 Score=55.01 Aligned_cols=56 Identities=21% Similarity=0.408 Sum_probs=38.6
Q ss_pred HHHHHHHCCCCEEEc-Cccc---------------ccccCCCC----CCCccc-chHHHHHHHHHHHHHcCCeEEEec
Q 019395 67 DFKFLSSNGINAVRI-PVGW---------------WIANDPTP----PKPFVG-GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 67 d~~~i~~~G~N~VRl-pi~~---------------~~~~~~~~----~~~~~~-~~l~~ld~~i~~a~~~gi~vildl 123 (341)
-|+.|+++|+|+|=| ||.- |-. ++.. ...|.. +..+.|+++|+.|+++||+||||+
T Consensus 189 ~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGY-d~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDv 265 (688)
T TIGR02100 189 MIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGY-NTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDV 265 (688)
T ss_pred hhHHHHHcCCCEEEECCcccCCccccccccCCCCccCc-CcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 589999999999988 4421 100 0100 011211 347899999999999999999997
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.12 Score=53.61 Aligned_cols=149 Identities=17% Similarity=0.171 Sum_probs=83.4
Q ss_pred CHHHHHHHHHCCCCEEEc-Cccc------ccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN 131 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRl-pi~~------~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~ 131 (341)
+++-+..|+++|+|+|=| ||.= |-. ++......+ -+..+.|+++|+.|+++||.||||+ |..+...+
T Consensus 419 ~e~~LdYLk~LGvt~IeLmPv~e~~~~~swGY-~~~~yfa~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d~~~ 497 (897)
T PLN02960 419 TQKVLPHVKKAGYNAIQLIGVQEHKDYSSVGY-KVTNFFAVSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMV 497 (897)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCC-CcccCCCcccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCcccc
Confidence 355699999999999998 3320 000 000000000 1347899999999999999999997 43332111
Q ss_pred C---CC-------CCCCCCCccCCc--------hhHHHHHHHHHHHHHHHhCCC----Cce---eEEE--eecCCC----
Q 019395 132 G---NE-------HSATRDGFQEWG--------DSNVADTVAVIDFLAARYANR----PSL---AAIE--LINEPL---- 180 (341)
Q Consensus 132 ~---~~-------~~g~~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~----~~v---~~~e--l~NEP~---- 180 (341)
+ ++ +.+.......|. +..++..++.++...+.|+=+ .+| +-.+ ..+++.
T Consensus 498 ~L~~FDG~~~~Yf~~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~ 577 (897)
T PLN02960 498 GLSLFDGSNDCYFHSGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDE 577 (897)
T ss_pred chhhcCCCccceeecCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcccc
Confidence 1 11 111111112232 556677778888888777421 122 2111 011111
Q ss_pred -CCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 181 -APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 181 -~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
........-..|++.+-.+|++..|+.++|.++
T Consensus 578 ~~n~~~d~~Ai~fL~~lN~~v~~~~P~vilIAEd 611 (897)
T PLN02960 578 YCNQYVDRDALIYLILANEMLHQLHPNIITIAED 611 (897)
T ss_pred cCCccCCchHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 000112356678888888899999998888763
|
|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.019 Score=54.17 Aligned_cols=127 Identities=19% Similarity=0.418 Sum_probs=74.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCCCCCCCCCCCCc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
+..++.||++|+..|=++| ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|.- +.+ + ...-
T Consensus 19 ~~~L~~LK~~GV~GVmvdv-WWGiVE~~~p~~yd---Ws~Y~~l~~~vr~~GLk~~~vmsfH~cGgNv-gD~-~--~IpL 90 (402)
T PF01373_consen 19 EAQLRALKSAGVDGVMVDV-WWGIVEGEGPQQYD---WSGYRELFEMVRDAGLKLQVVMSFHQCGGNV-GDD-C--NIPL 90 (402)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-BSSST-TSS-S--EB-S
T ss_pred HHHHHHHHHcCCcEEEEEe-EeeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEeeecCCCCC-CCc-c--CCcC
Confidence 8899999999999999999 67777766556775 99999999999999998 566778764321 111 0 1122
Q ss_pred cCCchhHHHHHHHHHHHHHH---HhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 143 QEWGDSNVADTVAVIDFLAA---RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 143 ~~w~~~~~~~~~~~~~~la~---~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
|.|. ++...+ -|+|+....--|-+. |...+.+.+.+..|++...+..++-- +.+.-|
T Consensus 91 P~Wv----------~~~~~~~di~ytd~~G~rn~E~lS-p~~~grt~~~Y~dfm~sF~~~f~~~~-~~I~~I 150 (402)
T PF01373_consen 91 PSWV----------WEIGKKDDIFYTDRSGNRNKEYLS-PVLDGRTLQCYSDFMRSFRDNFSDYL-STITEI 150 (402)
T ss_dssp -HHH----------HHHHHHSGGEEE-TTS-EEEEEE--CTBTTBCHHHHHHHHHHHHHHCHHHH-TGEEEE
T ss_pred CHHH----------HhccccCCcEEECCCCCcCcceee-cccCCchHHHHHHHHHHHHHHHHHHH-hhheEE
Confidence 3342 111111 255555443344444 76545446677777777666666554 554444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.17 Score=54.31 Aligned_cols=102 Identities=14% Similarity=0.197 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHcCCeEEEec---CCCCCCC-----CCC----CCCCCC-----CCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-----NGN----EHSATR-----DGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildl---h~~~g~~-----~~~----~~~g~~-----~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
++.|+++|+.|+++||+||||+ |....+. .+. +..|.. .+..... +...+..++.++..++.
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e 633 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE 633 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 6889999999999999999997 4332110 000 000100 0000111 45567777888888888
Q ss_pred hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 164 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
|+= ..+- ||++.. .+. .+++.+..++++++|+.++ ++.+|
T Consensus 634 y~V-DGFR-fDl~g~-----~d~----~~~~~~~~~l~~~dP~~~l-iGE~W 673 (1111)
T TIGR02102 634 FKV-DGFR-FDMMGD-----HDA----ASIEIAYKEAKAINPNIIM-IGEGW 673 (1111)
T ss_pred cCC-cEEE-Eecccc-----CCH----HHHHHHHHHHHHhCcCEEE-EEecc
Confidence 842 3444 777743 122 2455666777888997644 45544
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.13 Score=52.55 Aligned_cols=111 Identities=17% Similarity=0.267 Sum_probs=63.4
Q ss_pred HHHHHHHCCCCEEEc-Cccc---------------ccccCCC----CCCCccc---chHHHHHHHHHHHHHcCCeEEEec
Q 019395 67 DFKFLSSNGINAVRI-PVGW---------------WIANDPT----PPKPFVG---GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 67 d~~~i~~~G~N~VRl-pi~~---------------~~~~~~~----~~~~~~~---~~l~~ld~~i~~a~~~gi~vildl 123 (341)
-++.|+++|+|+|=| ||.- |-. ++. +...|.. ..++.++++|+.|+++||+||||+
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGY-d~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDv 262 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGY-NPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILDV 262 (658)
T ss_pred chHHHHHcCCCEEEecCcccCCCcccccccccccccCc-ccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEE
Confidence 489999999999988 4421 100 000 0011211 246889999999999999999997
Q ss_pred ---CCCCCCCCC-------CCC--------CCC------CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC
Q 019395 124 ---HAAPGSQNG-------NEH--------SAT------RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINE 178 (341)
Q Consensus 124 ---h~~~g~~~~-------~~~--------~g~------~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE 178 (341)
|...+...+ .+. .|. +.....+. +..++..++.++..++.|+= ..+- +|++.+
T Consensus 263 V~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~~~~~~g~g~~ln~~~p~Vr~~iid~l~~W~~e~gV-DGFR-fD~a~~ 340 (658)
T PRK03705 263 VFNHSAELDLDGPTLSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDWAIDCLRYWVETCHV-DGFR-FDLATV 340 (658)
T ss_pred cccCccCcCCCCcchhcccCCCccceEECCCCCcCCCCCccCcccCCCHHHHHHHHHHHHHHHHHhCC-CEEE-EEcHhh
Confidence 443211100 000 000 00111122 56677778888888888732 3443 677666
Q ss_pred CC
Q 019395 179 PL 180 (341)
Q Consensus 179 P~ 180 (341)
-.
T Consensus 341 l~ 342 (658)
T PRK03705 341 LG 342 (658)
T ss_pred hC
Confidence 53
|
|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.2 Score=52.80 Aligned_cols=112 Identities=8% Similarity=0.021 Sum_probs=61.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEec---CCCCCCC----CCCC-----------CCCCCC-----CccCCc-hhHHHHHHHH
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ----NGNE-----------HSATRD-----GFQEWG-DSNVADTVAV 156 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildl---h~~~g~~----~~~~-----------~~g~~~-----~~~~w~-~~~~~~~~~~ 156 (341)
....++++|+.|+++||+||+|+ |....+. +.++ ..|... +...-. +...+..++.
T Consensus 464 RI~efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G~~~ns~c~n~~Ase~~mvrklIlDs 543 (970)
T PLN02877 464 RIIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDD 543 (970)
T ss_pred hHHHHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCCCcccCCccCCCccCCHHHHHHHHHH
Confidence 36789999999999999999996 5432110 1000 011000 000001 3445666788
Q ss_pred HHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 157 IDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 157 ~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
++..++.|+ -...- ||++..-.. .+....+...+++....+.++...+++++.+|.
T Consensus 544 l~yW~~ey~-VDGFR-FDlmg~i~~--~tm~~~~~~L~~i~~~~~~~dg~~i~lyGEgW~ 599 (970)
T PLN02877 544 LLNWAVNYK-VDGFR-FDLMGHLMK--RTMVRAKDALQSLTLERDGVDGSSIYLYGEGWD 599 (970)
T ss_pred HHHHHHHhC-CCEEE-EEccccccH--HHHHHHHHHHHHHhhhhcccCCCceEEEEeCCC
Confidence 899998884 33444 788877542 111222333333333334445455677788775
|
|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.23 Score=53.77 Aligned_cols=145 Identities=21% Similarity=0.258 Sum_probs=82.5
Q ss_pred HHHHHHHHHCCCCEEEc-Ccc------cccccCCCC----CCCcccchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI-PVG------WWIANDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~------~~~~~~~~~----~~~~~~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~ 130 (341)
++-++.|+++|+|+|=| ||. .|-. ++.. ...| +..+.++++|+.|+++||.||||+ |..+...
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~swGY-~~~~y~ap~~ry--Gt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~ 845 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGGSWGY-QVTSYFAPTSRF--GHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSW 845 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCCCCCC-CccccCCcCccc--CCHHHHHHHHHHHHHCCCEEEEEeccccCCcchh
Confidence 45579999999999977 442 1110 1110 0111 357899999999999999999997 3221110
Q ss_pred -----CC---CCCCCC-CCCccCCc--------hhHHHHHHHHHHHHHHHhCCCC----ceeE---EEeec-----CCCC
Q 019395 131 -----NG---NEHSAT-RDGFQEWG--------DSNVADTVAVIDFLAARYANRP----SLAA---IELIN-----EPLA 181 (341)
Q Consensus 131 -----~~---~~~~g~-~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~~----~v~~---~el~N-----EP~~ 181 (341)
.+ +.+... ....+.|. +...+..++.+....++|+=+- .|.. .+--- .|+.
T Consensus 846 ~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~ 925 (1224)
T PRK14705 846 ALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNR 925 (1224)
T ss_pred hhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccc
Confidence 00 111100 01122342 5666777788888888875321 1110 11111 1221
Q ss_pred C-CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 182 P-GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 182 ~-~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
. +.....-..|.+.+...|++..|+.++|-+
T Consensus 926 ~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 926 FGGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred cCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 1 112234567899999999999998877775
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.056 Score=55.00 Aligned_cols=63 Identities=24% Similarity=0.360 Sum_probs=44.5
Q ss_pred CHHHHHHHHHCCCCEEEc-CcccccccCCC------------------CCCCcc-----cchHHHHHHHHHHHHHcCCeE
Q 019395 64 TDEDFKFLSSNGINAVRI-PVGWWIANDPT------------------PPKPFV-----GGSSKVLDNAFDWAEKYGVKV 119 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRl-pi~~~~~~~~~------------------~~~~~~-----~~~l~~ld~~i~~a~~~gi~v 119 (341)
.+..|+.||++|+++|.| ||..+...... +.+.|. .+.+..++.+|+.++++||.|
T Consensus 202 ~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaGI~V 281 (697)
T COG1523 202 EPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKAGIEV 281 (697)
T ss_pred cccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHcCCEE
Confidence 355699999999999998 66433221100 011222 235889999999999999999
Q ss_pred EEec---CCC
Q 019395 120 IVDL---HAA 126 (341)
Q Consensus 120 ildl---h~~ 126 (341)
|||+ |.+
T Consensus 282 ILDVVfNHTa 291 (697)
T COG1523 282 ILDVVFNHTA 291 (697)
T ss_pred EEEEeccCcc
Confidence 9997 664
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.26 Score=49.96 Aligned_cols=59 Identities=15% Similarity=0.182 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccccc---CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIAN---DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~---~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|. |.-.... +.......++ +..+.|+++|+.|+++||+||||+
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~ 246 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDG 246 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 456899999999999983 3210000 0000011111 357899999999999999999998
|
|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.41 Score=49.15 Aligned_cols=145 Identities=14% Similarity=0.182 Sum_probs=82.0
Q ss_pred HHHHHHHHHCCCCEEEc-Ccc------cccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC--
Q 019395 65 DEDFKFLSSNGINAVRI-PVG------WWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ-- 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~------~~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~-- 130 (341)
++-+..|+++|+|+|=| ||. .|-. ++......+ -+..+.++++|+.|+++||+||||+ |..+...
T Consensus 273 ~~ll~ylk~LGvt~I~LmPi~e~~~~~~wGY-~~~~~~a~~~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~l 351 (730)
T PRK12568 273 EQLIPYVQQLGFTHIELLPITEHPFGGSWGY-QPLGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAHGL 351 (730)
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCC-CCCcCCccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcccccc
Confidence 56689999999999987 441 1111 111000001 1357899999999999999999997 3222110
Q ss_pred CCCC------CCCCC-CCccCCc--------hhHHHHHHHHHHHHHHHhCCCC-------ceeEEE--------eecCCC
Q 019395 131 NGNE------HSATR-DGFQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIE--------LINEPL 180 (341)
Q Consensus 131 ~~~~------~~g~~-~~~~~w~--------~~~~~~~~~~~~~la~~y~~~~-------~v~~~e--------l~NEP~ 180 (341)
..++ +...+ .....|. +..++..++.++...++|.=+- .++..+ +-|+-.
T Consensus 352 ~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~g 431 (730)
T PRK12568 352 AQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHG 431 (730)
T ss_pred ccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccC
Confidence 0111 10000 0112332 5666777788888887763211 111111 112211
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+.....-..|.+++-.+|++..|+..++-+
T Consensus 432 --g~en~ea~~Fl~~ln~~v~~~~P~~~~IAE 461 (730)
T PRK12568 432 --GRENLEAVAFLRQLNREIASQFPGVLTIAE 461 (730)
T ss_pred --CccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 111124567899999999999999887776
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.047 Score=54.16 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=68.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++++++.|+|+|-..|.| ...+|.++ .|+=+..-.|.++|+.|++.||+|+|-+--+ -...++++| -+.
T Consensus 52 ~~~i~k~k~~Gln~IqtYVfW-n~Hep~~g-~y~FsG~~DlvkFikl~~~~GLyv~LRiGPy--IcaEw~~GG----~P~ 123 (649)
T KOG0496|consen 52 PDLIKKAKAGGLNVIQTYVFW-NLHEPSPG-KYDFSGRYDLVKFIKLIHKAGLYVILRIGPY--ICAEWNFGG----LPW 123 (649)
T ss_pred HHHHHHHHhcCCceeeeeeec-ccccCCCC-cccccchhHHHHHHHHHHHCCeEEEecCCCe--EEecccCCC----cch
Confidence 889999999999999999987 56666654 5554455667777999999999999965411 111112222 222
Q ss_pred Cc------------hhHHHHHHHHHHHHHH----HhCCC-CceeEEEeecCCC
Q 019395 145 WG------------DSNVADTVAVIDFLAA----RYANR-PSLAAIELINEPL 180 (341)
Q Consensus 145 w~------------~~~~~~~~~~~~~la~----~y~~~-~~v~~~el~NEP~ 180 (341)
|. +.......++++.|+. -|... --|+.-++=||=.
T Consensus 124 wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 124 WLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYG 176 (649)
T ss_pred hhhhCCceEEecCChHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhh
Confidence 21 2334445555555555 23322 2366689999964
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.093 Score=51.15 Aligned_cols=150 Identities=19% Similarity=0.207 Sum_probs=95.7
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
++-.++-.+++|+|.+|+ | .++.|.+ |.+-+.|.+.||-|.-|+.-..... +..
T Consensus 359 ~~~LL~Sv~e~~MN~lRV----W------GGGvYEs------d~FY~lad~lGilVWQD~MFACAlY---------Pt~- 412 (867)
T KOG2230|consen 359 TEFLLDSVAEVGMNMLRV----W------GGGVYES------DYFYQLADSLGILVWQDMMFACALY---------PTN- 412 (867)
T ss_pred HHHHHHHHHHhCcceEEE----e------cCccccc------hhHHHHhhhccceehhhhHHHhhcc---------cCc-
Confidence 456677789999999998 2 2334432 4566889999999999987542110 000
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC-------------CCCChHHHHHHHHHHHH-HHHhcCCCceE
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA-------------PGVALDTLKSYYKAGYD-AVRKYTSTAYV 209 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~-------------~~~~~~~~~~~~~~~~~-aIR~~~p~~~v 209 (341)
++..+-..+-++.=+.|.+.+|.|+.|.--||-.. .....++..-+|.+.+. .....++.++.
T Consensus 413 ---~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPf 489 (867)
T KOG2230|consen 413 ---DEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPF 489 (867)
T ss_pred ---HHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCc
Confidence 24445555666677789999999998999999653 01223455556666444 44455688888
Q ss_pred EEeCC-CCC-CChhhhhhccCCCCcEEEEeeecCCC
Q 019395 210 IMSNR-LGP-ADHKELLSFASGLSRVVIDVHYYNLF 243 (341)
Q Consensus 210 ~~~~~-~~~-~~~~~~~~~~~~~~~~v~~~H~Y~~~ 243 (341)
+++++ .|. +..+.+... .+.+|..-|+|+|..+
T Consensus 490 i~SSPsNG~ete~e~~VS~-NP~dn~~GDVHfYdy~ 524 (867)
T KOG2230|consen 490 IVSSPSNGKETEPENYVSS-NPQDNQNGDVHFYDYT 524 (867)
T ss_pred eecCCCCCcccCccccccC-CCccccCCceEeeehh
Confidence 87743 221 223344333 4567778899999643
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.18 Score=40.39 Aligned_cols=104 Identities=15% Similarity=0.216 Sum_probs=60.8
Q ss_pred HHHHHHHHHCCCCEEEcCcc---cccccCC--CCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC-C--------CCC-
Q 019395 65 DEDFKFLSSNGINAVRIPVG---WWIANDP--TPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-A--------PGS- 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~---~~~~~~~--~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~-~--------~g~- 129 (341)
++-++.+++.|+|+|-+... -+.+-+. .+..|... -+.|.++|+.|++.||+|++-+-. . |..
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~--~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HPeW~ 80 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLK--RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHPEWF 80 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCC--cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCCcee
Confidence 56678899999999999432 1122111 11123322 588999999999999999974321 1 110
Q ss_pred ---CCCCCCCCCCCCccCCc-----hhHHHHHHHHHHHHHHHhCCCCcee
Q 019395 130 ---QNGNEHSATRDGFQEWG-----DSNVADTVAVIDFLAARYANRPSLA 171 (341)
Q Consensus 130 ---~~~~~~~g~~~~~~~w~-----~~~~~~~~~~~~~la~~y~~~~~v~ 171 (341)
.+|....+.....+.|. ..+.+...+.++++.++| +-..|+
T Consensus 81 ~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y-~~DGiF 129 (132)
T PF14871_consen 81 VRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY-DVDGIF 129 (132)
T ss_pred eECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC-CCCEEE
Confidence 11111111111222243 456788889999999999 444554
|
|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.15 Score=55.74 Aligned_cols=136 Identities=15% Similarity=0.247 Sum_probs=74.1
Q ss_pred HHHHHHHHHCCCCEEEc-Cccccccc--------------CCC----CCCCcccchHHHHHHHHHHHHHcCCeEEEec--
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIAN--------------DPT----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL-- 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~--------------~~~----~~~~~~~~~l~~ld~~i~~a~~~gi~vildl-- 123 (341)
++.++.|+++|+|+|=| ||.-..-. ++. +...|.....+.++++|+.|+++||+||||+
T Consensus 190 ~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDvV~ 269 (1221)
T PRK14510 190 PEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDVVF 269 (1221)
T ss_pred chhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46688999999999987 44211000 000 0011211267899999999999999999997
Q ss_pred -CCCCCCCC-------CCCCC-------CC---------CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC
Q 019395 124 -HAAPGSQN-------GNEHS-------AT---------RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINE 178 (341)
Q Consensus 124 -h~~~g~~~-------~~~~~-------g~---------~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE 178 (341)
|...+... +.+.+ +. +...+... +...+..++.++..++ | +-+.+- +|+..+
T Consensus 270 NHt~~~~~~~p~~~~~~~d~~~yy~~~~~~~~~y~~~~G~gn~~n~~~p~v~~~i~d~lr~Wv~-~-gVDGfR-fDla~~ 346 (1221)
T PRK14510 270 NHTGESNHYGPTLSAYGSDNSPYYRLEPGNPKEYENWWGCGNLPNLERPFILRLPMDVLRSWAK-R-GVDGFR-LDLADE 346 (1221)
T ss_pred ccccCCCCCCCcccccCCCCCCceEecCCCCCcccCCCCCCCccccCCHHHHHHHHHHHHHHHH-h-CCCEEE-Eechhh
Confidence 44332110 00000 00 00011111 4455556677777777 5 334444 666665
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcCCCceE
Q 019395 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 179 P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
-.. .+ ..+.+.....++++.|+.++
T Consensus 347 l~r--~~----~~f~~~~~~~l~ai~~d~~l 371 (1221)
T PRK14510 347 LAR--EP----DGFIDEFRQFLKAMDQDPVL 371 (1221)
T ss_pred hcc--Cc----cchHHHHHHHHHHhCCCcCc
Confidence 531 01 13455666677777776544
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.018 Score=52.55 Aligned_cols=59 Identities=25% Similarity=0.348 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|-|+=-+..-....+..+ .++ +..+.++++|+.|+++||+||+|+
T Consensus 7 ~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 7 IDKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HHTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 45588999999999999532210000000011 111 468999999999999999999997
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.7 Score=47.11 Aligned_cols=147 Identities=14% Similarity=0.129 Sum_probs=80.6
Q ss_pred HHHHHHHHHCCCCEEEc-Cccc------ccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCC--C
Q 019395 65 DEDFKFLSSNGINAVRI-PVGW------WIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS--Q 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~------~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~--~ 130 (341)
++-++.|+++|+|+|=| |+.- |-. ++...-..+ -+..+.++++|+.|+++||+||||+ |..+.. .
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~~wGY-~~~~~~~~~~~~g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~~l 249 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDGSWGY-QVTGYYAPTSRLGTPEDFKYLVNHLHGLGIGVILDWVPGHFPTDESGL 249 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCCCCCc-CcccccccccccCCHHHHHHHHHHHHHCCCEEEEEecccccCcchhhh
Confidence 44468899999999988 3310 100 000000000 1357899999999999999999997 332211 0
Q ss_pred CCCC------CCCCCCC-ccCCc--------hhHHHHHHHHHHHHHHHhCCCC-------ceeEEEeec---CCCC-CCC
Q 019395 131 NGNE------HSATRDG-FQEWG--------DSNVADTVAVIDFLAARYANRP-------SLAAIELIN---EPLA-PGV 184 (341)
Q Consensus 131 ~~~~------~~g~~~~-~~~w~--------~~~~~~~~~~~~~la~~y~~~~-------~v~~~el~N---EP~~-~~~ 184 (341)
..++ +.....+ ...|. +..++..++.++...+.|.=+- .++-.+-.- .|+. .+.
T Consensus 250 ~~~dg~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~ 329 (639)
T PRK14706 250 AHFDGGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGR 329 (639)
T ss_pred hccCCCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCc
Confidence 0011 0000001 11232 5667777788888887774211 111011000 1111 012
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 185 ALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 185 ~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
....-..+.+.+-.+||+..|+.++|.+
T Consensus 330 ~n~~a~~fl~~ln~~v~~~~p~~~~iAE 357 (639)
T PRK14706 330 ENLEAIAFLKRLNEVTHHMAPGCMMIAE 357 (639)
T ss_pred ccHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 2345667888999999999999877765
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.34 Score=44.88 Aligned_cols=147 Identities=20% Similarity=0.194 Sum_probs=85.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc-cCCCC---------CCCcccchHHHHHHHHHHHHHcCCeEEEec----CCCCCC-
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA-NDPTP---------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGS- 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~-~~~~~---------~~~~~~~~l~~ld~~i~~a~~~gi~vildl----h~~~g~- 129 (341)
++-++.|+++|||+|=+.+..... +=+.. +.+.....++-|..+|+.|+++||.|.-=+ -..+.+
T Consensus 22 ~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~~ 101 (311)
T PF02638_consen 22 DEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVSH 101 (311)
T ss_pred HHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCCCchhh
Confidence 677889999999999886643110 00111 011112258899999999999999976322 100000
Q ss_pred ---CCCC----CCCCCC------CCccCCc----hhHHHHHHHHHHHHHHHhCCCCceeEEE--ee-------cCC----
Q 019395 130 ---QNGN----EHSATR------DGFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIE--LI-------NEP---- 179 (341)
Q Consensus 130 ---~~~~----~~~g~~------~~~~~w~----~~~~~~~~~~~~~la~~y~~~~~v~~~e--l~-------NEP---- 179 (341)
.+.. .+.|.. .+...|. |+.++..++.++.|+++|. -..|. +| .. +.+
T Consensus 102 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lDdy~yp~~~~g~~~~~~~~ 179 (311)
T PF02638_consen 102 ILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LDDYFYPPPSFGYDFPDVAA 179 (311)
T ss_pred hhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ecccccccccCCCCCccHHH
Confidence 0000 011100 0122233 7889999999999999994 33332 33 10 011
Q ss_pred ---------CCCCCC-------hHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 180 ---------LAPGVA-------LDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 180 ---------~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
.....+ .+.+..+.++++++|+++.|+..+.++.
T Consensus 180 y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp 229 (311)
T PF02638_consen 180 YEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISP 229 (311)
T ss_pred HHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 000011 2456678999999999999998888863
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.36 Score=50.77 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEec---CCCCCCCC---CCC-----------CCCCCC-----CccCC-chhHHHHHHHHH
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN---GNE-----------HSATRD-----GFQEW-GDSNVADTVAVI 157 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~---~~~-----------~~g~~~-----~~~~w-~~~~~~~~~~~~ 157 (341)
.+..++++|+.|+++||+||+|+ |...+... .++ ..|... +...- .+...+..++.+
T Consensus 402 Ri~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl 481 (898)
T TIGR02103 402 RIKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSL 481 (898)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHH
Confidence 47889999999999999999997 54432110 000 001100 00001 145567777888
Q ss_pred HHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 158 DFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 158 ~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
+..++.|+ -..+- ||++..-. ..+++++.+++|+++|+. ++++.+|.
T Consensus 482 ~~W~~ey~-VDGFR-fDlm~~~~---------~~f~~~~~~~l~~i~pdi-~l~GEgW~ 528 (898)
T TIGR02103 482 VVWAKDYK-VDGFR-FDLMGHHP---------KAQMLAAREAIKALTPEI-YFYGEGWD 528 (898)
T ss_pred HHHHHHcC-CCEEE-EechhhCC---------HHHHHHHHHHHHHhCCCE-EEEecCCC
Confidence 88888884 23444 77876542 235566677888889975 55676775
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.43 Score=44.89 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=77.6
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccc--cCCCCCCCcc----cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIA--NDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA 137 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~--~~~~~~~~~~----~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g 137 (341)
+++-++.+|++|++-|=|--..-.. +=|+...+++ ...-+.+.++++.|+++||++-+-++...-.........
T Consensus 93 ~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~dw~~~~~~~~~ 172 (346)
T PF01120_consen 93 ADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWDWHHPDYPPDE 172 (346)
T ss_dssp HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSSCCCTTTTSSC
T ss_pred HHHHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchHhcCcccCCCc
Confidence 3677888899999999884321000 0022212232 124688999999999999999997776521111100000
Q ss_pred C--CC----CccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEE
Q 019395 138 T--RD----GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 138 ~--~~----~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~ 210 (341)
. .. ....|.....+.+..-+++|.++| .+.++=||...... .+.+.. .+.++.||+..|+.+|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~-----~~~~~~--~~~~~~i~~~qp~~ii~ 242 (346)
T PF01120_consen 173 EGDENGPADGPGNWQRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP-----DEDWDS--AELYNWIRKLQPDVIIN 242 (346)
T ss_dssp HCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----CTHHHH--HHHHHHHHHHSTTSEEE
T ss_pred cCCcccccccchhhHhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----ccccCH--HHHHHHHHHhCCeEEEe
Confidence 0 00 001111122336678888999999 45554488777642 123322 88899999999977654
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.88 Score=45.83 Aligned_cols=143 Identities=17% Similarity=0.195 Sum_probs=80.3
Q ss_pred CHHHHHHHHHCCCCEEEc-Ccccccc-----cCCCCCCCccc----chHHHHHHHHHHHHHcCCeEEEec---CCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRI-PVGWWIA-----NDPTPPKPFVG----GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 130 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRl-pi~~~~~-----~~~~~~~~~~~----~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~ 130 (341)
+++-+.+|+++|+++|=| ||.=..+ -++ ...|.. +.=+.|+++|+.|+++||.||||. |-.| ..
T Consensus 167 a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~-d~ 243 (628)
T COG0296 167 AIELLPYLKELGITHIELMPVAEHPGDRSWGYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPP-DG 243 (628)
T ss_pred HHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCC-Cc
Confidence 478888999999999998 4421000 011 011111 346889999999999999999997 3222 11
Q ss_pred CC---CCCC------CCC-CCccCCc--------hhHHHHHHHHHHHHHHHhC---------------CCCceeEEEeec
Q 019395 131 NG---NEHS------ATR-DGFQEWG--------DSNVADTVAVIDFLAARYA---------------NRPSLAAIELIN 177 (341)
Q Consensus 131 ~~---~~~~------g~~-~~~~~w~--------~~~~~~~~~~~~~la~~y~---------------~~~~v~~~el~N 177 (341)
++ ++.+ ..+ .-.+.|. ++....++.-.....++|. +...-.+..+.|
T Consensus 244 ~~L~~fdg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~smly~d~~~~~~~~~~n 323 (628)
T COG0296 244 NYLARFDGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVASMLYLDYSRAEGEWVPN 323 (628)
T ss_pred chhhhcCCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhhhhhccchhhhhhccccc
Confidence 11 1110 000 0133454 2333444444445555543 111112223556
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 178 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 178 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
|... ...-....+.+.+.+.|+...|..+.|-
T Consensus 324 ~~gg--r~n~~a~efl~~~n~~i~~~~pg~~~ia 355 (628)
T COG0296 324 EYGG--RENLEAAEFLRNLNSLIHEEEPGAMTIA 355 (628)
T ss_pred ccCC--cccHHHHHHhhhhhhhhcccCCCceeee
Confidence 6542 3445778889999999999888774433
|
|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.19 Score=48.10 Aligned_cols=64 Identities=20% Similarity=0.390 Sum_probs=44.7
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+|..- .+.++.|+++|+++|=||=.... ..+....+ .++ +..+.|+++|+.|+++||+||+|+
T Consensus 26 ~~w~~i--~~kl~~l~~lG~t~iwl~P~~~~-~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 26 DWWRNL--EGKVPDLAKSGFTSAWLPPPSQS-LAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHH--HHHHHHHHHcCCCEEEeCCCCcC-CCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 466444 67789999999999999643321 11111111 111 357899999999999999999998
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.2 Score=50.40 Aligned_cols=61 Identities=21% Similarity=0.333 Sum_probs=41.7
Q ss_pred cCHHHHHHHHHCCCCEEEc-Ccc----------cc--cccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEec
Q 019395 63 ITDEDFKFLSSNGINAVRI-PVG----------WW--IANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRl-pi~----------~~--~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++++++..||.+|.|+|-| |+. |. .++-|.. +.+-.......++.+|+.|++.||.|+||+
T Consensus 256 FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFapssrYgt~~s~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 256 FTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAPSSRYGTPESPCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeecccccccCCCcccchHHHHHHHHHHhhCCcEEehhh
Confidence 4688899999999999998 221 10 0111210 000012247899999999999999999997
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.15 Score=50.93 Aligned_cols=59 Identities=14% Similarity=0.214 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCC-----CCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPP-----KPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~-----~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|.=-+.......+. ..+++ +..+.|+++|+.|+++||+||+|+
T Consensus 30 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 30 IEKLDYLKKLGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHhHHHHHHcCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 456889999999999884222111100000 01111 367999999999999999999997
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.57 Score=45.00 Aligned_cols=122 Identities=20% Similarity=0.176 Sum_probs=77.1
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g~ 138 (341)
-++++.++.|+++|+|.|-|.+ ..+-+..- ... .....+.+.++++.+++.|+. |-+||- +.||
T Consensus 112 ~lt~e~l~~l~~~GvnrislGv--QS~~d~~L-~~l~R~~~~~~~~~ai~~l~~~G~~~v~~dlI~GlPg---------- 178 (400)
T PRK07379 112 TFDLEQLQGYRSLGVNRVSLGV--QAFQDELL-ALCGRSHRVKDIFAAVDLIHQAGIENFSLDLISGLPH---------- 178 (400)
T ss_pred cCCHHHHHHHHHCCCCEEEEEc--ccCCHHHH-HHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC----------
Confidence 3689999999999999555544 22211100 000 012467788899999999998 778875 4453
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+.+.+.+.++.+.+ + +...|..+.+.-||..+ ..+.+....++..+.+.+++.+=.+
T Consensus 179 ---------qt~e~~~~tl~~~~~-l-~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 247 (400)
T PRK07379 179 ---------QTLEDWQASLEAAIA-L-NPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGYEH 247 (400)
T ss_pred ---------CCHHHHHHHHHHHHc-C-CCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence 223445555555543 2 33466667888888742 1234566678888888888877544
|
|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.22 Score=49.93 Aligned_cols=59 Identities=17% Similarity=0.323 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-----CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-----~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+++|=|+=-+..-. ++......++ +..+.++++|+.|+++||+||+|+
T Consensus 36 ~~~ldyl~~lGv~~i~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~ 101 (551)
T PRK10933 36 TQRLDYLQKLGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDM 101 (551)
T ss_pred HHhhHHHHhCCCCEEEECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4668999999999998732111000 0000001111 357899999999999999999998
|
|
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.95 Score=43.68 Aligned_cols=122 Identities=21% Similarity=0.190 Sum_probs=80.0
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g~ 138 (341)
+.++.+-|+.+++.|+| |++++-+.+-+..-.---.....+....+++.+++.|+. |-+||- +.|+
T Consensus 133 ~~~~~e~~~~l~~~GvN--RiSlGVQsf~~~~lk~lgR~h~~~~~~~a~~~~~~~g~~~in~DLIyglP~---------- 200 (416)
T COG0635 133 GTVEAEKFKALKEAGVN--RISLGVQSFNDEVLKALGRIHDEEEAKEAVELARKAGFTSINIDLIYGLPG---------- 200 (416)
T ss_pred CCCCHHHHHHHHHcCCC--EEEeccccCCHHHHHHhcCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC----------
Confidence 44678999999999999 888876543221000000011346677889999999986 778874 4443
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+-++.+.+ -+-++|..|.|.-||... -.+.+.....++.+...+.+.+=
T Consensus 201 ---------QT~~~~~~~l~~a~~--l~pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy 266 (416)
T COG0635 201 ---------QTLESLKEDLEQALE--LGPDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGY 266 (416)
T ss_pred ---------CCHHHHHHHHHHHHh--CCCCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCC
Confidence 234555666666554 234578779999999962 12334566788888888888776
|
|
| >PRK05628 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.94 Score=43.07 Aligned_cols=123 Identities=20% Similarity=0.119 Sum_probs=76.4
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+|.|-|++. .+ ++.--..+. ....+.+.++++.+++.|+. |.+|+- +.||
T Consensus 104 ~~i~~e~l~~l~~~G~~rvslGvQ--S~-~~~~L~~l~R~~s~~~~~~a~~~l~~~g~~~v~~dli~GlPg--------- 171 (375)
T PRK05628 104 ESTSPEFFAALRAAGFTRVSLGMQ--SA-APHVLAVLDRTHTPGRAVAAAREARAAGFEHVNLDLIYGTPG--------- 171 (375)
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc--cC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeccCCC---------
Confidence 347899999999999997777662 22 110000000 12467788899999999998 889874 4453
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+.++.+.+ ++ -..+..+.+.-||..+ ..+.+.....+..+.+.+++.+-.
T Consensus 172 ----------qt~~~~~~tl~~~~~-l~-~~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G~~ 239 (375)
T PRK05628 172 ----------ESDDDWRASLDAALE-AG-VDHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAGFD 239 (375)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHcCCC
Confidence 234555555665554 22 2345556677777642 123345667777888888877654
Q ss_pred c
Q 019395 207 A 207 (341)
Q Consensus 207 ~ 207 (341)
+
T Consensus 240 ~ 240 (375)
T PRK05628 240 W 240 (375)
T ss_pred e
Confidence 4
|
|
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=93.33 E-value=1.2 Score=42.41 Aligned_cols=123 Identities=18% Similarity=0.178 Sum_probs=77.4
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.++++|+|.|-|.|. .+-+..- ..+. ....+.+.+.++.+++.|+. |-+||- +.||
T Consensus 99 ~~~~~~~l~~l~~~G~nrislGvQ--S~~~~~L-~~l~R~~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPg--------- 166 (370)
T PRK06294 99 ENLSESYIRALALTGINRISIGVQ--TFDDPLL-KLLGRTHSSSKAIDAVQECSEHGFSNLSIDLIYGLPT--------- 166 (370)
T ss_pred CCCCHHHHHHHHHCCCCEEEEccc--cCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC---------
Confidence 346899999999999996666552 2211100 0000 11356788899999999996 888864 3343
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
...+.+.+.++.+.+ + +-+.|..+.+.=||..+ ..+.+....+++.+.+.+.+.+=.
T Consensus 167 ----------qt~~~~~~~l~~~~~-l-~~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~ 234 (370)
T PRK06294 167 ----------QSLSDFIVDLHQAIT-L-PITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQGFT 234 (370)
T ss_pred ----------CCHHHHHHHHHHHHc-c-CCCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcCCC
Confidence 234455556666554 2 23466668888888741 123455677888888888877754
Q ss_pred c
Q 019395 207 A 207 (341)
Q Consensus 207 ~ 207 (341)
+
T Consensus 235 ~ 235 (370)
T PRK06294 235 R 235 (370)
T ss_pred e
Confidence 4
|
|
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=93.11 E-value=2 Score=40.06 Aligned_cols=135 Identities=16% Similarity=0.174 Sum_probs=80.3
Q ss_pred HHHHHHHHHCCCCEEEcCccc-ccccC---CC-----------------------CCCCcccchHHHHHHHHHHHHHcCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGW-WIAND---PT-----------------------PPKPFVGGSSKVLDNAFDWAEKYGV 117 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~-~~~~~---~~-----------------------~~~~~~~~~l~~ld~~i~~a~~~gi 117 (341)
++-++.|+..++|.+-+.+.- |.+.- |. ..+.| ..+.++++|+.|+++||
T Consensus 20 k~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y---T~~di~eiv~yA~~rgI 96 (326)
T cd06564 20 KDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYY---TKEEFKELIAYAKDRGV 96 (326)
T ss_pred HHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcc---cHHHHHHHHHHHHHcCC
Confidence 677888999999999987753 11211 10 01112 46899999999999999
Q ss_pred eEEEecCCCCCCC-----------CCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCC-CCce-eEEEeecCCCCCC
Q 019395 118 KVIVDLHAAPGSQ-----------NGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYAN-RPSL-AAIELINEPLAPG 183 (341)
Q Consensus 118 ~vildlh~~~g~~-----------~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~-~~~v-~~~el~NEP~~~~ 183 (341)
.||..+-. ||.. -.....+...+..... +...+-..++++++++.|.. .+.+ +|= -|.....
T Consensus 97 ~vIPEID~-PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~~HiGg---DE~~~~~ 172 (326)
T cd06564 97 NIIPEIDS-PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDTVHIGA---DEYAGDA 172 (326)
T ss_pred eEeccCCC-cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCEEEecc---ccccccC
Confidence 99986643 2210 0000000001111112 56667777888888888873 2322 222 2322112
Q ss_pred CChHHHHHHHHHHHHHHHhcCCC
Q 019395 184 VALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
...+.+..|.+++.+.|++.+.+
T Consensus 173 ~~~~~~~~f~~~~~~~v~~~gk~ 195 (326)
T cd06564 173 GYAEAFRAYVNDLAKYVKDKGKT 195 (326)
T ss_pred ccHHHHHHHHHHHHHHHHHcCCe
Confidence 34567889999999999988543
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=93.10 E-value=4.3 Score=37.41 Aligned_cols=134 Identities=13% Similarity=0.131 Sum_probs=79.3
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccC---CC------------CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIAND---PT------------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA 126 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~---~~------------~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~ 126 (341)
++-++.|+..++|.+-+.+.- |.+.- |. +.+.| ..+.+.++++.|+++||.||..+-..
T Consensus 19 k~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~y---T~~di~elv~yA~~rgI~viPEiD~P 95 (303)
T cd02742 19 KRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFY---TYAQLKDIIEYAAARGIEVIPEIDMP 95 (303)
T ss_pred HHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeE---CHHHHHHHHHHHHHcCCEEEEeccch
Confidence 677888999999999998762 12211 10 11122 36899999999999999999876432
Q ss_pred CCCC------------CCCCCC--CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHH
Q 019395 127 PGSQ------------NGNEHS--ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKS 191 (341)
Q Consensus 127 ~g~~------------~~~~~~--g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~ 191 (341)
|.. .....+ +...+...-. ++..+-..++++++++.|.+.---+|= -|........+.+..
T Consensus 96 -GH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf~~~~iHiGg---DE~~~~~~~~~l~~~ 171 (303)
T cd02742 96 -GHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAELFPDRYLHIGG---DEAHFKQDRKHLMSQ 171 (303)
T ss_pred -HHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHhCCCCeEEecc---eecCCCCCHHHHHHH
Confidence 210 000000 0000111111 566777778888888888542211332 333221223456788
Q ss_pred HHHHHHHHHHhcCC
Q 019395 192 YYKAGYDAVRKYTS 205 (341)
Q Consensus 192 ~~~~~~~aIR~~~p 205 (341)
|.+++.+.+++.+.
T Consensus 172 f~~~~~~~v~~~g~ 185 (303)
T cd02742 172 FIQRVLDIVKKKGK 185 (303)
T ss_pred HHHHHHHHHHHcCC
Confidence 88999999998874
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.3 Score=48.81 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-----CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-----~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|.=-+..-. ++......++ +..+.++++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~LGv~~i~L~Pi~~~~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 31 TSKLDYLKWLGVDALWLLPFFQSPLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HHhHHHHHHCCCCEEEECCCcCCCCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4458999999999998842111100 0000001122 357999999999999999999997
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=92.86 E-value=1.4 Score=41.91 Aligned_cols=123 Identities=18% Similarity=0.199 Sum_probs=75.0
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.++++|+|.|-|++ ..+-+..- .... ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 95 ~~~t~e~l~~l~~~G~~rvsiGv--qS~~d~~L-~~l~R~~~~~~~~~ai~~l~~~g~~~v~~dli~GlPg--------- 162 (374)
T PRK05799 95 GTFTEEKLKILKSMGVNRLSIGL--QAWQNSLL-KYLGRIHTFEEFLENYKLARKLGFNNINVDLMFGLPN--------- 162 (374)
T ss_pred CcCCHHHHHHHHHcCCCEEEEEC--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC---------
Confidence 34789999999999999555544 32211100 0000 12467788899999999996 667864 3343
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+.++.+.+. + -..+..|.+.-+|..+ ..+.+....+++.+.+.+.+.+=.
T Consensus 163 ----------qt~e~~~~~l~~~~~l-~-~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 230 (374)
T PRK05799 163 ----------QTLEDWKETLEKVVEL-N-PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLKEKGYH 230 (374)
T ss_pred ----------CCHHHHHHHHHHHHhc-C-CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCc
Confidence 2345566666666542 2 2345556677788642 123455667777777888877654
Q ss_pred c
Q 019395 207 A 207 (341)
Q Consensus 207 ~ 207 (341)
+
T Consensus 231 ~ 231 (374)
T PRK05799 231 Q 231 (374)
T ss_pred E
Confidence 4
|
|
| >PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=92.73 E-value=1.1 Score=43.39 Aligned_cols=122 Identities=22% Similarity=0.278 Sum_probs=74.1
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEE-EecC-CCCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI-VDLH-AAPGSQNGNEHSATR 139 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi-ldlh-~~~g~~~~~~~~g~~ 139 (341)
.++++.++.|+++|+|.|-|.+. .+-+..-..--.....+.+.++++.+++.|+.+| +|+- +.|+
T Consensus 138 ~lt~e~l~~l~~~G~~rvslGvQ--S~~~~~L~~l~R~~~~~~~~~ai~~l~~~g~~~i~~dlI~GlP~----------- 204 (430)
T PRK08208 138 TTTAEKLALLAARGVNRLSIGVQ--SFHDSELHALHRPQKRADVHQALEWIRAAGFPILNIDLIYGIPG----------- 204 (430)
T ss_pred cCCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-----------
Confidence 46899999999999997777663 2211100000001246788899999999999854 7754 4443
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 140 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 140 ~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+.++.+.+ . +-+.+-.+.+.=||..+ ....+....+++.+.+.+.+.+=.
T Consensus 205 --------qt~e~~~~~l~~~~~-l-~~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~~~Gy~ 266 (430)
T PRK08208 205 --------QTHASWMESLDQALV-Y-RPEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLLEAGYT 266 (430)
T ss_pred --------CCHHHHHHHHHHHHh-C-CCCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 233455555555543 2 22456556677777642 123356667777777777776643
|
|
| >PRK05904 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=92.59 E-value=1.9 Score=40.63 Aligned_cols=124 Identities=16% Similarity=0.146 Sum_probs=76.5
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.|++.|+|.|=|++ ..+-+..- ..+. ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 99 ~~lt~e~l~~lk~~G~nrisiGv--QS~~d~vL-~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dlI~GlPg--------- 166 (353)
T PRK05904 99 ELITQSQINLLKKNKVNRISLGV--QSMNNNIL-KQLNRTHTIQDSKEAINLLHKNGIYNISCDFLYCLPI--------- 166 (353)
T ss_pred CcCCHHHHHHHHHcCCCEEEEec--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCcEEEEEeecCCC---------
Confidence 45689999999999999666555 22211100 0000 12467788999999999987 778864 4453
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC------CCChHHHHHHHHHHHHHHHhcCCCce
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------GVALDTLKSYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~------~~~~~~~~~~~~~~~~aIR~~~p~~~ 208 (341)
.+.+.+.+.++.+.+ .+ -+.+..+.+.=||..+ ..+.+.-.+.++.+.+.+++.+-.+.
T Consensus 167 ----------qt~e~~~~tl~~~~~-l~-p~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 231 (353)
T PRK05904 167 ----------LKLKDLDEVFNFILK-HK-INHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFNKLNYKRY 231 (353)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHHHcCCcEE
Confidence 234455555555543 22 2355556677677631 12445566777888888888776554
|
|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=92.58 E-value=0.35 Score=47.61 Aligned_cols=59 Identities=27% Similarity=0.257 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc-------cCCCCCC---------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA-------NDPTPPK---------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~-------~~~~~~~---------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+++|=|+=.+... -++.... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~ 101 (479)
T PRK09441 25 AERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADV 101 (479)
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 445899999999999885322111 0011000 1122 368899999999999999999997
|
|
| >PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=92.46 E-value=1.5 Score=41.77 Aligned_cols=123 Identities=22% Similarity=0.233 Sum_probs=74.7
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+|.|-|++. .+ ++.--..+ .....+.+.+.++.+++.|+. |-+|+- +.||
T Consensus 96 ~~l~~e~l~~l~~~G~~rvsiGvq--S~-~~~~l~~l~r~~~~~~~~~~i~~l~~~g~~~v~~dli~GlPg--------- 163 (377)
T PRK08599 96 GDLTKEKLQVLKDSGVNRISLGVQ--TF-NDELLKKIGRTHNEEDVYEAIANAKKAGFDNISIDLIYALPG--------- 163 (377)
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc--cC-CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCcEEEeeecCCCC---------
Confidence 346899999999999996666552 21 11000000 012467888999999999997 567764 4443
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+.++.+.+ + +-+.+..+.+.-+|..+ ..+.+.....++.+.+.+++.+=.
T Consensus 164 ----------qt~~~~~~~l~~~~~-l-~~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~Gy~ 231 (377)
T PRK08599 164 ----------QTIEDFKESLAKALA-L-DIPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEMEAHGFH 231 (377)
T ss_pred ----------CCHHHHHHHHHHHHc-c-CCCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCc
Confidence 223445555555433 2 23356567777788642 123345567778888888877644
Q ss_pred c
Q 019395 207 A 207 (341)
Q Consensus 207 ~ 207 (341)
+
T Consensus 232 ~ 232 (377)
T PRK08599 232 Q 232 (377)
T ss_pred E
Confidence 3
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=92.34 E-value=0.47 Score=45.92 Aligned_cols=58 Identities=19% Similarity=0.200 Sum_probs=41.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCC-----CCccc---chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPP-----KPFVG---GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~-----~~~~~---~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.+..|+++|+++|=||=.+... ..... ..+++ +..+.|+++|+.|+++||+||+|+
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~-s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSV-SEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCC-CCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 677899999999999997332111 11010 01111 357899999999999999999997
|
|
| >COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.22 E-value=2.3 Score=40.28 Aligned_cols=226 Identities=14% Similarity=0.142 Sum_probs=111.6
Q ss_pred HHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE-ecCCCCCCCCCCCCCCCCCCccCCc----
Q 019395 72 SSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV-DLHAAPGSQNGNEHSATRDGFQEWG---- 146 (341)
Q Consensus 72 ~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil-dlh~~~g~~~~~~~~g~~~~~~~w~---- 146 (341)
++.|+|-||-..-|-..+. .. -| -+.++|++++.....|+-.|. +||-- ..++ ..+ .|.
T Consensus 15 ~Ei~v~yi~~~~v~h~~~q-~~--~~---~~t~~d~i~d~~~~~~~~~ie~~l~~~-~l~~-~~~--------~wq~n~~ 78 (428)
T COG3664 15 DEIQVNYIRRHGVWHVNAQ-KL--FY---PFTYIDEIIDTLLDLGLDLIELFLIWN-NLNT-KEH--------QWQLNVD 78 (428)
T ss_pred hhhceeeehhcceeeeeec-cc--cC---ChHHHHHHHHHHHHhccHHHHHhhccc-chhh-hhh--------hcccccC
Confidence 5678888876543321111 11 12 267899999999999954333 33311 1111 111 122
Q ss_pred --hhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhh
Q 019395 147 --DSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 223 (341)
Q Consensus 147 --~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~ 223 (341)
....+...++++.+..+|+-. ...+.++..|||+.. .....+.+.+..++ |+..|...| ++.|.......+
T Consensus 79 ~~~~~~dl~~~fl~h~~~~vg~e~v~kw~f~~~~~pn~~-ad~~eyfk~y~~~a---~~~~p~i~v--g~~w~~e~l~~~ 152 (428)
T COG3664 79 DPKSVFDLIAAFLKHVIRRVGVEFVRKWPFYSPNEPNLL-ADKQEYFKLYDATA---RQRAPSIQV--GGSWNTERLHEF 152 (428)
T ss_pred CcHhHHHHHHHHHHHHHHHhChhheeecceeecCCCCcc-cchHHHHHHHHhhh---hccCcceee--ccccCcHHHhhh
Confidence 135678888999999999743 357889999999974 33344444444443 466674433 333322112333
Q ss_pred hhccCCCCcEEEEeeecCCCCccccCccchhhh---HHHHhhhhhhhhhhhccC--CCceEEEeecCCCCCCCCCH-HHH
Q 019395 224 LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI---DYVNNQRASDLGAVTTSN--GPLTFVGEWTCEWNVKDASK-QDY 297 (341)
Q Consensus 224 ~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~pv~vGE~g~~~~~~~~~~-~~~ 297 (341)
.+. .+.-..+..|.|..-...+...+.+... ...+-...+.+.++.+.. +.|.++.||.....+..... +.+
T Consensus 153 ~k~--~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~~~r~~~d~i~~~~~~~pl~~~~wntlt~~~~~~n~sy~ 230 (428)
T COG3664 153 LKK--ADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLEDLRGLKDLIQHHSLGLPLLLTNWNTLTGPREPTNGSYV 230 (428)
T ss_pred hhc--cCcccceeecccccccccccCCCchhhhhhhhhhhhhHHHHHHHHHHhccCCCcceeecccccCCCccccCceee
Confidence 332 3333456777775422222211111100 001101111122222222 45799999987553322111 122
Q ss_pred H-HHHHHHHHHHccCCCcEEEeccc
Q 019395 298 Q-RFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 298 ~-~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
+ .++..++.-....-.+..||++.
T Consensus 231 raa~i~~~Lr~~g~~v~a~~yW~~s 255 (428)
T COG3664 231 RAAYIMRLLREAGSPVDAFGYWTNS 255 (428)
T ss_pred hHHHHHHHHHhcCChhhhhhhhhcc
Confidence 2 44444443333344566688775
|
|
| >PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=91.92 E-value=1.5 Score=42.97 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=73.5
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+|.|-|.+ ..+ ++.--..+. ....+.+.++++.+++.|+. |-+|+- +.|+
T Consensus 148 ~~lt~e~l~~L~~~G~~rvsiGv--QS~-~~~vl~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlPg--------- 215 (453)
T PRK13347 148 RTVTAEMLQALAALGFNRASFGV--QDF-DPQVQKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLPH--------- 215 (453)
T ss_pred ccCCHHHHHHHHHcCCCEEEECC--CCC-CHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCCC---------
Confidence 34789999999999999666655 222 110000000 12467888999999999996 778864 4453
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+.++.+.+ + +-..|..+.+...|... -.+.+.....++.+.+.+.+.+=
T Consensus 216 ----------qt~e~~~~tl~~~~~-l-~p~~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy 281 (453)
T PRK13347 216 ----------QTVESFRETLDKVIA-L-SPDRIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLLAAGY 281 (453)
T ss_pred ----------CCHHHHHHHHHHHHh-c-CCCEEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHHHCCC
Confidence 234556666666654 2 22244445555555421 12345666778888888887764
|
|
| >PRK09058 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=91.87 E-value=2.6 Score=41.18 Aligned_cols=122 Identities=15% Similarity=0.062 Sum_probs=77.6
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcC-CeEEEecC-CCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYG-VKVIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~g-i~vildlh-~~~g~~~~~~~~g~ 138 (341)
.++++.++.++++|+|.|-|.|- .+-+..- ... .....+.+.+.++.+++.| +.|.+||- +.||
T Consensus 160 ~~t~e~l~~l~~aGvnRiSiGVQ--Sf~d~vL-k~lgR~~~~~~~~~~i~~l~~~g~~~v~~DlI~GlPg---------- 226 (449)
T PRK09058 160 GFDDEKADAALDAGANRFSIGVQ--SFNTQVR-RRAGRKDDREEVLARLEELVARDRAAVVCDLIFGLPG---------- 226 (449)
T ss_pred cCCHHHHHHHHHcCCCEEEecCC--cCCHHHH-HHhCCCCCHHHHHHHHHHHHhCCCCcEEEEEEeeCCC----------
Confidence 46899999999999997766652 2211000 000 0113567778999999999 78999985 4453
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CC-ChHHHHHHHHHHHHHHHhcCCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GV-ALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~-~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+-++.+.+ + +-..|..|.|.-||..+ .. +.+....+++.+.+.+++.+=.
T Consensus 227 ---------qT~e~~~~~l~~~~~-l-~~~~is~y~L~~~pgT~l~~~~~~g~l~~~~~~~~~~~my~~~~~~L~~~Gy~ 295 (449)
T PRK09058 227 ---------QTPEIWQQDLAIVRD-L-GLDGVDLYALNLLPGTPLAKAVEKGKLPPPATPAERADMYAYGVEFLAKAGWR 295 (449)
T ss_pred ---------CCHHHHHHHHHHHHh-c-CCCEEEEeccccCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHCCCe
Confidence 223444444555443 2 22456668888888741 11 4567778899999999888765
Q ss_pred c
Q 019395 207 A 207 (341)
Q Consensus 207 ~ 207 (341)
+
T Consensus 296 ~ 296 (449)
T PRK09058 296 Q 296 (449)
T ss_pred E
Confidence 4
|
|
| >cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex) | Back alignment and domain information |
|---|
Probab=91.77 E-value=5.4 Score=37.24 Aligned_cols=131 Identities=14% Similarity=0.159 Sum_probs=77.6
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCC-C---------------CCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPT-P---------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~-~---------------~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++-++.|+..++|.+-+.+.- |.+.-+. | ++.| ..+.++++|+.|+++||.||..+-.
T Consensus 21 k~~id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~~~~~~~~~~~Y---T~~di~elv~yA~~rgI~vIPEiD~ 97 (329)
T cd06568 21 KRYIDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGSTEVGGGPGGYY---TQEDYKDIVAYAAERHITVVPEIDM 97 (329)
T ss_pred HHHHHHHHHhCCcEEEEEeecCCcceeeecCcccccccccccccCCCCCCcC---CHHHHHHHHHHHHHcCCEEEEecCC
Confidence 677888999999999998742 2221110 0 0112 3688999999999999999987642
Q ss_pred CCCCCC-------CCCCCCC--------C--CCccCCc-hhHHHHHHHHHHHHHHHhCCCCce-eEEEeecCCCCCCCCh
Q 019395 126 APGSQN-------GNEHSAT--------R--DGFQEWG-DSNVADTVAVIDFLAARYANRPSL-AAIELINEPLAPGVAL 186 (341)
Q Consensus 126 ~~g~~~-------~~~~~g~--------~--~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v-~~~el~NEP~~~~~~~ 186 (341)
. |... .....+. . .+...-. ++..+-..++++++++-|.+ +.+ +| .-|... ...
T Consensus 98 P-GH~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~f~~-~~iHiG---gDE~~~--~~~ 170 (329)
T cd06568 98 P-GHTNAALAAYPELNCDGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAALTPG-PYIHIG---GDEAHS--TPH 170 (329)
T ss_pred c-HHHHHHHHhChhhccCCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHhCCC-CeEEEe---cccCCC--Cch
Confidence 1 1100 0000000 0 0001111 55666666777888777754 322 22 245442 344
Q ss_pred HHHHHHHHHHHHHHHhcCC
Q 019395 187 DTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 187 ~~~~~~~~~~~~aIR~~~p 205 (341)
+.+..|.+++.+.+++.+.
T Consensus 171 ~~~~~f~~~~~~~v~~~Gk 189 (329)
T cd06568 171 DDYAYFVNRVRAIVAKYGK 189 (329)
T ss_pred HHHHHHHHHHHHHHHHCCC
Confidence 6788899999999998764
|
SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.56 Score=48.07 Aligned_cols=59 Identities=20% Similarity=0.283 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-------------------CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-------------------DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-------------------~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|+=.+.... .+.....+++ +..+.++++|+.|+++||+||+|+
T Consensus 233 ~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 312 (683)
T PRK09505 233 TEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDV 312 (683)
T ss_pred HHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4458999999999998842111100 0000001122 368899999999999999999997
|
|
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=91.67 E-value=8.8 Score=35.30 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=79.6
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc---CCC---CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCC------C
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN---DPT---PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN------G 132 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~---~~~---~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~------~ 132 (341)
++-++.|+..|+|.+-|.+.- .+. .|. ..+.| .-+.++++++.|+++||.||..+-. ||... .
T Consensus 20 k~~id~ma~~k~N~l~lhl~D-~f~~~~~p~~~~~~~~y---T~~ei~ei~~yA~~~gI~vIPeid~-pGH~~~~l~~~~ 94 (301)
T cd06565 20 KKLLRLLALLGANGLLLYYED-TFPYEGEPEVGRMRGAY---TKEEIREIDDYAAELGIEVIPLIQT-LGHLEFILKHPE 94 (301)
T ss_pred HHHHHHHHHcCCCEEEEEEec-ceecCCCcccccCCCCc---CHHHHHHHHHHHHHcCCEEEecCCC-HHHHHHHHhCcc
Confidence 678889999999999987642 110 111 01233 3689999999999999999997654 22100 0
Q ss_pred CCCC---CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCce-eEEEeecCC-CC-------CCCChHHHHHHHHHHHHH
Q 019395 133 NEHS---ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSL-AAIELINEP-LA-------PGVALDTLKSYYKAGYDA 199 (341)
Q Consensus 133 ~~~~---g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v-~~~el~NEP-~~-------~~~~~~~~~~~~~~~~~a 199 (341)
+... ....+...-. ++..+-..++++++++.|.. +.+ +|-|=..+. .. .....+.+..+..++.+.
T Consensus 95 ~~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s-~~~HIG~DE~~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~ 173 (301)
T cd06565 95 FRHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPS-KYIHIGMDEAYDLGRGRSLRKHGNLGRGELYLEHLKKVLKI 173 (301)
T ss_pred cccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCCC-CeEEECCCcccccCCCHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 0000 0000000011 56677777888888888863 222 222211111 11 012235678999999999
Q ss_pred HHhcCCC
Q 019395 200 VRKYTST 206 (341)
Q Consensus 200 IR~~~p~ 206 (341)
+++.+++
T Consensus 174 v~~~g~~ 180 (301)
T cd06565 174 IKKRGPK 180 (301)
T ss_pred HHHcCCE
Confidence 9999983
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK05660 HemN family oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=91.56 E-value=2.1 Score=40.77 Aligned_cols=123 Identities=18% Similarity=0.172 Sum_probs=75.0
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCeE-EEecCC-CCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKV-IVDLHA-APGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~v-ildlh~-~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+|.|-|.| ..+ ++.--... .....+.+.+.++.+++.|+.. -+|+-. .|+
T Consensus 103 ~~l~~e~l~~Lk~~Gv~risiGv--qS~-~~~~L~~l~r~~~~~~~~~ai~~~~~~G~~~v~~dli~Glpg--------- 170 (378)
T PRK05660 103 GTVEADRFVGYQRAGVNRISIGV--QSF-SEEKLKRLGRIHGPDEAKRAAKLAQGLGLRSFNLDLMHGLPD--------- 170 (378)
T ss_pred CcCCHHHHHHHHHcCCCEEEecc--CcC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC---------
Confidence 44689999999999999665554 222 11000000 0124677888999999999975 477753 342
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC------C-CChHHHHHHHHHHHHHHHhcCCCc
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP------G-VALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~------~-~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+.+.+.+.++.+.+ + +-+.+..+.+.=||..+ . .+.+.....++.+.+.+.+.+=.+
T Consensus 171 ----------qt~~~~~~~l~~~~~-l-~p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 235 (378)
T PRK05660 171 ----------QSLEEALDDLRQAIA-L-NPPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQ 235 (378)
T ss_pred ----------CCHHHHHHHHHHHHh-c-CCCeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHHcCCcE
Confidence 234555566666554 2 23456557777777531 1 123455677788888888876544
|
|
| >TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase | Back alignment and domain information |
|---|
Probab=91.53 E-value=2.7 Score=39.66 Aligned_cols=121 Identities=20% Similarity=0.130 Sum_probs=73.1
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecCC-CCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLHA-APGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh~-~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+|.|-|.+. .+ ++.--..+. ....+.+.++++.+++.|+. |-+|+-. .|+
T Consensus 96 ~~lt~e~l~~l~~~Gv~risiGvq--S~-~~~~l~~lgR~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg--------- 163 (360)
T TIGR00539 96 ELITAEWCKGLKGAGINRLSLGVQ--SF-RDDKLLFLGRQHSAKNIAPAIETALKSGIENISLDLMYGLPL--------- 163 (360)
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc--cC-ChHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEeccCCCCC---------
Confidence 347899999999999996666552 22 110000010 12477888999999999996 6788654 342
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+.++.+.+ + +-+.+..+.+.=||..+ ..+.+....++..+.+.+.+.+=
T Consensus 164 ----------qt~~~~~~~l~~~~~-l-~~~~is~y~l~~~~gT~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy 226 (360)
T TIGR00539 164 ----------QTLNSLKEELKLAKE-L-PINHLSAYALSVEPNTNFEKNAKKLPDDDSCAHFDEVVREILEGFGF 226 (360)
T ss_pred ----------CCHHHHHHHHHHHHc-c-CCCEEEeecceEcCCChhhhhhhcCcCHHHHHHHHHHHHHHHHHcCC
Confidence 234455555555554 2 22345556677677642 12334566777777777776553
|
Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo. |
| >PRK06582 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=91.36 E-value=2.4 Score=40.56 Aligned_cols=124 Identities=18% Similarity=0.085 Sum_probs=77.0
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC-CCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGSQNGNEHSATR 139 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh-~~~g~~~~~~~~g~~ 139 (341)
..++++.++.|+++|+|-|-|.| ..+-+..-...-.....+.+.++++.+++.+..|-+||- +.||
T Consensus 107 ~~~~~e~l~~l~~~GvnRiSiGv--QS~~d~~L~~lgR~h~~~~~~~ai~~~~~~~~~v~~DlI~GlPg----------- 173 (390)
T PRK06582 107 TSFETEKFKAFKLAGINRVSIGV--QSLKEDDLKKLGRTHDCMQAIKTIEAANTIFPRVSFDLIYARSG----------- 173 (390)
T ss_pred CcCCHHHHHHHHHCCCCEEEEEC--CcCCHHHHHHcCCCCCHHHHHHHHHHHHHhCCcEEEEeecCCCC-----------
Confidence 34789999999999999555544 222111000000012356677788888888888999975 4443
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 140 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 140 ~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+.+.+.+-++.+++ + +-+.|..+.|.=||..+ ..+.+.....++.+.+.+++.+=.+
T Consensus 174 --------qt~e~~~~~l~~~~~-l-~p~his~y~L~i~~gT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~ 242 (390)
T PRK06582 174 --------QTLKDWQEELKQAMQ-L-ATSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKYFR 242 (390)
T ss_pred --------CCHHHHHHHHHHHHh-c-CCCEEEEecCEEccCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCce
Confidence 223455555555554 2 33567778888888641 1234566788888888888877544
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=91.33 E-value=0.73 Score=47.88 Aligned_cols=58 Identities=26% Similarity=0.232 Sum_probs=41.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-----cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-----VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-----~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++||++|=||=..... .+....++ ++ +..+.|+.+|+.|+++||+||+|+
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~-s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESV-SPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCC-CCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 777999999999999996432111 11111111 11 357899999999999999999997
|
|
| >PRK09057 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=91.27 E-value=2.4 Score=40.43 Aligned_cols=122 Identities=20% Similarity=0.113 Sum_probs=75.2
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCeEEEecC-CCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~vildlh-~~~g~~~~~~~~g~ 138 (341)
..++++.++.|+++|+|.|-|.| ..+-+..- ... .....+.+.++++.+++.++.|-+||- +.||
T Consensus 100 ~~i~~e~L~~l~~~GvnrislGv--QS~~d~vL-~~l~R~~~~~~~~~ai~~~~~~~~~v~~dli~GlPg---------- 166 (380)
T PRK09057 100 TSVEAGRFRGYRAAGVNRVSLGV--QALNDADL-RFLGRLHSVAEALAAIDLAREIFPRVSFDLIYARPG---------- 166 (380)
T ss_pred CcCCHHHHHHHHHcCCCEEEEec--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHhCccEEEEeecCCCC----------
Confidence 34678999999999999666655 22211100 000 011356777888999988999999985 3343
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
...+.+.+-++.+.+ + +-+.|..+.+.-||..+ ..+.+.....++.+.+.+.+.+-.
T Consensus 167 ---------qt~~~~~~~l~~~~~-l-~p~~is~y~L~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~G~~ 234 (380)
T PRK09057 167 ---------QTLAAWRAELKEALS-L-AADHLSLYQLTIEEGTAFYGLHAAGKLILPDEDLAADLYELTQEITAAAGLP 234 (380)
T ss_pred ---------CCHHHHHHHHHHHHh-c-CCCeEEeecceecCCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCc
Confidence 223344444555553 2 33467778888888641 123455667788888888876643
|
|
| >PRK09249 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=90.90 E-value=2.1 Score=41.86 Aligned_cols=120 Identities=13% Similarity=0.079 Sum_probs=73.5
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCC-eEEEecC-CCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGV-KVIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi-~vildlh-~~~g~~~~~~~~g~ 138 (341)
-++++.++.|+++|+|.|-|++. .+ ++.--..+. ....+.+.+.++.+++.|+ .|-+|+- +.||
T Consensus 148 ~lt~e~l~~l~~aG~~risiGvq--S~-~~~~L~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg---------- 214 (453)
T PRK09249 148 ELDLEMLDALRELGFNRLSLGVQ--DF-DPEVQKAVNRIQPFEFTFALVEAARELGFTSINIDLIYGLPK---------- 214 (453)
T ss_pred cCCHHHHHHHHHcCCCEEEECCC--CC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEccCCC----------
Confidence 46899999999999997777663 12 110000000 1246788899999999999 7888875 3343
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+.++.+.+- +-..+..+.+.+.|... -.+.+....++..+.+.+.+.+=
T Consensus 215 ---------qt~e~~~~~l~~~~~l--~~~~i~~y~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy 280 (453)
T PRK09249 215 ---------QTPESFARTLEKVLEL--RPDRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLAILQQTIETLTEAGY 280 (453)
T ss_pred ---------CCHHHHHHHHHHHHhc--CCCEEEEccCccchhhhhHhcCCCcccCCCHHHHHHHHHHHHHHHHHCCC
Confidence 2344555555555541 22344445555555420 12445667778888888877764
|
|
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=90.80 E-value=4.8 Score=41.70 Aligned_cols=111 Identities=14% Similarity=0.204 Sum_probs=64.2
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecC---CCCCCC---CCCC-------CCCCCCCccCCc--------hhHHHHHHHHHHH
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLH---AAPGSQ---NGNE-------HSATRDGFQEWG--------DSNVADTVAVIDF 159 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh---~~~g~~---~~~~-------~~g~~~~~~~w~--------~~~~~~~~~~~~~ 159 (341)
..+.|+++|+.|+++||.||||+- ..+... +.++ +.+.+.....|. +..++..++.++.
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~~~g~~~~WGs~~fnyg~~EVr~FLLsna~y 518 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTGKRGHHKHWGTRMFKYGDLDVLHFLISNLNW 518 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccCCCCccCCCCCceecCCCHHHHHHHHHHHHH
Confidence 468899999999999999999963 222210 1111 111111122343 5566777788888
Q ss_pred HHHHhCCC----Cce---eEEE--e------ecC-CCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 160 LAARYANR----PSL---AAIE--L------INE-PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 160 la~~y~~~----~~v---~~~e--l------~NE-P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
..+.|+=+ .+| +-.+ + .+| |+ ......-..|++.+-.+|++..|+.+.|.++
T Consensus 519 WleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n--~~~d~dAv~fL~laN~~ih~~~P~~itIAED 586 (872)
T PLN03244 519 WITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCN--QYVDKDALMYLILANEILHALHPKIITIAED 586 (872)
T ss_pred HHHHhCcCcceeecchhheeeccccccccCCcccccc--ccCCchHHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 88877421 111 1111 1 011 11 1112356678888888999999998777763
|
|
| >PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases | Back alignment and domain information |
|---|
Probab=90.75 E-value=0.6 Score=41.09 Aligned_cols=109 Identities=17% Similarity=0.136 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCC-----CC---------------CCCCC----CCC--CCC-CccCCc--------
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAP-----GS---------------QNGNE----HSA--TRD-GFQEWG-------- 146 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~-----g~---------------~~~~~----~~g--~~~-~~~~w~-------- 146 (341)
.+..+.+|+...+.|.+.|++|--.. .. |..++ .+| ... +.....
T Consensus 23 g~~~~~f~~~~~~~ga~~m~T~pm~G~Vakd~~~~~~~~~fp~~~y~~Q~~~d~~~~~~Gng~~~~~~~~~~~~P~~~~~ 102 (239)
T PF12891_consen 23 GDVADTFIDQNLAAGAYSMMTLPMIGYVAKDANSVSESESFPSWRYGPQQWFDPWNPDCGNGVKPDKTALTSNDPDTPDN 102 (239)
T ss_dssp THHHHHHHHHHHHTT-EEEEEE--SSEEES-BSEGBGGGTSSSTTEEEBS-EETTEEEEE-SEESTSSS--SSSGGSSSS
T ss_pred HHHHHHHHHHhhhcCcceeEeecccceEecCCCCcccccCCChhhcccccccCcCcCCCCccccCCCCCCCCCCCCCCcc
Confidence 47788999999999999999886331 00 00000 000 000 000010
Q ss_pred hhHHHHHHHHHHHHHHHhCCC---CceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 147 DSNVADTVAVIDFLAARYANR---PSLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 147 ~~~~~~~~~~~~~la~~y~~~---~~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+.+++ +++..|..+|+.- ..|-+|.|-|||.. .+.+.+++..-+.+..++||+++|+..|+-..
T Consensus 103 ~~y~~---ewV~~l~~~~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~a~v~GP~ 179 (239)
T PF12891_consen 103 PVYMD---EWVNYLVNKYGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPDAKVFGPV 179 (239)
T ss_dssp EEEHH---HHHHHHHHHH--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred HhHHH---HHHHHHHHHHhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEeech
Confidence 12334 4466666677654 36888999999985 23566788888889999999999998777544
|
; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A .... |
| >KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.69 E-value=15 Score=34.67 Aligned_cols=198 Identities=18% Similarity=0.227 Sum_probs=97.7
Q ss_pred HHHHHHH---cCCeEEEecCCCCCCCC--C-CCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCC
Q 019395 108 AFDWAEK---YGVKVIVDLHAAPGSQN--G-NEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPL 180 (341)
Q Consensus 108 ~i~~a~~---~gi~vildlh~~~g~~~--~-~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~ 180 (341)
.|+.|.+ .+|+..-.....||..- + ....|...+.+. +.+-+.++++.-.+.+.|..+. ..+|...-|||.
T Consensus 182 ~ik~A~~~~~~~lklfAsPWsaPgWlKttg~m~G~G~l~g~~~--d~yhqtya~YfvkFleaY~~~gi~FWglt~qNEPs 259 (518)
T KOG2566|consen 182 FIKKAQKYNQGNLKLFASPWSAPGWLKTTGRMNGKGALLGDPG--DIYHQTYARYFVKFLEAYAKHGIQFWGLTTQNEPS 259 (518)
T ss_pred HHHHHHHhcCCCceEEecCCCCCceeeecccccccccccCCCC--chhHHHHHHHHHHHHHHHHhcCceEEeecccCCCC
Confidence 5555544 45777777777776421 1 111111111110 2445566666666666776554 678888999999
Q ss_pred CC----------CCChHHHHHHHHHHHH-HHHhc--CCCceEEEe-CCCCC-CCh-hhhhhccCCCCc-EEEEeeecCCC
Q 019395 181 AP----------GVALDTLKSYYKAGYD-AVRKY--TSTAYVIMS-NRLGP-ADH-KELLSFASGLSR-VVIDVHYYNLF 243 (341)
Q Consensus 181 ~~----------~~~~~~~~~~~~~~~~-aIR~~--~p~~~v~~~-~~~~~-~~~-~~~~~~~~~~~~-~v~~~H~Y~~~ 243 (341)
.+ +-+.+..+.|...-+. ++.+. ..+..|++- +.-+. ..| ...++-++..+. --+.+|.|.-|
T Consensus 260 tG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa~s~~~knvkllilDD~Rg~LP~WadtvlnDpeAakYv~GIaVHwY~df 339 (518)
T KOG2566|consen 260 TGSDKKWKWQTLGFTAETQRDFIKKDLGPALASSKTTKNVKLLILDDQRGLLPHWADTVLNDPEAAKYVHGIAVHWYQDF 339 (518)
T ss_pred cCcccCCceeecccCHHHHHHHHHHhcchhhhcCCcCCceEEEEecCCccCCCccchhhccChhhhhhccceEEEeeccc
Confidence 63 1345666677665543 33333 234555554 32111 111 122222111111 24899999875
Q ss_pred CccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC----CCCCCHHHHHHHHHHHHHHHccCCCcEEEec
Q 019395 244 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN----VKDASKQDYQRFANAQLDVYGRATFGWAYWA 319 (341)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~ 319 (341)
.... .+++.-.+ +....-++-+|=++.+. ..-++-+.-.+|..+.++-+...-.||.=|.
T Consensus 340 ~~pa------~~L~eTh~----------~hP~~fifgTEAc~Gy~~~d~v~~Gswdrae~yasdii~dlnn~vtGWtdwN 403 (518)
T KOG2566|consen 340 LEPA------KHLDETHR----------KHPNTFIFGTEACAGYKSKDGVDLGSWDRAEQYASDIITDLNNHVTGWTDWN 403 (518)
T ss_pred cChh------hhhhhHHh----------hCCCeEEEeehhccccccccCccccchhhHHHHHHHHHHhhhhhccceeeee
Confidence 4221 12221111 11122133345443332 1112334445677777777776677999998
Q ss_pred cccC
Q 019395 320 HKCE 323 (341)
Q Consensus 320 ~k~~ 323 (341)
+--+
T Consensus 404 l~Ld 407 (518)
T KOG2566|consen 404 LILD 407 (518)
T ss_pred eEec
Confidence 7644
|
|
| >TIGR01212 radical SAM protein, TIGR01212 family | Back alignment and domain information |
|---|
Probab=89.56 E-value=5.4 Score=36.73 Aligned_cols=126 Identities=18% Similarity=0.241 Sum_probs=71.7
Q ss_pred hccCHHHHHHHHH---CCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCeEEEecC-CCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSS---NGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVKVIVDLH-AAPGSQNGNEH 135 (341)
Q Consensus 61 ~~~~e~d~~~i~~---~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~vildlh-~~~g~~~~~~~ 135 (341)
..++++.++.|++ .|++ +||.++.+..-+..- ..+. ....+.+.++++.++++|+.|.+++- +.||
T Consensus 119 d~l~~e~l~~L~~l~~~G~~-~~i~lGlQS~~d~~L-~~i~Rg~t~~~~~~ai~~l~~~gi~v~~~lI~GlPg------- 189 (302)
T TIGR01212 119 DCVPDEVLDLLAEYVERGYE-VWVELGLQTAHDKTL-KKINRGHDFACYVDAVKRARKRGIKVCSHVILGLPG------- 189 (302)
T ss_pred CcCCHHHHHHHHHhhhCCce-EEEEEccCcCCHHHH-HHHcCcChHHHHHHHHHHHHHcCCEEEEeEEECCCC-------
Confidence 3456766666664 5885 444443322211000 0000 12467788899999999999877654 3342
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC--------CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP--------GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~--------~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
+..+.+.+.++.+.+- +-..|..+-+.-+|..+ ......+..++..+...++...|+.
T Consensus 190 ------------et~e~~~~t~~~l~~l--~~d~i~i~~l~~~pgT~L~~~~~~g~~~~~~~~e~~~~~~~~l~~l~~~~ 255 (302)
T TIGR01212 190 ------------EDREEMMETAKIVSLL--DVDGIKIHPLHVVKGTKMAKMYEKGELKTLSLEEYISLACDFLEHLPPEV 255 (302)
T ss_pred ------------CCHHHHHHHHHHHHhc--CCCEEEEEEEEecCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCcCe
Confidence 2345666666666542 22345446677788741 1122345678888888888888866
Q ss_pred eE
Q 019395 208 YV 209 (341)
Q Consensus 208 ~v 209 (341)
.|
T Consensus 256 ~i 257 (302)
T TIGR01212 256 VI 257 (302)
T ss_pred EE
Confidence 44
|
This uncharacterized protein family shows significant similarity to TIGR01211, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain. |
| >PRK08446 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.52 E-value=4.5 Score=38.05 Aligned_cols=122 Identities=19% Similarity=0.083 Sum_probs=72.3
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g 137 (341)
.-++++.++.++++|+|.|-|.| ..+-+..- .... ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 94 ~~~~~e~l~~l~~~GvnRiSiGv--QS~~~~~L-~~lgR~~~~~~~~~ai~~lr~~g~~~v~iDli~GlPg--------- 161 (350)
T PRK08446 94 NSATKAWLKGMKNLGVNRISFGV--QSFNEDKL-KFLGRIHSQKQIIKAIENAKKAGFENISIDLIYDTPL--------- 161 (350)
T ss_pred CCCCHHHHHHHHHcCCCEEEEec--ccCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC---------
Confidence 34689999999999999666555 22211100 0000 12467888899999999996 558875 3343
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChHHHHHHHHHHHHHHHhcCCCc
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+.+.+.+.++.+.+ . +-+.|..+.+.=||..+- ... .-...+..+.+.+++.+=.+
T Consensus 162 ----------qt~~~~~~~l~~~~~-l-~~~~is~y~L~~~~gT~l~~~~~~~~-~~~~~~~~~~~~l~~~Gy~~ 223 (350)
T PRK08446 162 ----------DNKKLLKEELKLAKE-L-PINHLSAYSLTIEENTPFFEKNHKKK-DDENLAKFFIEQLEELGFKQ 223 (350)
T ss_pred ----------CCHHHHHHHHHHHHh-c-CCCEEEeccceecCCChhHHhhhcCC-CHHHHHHHHHHHHHHCCCcE
Confidence 234455555555543 2 234566677777886421 001 11246667777777776443
|
|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=89.37 E-value=2.7 Score=40.25 Aligned_cols=145 Identities=16% Similarity=0.028 Sum_probs=84.9
Q ss_pred HHHHHHHHHCCCCEEEcCccccc--c----cCCCCCC-Cc---ccchHHHHHHHHHHHHHcCCeEEEecCCC----CCC-
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWI--A----NDPTPPK-PF---VGGSSKVLDNAFDWAEKYGVKVIVDLHAA----PGS- 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~--~----~~~~~~~-~~---~~~~l~~ld~~i~~a~~~gi~vildlh~~----~g~- 129 (341)
.+.++.+..+|||+|=..|.-.. + .-|.... +. .....+-|..+|+.|+++||.|+-=+--+ +.+
T Consensus 67 ~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~~a~~~s~ 146 (418)
T COG1649 67 KDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYRMAPPTSP 146 (418)
T ss_pred HHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCChHHHHHHHHHhcCCeeeechhhcccCCCCCh
Confidence 67889999999999977552110 0 0011100 11 24478899999999999999988511100 000
Q ss_pred ---------C---CCCCCCCCCCC--ccCCc----hhHHHHHHHHHHHHHHHhCCCC----ceeE---------------
Q 019395 130 ---------Q---NGNEHSATRDG--FQEWG----DSNVADTVAVIDFLAARYANRP----SLAA--------------- 172 (341)
Q Consensus 130 ---------~---~~~~~~g~~~~--~~~w~----~~~~~~~~~~~~~la~~y~~~~----~v~~--------------- 172 (341)
. .+.... ...+ ...|. ++.++...+.+.+++++|.=+. ....
T Consensus 147 ~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~ldPg~Pevq~~i~~lv~evV~~YdvDGIQfDd~fy~~~~~gy~~~~~~~y 225 (418)
T COG1649 147 LTKRHPHWLTTKRPGWVYV-RHQGWGKRVWLDPGIPEVQDFITSLVVEVVRNYDVDGIQFDDYFYYPIPFGYDPDTVTLY 225 (418)
T ss_pred hHhhCCCCcccCCCCeEEE-ecCCceeeeEeCCCChHHHHHHHHHHHHHHhCCCCCceecceeecccCccccCchHHHHH
Confidence 0 000000 0011 23343 7788888899999999985322 1221
Q ss_pred -EEeecCCCCCCCChH--------HHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 173 -IELINEPLAPGVALD--------TLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 173 -~el~NEP~~~~~~~~--------~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+|-.+.|- .+.. ...+++.++..+||++.|+..+.++.
T Consensus 226 ~~et~~~~~---~~~~~w~~WRr~~i~~~v~~i~~~VKavKp~v~~svsp 272 (418)
T COG1649 226 RYETGKGPP---SNPDQWTDWRRDNITALVAQISQTVKAVKPNVKFSVSP 272 (418)
T ss_pred HhhccCCCC---CCHHHHHHHHHHhHHHHHHHHHHHHHhhCCCeEEEEcc
Confidence 11111111 1222 34568899999999999999998876
|
|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.15 E-value=0.82 Score=44.93 Aligned_cols=58 Identities=26% Similarity=0.351 Sum_probs=39.7
Q ss_pred HHHHHHHHCCCCEEEc-Cccccccc----CCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAN----DPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~----~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+++|=| |+...... ........+ -+.++.++++|+.|+++||+||+|+
T Consensus 33 ~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~Gt~~d~~~li~~~H~~gi~vi~D~ 97 (505)
T COG0366 33 EKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFKELVEEAHKRGIKVILDL 97 (505)
T ss_pred HhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 6789999999999966 23211000 000001111 3578999999999999999999998
|
|
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=89.12 E-value=0.87 Score=41.87 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+.++.+++.||.-|=.++.. | +.-.+..+.+++++++.|.+.|++||+|+-
T Consensus 19 ~~Yi~~~~~~Gf~~IFtsl~~-----~---~~~~~~~~~~~~ell~~Anklg~~vivDvn 70 (360)
T COG3589 19 IAYIDRMHKYGFKRIFTSLLI-----P---EEDAELYFHRFKELLKEANKLGLRVIVDVN 70 (360)
T ss_pred HHHHHHHHHcCccceeeeccc-----C---CchHHHHHHHHHHHHHHHHhcCcEEEEEcC
Confidence 566778889999977665532 2 222345899999999999999999999975
|
|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
Probab=89.04 E-value=1.4 Score=45.91 Aligned_cols=59 Identities=19% Similarity=0.189 Sum_probs=40.5
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc------CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN------DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~------~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-+..|+++|+++|=|+=-+.... +.......++ +..+.++++++.|+++||+||+|+
T Consensus 19 ~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDi 85 (825)
T TIGR02401 19 AALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDI 85 (825)
T ss_pred HHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 6788999999999997732111100 0001111122 368999999999999999999997
|
This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis. |
| >PRK08207 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=88.89 E-value=5 Score=39.63 Aligned_cols=123 Identities=17% Similarity=0.242 Sum_probs=73.6
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCC-eEEEecC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGV-KVIVDLH-AAPGSQNGNEHSA 137 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi-~vildlh-~~~g~~~~~~~~g 137 (341)
..++++.++.|+++|+| ||.|+-..+-+..- ..+ .....+.+.++++.|++.|+ .|-+|+- +.||
T Consensus 265 d~it~e~L~~Lk~~Gv~--RISIGvQS~~d~vL-k~igR~ht~e~v~~ai~~ar~~Gf~~In~DLI~GLPg--------- 332 (488)
T PRK08207 265 DTITEEKLEVLKKYGVD--RISINPQTMNDETL-KAIGRHHTVEDIIEKFHLAREMGFDNINMDLIIGLPG--------- 332 (488)
T ss_pred CCCCHHHHHHHHhcCCC--eEEEcCCcCCHHHH-HHhCCCCCHHHHHHHHHHHHhCCCCeEEEEEEeCCCC---------
Confidence 35789999999999999 55554332211000 000 02357888899999999999 6778875 3343
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+.+.+.+.++.+.+ ++ -+.+-.+.|.=+|..+ ..+.+.....++.+.+.+++.+=..
T Consensus 333 ----------Et~ed~~~tl~~l~~-L~-pd~isv~~L~i~~gT~l~~~~~~~~~~~~~~~~~m~~~a~~~l~~~Gy~~ 399 (488)
T PRK08207 333 ----------EGLEEVKHTLEEIEK-LN-PESLTVHTLAIKRASRLTENKEKYKVADREEIEKMMEEAEEWAKELGYVP 399 (488)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-cCEEEEEeceEcCCChHHHhcCcCCCcCHHHHHHHHHHHHHHHHHcCCHh
Confidence 334555566665544 21 2234334455455431 1234566778888888888777544
|
|
| >cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=87.63 E-value=14 Score=34.67 Aligned_cols=142 Identities=12% Similarity=0.152 Sum_probs=76.5
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCCCC-----CCcccc---hHHHHHHHHHHHHHcCCeEEEecCCCCCCCC--
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPTPP-----KPFVGG---SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN-- 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~~~-----~~~~~~---~l~~ld~~i~~a~~~gi~vildlh~~~g~~~-- 131 (341)
++-++.|+..++|.+-+.+.- |.+.-+.-+ +.+..+ ..+.++++|+.|+++||.||..+-. ||...
T Consensus 21 k~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~~~~YT~~di~eiv~yA~~rgI~vIPEID~-PGH~~a~ 99 (348)
T cd06562 21 KRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSPSEVYTPEDVKEIVEYARLRGIRVIPEIDT-PGHTGSW 99 (348)
T ss_pred HHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCCCceECHHHHHHHHHHHHHcCCEEEEeccC-chhhHHH
Confidence 677888899999999987742 222211100 111111 4789999999999999999987632 22110
Q ss_pred ----------CCC----CCCCCC-CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC------------
Q 019395 132 ----------GNE----HSATRD-GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG------------ 183 (341)
Q Consensus 132 ----------~~~----~~g~~~-~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~------------ 183 (341)
... .+.... +...-. ++..+-..++++.+++-|.+.---+|=|=.+......
T Consensus 100 ~~~~p~l~~~~~~~~~~~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~lF~~~~iHiGgDE~~~~~w~~~p~~~~~m~~~g 179 (348)
T cd06562 100 GQGYPELLTGCYAVWRKYCPEPPCGQLNPTNPKTYDFLKTLFKEVSELFPDKYFHLGGDEVNFNCWNSNPEIQKFMKKNN 179 (348)
T ss_pred HHhChhhhCCCCccccccccCCCCccccCCChhHHHHHHHHHHHHHHhcCCcceEeecCCCCCCcccCCHHHHHHHHHcC
Confidence 000 000000 000111 4566666778888888886322113322222211100
Q ss_pred -CC-hHHHHHHHHHHHHHHHhcCCCc
Q 019395 184 -VA-LDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 184 -~~-~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+ .+.+..|.+++.+.+++.+...
T Consensus 180 ~~~~~~l~~~f~~~~~~~l~~~Gk~~ 205 (348)
T cd06562 180 GTDYSDLESYFIQRALDIVRSLGKTP 205 (348)
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCeE
Confidence 11 1233457888889999887443
|
The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in |
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=87.32 E-value=2.1 Score=44.97 Aligned_cols=60 Identities=13% Similarity=0.114 Sum_probs=40.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc------cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~------~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-+..|+++|+|+|=|+=-+... -+.......++ +..+.++++++.|+++||+||+|+-
T Consensus 23 ~~~l~YL~~LGis~IyLsPi~~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDiV 90 (879)
T PRK14511 23 AELVPYFADLGVSHLYLSPILAARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDIV 90 (879)
T ss_pred HHHhHHHHHcCCCEEEECcCccCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 678899999999999874211110 00000111122 3679999999999999999999983
|
|
| >cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=87.07 E-value=17 Score=34.27 Aligned_cols=138 Identities=10% Similarity=0.060 Sum_probs=76.0
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCC-C--------------------------CCCcccchHHHHHHHHHHHHH
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPT-P--------------------------PKPFVGGSSKVLDNAFDWAEK 114 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~-~--------------------------~~~~~~~~l~~ld~~i~~a~~ 114 (341)
++-++.|+..++|.+-+.+.- |.+.-+. | ++-| ..+.++++|+.|++
T Consensus 21 k~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~Y---T~~di~eiv~yA~~ 97 (357)
T cd06563 21 KRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFY---TQEEIREIVAYAAE 97 (357)
T ss_pred HHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceE---CHHHHHHHHHHHHH
Confidence 677888999999999998742 1111110 0 0112 37899999999999
Q ss_pred cCCeEEEecCCCCCCCC-------CCCCC----------CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEee
Q 019395 115 YGVKVIVDLHAAPGSQN-------GNEHS----------ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELI 176 (341)
Q Consensus 115 ~gi~vildlh~~~g~~~-------~~~~~----------g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~ 176 (341)
+||.||..+-. ||... ..... +...+...-. +...+-..++++++++-|.+.---+|-|=.
T Consensus 98 rgI~VIPEID~-PGH~~a~l~~~pel~~~~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~lF~~~~iHiGgDE~ 176 (357)
T cd06563 98 RGITVIPEIDM-PGHALAALAAYPELGCTGGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAELFPSPYIHIGGDEV 176 (357)
T ss_pred cCCEEEEecCC-chhHHHHHHhCccccCCCCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHhCCCCeEEEecccc
Confidence 99999987643 12100 00000 0000011111 566667778888888888642211332222
Q ss_pred cCCCCC-------------CCCh-HHHHHHHHHHHHHHHhcCCC
Q 019395 177 NEPLAP-------------GVAL-DTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 177 NEP~~~-------------~~~~-~~~~~~~~~~~~aIR~~~p~ 206 (341)
+.-... ..+. +.+..|.+++.+.+++.+.+
T Consensus 177 ~~~~w~~~~~~~~~~~~~g~~~~~~l~~~f~~~~~~~v~~~G~~ 220 (357)
T cd06563 177 PKGQWEKSPACQARMKEEGLKDEHELQSYFIKRVEKILASKGKK 220 (357)
T ss_pred CCcccccCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHcCCE
Confidence 221110 0122 23456788999999987643
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >smart00812 Alpha_L_fucos Alpha-L-fucosidase | Back alignment and domain information |
|---|
Probab=86.66 E-value=19 Score=34.35 Aligned_cols=130 Identities=13% Similarity=0.035 Sum_probs=73.0
Q ss_pred CHHHHHHHHHCCCCEEEcCcccc---cccCCCCCCCcc----cchHHHHHHHHHHHHHcCCeEEEecCCC----CCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWW---IANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAA----PGSQNG 132 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~---~~~~~~~~~~~~----~~~l~~ld~~i~~a~~~gi~vildlh~~----~g~~~~ 132 (341)
.++-++.+|++|++.|=|---.- ..- ++....++ .-.-+.|.++++.|+++||++-+-+... |.....
T Consensus 83 ~~~Wa~~~k~AGakY~vlTaKHHDGF~lw-~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~Y~S~~DW~~p~y~~~ 161 (384)
T smart00812 83 PEEWADLFKKAGAKYVVLTAKHHDGFCLW-DSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGLYHSLFDWFNPLYAGP 161 (384)
T ss_pred HHHHHHHHHHcCCCeEEeeeeecCCcccc-CCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEEEcCHHHhCCCccccc
Confidence 46778888999999998742110 000 11111221 1145889999999999999998833211 111100
Q ss_pred CCCCCCCCCccCCchhHHHH---HHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 133 NEHSATRDGFQEWGDSNVAD---TVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 133 ~~~~g~~~~~~~w~~~~~~~---~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.........+ +.+.+. +..-+++|..+|+. .-++ +|...+-. ...+ -.+++++.||+..|+.
T Consensus 162 ---~~~~~~~~~~-~~~~~y~~~~~~Ql~ELit~Ygp-d~lW-fD~~~~~~-----~~~~--~~~~l~~~~~~~qP~~ 226 (384)
T smart00812 162 ---TSSDEDPDNW-PRFQEFVDDWLPQLRELVTRYKP-DLLW-FDGGWEAP-----DDYW--RSKEFLAWLYNLSPVK 226 (384)
T ss_pred ---cccccccccc-hhHHHHHHHHHHHHHHHHhcCCC-ceEE-EeCCCCCc-----cchh--cHHHHHHHHHHhCCCC
Confidence 0000001111 223333 47788889999977 5555 78654311 1222 2567888899999976
|
O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| >TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type | Back alignment and domain information |
|---|
Probab=85.54 E-value=3 Score=42.16 Aligned_cols=60 Identities=20% Similarity=0.069 Sum_probs=42.2
Q ss_pred HHHHHHHHHCCCCEEEcCccccc-----c-cCCCCCC-------Cccc--chHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWI-----A-NDPTPPK-------PFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~-----~-~~~~~~~-------~~~~--~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
+.-.+.|+++|+++|=+.=.+.. . ..|.... .+++ +.++.++++++.|+++||+||+||-
T Consensus 77 ~~~wdyL~~LGV~~iwl~P~~~SGgi~g~~~tP~~D~gyDi~d~~Idp~~GT~eDf~~L~~~Ah~~G~~vi~DlV 151 (688)
T TIGR02455 77 DALWKALSEIGVQGIHNGPIKLSGGIRGREFTPSIDGNFDRISFDIDPLLGSEEELIQLSRMAAAHNAITIDDII 151 (688)
T ss_pred hHHHHHHHHhCCCEEEeCcceecccccccCCCCCCCCCCCcccCccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 67788999999999998533221 0 0121111 1122 4689999999999999999999984
|
Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits. |
| >PRK08898 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=85.04 E-value=11 Score=36.11 Aligned_cols=123 Identities=17% Similarity=0.119 Sum_probs=71.6
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCeEEEecCC-CCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVKVIVDLHA-APGSQNGNEHSAT 138 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~vildlh~-~~g~~~~~~~~g~ 138 (341)
..++++.++.++++|+|-|=|.| ..+ ++.--... .....+.+.++++.+++.+..|-+||-. .||
T Consensus 118 ~~~~~e~L~~l~~~GvnrisiGv--QS~-~~~~L~~l~R~~~~~~~~~~i~~~~~~~~~v~~dlI~GlPg---------- 184 (394)
T PRK08898 118 GTFEAEKFAQFRASGVNRLSIGI--QSF-NDAHLKALGRIHDGAEARAAIEIAAKHFDNFNLDLMYALPG---------- 184 (394)
T ss_pred CCCCHHHHHHHHHcCCCeEEEec--ccC-CHHHHHHhCCCCCHHHHHHHHHHHHHhCCceEEEEEcCCCC----------
Confidence 34678999999999999665554 222 11000000 0113466777888888888888888753 343
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
...+.+.+-++.+.+ + +-+.|-.+.+.=||..+ ..+.+.....++.+.+.+++.+-.+
T Consensus 185 ---------qt~~~~~~~l~~~~~-l-~p~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 249 (394)
T PRK08898 185 ---------QTLDEALADVETALA-F-GPPHLSLYHLTLEPNTLFAKFPPALPDDDASADMQDWIEARLAAAGYAH 249 (394)
T ss_pred ---------CCHHHHHHHHHHHHh-c-CCCEEEEeeeEECCCChhhhccCCCCChHHHHHHHHHHHHHHHHcCCch
Confidence 123344444444433 2 22356667777777542 1233456677777778888777544
|
|
| >cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin | Back alignment and domain information |
|---|
Probab=84.97 E-value=17 Score=33.59 Aligned_cols=58 Identities=10% Similarity=0.263 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCC-C--------CCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPT-P--------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~-~--------~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++-++.|+..++|.+-+.+.- |.+.-+. | ++.| ..+.+.++|+.|+++||.||..+-.
T Consensus 21 k~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g~~~~~y---T~~di~elv~yA~~rgI~vIPEId~ 90 (311)
T cd06570 21 KRQLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKASDGLYY---TQEQIREVVAYARDRGIRVVPEIDV 90 (311)
T ss_pred HHHHHHHHHhCCeEEEEEEecCCCceeecCCCccccccCCCCCcc---CHHHHHHHHHHHHHcCCEEEEeecC
Confidence 677888999999999987731 1221111 1 1123 3689999999999999999987754
|
Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >TIGR00538 hemN oxygen-independent coproporphyrinogen III oxidase | Back alignment and domain information |
|---|
Probab=84.48 E-value=5.7 Score=38.86 Aligned_cols=120 Identities=14% Similarity=0.157 Sum_probs=69.8
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc-cchHHHHHHHHHHHHHcCCe-EEEecC-CCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV-GGSSKVLDNAFDWAEKYGVK-VIVDLH-AAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~-~~~l~~ld~~i~~a~~~gi~-vildlh-~~~g~~~~~~~~g~ 138 (341)
.++++.++.|+++|+|.|-|.+. .+ ++.--..+. ....+.+.+.++.+++.|+. |-+|+- +.||
T Consensus 148 ~l~~e~l~~lk~~G~~risiGvq--S~-~~~~l~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg---------- 214 (455)
T TIGR00538 148 YITKDVIDALRDEGFNRLSFGVQ--DF-NKEVQQAVNRIQPEEMIFELMNHAREAGFTSINIDLIYGLPK---------- 214 (455)
T ss_pred cCCHHHHHHHHHcCCCEEEEcCC--CC-CHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEeeCCC----------
Confidence 35899999999999997776652 12 110000000 12367788999999999996 667764 3343
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+.++.+.+ + +-..+..+.+.=+|.. .-.+.+...++++.+.+.+++.+=
T Consensus 215 ---------qt~e~~~~tl~~~~~-l-~~~~is~y~L~~~p~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~L~~~Gy 280 (455)
T TIGR00538 215 ---------QTKESFAKTLEKVAE-L-NPDRLAVFNYAHVPWVKPAQRKIPEAALPSAEEKLDILQETIAFLTEAGY 280 (455)
T ss_pred ---------CCHHHHHHHHHHHHh-c-CCCEEEEecCccccchhHHHhcccccCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 234555555555554 2 1223433444223321 012456677788888888877663
|
This model represents HemN, the oxygen-independent coproporphyrinogen III oxidase that replaces HemF function under anaerobic conditions. Several species, including E. coli, Helicobacter pylori, and Aquifex aeolicus, have both a member of this family and a member of another, closely related family for which there is no evidence of coproporphyrinogen III oxidase activity. Members of this family have a perfectly conserved motif PYRT[SC]YP in a region N-terminal to the region of homology with the related uncharacterized protein. |
| >PRK09856 fructoselysine 3-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=84.36 E-value=16 Score=32.76 Aligned_cols=122 Identities=10% Similarity=-0.021 Sum_probs=69.1
Q ss_pred cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecC
Q 019395 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178 (341)
Q Consensus 99 ~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE 178 (341)
+..++.+++.++.|+..|...|+-.....+. . . . .....+.+++.++.+++.-+...-.+++|.++.
T Consensus 86 ~~~~~~~~~~i~~a~~lGa~~i~~~~~~~~~----~--~----~---~~~~~~~~~~~l~~l~~~a~~~gv~l~iE~~~~ 152 (275)
T PRK09856 86 RESLDMIKLAMDMAKEMNAGYTLISAAHAGY----L--T----P---PNVIWGRLAENLSELCEYAENIGMDLILEPLTP 152 (275)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCCCCCC----C--C----C---HHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC
Confidence 4578999999999999999987542211111 0 0 0 134556777777777776666555577776642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcC-CCceEEEeCCC---CCCChhhhhhccCCCCcEEEEeeecCC
Q 019395 179 PLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNRL---GPADHKELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 179 P~~~~~~~~~~~~~~~~~~~aIR~~~-p~~~v~~~~~~---~~~~~~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
+.. ....-..++.+.+++++ |+..+.+..+. .+.++...+.. ...-+..+|.-..
T Consensus 153 ~~~------~~~~t~~~~~~l~~~~~~~~v~~~~D~~h~~~~~~~~~~~i~~---~~~rI~~vHi~D~ 211 (275)
T PRK09856 153 YES------NVVCNANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDK---LGDKLRHLHIVDS 211 (275)
T ss_pred Ccc------cccCCHHHHHHHHHHcCCCcceeEEeecchhcCCCCHHHHHHH---hCCcEEEEEEEcC
Confidence 211 11122556777788887 56656665322 11122222221 2334777787643
|
|
| >TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative | Back alignment and domain information |
|---|
Probab=84.29 E-value=5.6 Score=35.90 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=40.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++-++..+.+|.+.||++-.- ...............+.+.++++.|+++|+.+.|-.|.
T Consensus 97 ~~~i~~a~~lG~~~v~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~A~~~Gv~l~lE~~~ 155 (279)
T TIGR00542 97 EKAIQLARDLGIRTIQLAGYD--VYYEEHDEETRRRFREGLKEAVELAARAQVTLAVEIMD 155 (279)
T ss_pred HHHHHHHHHhCCCEEEecCcc--cccCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC
Confidence 788888999999999985321 00000001111335688889999999999999998763
|
This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein. |
| >PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=83.22 E-value=5.6 Score=35.87 Aligned_cols=59 Identities=14% Similarity=0.172 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
+.-++..+.+|.+.||++ +......+.. ....+...+.|+++.+.|+++||++.+-.|.
T Consensus 97 ~~~i~~a~~lG~~~v~~~-~~~~~~~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~ 155 (284)
T PRK13210 97 KKAIRLAQDLGIRTIQLA-GYDVYYEEKS-EETRQRFIEGLAWAVEQAAAAQVMLAVEIMD 155 (284)
T ss_pred HHHHHHHHHhCCCEEEEC-Cccccccccc-HHHHHHHHHHHHHHHHHHHHhCCEEEEEecC
Confidence 677888899999999985 2211111111 1111335678899999999999999887774
|
|
| >PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional | Back alignment and domain information |
|---|
Probab=82.94 E-value=3.8 Score=46.14 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=40.8
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-CC-----CCCCCccc--chHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-DP-----TPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-~~-----~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-+.+|+++|+|+|=+.=-+.... .. ......++ +..+.++++++.|+++||+||+|+-
T Consensus 761 ~~~l~Yl~~LGv~~i~lsPi~~a~~gs~hGYdv~D~~~idp~lG~~edf~~Lv~~ah~~Gi~vilDiV 828 (1693)
T PRK14507 761 EAILPYLAALGISHVYASPILKARPGSTHGYDIVDHSQINPEIGGEEGFERFCAALKAHGLGQLLDIV 828 (1693)
T ss_pred HHHhHHHHHcCCCEEEECCCcCCCCCCCCCCCCCCCCccCcccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 6778899999999998742221100 00 00011122 3688999999999999999999983
|
|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Probab=82.32 E-value=18 Score=34.17 Aligned_cols=88 Identities=17% Similarity=0.115 Sum_probs=54.8
Q ss_pred HHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecC-CCC-CCC
Q 019395 107 NAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE-PLA-PGV 184 (341)
Q Consensus 107 ~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE-P~~-~~~ 184 (341)
+++..|+++|++|++.- ..+. . ..=.+..++++++-+-.++++|. .. |++|-=| |.. ...
T Consensus 68 ~~~~~A~~~~v~v~~~~-~~~~-----~--------~l~~~~~R~~fi~siv~~~~~~g-fD---GIdIDwE~p~~~~~~ 129 (358)
T cd02875 68 ELLCYAHSKGVRLVLKG-DVPL-----E--------QISNPTYRTQWIQQKVELAKSQF-MD---GINIDIEQPITKGSP 129 (358)
T ss_pred HHHHHHHHcCCEEEEEC-ccCH-----H--------HcCCHHHHHHHHHHHHHHHHHhC-CC---eEEEcccCCCCCCcc
Confidence 78899999999999861 1110 0 00014677788877777777773 23 3333223 221 123
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 185 ALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 185 ~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
..+.+..+++++.+++++.+++..|.+.
T Consensus 130 d~~~~t~llkelr~~l~~~~~~~~Lsva 157 (358)
T cd02875 130 EYYALTELVKETTKAFKKENPGYQISFD 157 (358)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 3567888899998899887766556554
|
Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase. |
| >PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea | Back alignment and domain information |
|---|
Probab=82.15 E-value=2.1 Score=40.40 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=36.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++.++.+++.||..|=.++.- |. .-.+..++++++++++|+++||+|++|+..
T Consensus 17 ~~yi~~a~~~Gf~~iFTSL~i-----pe---~~~~~~~~~~~~l~~~a~~~~~~v~~Disp 69 (357)
T PF05913_consen 17 KAYIEKAAKYGFKRIFTSLHI-----PE---DDPEDYLERLKELLKLAKELGMEVIADISP 69 (357)
T ss_dssp HHHHHHHHCTTEEEEEEEE-----------------HHHHHHHHHHHHHHCT-EEEEEE-C
T ss_pred HHHHHHHHHCCCCEEECCCCc-----CC---CCHHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 566788889999877665532 21 112457899999999999999999999863
|
The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A. |
| >PRK14565 triosephosphate isomerase; Provisional | Back alignment and domain information |
|---|
Probab=82.05 E-value=35 Score=30.21 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=73.5
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
-|--...|+++|++.|=|..+= ....+ .+.-+.+.+=+..|.++||.+|+.+-...-. ...|
T Consensus 74 GevS~~mLkd~G~~~viiGHSE-------RR~~f-~Etd~~V~~Kv~~al~~gl~pIvCiGE~~e~----r~~~------ 135 (237)
T PRK14565 74 GEISAKMLKECGCSYVILGHSE-------RRSTF-HETDSDIRLKAESAIESGLIPIICVGETLED----RENG------ 135 (237)
T ss_pred CccCHHHHHHcCCCEEEECccc-------ccCcC-CcCHHHHHHHHHHHHHCCCEEEEEcCCCHHH----HHcc------
Confidence 3556678889999988875531 11111 2223445555699999999999986532100 0000
Q ss_pred CCchhHHHHHHHHHHHHHHHhCC-CCceeEEEeecCCCCC-CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChh
Q 019395 144 EWGDSNVADTVAVIDFLAARYAN-RPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK 221 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~-~~~v~~~el~NEP~~~-~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~ 221 (341)
...+. +.+++..-+.+ .+-+++ =||.+. +.....=....++++..||+..++..|+.+++-...+..
T Consensus 136 ----~~~~~---~~~Ql~~~l~~~~~ivIA----YEPvWAIGtG~~a~~e~i~~~~~~Ir~~~~~~~IlYGGSV~~~N~~ 204 (237)
T PRK14565 136 ----MTKDV---LLEQCSNCLPKHGEFIIA----YEPVWAIGGSTIPSNDAIAEAFEIIRSYDSKSHIIYGGSVNQENIR 204 (237)
T ss_pred ----ChHHH---HHHHHHHHhcCCCCEEEE----ECCHHHhCCCCCCCHHHHHHHHHHHHHhCCCceEEEcCccCHhhHH
Confidence 11111 12233332322 234455 466641 111112334577888999998888889888765545556
Q ss_pred hhhhc
Q 019395 222 ELLSF 226 (341)
Q Consensus 222 ~~~~~ 226 (341)
.++..
T Consensus 205 ~l~~~ 209 (237)
T PRK14565 205 DLKSI 209 (237)
T ss_pred HHhcC
Confidence 66654
|
|
| >cd07948 DRE_TIM_HCS Saccharomyces cerevisiae homocitrate synthase and related proteins, catalytic TIM barrel domain | Back alignment and domain information |
|---|
Probab=81.52 E-value=1.9 Score=38.90 Aligned_cols=63 Identities=10% Similarity=0.096 Sum_probs=44.6
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
.+.+|++...+.|++.||+.++-........-..-.++.++.+.++++.|+++|+.|.+.+-.
T Consensus 72 ~~~~di~~a~~~g~~~i~i~~~~S~~~~~~~~~~~~~e~~~~~~~~i~~a~~~G~~v~~~~ed 134 (262)
T cd07948 72 CHMDDARIAVETGVDGVDLVFGTSPFLREASHGKSITEIIESAVEVIEFVKSKGIEVRFSSED 134 (262)
T ss_pred CCHHHHHHHHHcCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEe
Confidence 468999999999999999977432111000001112457899999999999999999988753
|
Homocitrate synthase (HCS) catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate to form homocitrate, the first step in the lysine biosynthesis pathway. This family includes the Yarrowia lipolytica LYS1 protein as well as the Saccharomyces cerevisiae LYS20 and LYS21 proteins. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. Th |
| >cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD) | Back alignment and domain information |
|---|
Probab=81.47 E-value=25 Score=32.45 Aligned_cols=94 Identities=11% Similarity=0.116 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
...+.+-|+.|++.|++|+|.+-+..++. ..-.+...+.+++.+..+.+.| .+-|+|+-=|...
T Consensus 59 ~~~~~~~i~~~q~~G~KVllSiGG~~~~~------------~~~~~~~~~~fa~sl~~~~~~~----g~DGiDiD~E~~~ 122 (312)
T cd02871 59 PAEFKADIKALQAKGKKVLISIGGANGHV------------DLNHTAQEDNFVDSIVAIIKEY----GFDGLDIDLESGS 122 (312)
T ss_pred hHHHHHHHHHHHHCCCEEEEEEeCCCCcc------------ccCCHHHHHHHHHHHHHHHHHh----CCCeEEEecccCC
Confidence 45678888999999999999985442211 0011355667777777777766 4667778777542
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCC-CceEEE
Q 019395 182 PGVALDTLKSYYKAGYDAVRKYTS-TAYVIM 211 (341)
Q Consensus 182 ~~~~~~~~~~~~~~~~~aIR~~~p-~~~v~~ 211 (341)
.......-..-+.++++.+|+.-+ +.+|.+
T Consensus 123 ~~~~~~~~~~~~~~~lk~lr~~~~~~~~lT~ 153 (312)
T cd02871 123 NPLNATPVITNLISALKQLKDHYGPNFILTM 153 (312)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 111112233344455566665543 334444
|
ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus. |
| >PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed | Back alignment and domain information |
|---|
Probab=80.13 E-value=8 Score=34.89 Aligned_cols=59 Identities=8% Similarity=0.143 Sum_probs=39.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++-++..+.+|...|+++- +.....+. .........+.++++.+.|+++|+.+.+-.|.
T Consensus 102 ~~~i~~a~~lG~~~i~~~~-~~~~~~~~-~~~~~~~~~~~l~~l~~~A~~~GV~i~iE~~~ 160 (283)
T PRK13209 102 RKAIQLAQDLGIRVIQLAG-YDVYYEQA-NNETRRRFIDGLKESVELASRASVTLAFEIMD 160 (283)
T ss_pred HHHHHHHHHcCCCEEEECC-cccccccc-HHHHHHHHHHHHHHHHHHHHHhCCEEEEeecC
Confidence 7788889999999999852 10000000 01111234678888999999999998888774
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 341 | ||||
| 1eqp_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans Length | 3e-38 | ||
| 2pb1_A | 400 | Exo-b-(1,3)-glucanase From Candida Albicans In Comp | 3e-38 | ||
| 2pc8_A | 400 | E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida | 3e-38 | ||
| 2pbo_A | 400 | E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida A | 3e-38 | ||
| 1cz1_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 | 4e-38 | ||
| 3n9k_A | 399 | F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 5e-38 | ||
| 3o6a_A | 399 | F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 8e-38 | ||
| 2pf0_A | 400 | F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida | 2e-37 | ||
| 1h4p_A | 408 | Crystal Structure Of Exo-1,3-Beta Glucanse From Sac | 2e-30 | ||
| 1cec_A | 343 | A Common Protein Fold And Similar Active Site In Tw | 5e-12 | ||
| 1cen_A | 343 | Cellulase (Celc) Mutant With Glu 140 Replaced By Gl | 1e-11 | ||
| 3azr_A | 317 | Diverse Substrates Recognition Mechanism Revealed B | 7e-09 | ||
| 3mmu_A | 317 | Crystal Structure Of Endoglucanase Cel5a From The H | 7e-09 | ||
| 3amg_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 4e-08 | ||
| 3aof_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 4e-08 | ||
| 1vjz_A | 341 | Crystal Structure Of Endoglucanase (Tm1752) From Th | 3e-06 |
| >pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans Length = 394 | Back alignment and structure |
|
| >pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A Length = 400 | Back alignment and structure |
|
| >pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Length = 400 | Back alignment and structure |
|
| >pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution Length = 394 | Back alignment and structure |
|
| >pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A Length = 399 | Back alignment and structure |
|
| >pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A Length = 399 | Back alignment and structure |
|
| >pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae Length = 408 | Back alignment and structure |
|
| >pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 343 | Back alignment and structure |
|
| >pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln Complexed With Cellohexaose Length = 343 | Back alignment and structure |
|
| >pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By Thermotoga Maritima Cel5a Structures In Complex With Cellobiose Length = 317 | Back alignment and structure |
|
| >pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The Hyperthermophilic Thermotoga Maritima Length = 317 | Back alignment and structure |
|
| >pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Cellobiose Substrate, Mutant Form Length = 317 | Back alignment and structure |
|
| >pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Mannotriose Substrate Length = 317 | Back alignment and structure |
|
| >pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From Thermotoga Maritima At 2.05 A Resolution Length = 341 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 2e-69 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 9e-67 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 2e-58 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 1e-52 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 2e-48 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 9e-41 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 3e-30 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 1e-29 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 5e-29 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 1e-28 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 7e-28 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 2e-26 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 4e-26 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 1e-25 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 5e-25 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 1e-23 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 2e-21 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 4e-21 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 1e-20 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 2e-20 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 5e-20 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 8e-20 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 1e-19 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 1e-18 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 4e-18 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 1e-17 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 3e-16 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 3e-16 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 2e-14 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 1e-12 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 5e-09 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 4e-07 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 4e-07 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 8e-06 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 1e-04 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 5e-04 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 221 bits (564), Expect = 2e-69
Identities = 103/336 (30%), Positives = 158/336 (47%), Gaps = 38/336 (11%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 50 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 108
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 109 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 168
Query: 159 FLAARYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 169 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAA 228
Query: 216 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA----- 269
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 229 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 288
Query: 270 VTTSNGPLTFVGEWTCEWNVK--------------------------DASKQDYQRFANA 303
+ + LT +W N D K D +R+ A
Sbjct: 289 AGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEA 348
Query: 304 QLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 338
QLD + T GW +W+ K E A WS + + NG
Sbjct: 349 QLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 383
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 214 bits (546), Expect = 9e-67
Identities = 89/343 (25%), Positives = 143/343 (41%), Gaps = 43/343 (12%)
Query: 38 GEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF 97
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 49 DEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYV 108
Query: 98 VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVI 157
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V+
Sbjct: 109 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVL 168
Query: 158 DFLAARYANRPS---LAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKYTSTAYVIMSN 213
+++ +Y+ + IELINEPL P + +D Y Y+ +R + VI+ +
Sbjct: 169 NYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 228
Query: 214 RL--GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD----- 266
+ ++ G V ID H+Y +F+++ ++ ++I
Sbjct: 229 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESH 288
Query: 267 ----------LGAVTTSNGPLTFVGEWTCEWNVKDAS--------------------KQD 296
L + F + W D + K++
Sbjct: 289 WIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKEN 348
Query: 297 YQRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 338
+R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 349 TRRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 191 bits (486), Expect = 2e-58
Identities = 57/330 (17%), Positives = 112/330 (33%), Gaps = 55/330 (16%)
Query: 49 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 108
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 109 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 168
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLF----EDPNQQKRFVDIWRFLAKRYINER 130
Query: 169 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS--NRLGPADHKELLSF 226
A EL+N+ + P A+R+ ST ++ + N P + K L
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 227 ASGLSRVVIDVHYYNLF-----------------------------------SNNFNGLN 251
+V + H+YN F + ++ +
Sbjct: 189 DDD--YIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMM 246
Query: 252 VQQNIDYVNNQRASDLGAVT---TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVY 308
N+ DL + GE+ + A + ++ + +
Sbjct: 247 ELNNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGV---IAIADLESRIKWHEDYISLL 303
Query: 309 GRATFGWAYWAHKCEA----NHWSLKWMIE 334
G A W +K N E
Sbjct: 304 EEYDIGGAVWNYKKMDFEIYNEDRKPVSQE 333
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 1e-52
Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 32/299 (10%)
Query: 55 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 114
+EDF +++ N VRIP+ + +D P + +D W EK
Sbjct: 29 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEK 88
Query: 115 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPS-LAAI 173
YG+ + + LH APG E + +++ ++ + F+A RY S +
Sbjct: 89 YGIHICISLHRAPGYSVNKEVEEKTNLWKD--ETAQEAFIHHWSFIARRYKGISSTHLSF 146
Query: 174 ELINEPLAPG---VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 230
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 147 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 202
Query: 231 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS----------------- 273
V Y FS + D+ + +
Sbjct: 203 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQ 262
Query: 274 -NGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 331
+ F GE ++ L+++ G+A W + +
Sbjct: 263 KGIEV-FCGEMGA---YNKTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFGILDSER 317
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 164 bits (416), Expect = 2e-48
Identities = 51/288 (17%), Positives = 93/288 (32%), Gaps = 28/288 (9%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
W I DE F + G + VRIP+ W PP + K +D + A K G+
Sbjct: 29 DWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGL 88
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 177
V++++H N E R +A+ +A RY + P E++N
Sbjct: 89 AVVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILN 135
Query: 178 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-SNRLGPADHKELLSFASGLSRVVID 236
P + + +R +I+ + G E LS ++
Sbjct: 136 APHGNLTP-EKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVT 194
Query: 237 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV------- 289
+HYYN F G + + ++ F+ EW+ +
Sbjct: 195 IHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEF 254
Query: 290 ---KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE---ANHWSLKW 331
+ A + ++ + + + + AYW + W
Sbjct: 255 GAYRKADLESRIKWTSFVVREMEKRRWSLAYWEFCSGFGVYDTLRKTW 302
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 144 bits (364), Expect = 9e-41
Identities = 59/329 (17%), Positives = 100/329 (30%), Gaps = 40/329 (12%)
Query: 24 DPSVFKLNIVSTLRGEYQITNGF---GPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVR 80
D SV ++ S I +G +AP + W YI DE FK + G ++VR
Sbjct: 2 DQSVSNVDKSSAFEYNKMIGHGINMGNALEAPV--EGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 81 IPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140
IP+ W P + + D A K + VI++ H
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFE------------- 106
Query: 141 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 200
+ D V + +A + + P E+ NEP Y +
Sbjct: 107 ELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQNLTP-TKWNELYPKVLGEI 165
Query: 201 RKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL---------- 250
RK + VI+ +++ HYY F+ G
Sbjct: 166 RKTNPSRIVIIDVPNWSNYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIG 225
Query: 251 ----NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLD 306
++ + N +N P+ F+GE+ A + ++
Sbjct: 226 VKWEGKDWEVEQIRNHFKYVSEWAKKNNVPI-FLGEFGAYSK---ADMESRVKWTKTVRR 281
Query: 307 VYGRATFGWAYWAHKCE---ANHWSLKWM 332
+ F AYW + W+ W+
Sbjct: 282 IAEEFGFSLAYWEFCAGFGLYDRWTKTWI 310
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 3e-30
Identities = 52/312 (16%), Positives = 94/312 (30%), Gaps = 40/312 (12%)
Query: 31 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDS-YITDEDFKFLSSNGINAVRIPVGWWIAN 89
N+ +T+ + + D+ + W + T++ FK L N N RIP W
Sbjct: 32 NLGNTMDAQCIEYLNYEKDQTAS--ETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHF 89
Query: 90 DPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN 149
P K + D+ K G VI++LH H F E D+
Sbjct: 90 GEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLH----------HETWNHAFSETLDTA 139
Query: 150 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDA 199
+ +A + + E +NEP D + +
Sbjct: 140 KEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKT 199
Query: 200 VRKY---TSTAYVIMSNRLGPADHKELLSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ 254
VR ++++ + +F +V+ VH Y + NF N +
Sbjct: 200 VRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPY--NFALNNGEG 257
Query: 255 NIDYVNNQRASDLGAVT-------TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDV 307
+D + DL G +GE+ + + + F ++
Sbjct: 258 AVDKFDAAGKRDLEWNINLMKKRFVDQGIPMILGEYGAMNRDNEEDRATWAEFYMEKVTA 317
Query: 308 YGRATFGWAYWA 319
G +W
Sbjct: 318 MG---VPQIWWD 326
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 1e-29
Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 37/285 (12%)
Query: 46 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 105
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 106 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDF---LAA 162
+ + G +VD H + + +S ++ F +A+
Sbjct: 75 IATVNAITQKGAYAVVDPHN----------------YGRYYNSIISSPSDFETFWKTVAS 118
Query: 163 RYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRL 215
++A+ P + + NE + + +A D +R +T+ I
Sbjct: 119 QFASNPLV-IFDTDNEYHDMDQT--LVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWT 175
Query: 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 275
+ + S +++ ++H Y ++ +G + + +R + +NG
Sbjct: 176 WTNVNDNMKSLTDPSDKIIYEMHQY--LDSDGSGTSATCVSSTIGQERITSATQWLRANG 233
Query: 276 PLTFVGEWTCEWNVKDASK-QDYQRFANAQLDVYGRATFGWAYWA 319
+GE+ + + + DV+ G +WA
Sbjct: 234 KKGIIGEFAGGADNVCETAITGMLDYMAQNTDVW----TGAIWWA 274
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-28
Identities = 55/319 (17%), Positives = 102/319 (31%), Gaps = 54/319 (16%)
Query: 35 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 94
+ G N FG + V+ W + S G N +R+P I T P
Sbjct: 22 RIAG----INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMP 76
Query: 95 KPFVGGSS----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144
+V+D +A + G+++I+D H S
Sbjct: 77 NSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSA----------L 126
Query: 145 WGDS--NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDT-----LKSYYKAGY 197
W S + A ++ + LA RY P++ +L NEP P + +
Sbjct: 127 WYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAG 186
Query: 198 DAVRKYTSTAYVIM--------------SNRLGPADHKELLSFASGLSRVVIDVHYYNLF 243
+AV + + N G + +L+ +R+V H Y
Sbjct: 187 NAVLSVNPNLLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVP---NRLVYSAHDYATS 243
Query: 244 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANA 303
+ + + + G + N ++GE+ ++ + Q + +
Sbjct: 244 VYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFG--TTLQSTTDQTWLKTLVQ 301
Query: 304 QLDV---YGRATFGWAYWA 319
L YG +F W +W+
Sbjct: 302 YLRPTAQYGADSFQWTFWS 320
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 111 bits (278), Expect = 7e-28
Identities = 51/305 (16%), Positives = 86/305 (28%), Gaps = 42/305 (13%)
Query: 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV 121
+T E K + + G ++RIPV + P + D+A G+ VI+
Sbjct: 69 TVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVII 128
Query: 122 DLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181
++H + + V +A +++N E +NE
Sbjct: 129 NIHGDGYNSVQGGWL---LVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFD 185
Query: 182 PG------VALDTLKSYYKAGYDAVRK----------------YTSTAYVIMSNRLGPAD 219
L +Y + D VR+ V P D
Sbjct: 186 GNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTD 245
Query: 220 HKELLSFASGLSRVVIDVHYYN--LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 277
+ + S R++I HYY+ F+ NG Q N + S G
Sbjct: 246 NYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQF 305
Query: 278 T-------------FVGEWTCEWNVKDASKQDYQR--FANAQLDVYGRATFGWAYWAHKC 322
+GE+ S + R +A A + YW +
Sbjct: 306 KSMYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGH 365
Query: 323 EANHW 327
H
Sbjct: 366 NGQHG 370
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 106 bits (265), Expect = 2e-26
Identities = 45/301 (14%), Positives = 86/301 (28%), Gaps = 35/301 (11%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+ + T + G N +R+PV W P K ++ ++A
Sbjct: 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND 96
Query: 117 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 176
+ VI++LH + A V +A + E +
Sbjct: 97 MYVIINLHHENEWLKPFYAN---------EAQVKAQLTKVWTQIANNFKKYGDHLIFETM 147
Query: 177 NEPLAPGV----------ALDTLKSYYKAGYDAVRK---YTSTAYVIMSNRLGPADHKEL 223
NEP G + + Y +A+R +T Y+++ A +
Sbjct: 148 NEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVPTLAASAMSTTI 207
Query: 224 LSFASGL--SRVVIDVHYYNLFSNNFNGLNVQQ-NIDYVNNQRASDLGAVTT---SNGPL 277
S+V++ +H Y+ + + DY + S+ AV NG
Sbjct: 208 NDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVKNGRA 267
Query: 278 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENGY 337
+GE A++ + + G +W + G
Sbjct: 268 VVIGEMGSINKNNTAARVTHAEYYAKSAKARG---LTPIWWD----NGYSVAGKAETFGI 320
Query: 338 I 338
Sbjct: 321 F 321
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-26
Identities = 43/265 (16%), Positives = 83/265 (31%), Gaps = 40/265 (15%)
Query: 58 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+ Y+ + K+L + GI R + P + A + A++ G
Sbjct: 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVK-----NKVKEAVEAAKELG 118
Query: 117 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 176
+ VI+D H + N +++ Y N P++ E+
Sbjct: 119 IYVIIDWHILNDGNP---------------NQNKEKAKEFFKEMSSLYGNTPNV-IYEIA 162
Query: 177 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 236
NEP +K Y + +RK +I+ D + + V+
Sbjct: 163 NEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYA 222
Query: 237 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296
+H+Y +G ++ +Y ++ A P+ FV EW + +
Sbjct: 223 LHFY----AGTHGQFLRDKANYALSKGA-----------PI-FVTEWG--TSDASGNGGV 264
Query: 297 YQRFANAQLDVYGRATFGWAYWAHK 321
+ + L T W W
Sbjct: 265 FLDQSREWLKYLDSKTISWVNWNLS 289
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 46/275 (16%), Positives = 93/275 (33%), Gaps = 37/275 (13%)
Query: 57 DHWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKY 115
+D +TD L+ + + +R+ + T P+ G + + D A
Sbjct: 37 QWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPR----GFTDRMHQLIDMATAR 92
Query: 116 GVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIEL 175
G+ VIVD H N+ +A R+A++ ++ E+
Sbjct: 93 GLYVIVDWHILTPGDPH---------------YNLDRAKTFFAEIAQRHASKTNV-LYEI 136
Query: 176 INEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI-MSNRLGPADHKELLSFASGLSRVV 234
NEP GV+ ++KSY + +R+ + +I + E A + V
Sbjct: 137 ANEPN--GVSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSLGVSEGSGPAEIAANPV 194
Query: 235 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK 294
+ F +F + + N + + P+ FV E+
Sbjct: 195 NASNIMYAF--HFYAASHRDNYLNALREASELF--------PV-FVTEFG--TETYTGDG 241
Query: 295 QDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 329
+ + A+ +D+ GW W + + ++
Sbjct: 242 ANDFQMADRYIDLMAERKIGWTKWNYSDDFRSGAV 276
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 5e-25
Identities = 49/302 (16%), Positives = 99/302 (32%), Gaps = 34/302 (11%)
Query: 31 NIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIAND 90
+ T G + + P + + F++ +G+ R+PVGW +
Sbjct: 14 DFGCTTDGTCVTSKVYPP--LKNFTGSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVN 71
Query: 91 PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 150
S D G IVD+H NG G
Sbjct: 72 NNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNY-ARWNGGIIG--------QGGPTN 122
Query: 151 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 210
A ++ LA++YA++ + ++NEP V ++T + + A+R +T+ I
Sbjct: 123 AQFTSLWSQLASKYASQSRV-WFGIMNEPH--DVNINTWAATVQEVVTAIRNAGATSQFI 179
Query: 211 M-------SNRLGPADH-----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDY 258
S +D ++ + + ++ DVH Y ++ +G + + +
Sbjct: 180 SLPGNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKY--LDSDNSGTHAECTTNN 237
Query: 259 VNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAY 317
++ + + +N + E ++ N DVY G+
Sbjct: 238 IDGAFSPLATWLRQNNRQA-ILTETGGGNVQSCIQDMCQQIQYLNQNSDVY----LGYVG 292
Query: 318 WA 319
W
Sbjct: 293 WG 294
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 1e-23
Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 41/265 (15%)
Query: 59 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
+ ++ E K+L + GIN R + P + + A + A +
Sbjct: 40 YGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLDI 94
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 177
VI+D H + + + D ++ Y + P++ E+ N
Sbjct: 95 YVIIDWHILSDNDP---------------NIYKEEAKDFFDEMSELYGDYPNV-IYEIAN 138
Query: 178 EPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 236
EP V + +K Y + +R +I+ D V+
Sbjct: 139 EPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYA 198
Query: 237 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296
H+Y +G N++ +DY +Q A + FV EW +
Sbjct: 199 FHFY----AGTHGQNLRDQVDYALDQGA-----------AI-FVSEWG--TSAATGDGGV 240
Query: 297 YQRFANAQLDVYGRATFGWAYWAHK 321
+ A +D WA W+
Sbjct: 241 FLDEAQVWIDFMDERNLSWANWSLT 265
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 91.8 bits (228), Expect = 2e-21
Identities = 32/270 (11%), Positives = 75/270 (27%), Gaps = 47/270 (17%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
H + F + S+G N VR+ + + P + N ++ +
Sbjct: 28 HNWYPQHTQAFADIKSHGANTVRVVLSNGVRWSKNGPS--------DVANVISLCKQNRL 79
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 177
++++H G + S W + L + I + N
Sbjct: 80 ICMLEVHDTTGYGEQSGASTLDQAVDYWIE------------LKSVLQGEEDYVLINIGN 127
Query: 178 EPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI-------MSNRLGPADHKELLSFASG 229
EP + + A +R ++ ++ + + +
Sbjct: 128 EPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDP 187
Query: 230 LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289
V +H Y ++S + +++ N PL +G E+
Sbjct: 188 TGNTVFSIHMYGVYS---QASTITSYLEHFVNA-----------GLPL-IIG----EFGH 228
Query: 290 KDASKQDYQRFANAQLDVYGRATFGWAYWA 319
+ + A+ + GW++
Sbjct: 229 DHSDGNPDEDTIMAEAERLKLGYIGWSWSG 258
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 92.1 bits (228), Expect = 4e-21
Identities = 46/310 (14%), Positives = 89/310 (28%), Gaps = 43/310 (13%)
Query: 43 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 102
NG T + + G N VRIPV W
Sbjct: 42 FNGTNITNELDYETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWM 100
Query: 103 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAA 162
+ ++ + VI++ H G S+ S+ +V +AA
Sbjct: 101 NRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYM------ASSKKYITSVWAQIAA 154
Query: 163 RYANRPSLAAIELINEPLAPGV---------------ALDTLKSYYKAGYDAVRKY--TS 205
R+AN E +NEP G +++ + + + VR +
Sbjct: 155 RFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKN 214
Query: 206 TAYVIM-------SNRLGPADHKELLSFASGLSRVVIDVHYYN--LFSNNFNGLNVQQNI 256
+ +M + + + +++++ VH Y F+
Sbjct: 215 ASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAW 274
Query: 257 DYVNNQRASDLGAVT-------TSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYG 309
+ +++ S++ TS G +GE ++ +Y + AQ G
Sbjct: 275 NINDSKDQSEVTWFMDNIYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARG 334
Query: 310 RATFGWAYWA 319
W
Sbjct: 335 ---ILCILWD 341
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 89.5 bits (222), Expect = 1e-20
Identities = 38/264 (14%), Positives = 76/264 (28%), Gaps = 42/264 (15%)
Query: 60 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
VI+D H+ + A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHEAHTDQ------------------ATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 238
PL + +K Y + D +R +++ D + + +H
Sbjct: 136 PLQISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQDY 297
+Y +G + + + L F EW T + +
Sbjct: 195 FY----AGTHGQSYRNKAQTALDNGI-----------AL-FATEWGTVNADGNGGVNINE 238
Query: 298 QRFANAQLDVYGRATFGWAYWAHK 321
+A + + A WA
Sbjct: 239 ---TDAWMAFFKTNNISHANWALN 259
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 89.1 bits (221), Expect = 2e-20
Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 53/267 (19%)
Query: 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
W ++ G N +RI + + + + AE+ +
Sbjct: 28 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TIREVIELAEQNKMV 79
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
+V++H A G + ++ + D + E + + I + NE
Sbjct: 80 AVVEVHDATGRDSRSDLNRAVDYWIE---------------MKDALIGKEDTVIINIANE 124
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 232
Y +R T +++ D+ + + A L
Sbjct: 125 WY-GSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 183
Query: 233 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 292
+ +H Y + V+ NID V +Q + L +GE+ D
Sbjct: 184 TMFSIHMYE--YAGGDANTVRSNIDRVIDQ-----------DLAL-VIGEFGHRHTDVD- 228
Query: 293 SKQDYQRFANAQLDVYGRATFGWAYWA 319
+ L GW W+
Sbjct: 229 --------EDTILSYSEETGTGWLAWS 247
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 87.6 bits (217), Expect = 5e-20
Identities = 43/266 (16%), Positives = 83/266 (31%), Gaps = 44/266 (16%)
Query: 58 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+ + T + L + + VR +G + G+ ++ D A
Sbjct: 34 GGEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIAND 90
Query: 117 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 176
+ I+ H+ N ++ + +A +Y N+P++ E+
Sbjct: 91 MYAIIGWHSHSAEN------------------NRSEAIRFFQEMARKYGNKPNV-IYEIY 131
Query: 177 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 236
NEPL + +T+K Y +A A+R +I+ + E +
Sbjct: 132 NEPLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYT 190
Query: 237 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW-TCEWNVKDASKQ 295
+H+Y +G +++ N L FV EW T + Q
Sbjct: 191 LHFY----AGTHGESLRNKARQALNN-----------GIAL-FVTEWGTVNADGNGGVNQ 234
Query: 296 DYQRFANAQLDVYGRATFGWAYWAHK 321
+A + A WA
Sbjct: 235 TE---TDAWVTFMRDNNISNANWALN 257
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 89.1 bits (220), Expect = 8e-20
Identities = 46/331 (13%), Positives = 91/331 (27%), Gaps = 62/331 (18%)
Query: 36 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPK 95
L G N FG + V+ W ++ + S G NA+R+P T P
Sbjct: 63 LFG----VNWFGFETPNHVVHGLWKRNW-EDMLLQIKSLGFNAIRLPFCTESVKPGTQPI 117
Query: 96 -------PFVGGSS--KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG 146
P + G ++++ A G+ V++D H + +
Sbjct: 118 GIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI--------EPLWYTE 169
Query: 147 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDT-----------------L 189
D + D + +A R+ ++ +L NEP +
Sbjct: 170 DFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDW 229
Query: 190 KSYYKAGYDAVRKYTSTAYVIMS-------------------NRLGPADHKELLSFASGL 230
+ A+ K + + G +
Sbjct: 230 NLAAERIGKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPR 289
Query: 231 SRVVIDVHYYN-LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289
+++V H + N + D + + G V G +GE+ ++
Sbjct: 290 NKLVYSPHVFGPDVYNQPYFGPAKGFPDNLPDIWYHHFGYVKLELGYSVVIGEFGGKYG- 348
Query: 290 KDASKQDYQRFANAQLDVYGRAT-FGWAYWA 319
+ N +D + YW+
Sbjct: 349 -HGGDPRDVIWQNKLVDWMIENKFCDFFYWS 378
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 87.7 bits (217), Expect = 1e-19
Identities = 40/284 (14%), Positives = 81/284 (28%), Gaps = 51/284 (17%)
Query: 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
W ++ G N +RI + + + + AE+ +
Sbjct: 51 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDDID--------TVREVIELAEQNKMV 102
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
+V++H A G + ++ D + E + + I + NE
Sbjct: 103 AVVEVHDATGRDSRSDLDRAVDYWIE---------------MKDALIGKEDTVIINIANE 147
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 232
Y +R T +++ D+ + + A L
Sbjct: 148 WY-GSWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 206
Query: 233 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 292
+ +H Y + V+ NID V +Q + L +GE+ D
Sbjct: 207 TIFSIHMYE--YAGGDANTVRSNIDRVIDQ-----------DLAL-VIGEFGHRHTDGDV 252
Query: 293 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 336
+ ++ GW W+ K + W + E+
Sbjct: 253 DEDTILSYSEET-------GTGWLAWSWKGNSAEWDYLDLSEDW 289
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 85.4 bits (210), Expect = 1e-18
Identities = 56/343 (16%), Positives = 102/343 (29%), Gaps = 72/343 (20%)
Query: 35 TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPP 94
LRG N K+ D + + + + G N VR + W P
Sbjct: 46 ILRG----FNTASSAKSAP---DGMPQFTEADLAREYADMGTNFVRFLISWRSVEPA--P 96
Query: 95 KPFVGGSSKVLDNAFDWAEKYGVKVIVDLH-------AAPGSQNGNEHSATRDGFQEW-- 145
+ +++ W + G KV++D+H P +GN A +G W
Sbjct: 97 GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWAT 156
Query: 146 -----------------------------------GDSNVADTVAVIDFLAARYANRPSL 170
V +A R+A+ ++
Sbjct: 157 YMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAV 216
Query: 171 AAIELINEPLA-----PGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPAD 219
A +L+NEP P L + Y+ DA+R+ +V + N+ P+
Sbjct: 217 VAYDLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSG 276
Query: 220 HKELLSFASGLSRVVIDVHYYNL---FSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP 276
++ +G R+ H Y L + GL ++ RA+
Sbjct: 277 LTKIDDPRAGQQRIAYCPHLYPLPLDIGDGHEGLARTLTDVTIDAWRANTAHTARVLGDV 336
Query: 277 LTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 319
+G + D + + + G +YW+
Sbjct: 337 PIILGSFGL-----DTTLPGARDYIERVYGTAREMGAGVSYWS 374
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 4e-18
Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 36/274 (13%)
Query: 59 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 50 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 104
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI--EL 175
VIVD H + + F + + +A Y + P I EL
Sbjct: 105 YVIVDWHVHAPGDPRADVYSGAYDF--FEE------------IADHYKDHPKNHYIIWEL 150
Query: 176 INEPLAPG----------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS 225
NEP + +K Y + + +R+ ++ +
Sbjct: 151 ANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSAD 209
Query: 226 FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 285
++ VH+Y + + + +++ + + F EW
Sbjct: 210 NPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEWG- 267
Query: 286 EWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 319
+ + Y A+ L+ + WA W+
Sbjct: 268 -TSQANGDGGPYFDEADVWLNFLNKHNISWANWS 300
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 82.5 bits (203), Expect = 1e-17
Identities = 39/277 (14%), Positives = 78/277 (28%), Gaps = 48/277 (17%)
Query: 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
W + +++ G N VRI + + + N AE +
Sbjct: 36 WYKDQATTAIEGIANTGANTVRIVLSDGGQWTKDDIQ--------TVRNLISLAEDNNLV 87
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
++++H A G + + D + E + + + I + NE
Sbjct: 88 AVLEVHDATGYDSIASLNRAVDYWIE---------------MRSALIGKEDTVIINIANE 132
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFASGLSR 232
YK +R +++ D+ + A
Sbjct: 133 WFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRN 191
Query: 233 VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 292
+ +H Y N V+ NID V NQ L +GE+ D
Sbjct: 192 TMFSIHMYE--YAGGNASQVRTNIDRVLNQDL-----------AL-VIGEFGHRHTNGDV 237
Query: 293 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 329
+ ++ + + W++ + E + L
Sbjct: 238 DESTIMSYSEQRGVGW----LAWSWKGNGPEWEYLDL 270
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 77.8 bits (191), Expect = 3e-16
Identities = 17/141 (12%), Positives = 42/141 (29%), Gaps = 10/141 (7%)
Query: 44 NGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFV 98
+ D ++ + + S+G N+VR+ + + P
Sbjct: 29 VNYARDFGHNQYSKGKSTF--ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGID 86
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
+ A+++ + + L Q+ H + + +
Sbjct: 87 NTLISDMRAYLHAAQRHNILIFFTLWNGAVKQST--HYRLNGLMVDTRKLQ-SYIDHALK 143
Query: 159 FLAARYANRPSLAAIELINEP 179
+A N +L +++NEP
Sbjct: 144 PMANALKNEKALGGWDIMNEP 164
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Length = 491 | Back alignment and structure |
|---|
Score = 73.2 bits (178), Expect = 2e-14
Identities = 38/287 (13%), Positives = 77/287 (26%), Gaps = 39/287 (13%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
W + + + G NAV + + P P G + +D + + G+
Sbjct: 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGL 94
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELIN 177
+++ + + N N RD ++ A RYA + E+ N
Sbjct: 95 YLVITIGNGANNGNHN-AQWARDFWKF---------------YAPRYAKETHV-LYEIHN 137
Query: 178 EPLAPG-------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 230
EP+A G Y +R Y V++ + G
Sbjct: 138 EPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGG-------KGGA 190
Query: 231 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT--TSNGPLTFVGEWTCEWN 288
+ + D+ +N +N + N A A T+ + +
Sbjct: 191 AEALKDIRAFNKAVFGN------ENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFM 244
Query: 289 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIEN 335
+ A +++ W + +
Sbjct: 245 TEYAGGAWGSGMGGLDVELTYELERLGVSWLTFQYIPPTGVSDDVTK 291
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 67.1 bits (163), Expect = 1e-12
Identities = 42/276 (15%), Positives = 81/276 (29%), Gaps = 28/276 (10%)
Query: 65 DEDFKFLSSNGINAVRIPV-------------GWWIANDPTPPKPFVGGSSKVLDNAFDW 111
D F +SS+G+ VR+ + + + LD
Sbjct: 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQS 98
Query: 112 AEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE---WGDSNV-ADTVAVIDFLAARYANR 167
AE++ +K+I+ G G + ++ + + +RYAN
Sbjct: 99 AEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRKYVQAVVSRYANS 158
Query: 168 PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV-IMSNRLGPADHKELLSF 226
++ A EL NEP G + D + + + V+ S V + LG + +
Sbjct: 159 TAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPY 218
Query: 227 ASGLSRVVIDVHYYN---LFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 283
G + + + N + N + A + P
Sbjct: 219 TYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGNGWIQTHAAACLAAGKPC-----V 273
Query: 284 TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 319
E+ + + + L G G +W
Sbjct: 274 FEEYGAQQNPCTNEAPWQTTSLTTRGMG--GDMFWQ 307
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Length = 399 | Back alignment and structure |
|---|
Score = 56.0 bits (134), Expect = 5e-09
Identities = 47/248 (18%), Positives = 78/248 (31%), Gaps = 35/248 (14%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLD--NAFDWAEKY 115
+ +S + FK L G+N VR+ + W + GG++ + A
Sbjct: 44 YNESGKKQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIGKRATAN 101
Query: 116 GVKVIVDLH-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVA--VIDFLAARYANRP 168
G+K++ D H A P Q + A + + + L A A
Sbjct: 102 GMKLLADFHYSDFWADPAKQKAPKAWANLNF------EDKKTALYQYTKQSLKAMKAAGI 155
Query: 169 SLAAIELINEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS 225
+ +++ NE LA + + AG AVR+ S V + P
Sbjct: 156 DIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYAW 214
Query: 226 FASGLSRV-----VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 280
A L R V YY + N+ + V + + TS
Sbjct: 215 IAETLHRHHVDYDVFASSYYPFWHGTLK--NLTSVLTSVADTYGKKVMVAETSYT----- 267
Query: 281 GEWTCEWN 288
+T E
Sbjct: 268 --YTAEDG 273
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 50.3 bits (119), Expect = 4e-07
Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 42/301 (13%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 114
D F+ S +N R + P P V + LD A+K
Sbjct: 37 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 96
Query: 115 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD----------TVAVIDFLAAR- 163
YG+ +I+ L + G + + ++ D + + R
Sbjct: 97 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 156
Query: 164 -------YANRPSLAAIELINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVI----- 210
Y + P++ + ELINEP P ++ T +++ ++ S +
Sbjct: 157 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 216
Query: 211 ----MSNRLGPADHKELLSFASGLSRVVIDV---HYYNLFSNNFNGLNVQQNIDYVNNQR 263
+ P + +F S ID H Y + GL + + +
Sbjct: 217 FYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYP--NQWLPGLTQEAQDKWASQWI 274
Query: 264 ASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVY------GRATFGWAY 317
+ PL + E+ + + G G +
Sbjct: 275 QVHIDDSKMLKKPL-LIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLF 333
Query: 318 W 318
W
Sbjct: 334 W 334
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 50.4 bits (119), Expect = 4e-07
Identities = 36/315 (11%), Positives = 76/315 (24%), Gaps = 54/315 (17%)
Query: 56 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDN 107
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 56 NEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDY 115
Query: 108 AFDWAEKYGVKVIVDLH-------------AAPGSQNGNEHSATRDGFQEWGDSNVADTV 154
K + V++ + A + + + T + S
Sbjct: 116 LLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRS 175
Query: 155 AVI----------------DFLAARYANRPSLAAIELINEPLAPGVA-----LDTLKSYY 193
Y + ++ + +L NEP +
Sbjct: 176 EKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWV 235
Query: 194 KAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID---VHYY----NLFSNN 246
A ++ + V + ++ F + ID H + + F
Sbjct: 236 HAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKT 295
Query: 247 FNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLD 306
+ N + + N PL E+ + D
Sbjct: 296 KPAETWPSAWEKAQNYMRAHIDVAKQLNKPL-----VLEEFGLDRDMGSYAMDSTTEYRD 350
Query: 307 VYGRATFGWAYWAHK 321
Y R F + +
Sbjct: 351 NYFRGVFELMLASLE 365
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Length = 334 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 8e-06
Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 45/272 (16%)
Query: 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 123
T L+ GIN++R V W+ P L+ A + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV--WV-----NPSDGSYDLDYNLELA-KRVKAAGMSLYLDL 80
Query: 124 H-----AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
H A P Q +T D + + + N + I + NE
Sbjct: 81 HLSDTWADPSDQTTPSGWSTTDLGTLKWQ--LYNYTL--EVCNTFAENDIDIEIISIGNE 136
Query: 179 -------PLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNRLGPADHKELLSFASGL 230
PL + + + +G V+ +T IM + + F +
Sbjct: 137 IRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETV 196
Query: 231 SRV---------VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 281
V YY +S + +++ ++ + + + V
Sbjct: 197 LATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPV-----------VVV 245
Query: 282 EWTCEWNVKDASKQDYQRFANAQLDVYGRATF 313
E + + + ++ V G+ F
Sbjct: 246 ETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEF 277
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 43.0 bits (100), Expect = 1e-04
Identities = 39/309 (12%), Positives = 86/309 (27%), Gaps = 53/309 (17%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------------- 102
+ + + D + GI +RI + ++
Sbjct: 39 YKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNG 98
Query: 103 -KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE------HSATRDGF------QEWGDSN 149
+ LD A++ G+K+I+ L G D F +E
Sbjct: 99 FERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKY 158
Query: 150 VADTVA-VIDFLAARYANRPSLAAIELINEP-LAPGVALDTLKSYYKAGYDAVRKYTSTA 207
V+ + V + Y P++ A EL NE + +TL + K ++
Sbjct: 159 VSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNH 218
Query: 208 YVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDL 267
V + + ++++ + + Y ++ L + +D+
Sbjct: 219 LVAVGDEGFFSNYEGFKPYGGEA-----EWAYNGWSGVDWKKLLSIETVDFGTFHLYPS- 272
Query: 268 GAVTTSNGPLTFVGEWTC----------------EWNVKDASKQDYQRFANAQLD-VYGR 310
+ + +W E+ + ++ + D VY
Sbjct: 273 HWGVSPENYAQWGAKWIEDHIKIAKEIGKPVVLEEYGIPKSAPVNRTAIYRLWNDLVYDL 332
Query: 311 ATFGWAYWA 319
G +W
Sbjct: 333 GGDGAMFWM 341
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 5e-04
Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 19/154 (12%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+HW ED + + G++ VRI W +P P + G LD A G
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG----WLDEAIATLAAEG 64
Query: 117 VKVIVDLH--------------AAPGSQNGN-EHSATRDGFQEWGDSNVADTVAVIDFLA 161
+KV++ P + G R + + ++ LA
Sbjct: 65 LKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLA 124
Query: 162 ARYANRPSLAAIELINEPLAPGVALDTLKSYYKA 195
RY ++A + NE +A
Sbjct: 125 ERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEA 158
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 100.0 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 100.0 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 100.0 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 100.0 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 100.0 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 100.0 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 100.0 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 100.0 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 100.0 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 100.0 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 100.0 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.97 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.96 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.95 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.95 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.95 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.94 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.91 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.88 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.88 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.87 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.87 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.87 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.86 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.86 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.86 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.86 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.85 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.85 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.84 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.84 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.84 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.83 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.82 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.81 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.8 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.79 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.79 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.78 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.75 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 99.72 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.71 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.7 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.7 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 99.7 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 99.69 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 99.69 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 99.69 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 99.68 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 99.68 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 99.68 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 99.67 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 99.67 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 99.66 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 99.65 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.65 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.65 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 99.65 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 99.65 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 99.65 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 99.64 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 99.63 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.61 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.6 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.6 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.59 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.57 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.56 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.54 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.45 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.44 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.4 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.34 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.3 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.28 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.26 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.25 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.24 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.24 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 99.23 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.22 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 99.2 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.19 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 99.17 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.16 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.16 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 99.15 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 99.14 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 99.13 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.08 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 99.08 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.05 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 99.04 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 98.95 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.93 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.9 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.86 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 98.84 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.77 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.74 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.72 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.69 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.67 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.65 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.62 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.49 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 98.44 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 98.38 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.35 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 98.31 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.31 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 98.24 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 98.22 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 98.21 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 98.06 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.94 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 97.65 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 97.54 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 97.43 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 97.42 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 97.37 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 97.34 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 97.29 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 97.23 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 97.21 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 97.13 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 97.05 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 96.93 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 96.9 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 96.75 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 96.72 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 96.67 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 96.64 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 96.54 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 96.53 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 96.5 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 96.45 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 96.41 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 96.31 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 96.29 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 96.26 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 96.1 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 96.08 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 96.04 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 96.0 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 95.99 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 95.95 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 95.91 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 95.62 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 95.49 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 95.47 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 95.24 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 94.84 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 94.83 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 94.65 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 94.61 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 94.58 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 94.55 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 94.53 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 94.52 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 94.4 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 94.33 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 94.28 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 94.23 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 94.22 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 94.13 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 94.1 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 94.1 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 94.04 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 94.03 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 93.98 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 93.96 | |
| 2ddx_A | 333 | Beta-1,3-xylanase; glycoside hydrolase, TIM barrel | 93.9 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 93.85 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 93.77 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 93.75 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 93.71 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 93.67 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 93.54 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 93.48 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 93.36 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 93.34 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 93.23 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 93.23 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 93.2 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 93.16 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 93.14 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 92.94 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 92.85 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 92.84 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 92.83 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 92.53 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 92.51 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 92.47 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 92.44 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 92.19 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 91.95 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 91.95 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 91.82 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 91.79 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 91.26 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 91.22 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 90.94 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 90.73 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 90.25 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 89.66 | |
| 1yht_A | 367 | DSPB; beta barrel, hydrolase; 2.00A {Aggregatibact | 88.28 | |
| 1olt_A | 457 | Oxygen-independent coproporphyrinogen III oxidase; | 87.81 | |
| 1w0m_A | 226 | TIM, triosephosphate isomerase; glycolysis, glucon | 87.58 | |
| 3ngf_A | 269 | AP endonuclease, family 2; structural genomics, se | 86.54 | |
| 1hg3_A | 225 | Triosephosphate isomerase; thermostability, tetram | 86.18 | |
| 2yfo_A | 720 | Alpha-galactosidase-sucrose kinase agask; hydrolas | 85.4 | |
| 2v5d_A | 737 | O-GLCNACASE NAGJ; family 32 carbohydrate binding m | 85.21 | |
| 2p0o_A | 372 | Hypothetical protein DUF871; structural genomics, | 85.18 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 84.81 | |
| 3poh_A | 451 | Endo-beta-N-acetylglucosaminidase F1; TIM barrel, | 84.03 | |
| 2zxd_A | 455 | Alpha-L-fucosidase, putative; TIM barrel, hydrolas | 83.47 | |
| 1ydo_A | 307 | HMG-COA lyase; TIM-barrel protein, structural geno | 83.18 | |
| 4axn_A | 328 | Chitinase C1; hydrolase; 1.68A {Serratia marcescen | 82.06 | |
| 2v5c_A | 594 | O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrol | 81.8 | |
| 1x7f_A | 385 | Outer surface protein; structural genomics, unknow | 81.64 | |
| 1nvm_A | 345 | HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered | 81.17 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 80.16 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-61 Score=458.66 Aligned_cols=320 Identities=32% Similarity=0.570 Sum_probs=270.7
Q ss_pred eccCC-CCccc----CCccccccc-c----cCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcC
Q 019395 13 ADYGS-SSWDD----SDPSVFKLN-I----VSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 82 (341)
Q Consensus 13 ~~~~~-~~~~~----~~p~~f~~~-~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlp 82 (341)
..|.. |+|.. ++||+|+.+ + ...+.|||++++.+|.+++..++++||++|+|++||+.||++|+|+||||
T Consensus 14 ~rGVNlGgWlvlE~witps~f~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRip 93 (399)
T 3n9k_A 14 IRGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIP 93 (399)
T ss_dssp EEEEECTTSSSCCTTTSGGGTGGGCBTTBCTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEE
T ss_pred eeEEehhhhhccCCccCchhhhcccCccccCcccccHHHHHHHhCHHHHHHHHHHhhcccCcHHHHHHHHHcCCCEEEEc
Confidence 44556 88855 799999975 2 23578999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHH
Q 019395 83 VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLA 161 (341)
Q Consensus 83 i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la 161 (341)
|+||.+. +.++++|..+.+++||++|++|.++||+||||+|+.||++|+++++|.. +...|. +.++++++++|+.||
T Consensus 94 i~~~~~~-~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~iA 171 (399)
T 3n9k_A 94 IGYWAFQ-LLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLR-DSYNFQNGDNTQVTLNVLNTIF 171 (399)
T ss_dssp EEGGGTC-CCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSTTHHHHHHHHHHHHH
T ss_pred ccHHHcc-CCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCCCcccccccCCCCC-CCCCCCCHHHHHHHHHHHHHHH
Confidence 9999754 4445677767899999999999999999999999999999999888865 345677 778999999999999
Q ss_pred HHhCCC---CceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCC-CChhhhhhccCCCCcEEEEe
Q 019395 162 ARYANR---PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-ADHKELLSFASGLSRVVIDV 237 (341)
Q Consensus 162 ~~y~~~---~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~-~~~~~~~~~~~~~~~~v~~~ 237 (341)
+||+++ |.|++|||+|||..+..+.+.+++++++++++||+++|+++|++++++.+ ..+..++.....++|+||++
T Consensus 172 ~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~~~~~a~~~IR~~~p~~~Iii~dg~~~~~~W~~~l~~~~~~~nvv~d~ 251 (399)
T 3n9k_A 172 KKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVAEGQWNVVVDH 251 (399)
T ss_dssp HHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEE
T ss_pred HHhhcccCCCceEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCChHHHHhhcccccCCCCEEEEe
Confidence 999998 99999999999997545678999999999999999999999999988764 34556665434679999999
Q ss_pred eecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCC--------------------------
Q 019395 238 HYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD-------------------------- 291 (341)
Q Consensus 238 H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~-------------------------- 291 (341)
|+|.+|+..+..++.+++++.+|+.. .. +.+. ..|++||||+++.+.+.
T Consensus 252 H~Y~~f~~~~~~~~~~~~i~~~c~~~-~~---~~~~-~~~~ivGEwS~a~~dc~~~lng~~~g~r~~gt~~~~~~~g~c~ 326 (399)
T 3n9k_A 252 HHYQVFSGGELSRNINDHISVACNWG-WD---AKKE-SHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQ 326 (399)
T ss_dssp ECCSCSSHHHHTSCHHHHHHHHHHHH-HH---HHTC-SSEEEEEECCSCSSSCSTTTTCTTCCCTTBTCSTTCCBCCCSG
T ss_pred ccccCCCcccccCCHHHHHHHHHHHH-HH---HhcC-CCCEEEEecccccccchhhccCCCccccccccCCCCCcCCcCc
Confidence 99999987667788888999888643 22 2333 46799999998754210
Q ss_pred ----------CCHHHHHHHHHHHHHHHccCCCcEEEeccccCC-CCCChHHHHHCCCccc
Q 019395 292 ----------ASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 340 (341)
Q Consensus 292 ----------~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-~~W~~~~~~~~g~~~~ 340 (341)
..++.+++|.++|+++|++ +.||+|||||+|+ ++|||+++++.|+||+
T Consensus 327 ~~~~~~~~~~~~k~~~~~f~~aQ~~~~e~-~~Gw~fWtwK~e~~~~W~~~~~~~~g~~p~ 385 (399)
T 3n9k_A 327 PLLDISQWSDEHKTDTRRYIEAQLDAFEY-TGGWVFWSWKTENAPEWSFQTLTYNGLFPQ 385 (399)
T ss_dssp GGSSGGGCCHHHHHHHHHHHHHHHHHHHT-TTEEEESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred CcCccccccHHHHHHHHHHHHHHHHHHHc-CCcEEEeeeecCCCCCCCHHHHHhCCCcCC
Confidence 1245789999999999996 5599999999997 8999999999999985
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-57 Score=433.68 Aligned_cols=320 Identities=30% Similarity=0.546 Sum_probs=260.6
Q ss_pred eccCC-CCccc----CCcccccccccC------CcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 13 ADYGS-SSWDD----SDPSVFKLNIVS------TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 13 ~~~~~-~~~~~----~~p~~f~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
..|.. |+|.. ++|++|...+.. .++|||++++.+|.+++...+++||+++++++||+.||++|||+|||
T Consensus 13 ~rGvnlGgwlvlE~~i~p~~f~~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~~te~d~~~i~~~G~N~VRi 92 (408)
T 1h4p_A 13 IRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRI 92 (408)
T ss_dssp EEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEE
T ss_pred eeeeeccchhhcccccCchhhhhhcccccccccccccHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEc
Confidence 34556 88855 689999865531 26899999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCcccc-hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHH
Q 019395 82 PVGWWIANDPTPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDF 159 (341)
Q Consensus 82 pi~~~~~~~~~~~~~~~~~-~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~ 159 (341)
||+||.+. +.++.+|..+ .+++||++|++|+++||+||||+|+.||+||+++++|.. +...|. +.++++++++|+.
T Consensus 93 pi~~~~~~-~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~ 170 (408)
T 1h4p_A 93 PIGYWAFQ-ILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNY 170 (408)
T ss_dssp EEEGGGTC-CCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHH
T ss_pred cCCHHHcc-cCCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCC-CCCCCCCHHHHHHHHHHHHH
Confidence 99998664 4444567666 999999999999999999999999999999998888754 556687 7889999999999
Q ss_pred HHHHhCCC---CceeEEEeecCCCCCCCChHHHH-HHHHHHHHHHHhc-CCCceEEEeCCCCC-CChhhhhhccCCCCcE
Q 019395 160 LAARYANR---PSLAAIELINEPLAPGVALDTLK-SYYKAGYDAVRKY-TSTAYVIMSNRLGP-ADHKELLSFASGLSRV 233 (341)
Q Consensus 160 la~~y~~~---~~v~~~el~NEP~~~~~~~~~~~-~~~~~~~~aIR~~-~p~~~v~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (341)
||+||+++ |.|++|||+|||.....+.+.++ .|+++++++||++ +|+++|++++++.+ ..+..++......+|+
T Consensus 171 ia~ry~~~~y~~~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~~~~~~~nv 250 (408)
T 1h4p_A 171 ILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGV 250 (408)
T ss_dssp HHHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSE
T ss_pred HHHHHcccCCCCeEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEeeecccCchhhhhhccccCCCCCE
Confidence 99999998 99999999999996445678998 9999999999999 89888888876632 3345555433356799
Q ss_pred EEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-----------------------
Q 019395 234 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK----------------------- 290 (341)
Q Consensus 234 v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~----------------------- 290 (341)
|+++|.|.+|+......+.++.++.++.... . + ...+.|++|||||+..+.+
T Consensus 251 v~s~H~Y~~~~~~~~~~~~~~~i~~~~~~~~-~---~-~~~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~ 325 (408)
T 1h4p_A 251 TIDHHHYQVFASDQLERSIDEHIKVACEWGT-G---V-LNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQT 325 (408)
T ss_dssp EEEEEECSCSSHHHHTCCHHHHHHHHHHHHH-H---H-TTCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBC
T ss_pred EEEeeeccCCCCccccCCHHHHHHHHHHHHH-H---H-hhcCCCeEEEeccccccchHhhhcccccccccCCccccCccC
Confidence 9999999988654334455566666653321 1 1 2335689999999874311
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC-CCCChHHHHHCCCccc
Q 019395 291 -----------------DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 340 (341)
Q Consensus 291 -----------------~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-~~W~~~~~~~~g~~~~ 340 (341)
...++.+++|+++|+++|++.. ||+|||||+++ ++|||+.+++.|+||+
T Consensus 326 ~~~~~~c~~~~~~~~~~~~~k~~~~~~~~aq~~~~~~~~-Gw~fWt~K~e~~~~W~~~~~~~~g~~p~ 392 (408)
T 1h4p_A 326 SSYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFEMRG-GWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp CCBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHTTTT-EEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred CCccCcccCCCChhhccHHHHHHHHHHHHHHHHHHhhcC-CeEEEeEecCCCCCCCHHHHHHCCCCCC
Confidence 0123578899999999998655 99999999998 8999999999999995
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-40 Score=305.03 Aligned_cols=253 Identities=20% Similarity=0.354 Sum_probs=189.5
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
+||.++++++||+.||++|||+||||+.|+.+.+...++.++++.+++|+++|++|.++||+||||+|+.||++... .
T Consensus 23 ~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~--~ 100 (343)
T 1ceo_A 23 EHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQD--F 100 (343)
T ss_dssp HHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------
T ss_pred hhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccCC--C
Confidence 68999999999999999999999999999866544333467788999999999999999999999999998765321 1
Q ss_pred CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-
Q 019395 137 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR- 214 (341)
Q Consensus 137 g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~- 214 (341)
+ ....|. +..++++.++|+.|++||+++|.+++|||+|||+.. ..+.|..++++++++||+++|+++|++++.
T Consensus 101 ~---~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~ 175 (343)
T 1ceo_A 101 K---TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNN 175 (343)
T ss_dssp -----CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHH
T ss_pred C---cccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCCC
Confidence 1 113455 678999999999999999999999999999999963 357899999999999999999999999853
Q ss_pred CCCCChhhhhhc-cCCCCcEEEEeeecCCCCccccCccc-----------------------------------------
Q 019395 215 LGPADHKELLSF-ASGLSRVVIDVHYYNLFSNNFNGLNV----------------------------------------- 252 (341)
Q Consensus 215 ~~~~~~~~~~~~-~~~~~~~v~~~H~Y~~~~~~~~~~~~----------------------------------------- 252 (341)
|.+ ...+..+ +..++|+|+++|.|.|+. +++...
T Consensus 176 ~~~--~~~~~~~~~~~~~~~v~~~H~Y~~~~--ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~ 251 (343)
T 1ceo_A 176 YNS--PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNL 251 (343)
T ss_dssp HHC--GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTC
T ss_pred cCC--HHHHhhcCcCCCCCEEEEeeccCccc--cCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhcccc
Confidence 321 1222222 234678999999998742 111100
Q ss_pred hhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 253 QQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
.+..+.+...+ ..+..+.++.+.||+|||||+... .+.+...+|++++++.+++.++||++|+|+.++
T Consensus 252 ~~~~~~~~~~~-~~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~~ 319 (343)
T 1ceo_A 252 KLNKELLRKDL-KPAIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKKMD 319 (343)
T ss_dssp EESHHHHHHHH-HHHHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBSTT
T ss_pred ccCHHHHHHHH-HHHHHHHHHhCCCEEecccccccC---CChHHHHHHHHHHHHHHHHcCCCeEEeecCCCC
Confidence 00111111111 122234445577899999998663 355677899999999999999999999999754
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=300.36 Aligned_cols=251 Identities=16% Similarity=0.218 Sum_probs=188.5
Q ss_pred HH-hhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 58 HW-DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 58 ~~-~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
.| ++++|++||+.||++|||+|||||+|+.++++.++.+++++.+++|+++|++|.++||+||||+|+.++..+
T Consensus 37 ~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~~w~~----- 111 (345)
T 3ndz_A 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENEWLK----- 111 (345)
T ss_dssp TTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCTTTCC-----
T ss_pred CCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCcccccc-----
Confidence 35 467899999999999999999999998777665556788889999999999999999999999999975321
Q ss_pred CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----------ChHHHHHHHHHHHHHHHhc--
Q 019395 137 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKY-- 203 (341)
Q Consensus 137 g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~-- 203 (341)
...|. +..+++++++|+.||+||++++.+++|||+|||+.... ..+.+++++++++++||++
T Consensus 112 -----~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~i~aIR~~g~ 186 (345)
T 3ndz_A 112 -----PFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGG 186 (345)
T ss_dssp -----CSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred -----ccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHHHHHHHhcCC
Confidence 11233 67889999999999999999987888999999996321 1256789999999999999
Q ss_pred -CCCceEEEeCCCCCCChhhhhhccC--CCCcEEEEeeecCCCCccc--cC---ccchhhhHHHHhhhhhhhhhhhccCC
Q 019395 204 -TSTAYVIMSNRLGPADHKELLSFAS--GLSRVVIDVHYYNLFSNNF--NG---LNVQQNIDYVNNQRASDLGAVTTSNG 275 (341)
Q Consensus 204 -~p~~~v~~~~~~~~~~~~~~~~~~~--~~~~~v~~~H~Y~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
+|+++|++++...+++...+..+.. .++|+||++|+|.|+.... .. .......+.+...+ ..+..+.++++
T Consensus 187 ~np~~~Iiv~g~~~~~~~~~~~~~~~P~~~~n~v~s~H~Y~p~~f~~~~~g~~~w~~~~~~~~~~~~~-~~~~~~~~~~g 265 (345)
T 3ndz_A 187 NNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEF-DAVYNKFVKNG 265 (345)
T ss_dssp GGGTSCEEEECGGGCCSHHHHHHCCCGGGCTTEEEEEECCCSHHHHTCTTSCSCCCSHHHHHHHHHHH-HHHHHHTGGGT
T ss_pred CCCCcEEEECCCccCcccchhhcccCCCCCCcEEEEEEecCchhcccCCCCCcCCCCcccHHHHHHHH-HHHHHHHHHcC
Confidence 6789999986533334333433322 3789999999999863211 01 01111222333222 23334445567
Q ss_pred CceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 276 PLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 276 ~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
.||+|||||+... .+.+...+|++.+++.+++.++||++|+++.
T Consensus 266 ~pv~iGEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g~ 309 (345)
T 3ndz_A 266 RAVVIGEMGSINK---NNTAARVTHAEYYAKSAKARGLTPIWWDNGY 309 (345)
T ss_dssp CCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred CcEEEEeecCCCC---CCHHHHHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 8899999998653 3456667899999999999999999999963
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=301.48 Aligned_cols=250 Identities=20% Similarity=0.326 Sum_probs=188.6
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~ 140 (341)
++++++||+.||++|||+||||+.|+.+.++..+..++++.+++||++|++|.++||+||||+|+.|+.+. .++...
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~---~~~~~~ 111 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSV---NKEVEE 111 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEES---CTTSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCccc---ccCCCc
Confidence 67889999999999999999999998766543334677889999999999999999999999999987531 112111
Q ss_pred CccCCc-hhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCC---ChHHHHHHHHHHHHHHHhcCCCceEEEeCC-
Q 019395 141 GFQEWG-DSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR- 214 (341)
Q Consensus 141 ~~~~w~-~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~- 214 (341)
....|. +..++++.++|+.||+||+++ |.+++|||+|||..... +.+.+.+++++++++||+++|+++|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~ 191 (341)
T 1vjz_A 112 KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLG 191 (341)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCc
Confidence 234576 778999999999999999999 99999999999996432 347899999999999999999999999853
Q ss_pred CCCCChhhhhhccCCCCcEEEEeeecCCCCccccCc-------------------cchhhhHHHHhhhhhhhhhhhccCC
Q 019395 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGL-------------------NVQQNIDYVNNQRASDLGAVTTSNG 275 (341)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
|+. ..+..+ .++|+|+++|.|.|+....... ...+..+.+...+... ..+.+ .+
T Consensus 192 ~~~---~~~~~l--~~~n~v~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~-~~~~~-~g 264 (341)
T 1vjz_A 192 YGN---IPVDDL--TIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTW-IKLRQ-KG 264 (341)
T ss_dssp HHT---BCCTTC--CCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHH-HGGGG-GT
T ss_pred CCc---cccccc--CCCCeEEEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHH-HHHHH-hC
Confidence 221 112122 3689999999998764210000 0011122233322222 23444 57
Q ss_pred CceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 276 PLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 276 ~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.||+|||||+... .+.+...+|++.+++++++.++||++|+||++
T Consensus 265 ~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 309 (341)
T 1vjz_A 265 IEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 309 (341)
T ss_dssp CEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred CCeEEeccccccC---CChHHHHHHHHHHHHHHHHcCCceEEEecCCC
Confidence 7899999998653 34667789999999999999999999999975
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-39 Score=297.16 Aligned_cols=247 Identities=19% Similarity=0.305 Sum_probs=189.4
Q ss_pred HHHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 56 QDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 56 ~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
++||.++++++||+.||++|+|+|||||.|+.+.++.++..++++.++.++++|++|.++||+||||+|+.++.
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~------ 108 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEEL------ 108 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHH------
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCccc------
Confidence 37999999999999999999999999999987765554556778899999999999999999999999987421
Q ss_pred CCCCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 136 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 136 ~g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
|. +...+++.++|+.|++||+++|.+++|+|+|||.. ..+.+.+..++++++++||+++|+++|++++
T Consensus 109 ---------~~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~-~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~ 178 (320)
T 3nco_A 109 ---------YQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQ-NLTPTKWNELYPKVLGEIRKTNPSRIVIIDV 178 (320)
T ss_dssp ---------HHCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCT-TSCHHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred ---------ccCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCC-CCCHHHHHHHHHHHHHHHHhcCCCcEEEECC
Confidence 22 35788999999999999999999889999999996 3456899999999999999999999999986
Q ss_pred CCCCCChhhhhhcc-CCCCcEEEEeeecCCCCccccCc--------------cchhhhHHHHhhhhhhhhhhhccCCCce
Q 019395 214 RLGPADHKELLSFA-SGLSRVVIDVHYYNLFSNNFNGL--------------NVQQNIDYVNNQRASDLGAVTTSNGPLT 278 (341)
Q Consensus 214 ~~~~~~~~~~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~pv 278 (341)
...+. ...+..+. ..++++++++|.|.++....... ...+..+.+...+. .+..+.++.+.||
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~w~~~~~~~~~~w~g~~~~~~~~~~~~~-~~~~~~~~~g~Pv 256 (320)
T 3nco_A 179 PNWSN-YSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFK-YVSEWAKKNNVPI 256 (320)
T ss_dssp SGGGB-GGGGGGCCCCSCTTEEEEEEECCSHHHHTTTCTTSSSCCCSCCCCCCCHHHHHHHHHHHH-HHHHHHHHHTCCE
T ss_pred CCcCc-hhHHhcCCCCCCCCeEEEEEecCCeeeEeccccccCCCCCCCCCCCCchhhHHHHHHHHH-HHHHHHHHcCCCE
Confidence 43221 22232221 23789999999998753211000 00111223322222 2334445557789
Q ss_pred EEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 279 FVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 279 ~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
+|||||+... .+.+...+|++.+++.+++.++||++|+++..
T Consensus 257 ~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~~~ 298 (320)
T 3nco_A 257 FLGEFGAYSK---ADMESRVKWTKTVRRIAEEFGFSLAYWEFCAG 298 (320)
T ss_dssp EEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSGG
T ss_pred EEeeeeeecC---CCHHHHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 9999998653 34666778999999999999999999999743
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=283.49 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=176.3
Q ss_pred hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140 (341)
Q Consensus 61 ~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~ 140 (341)
++++++||+.||++|+|+|||||.|..+.++.+.+.++++.+++|+++|++|.++||+||||+|+.++. + |..
T Consensus 30 ~~~~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~-~-----g~~- 102 (305)
T 1h1n_A 30 IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRY-Y-----NSI- 102 (305)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEE-T-----TEE-
T ss_pred CCCCHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccc-c-----CCc-
Confidence 678999999999999999999999865443244467888899999999999999999999999998531 1 110
Q ss_pred CccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC-CceEEEeC-CCCCC
Q 019395 141 GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS-TAYVIMSN-RLGPA 218 (341)
Q Consensus 141 ~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p-~~~v~~~~-~~~~~ 218 (341)
....++++++|+.||+||+++|.| +|||+|||+. .+.+.|..++++++++||+++| +++|++++ .|.+.
T Consensus 103 ------~~~~~~~~~~~~~ia~~~~~~~~V-~~~l~NEP~~--~~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g~~~~~~ 173 (305)
T 1h1n_A 103 ------ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYHD--MDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGA 173 (305)
T ss_dssp ------CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCS--SCHHHHHHHHHHHHHHHHHTTCCSSCEEEECTGGGBS
T ss_pred ------CCcHHHHHHHHHHHHHHhCCCCeE-EEeccCCCCC--CCHHHHHHHHHHHHHHHHhcCCCccEEEEccccccCc
Confidence 023789999999999999999999 8999999995 3678999999999999999998 99999975 34321
Q ss_pred -Ch----hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCC
Q 019395 219 -DH----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS 293 (341)
Q Consensus 219 -~~----~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~ 293 (341)
.+ ..+..+.++.+|+|+++|.|.+++...++..+... ..+...+ ..+..+.+..+.||+|||||+.. .
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~g~Pv~igEfG~~~-----~ 246 (305)
T 1h1n_A 174 WTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGTSATCVSS-TIGQERI-TSATQWLRANGKKGIIGEFAGGA-----D 246 (305)
T ss_dssp TTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSCCSCCSCT-THHHHHH-HHHHHHHHHTTCCEEEEEEECCS-----S
T ss_pred ccccccCcccccCcCCCCCEEEEEEEcCCCCCcCCCCCccCc-chHHHHH-HHHHHHHHHcCCcEEEEeccCCC-----C
Confidence 11 11222323457999999999986532111111000 0001111 11222334557789999999864 1
Q ss_pred HHHHHHHHHHHHHHHccCC---CcEEEeccccC
Q 019395 294 KQDYQRFANAQLDVYGRAT---FGWAYWAHKCE 323 (341)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~---~Gw~~W~~k~~ 323 (341)
+...+|++.+++.+++++ +||++|+++.-
T Consensus 247 -~~~~~~~~~~~~~~~~~~~~~ig~~~W~~g~~ 278 (305)
T 1h1n_A 247 -NVCETAITGMLDYMAQNTDVWTGAIWWAAGPW 278 (305)
T ss_dssp -HHHHHHHHHHHHHHHTCTTTEEEEEEEEECTT
T ss_pred -hHHHHHHHHHHHHHHHcCCeeEEEEEECCCCC
Confidence 456788999999999999 99999997643
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=283.86 Aligned_cols=237 Identities=19% Similarity=0.269 Sum_probs=174.6
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
|++-++.|+++|||+|||||.|+.+.+...+++++++.+++|+++|++|.++||+||||+|+.++. ++... + .
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~-~g~~~-~----~- 117 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARW-NGGII-G----Q- 117 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEE-TTEET-T----T-
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCccc-CCccc-C----C-
Confidence 367778899999999999999986655334467888899999999999999999999999999752 11100 0 0
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-ceEEEeCC-CCCC-Ch
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSNR-LGPA-DH 220 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~v~~~~~-~~~~-~~ 220 (341)
.+...++++++|+.||+||++++.|+ |||+|||+. .+.+.|.+++++++++||+++|+ ++|++++. |.+. .+
T Consensus 118 --~~~~~~~~~~~w~~iA~ryk~~~~Vi-~el~NEP~~--~~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~w 192 (340)
T 3qr3_A 118 --GGPTNAQFTSLWSQLASKYASQSRVW-FGIMNEPHD--VNINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAF 192 (340)
T ss_dssp --TSSCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCS--SCHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTTT
T ss_pred --CHHHHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCC--CCHHHHHHHHHHHHHHHHhhCCCccEEEEeCCcccccccc
Confidence 02568899999999999999999997 999999995 35789999999999999999999 79999853 4321 11
Q ss_pred ------hhhhhccCC---CCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCC
Q 019395 221 ------KELLSFASG---LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 291 (341)
Q Consensus 221 ------~~~~~~~~~---~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~ 291 (341)
..+..+.++ ++|+||++|+|.+++.. .+..++....+. ...+.+..+.++++.|++|||||+..+
T Consensus 193 ~~~~~~~~l~~l~dP~~~~~nlvys~H~Y~~~~~s--gt~~~~~~~~i~-~~~~~~~~~~~~~g~pv~iGEfG~~~~--- 266 (340)
T 3qr3_A 193 ISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSDNS--GTHAECTTNNID-GAFSPLATWLRQNNRQAILTETGGGNV--- 266 (340)
T ss_dssp TTTSHHHHHTTCCCTTSCCTTEEEEEECCCSTTSS--SCSSSCCCCSTT-TTHHHHHHHHHHTTCCEEEEEECCCSS---
T ss_pred cccccchhhcccCCCCCCCCCEEEEEEeCCCCCCC--CCCcccchhhHH-HHHHHHHHHHHHcCCcEEEeCccCCCC---
Confidence 112222223 38999999999987643 222222111221 122233344556788899999998531
Q ss_pred CCHHHHHHHHHHHHHHHccCC---CcEEEeccc
Q 019395 292 ASKQDYQRFANAQLDVYGRAT---FGWAYWAHK 321 (341)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~---~Gw~~W~~k 321 (341)
+...++++.+++.++++. +||++|+..
T Consensus 267 ---~~~~~~~~~~l~~~~~~~~~~~gw~~W~~G 296 (340)
T 3qr3_A 267 ---QSCIQDMCQQIQYLNQNSDVYLGYVGWGAG 296 (340)
T ss_dssp ---HHHHHHHHHHHHHHHTTTTTEEEEEEEEEE
T ss_pred ---hHHHHHHHHHHHHHHHcCCcceEEEEecCC
Confidence 456788999999998888 777777655
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-36 Score=281.51 Aligned_cols=242 Identities=19% Similarity=0.269 Sum_probs=172.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCccc----------chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVG----------GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~----------~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
++||+.||++|||+||||+.|+.+.+...++.++. ..+++|+++|++|.++||+||||+|+ |++++.
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~-~~~~~~-- 123 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR-PDCSGQ-- 123 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE-SBTTBC--
T ss_pred HHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC-CCCCCC--
Confidence 89999999999999999999876543222223332 38999999999999999999999998 655432
Q ss_pred CCCCCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChHHHHHHHHHHHHHHHhcCCCc
Q 019395 135 HSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 135 ~~g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
...|. +..+++++++|+.|++||+++|.|++|||+|||.... .....|..++++++++||+++|++
T Consensus 124 -------~~~w~~~~~~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~ 196 (358)
T 1ece_A 124 -------SALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196 (358)
T ss_dssp -------CSSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTS
T ss_pred -------CCCCcCCCccHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCe
Confidence 12353 4678999999999999999999999999999998631 235689999999999999999999
Q ss_pred eEEEeCCC--------CCCChhhhhhcc---CCCCcEEEEeeecCCCCcccc---CccchhhhHHHHhhhhhhhhhhhcc
Q 019395 208 YVIMSNRL--------GPADHKELLSFA---SGLSRVVIDVHYYNLFSNNFN---GLNVQQNIDYVNNQRASDLGAVTTS 273 (341)
Q Consensus 208 ~v~~~~~~--------~~~~~~~~~~~~---~~~~~~v~~~H~Y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (341)
+|++++.. ++.+.......+ ...+|+|+++|.|.++..... .......+.. .+...+..+.++
T Consensus 197 ~v~v~g~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~~---~~~~~~~~~~~~ 273 (358)
T 1ece_A 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPG---IWNKNWGYLFNQ 273 (358)
T ss_dssp EEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHH---HHHHHTHHHHHT
T ss_pred EEEECCCccCCCCCCccCCcCCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHHH---HHHHHHHHHHhc
Confidence 99997432 112222221111 125789999999998652111 1111122221 111222333455
Q ss_pred CCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHcc------CCCcEEEeccccCC
Q 019395 274 NGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR------ATFGWAYWAHKCEA 324 (341)
Q Consensus 274 ~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~Gw~~W~~k~~~ 324 (341)
.+.||+|||||+... . ....+|++..++.+++ .++||++|+++.++
T Consensus 274 ~g~Pv~igEfG~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~~ 325 (358)
T 1ece_A 274 NIAPVWLGEFGTTLQ----S-TTDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDS 325 (358)
T ss_dssp TSSCEEEEECCCCCC----S-HHHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSCC
T ss_pred CCCCEEEeccCCCCC----C-CccHHHHHHHHHHHHHhhhcccCCceeeEEcccCCC
Confidence 677899999998653 1 1224566666666666 89999999999764
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-37 Score=281.60 Aligned_cols=245 Identities=18% Similarity=0.324 Sum_probs=184.1
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
++|.++++++||+.||++|||+||||+.|+.+.++..+..++++.++++|++|++|.++||+||||+|+.++.++
T Consensus 28 ~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~----- 102 (317)
T 3aof_A 28 GDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN----- 102 (317)
T ss_dssp TTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHH-----
T ss_pred CcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccC-----
Confidence 678888999999999999999999999987665433333456778999999999999999999999998754211
Q ss_pred CCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-C
Q 019395 137 ATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-L 215 (341)
Q Consensus 137 g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~ 215 (341)
. .+..++++.++|+.|++||+++|.+++|||+|||.. ..+.+.|.+++++++++||+++|+++|++++. |
T Consensus 103 -----~---~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~-~~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~~ 173 (317)
T 3aof_A 103 -----D---PEEHKERFLALWKQIADRYKDYPETLFFEILNAPHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEW 173 (317)
T ss_dssp -----C---HHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCT-TSCHHHHHHHHHHHHHHHHHHCSSSCEEECCSGG
T ss_pred -----C---cHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEECCCCc
Confidence 0 146789999999999999999999889999999996 35678999999999999999999999999853 3
Q ss_pred CCCChhhhhhc--cCCCCcEEEEeeecCCCCccccCcc----------------chhhhHHHHhhhhhhhhhhhccCCCc
Q 019395 216 GPADHKELLSF--ASGLSRVVIDVHYYNLFSNNFNGLN----------------VQQNIDYVNNQRASDLGAVTTSNGPL 277 (341)
Q Consensus 216 ~~~~~~~~~~~--~~~~~~~v~~~H~Y~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~p 277 (341)
.. ...+..+ +....++++++|.|.++.. ++.. .....+.+...+ ..+..+.++.+.|
T Consensus 174 ~~--~~~~~~~~~p~~~~~~v~~~H~Y~~~~~--~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~g~P 248 (317)
T 3aof_A 174 GG--ISALEKLSVPKWEKNSIVTIHYYNPFEF--THQGAEWVEGSEKWLGRKWGSPDDQKHLIEEF-NFIEEWSKKNKRP 248 (317)
T ss_dssp GS--STTGGGCCCCTTCCSEEEEEECCCSHHH--HTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHH-HHHHHHHHHHTCC
T ss_pred Cc--HhHHhhCcCCCCCCCEEEEEeccCCccc--ccCCCCCcCcccccCCcCcCcHHHHHHHHHHH-HHHHHHHHHcCCC
Confidence 32 1222222 2234799999999987531 1110 011112222222 2222333445778
Q ss_pred eEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 278 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 278 v~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
|+|||||+... .+.+...+|++.+++.+++.++||++|+++..
T Consensus 249 v~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 291 (317)
T 3aof_A 249 IYIGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSG 291 (317)
T ss_dssp EEEEECCCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSST
T ss_pred EEEeeccccCC---CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 99999998653 34566778899999999889999999999854
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=285.25 Aligned_cols=256 Identities=16% Similarity=0.201 Sum_probs=180.8
Q ss_pred HHHHHHHHh-hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCC
Q 019395 52 PQVLQDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ 130 (341)
Q Consensus 52 ~~~~~~~~~-~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~ 130 (341)
....+.||. ++++++||+.||++|||+|||||.|..+..+.++..++++.+++|+++|++|.++||+||||+|+.+...
T Consensus 51 ~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~~~~~~ 130 (376)
T 3ayr_A 51 QTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHHETWNH 130 (376)
T ss_dssp TTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSCSSCC
T ss_pred CCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCccccc
Confidence 344568996 5889999999999999999999999766544444567788999999999999999999999999975211
Q ss_pred CCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----------ChHHHHHHHHHHHHHH
Q 019395 131 NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLKSYYKAGYDAV 200 (341)
Q Consensus 131 ~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----------~~~~~~~~~~~~~~aI 200 (341)
. . +. -.+..++.+.++|+.||+||++++.+++|||+|||..... ..+.+.+++++++++|
T Consensus 131 ~---~-~~------~~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~~~aI 200 (376)
T 3ayr_A 131 A---F-SE------TLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAMNAVFLKTV 200 (376)
T ss_dssp S---C-TT------THHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred c---c-cc------chHHHHHHHHHHHHHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHHHHHHHHHH
Confidence 0 0 10 0146788999999999999999998889999999996321 1235778999999999
Q ss_pred HhcC---CCceEEEeCCCCCCChhhhhhc--cCCCCcEEEEeeecCCCCccccC------ccchhhhHHHHhhhhhhhhh
Q 019395 201 RKYT---STAYVIMSNRLGPADHKELLSF--ASGLSRVVIDVHYYNLFSNNFNG------LNVQQNIDYVNNQRASDLGA 269 (341)
Q Consensus 201 R~~~---p~~~v~~~~~~~~~~~~~~~~~--~~~~~~~v~~~H~Y~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 269 (341)
|+++ |+++|++++...+.+...+..+ +..++|+|+++|.|.++...... .........+...+. .+..
T Consensus 201 R~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 279 (376)
T 3ayr_A 201 RSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPYNFALNNGEGAVDKFDAAGKRDLEWNIN-LMKK 279 (376)
T ss_dssp HTSSTTGGGCCEEECCGGGBCSHHHHHTCCCCTTCTTEEEEEECCCSHHHHTCCSTTCCSSCCHHHHHHHHHHHH-HHHH
T ss_pred HHcCCCCCCcEEEECCCccCccccccccccCCCCCCCEEEEEeecCchhccccCCCCcccccChhhhhHHHHHHH-HHHH
Confidence 9995 4578888853222222233322 23358999999999985321110 000111111211111 1222
Q ss_pred hhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 270 VTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 270 ~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
..+..+.||+|||||+... .+.+...+|++..++.+++.++||++|+++
T Consensus 280 ~~~~~g~Pv~igEfG~~~~---~~~~~~~~w~~~~~~~~~~~~ig~~~W~~g 328 (376)
T 3ayr_A 280 RFVDQGIPMILGEYGAMNR---DNEEDRATWAEFYMEKVTAMGVPQIWWDNG 328 (376)
T ss_dssp HTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCCEEEEECS
T ss_pred HHHHcCCcEEEEccccCCC---CCcHHHHHHHHHHHHHHHHCCCcEEEECCC
Confidence 2234467899999998763 245566788888888888899999999975
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-36 Score=287.70 Aligned_cols=248 Identities=16% Similarity=0.182 Sum_probs=178.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCC-------CC--cccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPP-------KP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~-------~~--~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
+++++.|+++|||+||||++|+.+.+...+ .| ++...++.||++|++|.++||+||||+|+.++.++
T Consensus 87 ~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~---- 162 (458)
T 3qho_A 87 EDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI---- 162 (458)
T ss_dssp HHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSC----
T ss_pred HHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccC----
Confidence 789999999999999999999865432111 11 13468999999999999999999999999876421
Q ss_pred CCCCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----------------CChHHHHHHHHHH
Q 019395 136 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----------------VALDTLKSYYKAG 196 (341)
Q Consensus 136 ~g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-----------------~~~~~~~~~~~~~ 196 (341)
.+.|. ...+++++++|+.||+||+++|.|++|||+|||+... .+...|+.+++++
T Consensus 163 ------~~~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~a 236 (458)
T 3qho_A 163 ------EPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERI 236 (458)
T ss_dssp ------CSSSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHH
T ss_pred ------CCccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHH
Confidence 23465 3468999999999999999999999999999999521 2346899999999
Q ss_pred HHHHHhcCCCceEEEeCC-CCC----------------CChhhhhhccC--CCCcEEEEeeecCCCCccccCc-cchhhh
Q 019395 197 YDAVRKYTSTAYVIMSNR-LGP----------------ADHKELLSFAS--GLSRVVIDVHYYNLFSNNFNGL-NVQQNI 256 (341)
Q Consensus 197 ~~aIR~~~p~~~v~~~~~-~~~----------------~~~~~~~~~~~--~~~~~v~~~H~Y~~~~~~~~~~-~~~~~~ 256 (341)
+++||+++|+++|++++. |.+ .++....+.+. +.+|+||++|.|.+.....+.. ......
T Consensus 237 i~aIRa~dp~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~ 316 (458)
T 3qho_A 237 GKAILKVAPHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFP 316 (458)
T ss_dssp HHHHHHHCTTCEEEECCBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTT
T ss_pred HHHHHHhCCCCEEEEcCCcccCccccccccccccCcCCCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchH
Confidence 999999999999999853 322 13344444332 3589999999998743211111 010111
Q ss_pred HHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCC-cEEEeccccCC
Q 019395 257 DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATF-GWAYWAHKCEA 324 (341)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gw~~W~~k~~~ 324 (341)
..+...+...+..+.++++.||+|||||......+.+. ..+|++..++.++++++ +|++|||++++
T Consensus 317 ~~~~~~w~~~~g~l~~~~~~Pl~igEfG~~~~~g~~~~--~~~w~~~~~~yl~~~~i~~w~~W~~np~s 383 (458)
T 3qho_A 317 DNLPDIWYHHFGYVKLELGYSVVIGEFGGKYGHGGDPR--DVIWQNKLVDWMIENKFCDFFYWSWNPDS 383 (458)
T ss_dssp TTHHHHHHHHTTHHHHTTCCCBCBCBCCCCTTSSSCTH--HHHHHHHHHHHHHHTTCCCEEESCSSSCC
T ss_pred HHHHHHHHhhhhhHhhcCCCcEEEEecCCCcCCCCCcc--hHHHHHHHHHHHHhcCCCCEEEEecCCCC
Confidence 12222333344455556677899999998763211222 24688888888888886 89999999774
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-36 Score=282.09 Aligned_cols=252 Identities=17% Similarity=0.228 Sum_probs=179.5
Q ss_pred HHHHHh-hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCC
Q 019395 55 LQDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 133 (341)
Q Consensus 55 ~~~~~~-~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~ 133 (341)
++.+|. .+++++||+.||++|||+|||||.|+.+.. .+...++++.+++|+++|++|.++||+||||+|+.++.....
T Consensus 53 ~e~~W~~~~~~~~di~~i~~~G~n~vRipv~w~~~~~-~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~ 131 (380)
T 1edg_A 53 YETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVS-GSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGY 131 (380)
T ss_dssp HHHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEE-TTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSB
T ss_pred ccCcCCCCcccHHHHHHHHHcCCCEEEecccHHhhcC-CCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCC
Confidence 346674 457899999999999999999999876653 333467778899999999999999999999999987643211
Q ss_pred CCCCCCCCccCCc-hhHHHHH-HHHHHHHHHHhCCCCceeEEEeecCCCCCC--CCh-------------HHHHHHHHHH
Q 019395 134 EHSATRDGFQEWG-DSNVADT-VAVIDFLAARYANRPSLAAIELINEPLAPG--VAL-------------DTLKSYYKAG 196 (341)
Q Consensus 134 ~~~g~~~~~~~w~-~~~~~~~-~~~~~~la~~y~~~~~v~~~el~NEP~~~~--~~~-------------~~~~~~~~~~ 196 (341)
.+.+. +..++++ .++|+.|++||+++|.+++|||+|||+... ... +.+.++++++
T Consensus 132 --------~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~ 203 (380)
T 1edg_A 132 --------FPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDF 203 (380)
T ss_dssp --------CSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHH
Confidence 11222 5678899 999999999999999999999999998632 111 5568999999
Q ss_pred HHHHHhcC---CCceEEEeCCCCCCChhhhhhc--cCC----CCcEEEEeeecCCCCccccCccc------------hhh
Q 019395 197 YDAVRKYT---STAYVIMSNRLGPADHKELLSF--ASG----LSRVVIDVHYYNLFSNNFNGLNV------------QQN 255 (341)
Q Consensus 197 ~~aIR~~~---p~~~v~~~~~~~~~~~~~~~~~--~~~----~~~~v~~~H~Y~~~~~~~~~~~~------------~~~ 255 (341)
+++||+++ |+++|++++...+.+...+..+ +.. .+|+|+++|.|.++.. ++... ...
T Consensus 204 ~~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~d~~~~~~n~v~s~H~Y~~~~f--~~~~~~~~g~~~w~~~~~~~ 281 (380)
T 1edg_A 204 VNTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNF--AGLAMADGGTNAWNINDSKD 281 (380)
T ss_dssp HHHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHH--HTSCGGGTCCCCCCTTCHHH
T ss_pred HHHHHhcCCCCCCceEEECCCcCCccccccccccCCCCCccccCcEEEEEeecCCccc--ccccccCCCCCccCCCchhh
Confidence 99999994 8899999753221111222222 222 2399999999988532 11100 111
Q ss_pred hHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 256 IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
.+.+...+ ..+..+.++.+.||+|||||+... .+.+...+|++..++.+++.++||++|++.
T Consensus 282 ~~~i~~~~-~~~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gig~~~W~~g 343 (380)
T 1edg_A 282 QSEVTWFM-DNIYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNN 343 (380)
T ss_dssp HHHHHHHH-HHHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHHHHHH-HHHHHHHHHcCCCEEEEeccCCCC---CChHHHHHHHHHHHHHHHHCCCceEEECCC
Confidence 12222222 122223334577899999998763 234566788999999988899999999964
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=274.49 Aligned_cols=229 Identities=18% Similarity=0.286 Sum_probs=168.8
Q ss_pred HHHhhccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
.++.++++++||+.|+ ++|+|+||||+.|. .++...+++.+++||++|++|.++||+||||+|..++++.
T Consensus 38 ~~~~~~~~~~~~~~l~~~~G~N~VRip~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---- 108 (303)
T 7a3h_A 38 QWYGQFVNYESMKWLRDDWGINVFRAAMYTS-----SGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---- 108 (303)
T ss_dssp HHHGGGCSHHHHHHHHHHTCCCEEEEEEESS-----TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST----
T ss_pred ccccccCCHHHHHHHHHhcCCCEEEEEEEeC-----CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCCc----
Confidence 3566789999999998 79999999999762 1112235668999999999999999999999999876421
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCCh-HHHHHHHHHHHHHHHhcCCCceEEEeCC
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNR 214 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~-~~~~~~~~~~~~aIR~~~p~~~v~~~~~ 214 (341)
....+++.++|+.|++||+++|.|+ |||+|||....... +.++.++++++++||+++|+++|++++.
T Consensus 109 -----------~~~~~~~~~~w~~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~ 176 (303)
T 7a3h_A 109 -----------NIYKEEAKDFFDEMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTG 176 (303)
T ss_dssp -----------TTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCH
T ss_pred -----------hHHHHHHHHHHHHHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCC
Confidence 1346788999999999999999998 99999999633333 3788999999999999999999999864
Q ss_pred CCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH
Q 019395 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK 294 (341)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~ 294 (341)
..+.++..+...+..++|++|++|.|.... .+. +.. .+ .+.+..+.|++|||||..........
T Consensus 177 ~w~~~~~~~~~~p~~~~n~v~s~H~Y~~~~--------~~~---~~~----~~-~~~~~~g~P~~igEfG~~~~~~~g~~ 240 (303)
T 7a3h_A 177 TWSQDVHHAADNQLADPNVMYAFHFYAGTH--------GQN---LRD----QV-DYALDQGAAIFVSEWGTSAATGDGGV 240 (303)
T ss_dssp HHHTBHHHHHTSCCSCTTEEEEEEEETTSC--------CHH---HHH----HH-HHHHHTTCCEEEEEEESSCTTSCSCC
T ss_pred CcccchhhHhhCCCCCCCEEEEEEecCCCc--------hHH---HHH----HH-HHHHHcCCCEEEECCCCCCCCCCCcc
Confidence 333344444444445689999999996421 111 111 11 12233466899999998754211111
Q ss_pred HHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 295 QDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
..++++..++.++++++||++|+|+...
T Consensus 241 --~~~~~~~~l~~~~~~~i~w~~W~~~~~~ 268 (303)
T 7a3h_A 241 --FLDEAQVWIDFMDERNLSWANWSLTHKD 268 (303)
T ss_dssp --CHHHHHHHHHHHHHTTCCEEEEEESCCS
T ss_pred --cHHHHHHHHHHHHhcCCceEEEEecCCC
Confidence 2345556677777899999999998653
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=275.48 Aligned_cols=256 Identities=19% Similarity=0.270 Sum_probs=179.0
Q ss_pred HHHh-hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 57 DHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 57 ~~~~-~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
.||. ++++++||+.||++|||+|||||.|+.++.+.++..++++.+++|+++|++|.++||+||||+|+.. .++.
T Consensus 63 ~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~-~~~~--- 138 (395)
T 2jep_A 63 TAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDG-YNSV--- 138 (395)
T ss_dssp TTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGG-CTTS---
T ss_pred cccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcc-ccCC---
Confidence 6775 5789999999999999999999999866666544567778999999999999999999999999972 2110
Q ss_pred CCCCCCccCCc-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CC---hHHHHHHHHHHHHHHHh
Q 019395 136 SATRDGFQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VA---LDTLKSYYKAGYDAVRK 202 (341)
Q Consensus 136 ~g~~~~~~~w~-------~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~---~~~~~~~~~~~~~aIR~ 202 (341)
.| .|. +..++++.++|+.|++||+++|.|++|||+|||+... .. .+.+..++++++++||+
T Consensus 139 ~g------~w~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR~ 212 (395)
T 2jep_A 139 QG------GWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVRQ 212 (395)
T ss_dssp TT------CCCCTTCSCHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CC------ccccCCcccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 01 132 2467899999999999999999999999999998631 11 25789999999999999
Q ss_pred cC---CCceEEEeCCCCCCCh--hh-hhhcc----------CCCCcEEEEeeecCCCCcccc-----------Cccch--
Q 019395 203 YT---STAYVIMSNRLGPADH--KE-LLSFA----------SGLSRVVIDVHYYNLFSNNFN-----------GLNVQ-- 253 (341)
Q Consensus 203 ~~---p~~~v~~~~~~~~~~~--~~-~~~~~----------~~~~~~v~~~H~Y~~~~~~~~-----------~~~~~-- 253 (341)
++ |+++|++++...+.++ .. -+..+ ...+++|+++|.|.++..... ...+.
T Consensus 213 ~~~~np~~~I~v~g~~~~~~~~~~~~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~~~ 292 (395)
T 2jep_A 213 TGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKK 292 (395)
T ss_dssp SSGGGGTSCEEEECGGGCHHHHHSSSSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGGGB
T ss_pred hCCCCCCcEEEECCCccCcccccccccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCcccc
Confidence 94 6789999752111111 00 01111 124799999999987531110 00000
Q ss_pred --hhh-HHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-CC-CHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 254 --QNI-DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-DA-SKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 254 --~~~-~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
... +.+...+.. +..+.+..+.||+|||||+..... +. +.+...+|++.+++.+++.++||++|+++..
T Consensus 293 ~~~~~~~~i~~~~~~-~~~~~~~~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~W~~~~~ 366 (395)
T 2jep_A 293 STWGQEDYLESQFKS-MYDKFVTQGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGHN 366 (395)
T ss_dssp CSSCSHHHHHHHHHH-HHHHTGGGTCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cccCcHHHHHHHHHH-HHHHHHHcCCCEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 000 122222221 122233446789999999876421 11 2345668999999999999999999999853
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-35 Score=269.54 Aligned_cols=241 Identities=18% Similarity=0.260 Sum_probs=175.5
Q ss_pred HHHhhccCHHHHHHH-HHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFL-SSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i-~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
.++..+++++|++.| +++|+|+||+|+.+. .++...+++.++.|+++|++|.++||+||||+|..++++.
T Consensus 63 ~~~~~~~~~~~~~~l~~~~G~N~VRi~~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~---- 133 (327)
T 3pzt_A 63 QWYGEYVNKDSLKWLRDDWGITVFRAAMYTA-----DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP---- 133 (327)
T ss_dssp HHHGGGCSHHHHHHHHHHTCCSEEEEEEESS-----TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST----
T ss_pred hhcCCCCCHHHHHHHHHhcCCCEEEEEeEEC-----CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc----
Confidence 345678899999999 689999999999541 1222335678999999999999999999999999875321
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
....+.+.++|+.|++|||++|.|+ |||+|||.....-...+..++++++++||+++|+++|++++..
T Consensus 134 -----------~~~~~~~~~~w~~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~ 201 (327)
T 3pzt_A 134 -----------NQNKEKAKEFFKEMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGT 201 (327)
T ss_dssp -----------TTTHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHH
T ss_pred -----------hHHHHHHHHHHHHHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCc
Confidence 1346788999999999999999999 9999999863222358999999999999999999999998643
Q ss_pred CCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHH
Q 019395 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQ 295 (341)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~ 295 (341)
++.++..+...+..++|+||++|.|.+.. .+.+.. .+ .+.+..+.|++|||||........ .
T Consensus 202 w~~~~~~~~~~~~~~~n~v~s~H~Y~~~~--------~~~~~~-------~~-~~~~~~g~Pv~igEfG~~~~~g~g--~ 263 (327)
T 3pzt_A 202 WSQDVNDAADDQLKDANVMYALHFYAGTH--------GQFLRD-------KA-NYALSKGAPIFVTEWGTSDASGNG--G 263 (327)
T ss_dssp HHTCHHHHHTSCCCCTTEEEEEEEETTTC--------CHHHHH-------HH-HHHHHTTCCEEEEEEESSCTTSCS--C
T ss_pred ccccchhhhhCCCCCCCeEEEEEecCCCc--------hHHHHH-------HH-HHHHHcCCcEEEEccCCCCCCCCC--c
Confidence 33444444444445689999999996521 111111 11 123345678999999986532111 1
Q ss_pred HHHHHHHHHHHHHccCCCcEEEeccccCC-------------CCCChHHHHHCC
Q 019395 296 DYQRFANAQLDVYGRATFGWAYWAHKCEA-------------NHWSLKWMIENG 336 (341)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-------------~~W~~~~~~~~g 336 (341)
....+++..++.++++++||++|+|+... ..|+-..+.+.|
T Consensus 264 ~~~~~~~~~l~~~~~~~i~w~~W~~~d~~e~~~~l~~~~~~~~~~~~~~l~~~g 317 (327)
T 3pzt_A 264 VFLDQSREWLKYLDSKTISWVNWNLSDKQESSSALKPGASKTGGWRLSDLSASG 317 (327)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESCCSSTTCSBCTTCCTTCCCCGGGBCHHH
T ss_pred ccHHHHHHHHHHHHHcCCeeEEEEecCCCCcceeecCCCCCCCCCChHhcCHHH
Confidence 12345666777778889999999999653 267765555444
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=282.02 Aligned_cols=252 Identities=18% Similarity=0.340 Sum_probs=178.7
Q ss_pred hccCHHHH-HHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC-------CCCCCC-
Q 019395 61 SYITDEDF-KFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA-------APGSQN- 131 (341)
Q Consensus 61 ~~~~e~d~-~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~-------~~g~~~- 131 (341)
.+++++|| +.||++|||+||||+.|+.+ +|.+ +.|+.+.+++|+++|++|+++||+||||+|+ .|++++
T Consensus 64 ~~~~~~di~~~l~~~G~N~VRl~v~w~~~-~p~~-g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ 141 (481)
T 2osx_A 64 PQFTEADLAREYADMGTNFVRFLISWRSV-EPAP-GVYDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSG 141 (481)
T ss_dssp CSCCHHHHHHHHHHHCCCEEEEEECHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSB
T ss_pred ccccHHHHHHHHHHCCCCEEEEeCcHHHc-CCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccc
Confidence 46789999 99999999999999998644 5554 4788889999999999999999999999998 677663
Q ss_pred -CCCCCCCCCCccCC------------------------------------c-hhHHHHHHHHHHHHHHHhCCCCceeEE
Q 019395 132 -GNEHSATRDGFQEW------------------------------------G-DSNVADTVAVIDFLAARYANRPSLAAI 173 (341)
Q Consensus 132 -~~~~~g~~~~~~~w------------------------------------~-~~~~~~~~~~~~~la~~y~~~~~v~~~ 173 (341)
+++.+| .+.+.| . +..++++.++|+.|++||+++|.|++|
T Consensus 142 ng~~~gg--~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~ 219 (481)
T 2osx_A 142 NGAGAIG--NGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAY 219 (481)
T ss_dssp TTBCSSS--BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cccccCC--CCCccceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 333222 122222 1 356789999999999999999999999
Q ss_pred EeecCCCCCCC-----ChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCCh---hhhhhccC---CCCcEEEEeeecCC
Q 019395 174 ELINEPLAPGV-----ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADH---KELLSFAS---GLSRVVIDVHYYNL 242 (341)
Q Consensus 174 el~NEP~~~~~-----~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~---~~~~~~~~---~~~~~v~~~H~Y~~ 242 (341)
||+|||..... +.+.+..++++++++||+++|+++|++++...+.++ ..+..+.+ ..+++|+++|.|.+
T Consensus 220 el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~dp~~~I~v~~~~~~~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~~ 299 (481)
T 2osx_A 220 DLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPL 299 (481)
T ss_dssp ECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTTCSSSEEEECCCSTTGGGTCCCCCCCCCCCSSSSCCEEECCBCCCH
T ss_pred EeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCcccccccCCCCCCcccCCCcccCCCEEEEEEecCc
Confidence 99999996321 246789999999999999999999999853221111 11212111 23689999999975
Q ss_pred CC---ccccCccchhhhHHHHhhhhhhhhhhhccC-CCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEe
Q 019395 243 FS---NNFNGLNVQQNIDYVNNQRASDLGAVTTSN-GPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 318 (341)
Q Consensus 243 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W 318 (341)
+. ..+...........+.. ....+..+.++. +.||+|||||...+. +...+|++.+++.+++.++||++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~Pv~igEfG~~~~~-----~~~~~~~~~~~~~~~~~~ig~~~W 373 (481)
T 2osx_A 300 PLDIGDGHEGLARTLTDVTIDA-WRANTAHTARVLGDVPIILGSFGLDTTL-----PGARDYIERVYGTAREMGAGVSYW 373 (481)
T ss_dssp HHHHTTSSSHHHHHHHHHHHHH-HHHHHHHHHHHTTSCCBEECBCCCCTTS-----TTHHHHHHHHHHHHHHHTCEEEES
T ss_pred ccccCCccCccchhhHHHHHHH-HHHHHHHHHHHhcCCCEEEeccCCCCCc-----hHHHHHHHHHHHHHHHcCCCeEEE
Confidence 31 11111111111111221 122334445555 788999999964321 234678888888888888999999
Q ss_pred cccc
Q 019395 319 AHKC 322 (341)
Q Consensus 319 ~~k~ 322 (341)
+++.
T Consensus 374 ~~~~ 377 (481)
T 2osx_A 374 SSDP 377 (481)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9985
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=261.72 Aligned_cols=218 Identities=17% Similarity=0.250 Sum_probs=158.4
Q ss_pred hccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCc---c-cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPF---V-GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 61 ~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~---~-~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
.+++++||+.|| ++|||+||+|+.|. +..+ .| + ++.+++||++|++|.++||+||||+|+.++.
T Consensus 37 ~~~~~~di~~~~~~~G~N~vRi~~~~~----~~~~-~~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~------ 105 (293)
T 1tvn_A 37 KFYTAETVAKAKTEFNATLIRAAIGHG----TSTG-GSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH------ 105 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECC----TTST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG------
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecccc----CCCC-CccccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc------
Confidence 467899999999 59999999999873 2222 23 2 4689999999999999999999999997531
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR- 214 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~- 214 (341)
...+++.++|+.|++||+++|+|+ |||+|||.... ..+.+.+++++++++||+++|+++|++++.
T Consensus 106 ------------~~~~~~~~~~~~~a~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~ 171 (293)
T 1tvn_A 106 ------------TDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPT 171 (293)
T ss_dssp ------------GCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHTTCCSCEEEECCHH
T ss_pred ------------ccHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCCCc-hHHHHHHHHHHHHHHHHhhCCCCEEEECCCC
Confidence 346889999999999999999998 99999998632 125799999999999999999999999753
Q ss_pred CCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-C-C
Q 019395 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-D-A 292 (341)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-~-~ 292 (341)
|. .+.......+..++|+||++|.|.+.. .+.+.. .+ ...+..+.||+|||||+..... + .
T Consensus 172 ~~-~~~~~~~~~p~~~~n~v~s~H~Y~~~~--------~~~~~~-------~~-~~~~~~~~Pv~igEfG~~~~~~~g~~ 234 (293)
T 1tvn_A 172 WS-QDVDVASQNPIDRANIAYTLHFYAGTH--------GQSYRN-------KA-QTALDNGIALFATEWGTVNADGNGGV 234 (293)
T ss_dssp HH-TCHHHHHHSCCCSSSEEEEEEEETTTC--------CHHHHH-------HH-HHHHHTTCCEEEEEEESSCTTSCSCC
T ss_pred cc-cccchhccCCCCCCCEEEEEEeCCCCc--------hHHHHH-------HH-HHHHHCCCcEEEEcccCcCCCCCCCC
Confidence 32 222222222234578999999997631 111111 11 1223446789999999865321 1 2
Q ss_pred CHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 293 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
+.+...+| ++.+++.++||++|+|+..+
T Consensus 235 ~~~~~~~~----~~~~~~~~~g~~~W~~~~~~ 262 (293)
T 1tvn_A 235 NINETDAW----MAFFKTNNISHANWALNDKN 262 (293)
T ss_dssp CHHHHHHH----HHHHHHHTCCEEEEEESCSS
T ss_pred CHHHHHHH----HHHHHHCCCeeEEEecCCCC
Confidence 33334444 44556677999999999753
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=270.15 Aligned_cols=239 Identities=17% Similarity=0.233 Sum_probs=163.6
Q ss_pred hhccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCC
Q 019395 60 DSYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSA 137 (341)
Q Consensus 60 ~~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g 137 (341)
..+++++||+.|+ ++|||+||||+.|. .++..++++.+++|+++|++|.++||+||||+|+. +|.++.
T Consensus 51 ~~~~~~~d~~~l~~~~G~N~VRip~~~~-----~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~~~----- 120 (364)
T 1g01_A 51 GEIVNENAFVALSNDWGSNMIRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA----- 120 (364)
T ss_dssp GGGCSHHHHHHHHTTSCCSEEEEEEESS-----SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS-----
T ss_pred CCccCHHHHHHHHHHCCCCEEEEEeeeC-----CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCh-----
Confidence 3567899999996 99999999999862 22235677889999999999999999999999985 443321
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhC---CCCceeEEEeecCCCCCC-----C-----ChHHHHHHHHHHHHHHHhcC
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYA---NRPSLAAIELINEPLAPG-----V-----ALDTLKSYYKAGYDAVRKYT 204 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~---~~~~v~~~el~NEP~~~~-----~-----~~~~~~~~~~~~~~aIR~~~ 204 (341)
...+.+.++|+.|++||+ ++|.|+ |||+|||.... . ....++.++++++++||+++
T Consensus 121 ----------~~~~~~~~~w~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~ 189 (364)
T 1g01_A 121 ----------DVYSGAYDFFEEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG 189 (364)
T ss_dssp ----------GGGTTHHHHHHHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ----------HHHHHHHHHHHHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 112457899999999999 678997 99999998521 1 12357889999999999999
Q ss_pred CCceEEEeCCCCCCChhhhhhccCCCCcEEEEeeecCCCCccc----cCccchhhhHHHHhhhhhhhhhhhccCCCceEE
Q 019395 205 STAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNF----NGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 280 (341)
Q Consensus 205 p~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~v 280 (341)
+++|++++..++.........+..++|+||++|.|.++.... .....++..+.+ ...+. +.+..+.||+|
T Consensus 190 -~~~I~v~~~~w~~~~~~~~~~p~~~~niv~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~g~Pv~i 263 (364)
T 1g01_A 190 -DNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNV----MANVR-YALDNGVAVFA 263 (364)
T ss_dssp -CCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCH----HHHHH-HHHHTTCCEEE
T ss_pred -CcEEEECCCCcccccchhhcCCCCCCCEEEEEEecCCccCCCCCCCCCCchHHHHHHH----HHHHH-HHHHCCCeEEE
Confidence 999999753222232222222334689999999998864211 000111111111 11122 22345778999
Q ss_pred EeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCCCCC
Q 019395 281 GEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 327 (341)
Q Consensus 281 GE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W 327 (341)
||||+........ ....+++++++.+++.++||++|+|+.....+
T Consensus 264 gEfG~~~~~~~~~--~~~~~~~~~~~~~~~~~ig~~~W~~~~~~~~~ 308 (364)
T 1g01_A 264 TEWGTSQANGDGG--PYFDEADVWLNFLNKHNISWANWSLTNKNEIS 308 (364)
T ss_dssp EEEESSBTTTBSC--CCHHHHHHHHHHHHHTTCCEEEEEECCSSSTT
T ss_pred EccccccCCCCCC--cCHHHHHHHHHHHHHCCCceEEEeCCCCCCce
Confidence 9999865311111 11244556667788889999999999764333
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=256.99 Aligned_cols=219 Identities=18% Similarity=0.258 Sum_probs=158.5
Q ss_pred hccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCccc-chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 61 ~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~-~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
.+++++||+.|+ ++|+|+||+|+.|. .. .+...++ ..++.||++|++|.++||+||||+|+.++
T Consensus 37 ~~~~~~d~~~l~~~~G~N~vR~~~~~~---~~-~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~---------- 102 (291)
T 1egz_A 37 KFYTADTVASLKKDWKSSIVRAAMGVQ---ES-GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA---------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECS---ST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG----------
T ss_pred ccCCHHHHHHHHHHcCCCEEEEecccc---cc-CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc----------
Confidence 467899999999 89999999999873 11 1111222 47999999999999999999999998742
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGP 217 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~~ 217 (341)
+...+.+.++|+.|++||+++|+|+ |||+|||.... ..+.+.+++++++++||+.+|+++|++++. |.
T Consensus 103 --------~~~~~~~~~~~~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~- 171 (291)
T 1egz_A 103 --------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWS- 171 (291)
T ss_dssp --------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHH-
T ss_pred --------chhHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCcc-
Confidence 1457899999999999999999998 99999998632 225799999999999999999999999753 32
Q ss_pred CChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-C-CCHH
Q 019395 218 ADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-D-ASKQ 295 (341)
Q Consensus 218 ~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-~-~~~~ 295 (341)
.+.......+..++|+||++|.|.+.. .+.+.. .+. +.+..+.||+|||||+..... + .+.+
T Consensus 172 ~~~~~~~~~p~~~~~~~~s~H~Y~~~~--------~~~~~~-------~~~-~~~~~~~Pv~igEfG~~~~~~~g~~~~~ 235 (291)
T 1egz_A 172 QNVDEASRDPINAKNIAYTLHFYAGTH--------GESLRN-------KAR-QALNNGIALFVTEWGTVNADGNGGVNQT 235 (291)
T ss_dssp TCHHHHHTSCCCSSSEEEEEEEETTTC--------CHHHHH-------HHH-HHHHTTCCEEEEEEESSCTTSCSCCCHH
T ss_pred cccchhhcCCCCCCCEEEEEEecCCCC--------hHHHHH-------HHH-HHHHCCCcEEEecccCcCCCCCCCcCHH
Confidence 222222222223478999999997521 111111 111 123346789999999865321 1 2233
Q ss_pred HHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 296 DYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
.. ..+++.+++.++||++|+|+..+
T Consensus 236 ~~----~~~~~~~~~~~~g~~~W~~~~~~ 260 (291)
T 1egz_A 236 ET----DAWVTFMRDNNISNANWALNDKN 260 (291)
T ss_dssp HH----HHHHHHHHHTTCCEEEEEECCSS
T ss_pred HH----HHHHHHHHHCCCeEEEEecCCCC
Confidence 33 33445666788999999999754
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-33 Score=258.37 Aligned_cols=217 Identities=15% Similarity=0.224 Sum_probs=161.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.|+++|+|+||||+.. ++++++..++.|+++|++|.++||+||||+|..+|.++
T Consensus 57 ~~~i~~lk~~G~N~VRip~~~--------~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~------------- 115 (345)
T 3jug_A 57 STAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDS------------- 115 (345)
T ss_dssp HHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC-------------
T ss_pred HHHHHHHHHcCCCEEEEEecC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc-------------
Confidence 579999999999999999851 23566778999999999999999999999999865311
Q ss_pred CchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 223 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~ 223 (341)
....++++++|+.|++|||++ +.|+ |||+|||.. ..+...|.+++++++++||+++|+++|++++..++.+...+
T Consensus 116 --~~~~~~~~~~w~~iA~ryk~~~~~Vi-~el~NEP~~-~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~~~~~ 191 (345)
T 3jug_A 116 --RSDLDRAVDYWIEMKDALIGKEDTVI-INIANEWYG-SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSI 191 (345)
T ss_dssp --HHHHHHHHHHHHHTHHHHTTCTTTEE-EECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHH
T ss_pred --HHHHHHHHHHHHHHHHHHcCCCCeEE-EEecCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccccchhh
Confidence 145789999999999999998 5665 999999996 34567899999999999999999999999964333343221
Q ss_pred -------hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHH
Q 019395 224 -------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296 (341)
Q Consensus 224 -------~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~ 296 (341)
+. .++.+|+||++|.|.... .+.+ .+.. .+. +.+..+.|+||||||+.......
T Consensus 192 ~~~~~~~~~-~dp~~nlvys~H~Y~~~g-----~~~~----~~~~----~~~-~~~~~g~Pv~igEfG~~~~~~~~---- 252 (345)
T 3jug_A 192 HDYGQDVFN-ADPLKNTIFSIHMYEYAG-----GDAN----TVRS----NID-RVIDQDLALVIGEFGHRHTDGDV---- 252 (345)
T ss_dssp HHHHHHHHH-TCTTCCEEEEEEESTTTT-----SSHH----HHHH----HHH-HHHTTTCCEEEEEECCCCCC--C----
T ss_pred ccchhhhcc-cCCccceEEEEEecCCCC-----CCHH----HHHH----HHH-HHHHcCCcEEEECcCCCCCCCCH----
Confidence 21 245789999999995321 1111 1111 122 23345778999999987642211
Q ss_pred HHHHHHHHHHHHccCCCcEEEeccccCCCCCC
Q 019395 297 YQRFANAQLDVYGRATFGWAYWAHKCEANHWS 328 (341)
Q Consensus 297 ~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W~ 328 (341)
.++.+++.+++++++|++|+|+..+..|+
T Consensus 253 ---~~~~~l~~~~~~~i~w~~W~~~~~~~~~~ 281 (345)
T 3jug_A 253 ---DEDTILSYSEETGTGWLAWSWKGNSAEWD 281 (345)
T ss_dssp ---CHHHHHHHHHHHTCEEEESCSSCCCGGGG
T ss_pred ---HHHHHHHHHHHcCCEEEEEEEECCCCCcc
Confidence 23566666777889999999997764333
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=254.49 Aligned_cols=211 Identities=15% Similarity=0.253 Sum_probs=157.3
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
+++||+.||++|+|+||||+.. +..|.++.+++|+++|++|.++||+||||+|..++.++
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~------------ 92 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS------------ 92 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC------------
T ss_pred hHHHHHHHHHcCCCEEEEEecC--------CCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc------------
Confidence 4889999999999999999962 12455568999999999999999999999999875421
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CCCCChh
Q 019395 144 EWGDSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADHK 221 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~~~~~~ 221 (341)
....+++.++|+.|++||+++ +.| +|||+|||.. ..+...|.+++++++++||+++|+++|++++. |.. ...
T Consensus 93 ---~~~~~~~~~~w~~ia~~y~~~~~~v-~~el~NEP~~-~~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~-~~~ 166 (294)
T 2whl_A 93 ---RSDLNRAVDYWIEMKDALIGKEDTV-IINIANEWYG-SWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQ-YPQ 166 (294)
T ss_dssp ---HHHHHHHHHHHHHTHHHHTTCTTTE-EEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT-BTH
T ss_pred ---chhHHHHHHHHHHHHHHHcCCCCeE-EEEecCCCCC-CCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC-Cch
Confidence 156789999999999999998 556 6999999985 34556789999999999999999999999853 432 211
Q ss_pred -------hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH
Q 019395 222 -------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK 294 (341)
Q Consensus 222 -------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~ 294 (341)
.++ ..++.+|+++++|.|.++.. . .+.+. . .+..+ +..+.||+|||||+... ..
T Consensus 167 ~~~~~~~~~~-~~d~~~n~v~s~H~Y~~~~~-----~-~~~~~---~----~~~~~-~~~~~Pv~igEfG~~~~--~~-- 227 (294)
T 2whl_A 167 SIHDYGQDVF-NADPLKNTMFSIHMYEYAGG-----D-ANTVR---S----NIDRV-IDQDLALVIGEFGHRHT--DV-- 227 (294)
T ss_dssp HHHHHHHHHH-HTCTTCCEEEEEEESTTTTS-----S-HHHHH---H----HHHHH-HTTTCCEEEEEECCCCC--CC--
T ss_pred hhhhhhhccc-cCCCcCCEEEEEEeccCCCC-----c-HHHHH---H----HHHHH-HHCCCCEEEEccCCCCC--Cc--
Confidence 121 11345789999999975431 1 11111 1 11122 23477899999998664 11
Q ss_pred HHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 295 QDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
+++.+++.++++++||++|+|+..+
T Consensus 228 -----~~~~~~~~~~~~~i~w~~W~~~~~~ 252 (294)
T 2whl_A 228 -----DEDTILSYSEETGTGWLAWSWKGNS 252 (294)
T ss_dssp -----CHHHHHHHHHHHTCEEEESCSSCCC
T ss_pred -----cHHHHHHHHHHcCCeEEEEEecCCC
Confidence 2455666667788999999999765
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-33 Score=255.07 Aligned_cols=219 Identities=15% Similarity=0.230 Sum_probs=157.9
Q ss_pred HHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCC
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEW 145 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w 145 (341)
+||+.||++|+|+||||+.+.. .+....++.++++|++|.++||+||||+|..++.++. +.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~--------~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~---~~-------- 96 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGV--------RWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ---SG-------- 96 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSS--------SSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS---TT--------
T ss_pred HHHHHHHHcCCCEEEEEccCCc--------ccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCC---Cc--------
Confidence 7999999999999999997421 1112247999999999999999999999998765432 00
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChh---
Q 019395 146 GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK--- 221 (341)
Q Consensus 146 ~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~--- 221 (341)
+...+++.++|+.|++||+++|.+++|||+|||.....+ .+.|..++++++++||+.+|+++|++++...+.++.
T Consensus 97 -~~~~~~~~~~w~~ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~ 175 (302)
T 1bqc_A 97 -ASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTM 175 (302)
T ss_dssp -CCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHH
T ss_pred -hhhHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhh
Confidence 245789999999999999999999999999999852211 134899999999999999999999998643333332
Q ss_pred -----hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHH
Q 019395 222 -----ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296 (341)
Q Consensus 222 -----~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~ 296 (341)
.++. .+..+++++++|.|.+++. .+.++. . +..+.+ .+.||+|||||+........
T Consensus 176 ~~~~~~~~~-~~~~~~~v~s~H~Y~~~~~-------~~~~~~---~----~~~~~~-~~~Pv~igEfG~~~~~~~~~--- 236 (302)
T 1bqc_A 176 RNNADQVYA-SDPTGNTVFSIHMYGVYSQ-------ASTITS---Y----LEHFVN-AGLPLIIGEFGHDHSDGNPD--- 236 (302)
T ss_dssp HHHHHHHHH-TCTTCCEEEEEEESGGGCS-------HHHHHH---H----HHHHHH-HTCCEEEEEECCTTSTTCCC---
T ss_pred hccchhccc-cCCCCCEEEEEEEccCCCC-------HHHHHH---H----HHHHHH-CCCCEEEEeecCCCCCCchH---
Confidence 1221 2346799999999987532 111111 1 111222 36689999999876432111
Q ss_pred HHHHHHHHHHHHccCCCcEEEeccccCCCCC
Q 019395 297 YQRFANAQLDVYGRATFGWAYWAHKCEANHW 327 (341)
Q Consensus 297 ~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W 327 (341)
++..++.++++++||++|+|+.....+
T Consensus 237 ----~~~~~~~~~~~~i~~~~W~~~~~~~~~ 263 (302)
T 1bqc_A 237 ----EDTIMAEAERLKLGYIGWSWSGNGGGV 263 (302)
T ss_dssp ----HHHHHHHHHHHTCEEEESCSSCCCTTT
T ss_pred ----HHHHHHHHHHcCCEEEEeeccCCCCCc
Confidence 344555566678999999999765443
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=252.34 Aligned_cols=219 Identities=19% Similarity=0.277 Sum_probs=156.6
Q ss_pred hccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCcccc-hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGG-SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 61 ~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~~-~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
.+++++||+.|+ ++|+|+||||+.|. . .+.+.+++ .+++||++|++|.++||+||||+|+.+++ .
T Consensus 41 ~~~~~~d~~~l~~~~G~N~vRi~~~~~---~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g--------~ 107 (306)
T 2cks_A 41 HCLTDSSLDALAYDWKADIIRLSMYIQ---E--DGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPG--------D 107 (306)
T ss_dssp GGCSHHHHHHHHHTSCCSEEEEEEESS---T--TSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSC--------C
T ss_pred cCCCHHHHHHHHHHcCCCEEEEEeeec---C--CCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCC--------C
Confidence 456799999886 68999999999863 1 11233443 78999999999999999999999997421 0
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGP 217 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~~ 217 (341)
+ ..+.+++.++|+.|++||+++|+|+ |||+|||.. .+...+..++++++++||+++|+++|++++. |..
T Consensus 108 ----~---~~~~~~~~~~~~~ia~~y~~~~~V~-~el~NEP~~--~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~ 177 (306)
T 2cks_A 108 ----P---HYNLDRAKTFFAEIAQRHASKTNVL-YEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSS 177 (306)
T ss_dssp ----G---GGGHHHHHHHHHHHHHHHTTCSSEE-EECCSCCCS--SCHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHS
T ss_pred ----c---ccCHHHHHHHHHHHHHHhCCCCcEE-EEcCCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCEEEECCCCccc
Confidence 0 1356789999999999999999998 999999985 3567899999999999999999999999852 221
Q ss_pred C------ChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC-C
Q 019395 218 A------DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-K 290 (341)
Q Consensus 218 ~------~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~-~ 290 (341)
. +.......+...+|+||++|+|.++.. +...+.+ .... .+.||+|||||+.... .
T Consensus 178 ~~~~~~~~~~~~~~~p~~~~~~v~s~H~Y~~~~~-------~~~~~~~--------~~~~--~~~Pv~igEfG~~~~~g~ 240 (306)
T 2cks_A 178 LGVSEGSGPAEIAANPVNASNIMYAFHFYAASHR-------DNYLNAL--------REAS--ELFPVFVTEFGTETYTGD 240 (306)
T ss_dssp TTGGGTCCTHHHHHSCCSCSSEEEEEEEETTTCC-------HHHHHHH--------HHHH--HHSCEEEEEEESSCTTSC
T ss_pred cccccccchhhhhcCCCCcCCeEEEEeeCCCCcc-------HHHHHHH--------HHHh--cCCcEEEEcccCCcCCCC
Confidence 1 122223333345789999999987521 1111111 1111 2568999999986531 1
Q ss_pred -CCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 291 -DASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
..+.+...+| ++.+++.++||++|+|+..
T Consensus 241 ~~~~~~~~~~~----~~~~~~~~ig~~~W~~~~~ 270 (306)
T 2cks_A 241 GANDFQMADRY----IDLMAERKIGWTKWNYSDD 270 (306)
T ss_dssp SCCCHHHHHHH----HHHHHHHTCCEEEECCSCC
T ss_pred CCcCHHHHHHH----HHHHHHcCCCeEEEecCCC
Confidence 1233333333 4556667899999999865
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=263.93 Aligned_cols=236 Identities=18% Similarity=0.246 Sum_probs=169.3
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
.++||+.||++|+|+||+|+.|+.+... ..+..++.||++|++|.++||+||||+|..++.++.
T Consensus 87 ~~~di~~ik~~G~N~VRi~~~~~~~~~~-----~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~----------- 150 (359)
T 4hty_A 87 SKKHFEVIRSWGANVVRVPVHPRAWKER-----GVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSE----------- 150 (359)
T ss_dssp SHHHHHHHHHTTCSEEEEEECHHHHHHH-----HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTT-----------
T ss_pred CHHHHHHHHhcCCCEEEEeccHHHhhcc-----CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcc-----------
Confidence 5899999999999999999988654321 135689999999999999999999999998654321
Q ss_pred CCc-h---hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-----CCChHHHHHHHHHHHHHHHhcCCCceEEEeCC
Q 019395 144 EWG-D---SNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214 (341)
Q Consensus 144 ~w~-~---~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~ 214 (341)
.|. + ...+.++++|+.|++|||++|.|++|||+|||... ..+.+.++.++++++++||+.+|+++|++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~ 230 (359)
T 4hty_A 151 MFQNNSYHTTKGETFDFWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGF 230 (359)
T ss_dssp EESSGGGCCCHHHHHHHHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECH
T ss_pred cccCCcchhHHHHHHHHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCc
Confidence 132 2 34789999999999999999999999999999852 24567899999999999999999999999864
Q ss_pred CCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-CCC
Q 019395 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-DAS 293 (341)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-~~~ 293 (341)
..+.+...+...+...+|++|++|.|.++.. .+... .+.+.+..+. .+.||||||||...... +..
T Consensus 231 ~w~~~~~~~~~~p~~~~n~~ys~H~Y~~~~~----~~~~~-------~~~~~~~~~~--~~~Pv~vtEfG~~~~~g~g~~ 297 (359)
T 4hty_A 231 NWAYDLKEAAANPIDRQNIAYVSHPYPQKVG----APYQA-------NWERDFGFMA--DKYPVFATEIGYQRATDKGAH 297 (359)
T ss_dssp HHHTCCHHHHHSCCSSSSEEEECCCCTTSSC----SSHHH-------HHHHHTGGGG--GTSCEEEEEECCBCTTSTTCC
T ss_pred ccccccchhhcCCCCCCCEEEEEEeCCCCCC----cchHH-------HHHHHHHHHh--cCCCEEEecccCCCCCCCCcc
Confidence 3333444444444456899999999987431 11111 1111222222 25689999999864311 110
Q ss_pred --HHHHHHHHHHHHHHHccCCCcEEEeccccCC-----CCCC
Q 019395 294 --KQDYQRFANAQLDVYGRATFGWAYWAHKCEA-----NHWS 328 (341)
Q Consensus 294 --~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-----~~W~ 328 (341)
.....+|.+..++.++++++||++|||.+.+ .+|+
T Consensus 298 ~~~~~~~~y~~~~~~~~~~~~i~~~~Ws~~~~~~~~~~~~w~ 339 (359)
T 4hty_A 298 IPVIDDGSYGPRITDYFNSKGISWVAWVFDPDWSPQLFTDYQ 339 (359)
T ss_dssp TTSBCCSTHHHHHHHHHHHHTCEEEEEEESSSSSSCSBSCTT
T ss_pred cccccHHHHHHHHHHHHHHcCCeEEEEEeCCCCcchhhhccc
Confidence 0011234444455555678999999999765 4666
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-32 Score=263.45 Aligned_cols=215 Identities=15% Similarity=0.215 Sum_probs=158.1
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCc
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
.+++||+.||++|+|+||||+.. +.+|.++.+++|+++|++|.++||+||||+|..++.++
T Consensus 40 ~~~~di~~ik~~G~N~VRipv~~--------g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~----------- 100 (464)
T 1wky_A 40 QATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS----------- 100 (464)
T ss_dssp GHHHHHHHHHTTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC-----------
T ss_pred chHHHHHHHHHCCCCEEEEEcCC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC-----------
Confidence 35899999999999999999962 12455668999999999999999999999999875321
Q ss_pred cCCchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChh
Q 019395 143 QEWGDSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHK 221 (341)
Q Consensus 143 ~~w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~ 221 (341)
....+++.++|+.||+||+++ +.| +|||+|||.. ..+.+.|.+++++++++||+++|+++|++++...+....
T Consensus 101 ----~~~~~~~~~~w~~iA~ryk~~~~~V-i~eL~NEP~~-~~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~~~~~ 174 (464)
T 1wky_A 101 ----IASLNRAVDYWIEMRSALIGKEDTV-IINIANEWFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQ 174 (464)
T ss_dssp ----HHHHHHHHHHHHHTGGGTTTCTTTE-EEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTH
T ss_pred ----hHHHHHHHHHHHHHHHHHcCCCCeE-EEEeccCCCC-CCCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcCcccc
Confidence 256789999999999999998 455 6999999986 345668999999999999999999999998543222211
Q ss_pred -------hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH
Q 019395 222 -------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK 294 (341)
Q Consensus 222 -------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~ 294 (341)
.++ ..++.+|+||++|.|.++.. . .+ .+.. .+..+ ...+.||+|||||+........
T Consensus 175 ~~~~~~~~l~-~~dp~~niv~s~H~Y~~~g~-----~-~~---~i~~----~~~~~-~~~g~Pv~igEfG~~~~~~~~~- 238 (464)
T 1wky_A 175 SIHDYGREVF-NADPQRNTMFSIHMYEYAGG-----N-AS---QVRT----NIDRV-LNQDLALVIGEFGHRHTNGDVD- 238 (464)
T ss_dssp HHHHHHHHHH-HTCTTCCEEEEEEESTTTSS-----S-HH---HHHH----HHHHH-HTTTCCEEEEEECSEETTEECC-
T ss_pred cccccchhcc-ccCCCCCEEEEEEEECCCCC-----C-HH---HHHH----HHHHH-HHcCCCEEEECccCCCCCCcHH-
Confidence 121 12345799999999975421 1 11 1211 11122 2346789999999865321111
Q ss_pred HHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 295 QDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
.+..++.++++++||++|+|+..+
T Consensus 239 ------~~~~~~~~~~~~igw~~W~~~~~~ 262 (464)
T 1wky_A 239 ------ESTIMSYSEQRGVGWLAWSWKGNG 262 (464)
T ss_dssp ------HHHHHHHHHHTTCEEEESCSSCCC
T ss_pred ------HHHHHHHHHHcCCeEEEEEEcCCC
Confidence 245566667788999999999764
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.7e-31 Score=256.01 Aligned_cols=224 Identities=16% Similarity=0.210 Sum_probs=153.4
Q ss_pred HHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCccc-chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVG-GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 58 ~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~-~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
||.+|++++||+.||++|||+||||+.|+...-+.+ +..++ ..+++||++|++|.++||+||||+|... ++
T Consensus 35 ~w~~~~~~~d~~~i~~~G~N~VRipv~~~~~~~~~~-~~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~~--~~----- 106 (491)
T 2y8k_A 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAP-GSKAPGYAVNEIDKIVERTRELGLYLVITIGNGA--NN----- 106 (491)
T ss_dssp SSSCCCCHHHHGGGGGGTCCEEEEEEEECCTTTTST-TCCCTTTTHHHHHHHHHHHHHHTCEEEEEEECTT--CT-----
T ss_pred CcCCCCCHHHHHHHHHcCCCEEEECceeecccccCC-CccChhHHHHHHHHHHHHHHHCCCEEEEECCCCC--CC-----
Confidence 566678899999999999999999998764211111 12333 3599999999999999999999999731 11
Q ss_pred CCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-CCh------HHHHHHHHHHHHHHHhcCCCceE
Q 019395 137 ATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-VAL------DTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 137 g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-~~~------~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
+ ..+.++++++|+.||+|||++|.|+ |||+|||.... ... +.|.+++++++++||+++|+++|
T Consensus 107 ~---------~~~~~~~~~~w~~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I 176 (491)
T 2y8k_A 107 G---------NHNAQWARDFWKFYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPV 176 (491)
T ss_dssp T---------CCCHHHHHHHHHHHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCE
T ss_pred c---------cccHHHHHHHHHHHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 0 0346889999999999999999998 99999997522 111 23999999999999999999999
Q ss_pred EEeCC--CCCC-Ch----hhhh--------hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC
Q 019395 210 IMSNR--LGPA-DH----KELL--------SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 210 ~~~~~--~~~~-~~----~~~~--------~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
++++- +.+. ++ ..+. ..+....|+||++|.|.+.. . .+. .+..+. ..
T Consensus 177 ~v~g~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~n~v~s~H~Y~~~~---------~----~~~----~l~~~~-~~ 238 (491)
T 2y8k_A 177 LLFSYAVFGGKGGAAEALKDIRAFNKAVFGNENAVWTNEAVAFHGYAGWQ---------E----TTI----AVEELL-KA 238 (491)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHHHHHHHHSSTTCCCSSEEEEEESTTCHH---------H----HHH----HHHHHH-HT
T ss_pred EEecccccCCCcccchhhcccccccccccccCCCCCCceeEEEeeCCCCc---------c----cHH----HHHHHH-Hc
Confidence 99741 1000 01 1110 01124578999999997531 1 111 111222 34
Q ss_pred CCceEEEeecCCC-C-CCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 275 GPLTFVGEWTCEW-N-VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 275 ~~pv~vGE~g~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
+.||+|||||+.. . ....... +.++.++++++||++|+|++.+
T Consensus 239 g~Pv~igEfG~~~~~~~~~~~~~-------~~~~~~~~~~i~w~~W~~~~~~ 283 (491)
T 2y8k_A 239 GYPCFMTEYAGGAWGSGMGGLDV-------ELTYELERLGVSWLTFQYIPPT 283 (491)
T ss_dssp TCCEEEEECCCC--CCSCSSCCH-------HHHHHHHHHTCEEEEEEECTTC
T ss_pred CCCEEEEeecccccCCCCcchhH-------HHHHHHHhcCcceEEEeccCCC
Confidence 6789999999754 1 1111111 2234566678999999997543
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=229.25 Aligned_cols=249 Identities=16% Similarity=0.139 Sum_probs=166.7
Q ss_pred HHHHHHHHHCCCCEEEcCccc---------ccccCCCCCCCcc--------cchHHHHHHHHHHHHHcCCeEEEecCCC-
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---------WIANDPTPPKPFV--------GGSSKVLDNAFDWAEKYGVKVIVDLHAA- 126 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---------~~~~~~~~~~~~~--------~~~l~~ld~~i~~a~~~gi~vildlh~~- 126 (341)
+++|+.||++|+|+||+++.+ |..++|.+ +.|+ ++.++.||++|++|+++||+|||+||..
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~-G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w 124 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEP-GVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNW 124 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBT-TBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSS
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCC-CcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 889999999999999998764 34556654 4666 7789999999999999999999999963
Q ss_pred --CCCCCCC-CCCCCCCCccCCc-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCC-CChHHHHHHH
Q 019395 127 --PGSQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPG-VALDTLKSYY 193 (341)
Q Consensus 127 --~g~~~~~-~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~--------y~~~~~v~~~el~NEP~~~~-~~~~~~~~~~ 193 (341)
.|+.... ...|......+|. +..++.+.++++.|++| |+++|.|++|+|.|||.... .+.+.+..|+
T Consensus 125 ~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~ 204 (383)
T 3pzg_A 125 DDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWV 204 (383)
T ss_dssp STTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHH
T ss_pred cccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHH
Confidence 1211100 0001111122344 78899999999999999 99999999999999998633 2346899999
Q ss_pred HHHHHHHHhcCCCceEEEeC-CCCC-C----------Chh-------hhhhccCCCCcEEEEeeecCCCCccccCccchh
Q 019395 194 KAGYDAVRKYTSTAYVIMSN-RLGP-A----------DHK-------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 254 (341)
Q Consensus 194 ~~~~~aIR~~~p~~~v~~~~-~~~~-~----------~~~-------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~ 254 (341)
++++++||+.+|+++|+++. ++.. + .+. .|........-.++++|.|+-.. . .+.+.
T Consensus 205 ~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~w--~--~~~~~ 280 (383)
T 3pzg_A 205 KEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHW--G--VSPEN 280 (383)
T ss_dssp HHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGGGTBTTTSCCHHHHHTCTTCCSEEEEECHHHH--T--CCGGG
T ss_pred HHHHHHHHhhCCCceEEEcccccccccccccccCCCCccccccccCCChHhhcCCCCCCEEEEEeccccc--C--cChHH
Confidence 99999999999999999983 3321 0 000 11111112233589999996311 1 22233
Q ss_pred hhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH-HHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 255 NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK-QDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.++.....+...+.... ..++||+++|||...... ..+ ..+..++... ++..++|++||++...
T Consensus 281 ~~~~~~~wi~~h~~~a~-~~gKPvv~eEfG~~~~~~-~~r~~~~~~~~~~~---~~~~~~g~~~Wq~~~~ 345 (383)
T 3pzg_A 281 YAQWGAKWIEDHIKIAK-EIGKPVVLEEYGIPKSAP-VNRTAIYRLWNDLV---YDLGGDGAMFWMLAGI 345 (383)
T ss_dssp HHHHHHHHHHHHHHHHH-HHTCCEEEEEECCCTTSS-SCHHHHHHHHHHHH---HHTTCCEEEESCBCCB
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCEEEEecCCCCCCh-hHHHHHHHHHHHHH---HHhCCcceEEEEecCc
Confidence 33333333333333333 347789999999865322 233 3344554443 3456789999999866
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=225.68 Aligned_cols=256 Identities=13% Similarity=0.125 Sum_probs=162.8
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC---CCCCCCC----
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP---GSQNGNE---- 134 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~---g~~~~~~---- 134 (341)
++||+.||++|+|+||+++.- |...++.+ +.|+++.++.||++|++|.++||+|||+||+.. |+.....
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~-g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~~w~~ 123 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAP-GVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAV 123 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEET-TEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHHHHHh
Confidence 899999999999999997631 33334433 468888999999999999999999999999632 1100000
Q ss_pred CCCC--CCCccCCc-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC-ChHHHHHHHHHHHHHHHh
Q 019395 135 HSAT--RDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRK 202 (341)
Q Consensus 135 ~~g~--~~~~~~w~-~~~~~~~~~~~~~la~~--------y~~~~~v~~~el~NEP~~~~~-~~~~~~~~~~~~~~aIR~ 202 (341)
..|. ......|. +..++.+.++++.|++| |+++|.|++|+|+|||..... +.+.+..|+++++++||+
T Consensus 124 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~ 203 (373)
T 1rh9_A 124 QRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKS 203 (373)
T ss_dssp HTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHHHHHh
Confidence 0000 00122344 77889999999999999 999999999999999986322 346899999999999999
Q ss_pred cCCCceEEEeC-CCCCC-----Chh------hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhh
Q 019395 203 YTSTAYVIMSN-RLGPA-----DHK------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV 270 (341)
Q Consensus 203 ~~p~~~v~~~~-~~~~~-----~~~------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (341)
.+|+++|+++. ++... +.. .+..........++++|.|... .....+...............+..
T Consensus 204 ~dp~~~v~~g~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~s~H~Y~~~--~~~~~~~~~~~~~~~~~l~~~~~~- 280 (373)
T 1rh9_A 204 IDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQ--WLPGLTQEAQDKWASQWIQVHIDD- 280 (373)
T ss_dssp HCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHH--HSTTSCHHHHHHHHHHHHHHHHHH-
T ss_pred hCCCceEEeCcccccCCCCCcCCccccccccchhhhccCCCcCeEEEeeCCcc--cCCCCCHHHHHHHHHHHHHHHHHH-
Confidence 99999999873 22111 111 1111011223358999999631 011111111111111111112222
Q ss_pred hccCCCceEEEeecCCCCCCCCCHHHHHHHHH----HHHHHHcc--CCCcEEEeccccCC
Q 019395 271 TTSNGPLTFVGEWTCEWNVKDASKQDYQRFAN----AQLDVYGR--ATFGWAYWAHKCEA 324 (341)
Q Consensus 271 ~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~Gw~~W~~k~~~ 324 (341)
.+..++|++|+|||......+.+.+....|++ .+.+++++ ...|+++|+|+..+
T Consensus 281 ~~~~~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 340 (373)
T 1rh9_A 281 SKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQG 340 (373)
T ss_dssp HHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTT
T ss_pred HHhcCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeEeeeecCCCC
Confidence 22336789999999865422334444445444 33333432 35899999998764
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=225.69 Aligned_cols=257 Identities=11% Similarity=0.117 Sum_probs=161.2
Q ss_pred HHHHHHHHHCCCCEEEcC-------ccc--ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCC---
Q 019395 65 DEDFKFLSSNGINAVRIP-------VGW--WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG--- 132 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-------i~~--~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~--- 132 (341)
++||+.||++|+|+||++ +.| |...++.+ +.|+++.++.||++|++|.++||+|||+||..-....+
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~-g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~~~~~Gg~~~ 143 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF-GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 143 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST-TCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCC-CccCHHHHHHHHHHHHHHHHCCCEEEEEccccccccCCchh
Confidence 899999999999999998 322 33344444 46888899999999999999999999999953110000
Q ss_pred --CCC--CCCC-----C--------CccCCc-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC--
Q 019395 133 --NEH--SATR-----D--------GFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-- 184 (341)
Q Consensus 133 --~~~--~g~~-----~--------~~~~w~-~~~~~~~~~~~~~la~~--------y~~~~~v~~~el~NEP~~~~~-- 184 (341)
.+. .+.. . ....|. +..++.+.++|+.|++| |+++|.|++|+|+|||.....
T Consensus 144 ~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp~~~~~~~ 223 (440)
T 1uuq_A 144 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 223 (440)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred hHHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCcccccCcc
Confidence 000 0000 0 012334 67788999999999999 999999999999999986321
Q ss_pred ---ChHHHHHHHHHHHHHHHhcCCCceEEEeC-CCCCC--ChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhh--
Q 019395 185 ---ALDTLKSYYKAGYDAVRKYTSTAYVIMSN-RLGPA--DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI-- 256 (341)
Q Consensus 185 ---~~~~~~~~~~~~~~aIR~~~p~~~v~~~~-~~~~~--~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~-- 256 (341)
+.+.+.+|+++++++||++||+++|+++. ++.+. +...+........-.++++|.|...............+
T Consensus 224 ~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~~~~~~~~ 303 (440)
T 1uuq_A 224 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPS 303 (440)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHhhCCCCeEEECCccccCCCCcchhhHHhccCCCCCEEEEEeCCCccccCCCccccccHHH
Confidence 34678999999999999999999999873 32111 11122221112233489999997532111111111111
Q ss_pred --HHHHhhhhhhhhhhhccCCCceEEEeecCCCCC----CCCCHHHHHHHHHHHHHHHc----c--CCCcEEEeccccC
Q 019395 257 --DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV----KDASKQDYQRFANAQLDVYG----R--ATFGWAYWAHKCE 323 (341)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~----~~~~~~~~~~~~~~~~~~~~----~--~~~Gw~~W~~k~~ 323 (341)
..+.......+ .+++..++|++|+|||..... .+.+.+...+|++..++++. + ..+|+++|+|...
T Consensus 304 ~~~~~~~~~~~~~-~~a~~~~kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~d~ 381 (440)
T 1uuq_A 304 AWEKAQNYMRAHI-DVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGY 381 (440)
T ss_dssp HHHHHHHHHHHHH-HHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEET
T ss_pred HHHHHHHHHHHHH-HHHHHhCCCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEEeeecCC
Confidence 11111111111 122334678999999986531 01234445566655443322 2 3579999999844
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-26 Score=214.49 Aligned_cols=242 Identities=18% Similarity=0.191 Sum_probs=153.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCC---------CC--CCCcc--cchHHHHHHHHHHHHHcCCeEEEecCCCC---C
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDP---------TP--PKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAP---G 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~---------~~--~~~~~--~~~l~~ld~~i~~a~~~gi~vildlh~~~---g 128 (341)
++||+.||++|+|+||+++.++....| .+ ...++ ++.++.||++|++|.++||+||||+|..- |
T Consensus 39 ~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~g 118 (344)
T 1qnr_A 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYG 118 (344)
T ss_dssp HHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTS
T ss_pred HHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCccccC
Confidence 899999999999999998754321111 11 11243 66899999999999999999999999631 1
Q ss_pred CCCCC-CCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 019395 129 SQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 129 ~~~~~-~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
+.+.. ...|.. ....|. +..++.+.++|+.|++||+++|.|++|+|.|||.....+.+.+..|+++++++||+++|+
T Consensus 119 ~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp~ 197 (344)
T 1qnr_A 119 GINAYVNAFGGN-ATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSN 197 (344)
T ss_dssp HHHHHHHHHCSC-TTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHhCCC-hhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCCC
Confidence 10000 000000 122344 677899999999999999999999999999999864445678999999999999999999
Q ss_pred ceEEEeC-CCCCC----Chh-------hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC
Q 019395 207 AYVIMSN-RLGPA----DHK-------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 207 ~~v~~~~-~~~~~----~~~-------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
++|+++. +++.. ... .+........-.++++|.|...... . .......+.. .+ ...+..
T Consensus 198 ~~v~~g~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~~~--~--~~~~~~~~~~----~~-~~~~~~ 268 (344)
T 1qnr_A 198 HLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT--N--YTWGNGWIQT----HA-AACLAA 268 (344)
T ss_dssp SEEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHTC--C--STHHHHHHHH----HH-HHHHHT
T ss_pred CEEEECCccccCCCCCccCCccccccCcHHHHhCCCCCCeEEeeeCCCccCc--c--chHHHHHHHH----HH-HHHHHc
Confidence 9999963 33111 000 1111111223458999999631100 0 0111111111 11 112334
Q ss_pred CCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 275 GPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 275 ~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
++|++|+|||+.... ......|++..++ .....|+++|+|..
T Consensus 269 ~kPv~l~E~G~~~~~----~~~~~~~~~~~~~--~~~~~g~~~W~~~d 310 (344)
T 1qnr_A 269 GKPCVFEEYGAQQNP----CTNEAPWQTTSLT--TRGMGGDMFWQWGD 310 (344)
T ss_dssp TSCEEEEEECCSSCH----HHHHHHHHHHHHT--STTEEEEEESCEEC
T ss_pred CCCEEEeecCCCCCC----CchHHHHHHHHHh--cCCCCceEEEeccC
Confidence 678999999986531 1223445443321 12335999999975
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.3e-25 Score=209.90 Aligned_cols=233 Identities=12% Similarity=0.100 Sum_probs=146.4
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCC---CCCCC--cccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDP---TPPKP--FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~---~~~~~--~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
.++||+.||++|+|+||+++.++....| .++.. .++..++.+|++|++|.++||+|||++|..... ..|.
T Consensus 47 ~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~~~~-----~~g~ 121 (353)
T 2c0h_A 47 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVK-----QSTH 121 (353)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCC-----CTTH
T ss_pred HHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCcccc-----CCCc
Confidence 3899999999999999999987644333 11111 123689999999999999999999999752100 0010
Q ss_pred CCCccCCc-h-hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---------------------------CChHHH
Q 019395 139 RDGFQEWG-D-SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---------------------------VALDTL 189 (341)
Q Consensus 139 ~~~~~~w~-~-~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---------------------------~~~~~~ 189 (341)
......+. + ...+.+.+.|+.|++||+++|.|++|+|+|||.... ...+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 201 (353)
T 2c0h_A 122 YRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEI 201 (353)
T ss_dssp HHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHH
T ss_pred ccccceEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHHHH
Confidence 00000111 2 233344577799999999999999999999998530 122679
Q ss_pred HHHHHHHHHHHHhcCCCceEEEeC-C-CCCCCh----hhh-----hhc-cCCCCcE-EEEeeecCCCCccccCccchhhh
Q 019395 190 KSYYKAGYDAVRKYTSTAYVIMSN-R-LGPADH----KEL-----LSF-ASGLSRV-VIDVHYYNLFSNNFNGLNVQQNI 256 (341)
Q Consensus 190 ~~~~~~~~~aIR~~~p~~~v~~~~-~-~~~~~~----~~~-----~~~-~~~~~~~-v~~~H~Y~~~~~~~~~~~~~~~~ 256 (341)
..++++++++||+++|+++|+++. . +...+. ..+ ... ....+++ ++++|.|.+... .. ...
T Consensus 202 ~~~~~~~~~~Ir~~dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~D~~s~H~Y~~~~~-~~-----~~~ 275 (353)
T 2c0h_A 202 GRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNH-FG-----NES 275 (353)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTB-CC-----TTC
T ss_pred HHHHHHHHHHHHhhCCCCeEEECCccccCCCcccCcCCCCcchhhhhhccccCCCCCEEEEeeCCCccc-cc-----ccC
Confidence 999999999999999999999874 1 211110 001 000 0123455 999999975321 00 000
Q ss_pred HHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCC-CcEEEecccc
Q 019395 257 DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRAT-FGWAYWAHKC 322 (341)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Gw~~W~~k~ 322 (341)
.. ...+..+ ..++|++|+|||+.... +. ++.+.++.+.+.+ +|+++|+|..
T Consensus 276 ~~-----~~~~~~~--~~~~P~~i~E~G~~~~~-~~-------~~~~~~~~~~~~g~~g~~~W~~~d 327 (353)
T 2c0h_A 276 PF-----KHSFSNF--RLKKPMVIGEFNQEHGA-GM-------SSESMFEWAYTKGYSGAWTWSRTD 327 (353)
T ss_dssp TT-----SSCGGGG--CCSSCEEEEECCGGGST-TC-------CHHHHHHHHHHTTCSEEEESCSSS
T ss_pred cc-----cchHHHh--cCCCCEEEEecCCCCCC-Cc-------cHHHHHHHHHHCCCcEEEEEEEcC
Confidence 00 0001111 23578999999986521 11 2223334444455 8999999986
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.3e-24 Score=196.27 Aligned_cols=234 Identities=17% Similarity=0.127 Sum_probs=149.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC-------CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT-------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA 137 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~-------~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g 137 (341)
++||+.||++|+|+||++++......|. .+..+.+..++.+|+++++|.++||+||||+|.......+..
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~--- 121 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHN--- 121 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGG---
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCC---
Confidence 8999999999999999988653222211 112234578999999999999999999999997643321100
Q ss_pred CCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------------------------CCChHH
Q 019395 138 TRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDT 188 (341)
Q Consensus 138 ~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~---------------------------~~~~~~ 188 (341)
.....+. +...+.+.++|+.+++|||++|.|++|+|.|||... ....+.
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (351)
T 3vup_A 122 --RLDGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQD 199 (351)
T ss_dssp --HHHHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHH
T ss_pred --ccccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhh
Confidence 0000111 344566778999999999999999999999999641 123467
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEeC-CC-CCCCh--------h---hhhhccCCCCcEEEEeeecCCCCccccCccchhh
Q 019395 189 LKSYYKAGYDAVRKYTSTAYVIMSN-RL-GPADH--------K---ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQN 255 (341)
Q Consensus 189 ~~~~~~~~~~aIR~~~p~~~v~~~~-~~-~~~~~--------~---~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~ 255 (341)
+..|++++.++||+.+|+++|.++. ++ ..... . .+..........++++|.|...... ....
T Consensus 200 ~~~~~~~~~~~ik~~dp~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~~-~~~~---- 274 (351)
T 3vup_A 200 ILRFLNWQADAIKTTDPGALVTMGVWNPKSNTDHFNMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGKW-DEVA---- 274 (351)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEESSGGGSCSSTTCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTBC-CTTC----
T ss_pred HHHHHHHHHHHhhccCCCCeeEecCcccccccCccccccccccccccccccccccccceeeeeccCccccc-chhh----
Confidence 8999999999999999999999873 11 10000 0 1111112344568999999643211 1100
Q ss_pred hHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 256 IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.... .......++||+|||||+..... ...+ .+++. +++....|.++|+|...
T Consensus 275 -~~~~-------~~~~~~~~kPvii~Efg~~~~~~-~~~~---~~~~~---~~~~~~~G~~~W~~~d~ 327 (351)
T 3vup_A 275 -PFTH-------QASDYGLHKPIVVGEFWEQDGGG-MTIT---QMFNY---VYNHGYAGAWSWHLVQR 327 (351)
T ss_dssp -GGGS-------CGGGGCCSSCEEEEECCGGGSTT-CCHH---HHHHH---HHHTTCSEEEEECHHHH
T ss_pred -hHHH-------HHHhcCCCCcEEEEeCCCCCCCC-cCHH---HHHHH---HHhcCCeEEEEEeeecC
Confidence 0000 01122346789999999765322 2222 22222 23445679999999854
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-22 Score=194.66 Aligned_cols=183 Identities=16% Similarity=0.178 Sum_probs=132.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+... .. ...+....+.|. +||+.+ ++|++.|+++|+|++|++|.|
T Consensus 35 G~Atsa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~si~W 104 (468)
T 2j78_A 35 GVATASYQIEGSPLADGAGMSIWHTFSHT-PG---NVKNGDTGDVAC----DHYNRW--KEDIEIIEKLGVKAYRFSISW 104 (468)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeeCcHHHhcCCcCCCCCCCeeeEEeccc-CC---cccCCCCCcccc----cccccC--HHHHHHHHHcCCCEEEeccCH
Confidence 568899999 99854 789998753211 00 112222334455 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..+ .|...+.+++++++.++++|+.|.++||.+||+||++..++...+. ..|. +..++.|.++++.+++||
T Consensus 105 ~Ri-~P~G~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~-------ggw~~~~~~~~F~~ya~~~~~~~ 176 (468)
T 2j78_A 105 PRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLK-------GGWANREIADWFAEYSRVLFENF 176 (468)
T ss_dssp HHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTT-------TGGGSTTHHHHHHHHHHHHHHHH
T ss_pred HHh-CCCCCCCcCHHHHHHHHHHHHHHHhcCCEEEEEccCCCCchhhhhc-------CCCCChHHHHHHHHHHHHHHHHh
Confidence 654 4553457888999999999999999999999999987544321111 1266 788999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
++ .|..|.++|||.. ++.. . ..+......+++++|+.+|+..|.+
T Consensus 177 gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 241 (468)
T 2j78_A 177 GD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGI 241 (468)
T ss_dssp TT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CC--ccceEEEccccchhhccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 99 5556899999974 1211 1 1133334567889999988755443
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-21 Score=182.69 Aligned_cols=284 Identities=12% Similarity=0.034 Sum_probs=167.9
Q ss_pred CceeeeccCCCCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccccc
Q 019395 8 ETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWI 87 (341)
Q Consensus 8 ~~~~~~~~~~~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~ 87 (341)
.|||+..|.+-. ....|-.|.+.+.- . + +... . ... +++|+.||++|+|+||+...+..
T Consensus 4 ~GFv~~~g~~f~-~nG~~~~~~G~N~~----~--~----~~~~-~----~~~-----~~~l~~~~~~G~N~iR~w~~~~g 62 (387)
T 4awe_A 4 KGFVTTEGDHFK-LDGKDFYFAGSNAY----Y--F----PFND-Q----PDI-----EKGMTAARAAGLTVFRTWGFNDK 62 (387)
T ss_dssp -CCCEEETTEEE-ETTEECCEEEEECT----T--G----GGSC-H----HHH-----HHHHHHHHHTTCCEEEEECCCEE
T ss_pred CcCEEEECCEEE-ECCEEEEEEEEccC----c--C----CCCC-H----HHH-----HHHHHHHHhCCCCEEEeCcccCC
Confidence 578888887722 13678888875520 1 1 1111 1 112 78999999999999999653321
Q ss_pred ccCCC-----------------------CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC----CCCCC
Q 019395 88 ANDPT-----------------------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH----SATRD 140 (341)
Q Consensus 88 ~~~~~-----------------------~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~----~g~~~ 140 (341)
...+. ....+.+..++.+|++++.|.++||+||+++|.......+... .+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~~~~~~~~~~~g~~~~~~~~~~~~ 142 (387)
T 4awe_A 63 NRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIVALTNNWADYGGMDVYTVNLGGKY 142 (387)
T ss_dssp ESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEEECCBSSSTTCCHHHHHHHTTCCS
T ss_pred CccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEEeecccccccCCCccccccccccc
Confidence 11000 0011223467889999999999999999999976432111000 00000
Q ss_pred CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC------------CChHHHHHHHHHHHHHHHhcCCCc
Q 019395 141 GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG------------VALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 141 ~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~------------~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
...++. +..++.+.+.++.+++|||++|.|++|+|.|||.... ...+.+..++++++++||+.||++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~Dp~~ 222 (387)
T 4awe_A 143 HDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIEEMSAYVKSLDGNH 222 (387)
T ss_dssp TTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSCCHHHHHHHHHHHHHHHHHHCSSS
T ss_pred ccccccCHHHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCccccccccccccchHHHHHHHHHHHHHHHHhCCCC
Confidence 111222 6778899999999999999999999999999998521 245688999999999999999999
Q ss_pred eEEEeC-CCCCC-Chh-----------hhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC
Q 019395 208 YVIMSN-RLGPA-DHK-----------ELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 208 ~v~~~~-~~~~~-~~~-----------~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
+|.++. ++... ... ..........-.++++|.|..... .. ...... .. .......+..
T Consensus 223 lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~----~~-~~~~~~---~~-~~~~~~~~~~ 293 (387)
T 4awe_A 223 LVTWGGEGGFNRGEDEEDGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWS----KS-IEWSNQ---WI-HDHAASGRAA 293 (387)
T ss_dssp EEECCCCCCCBCCC--CCTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHT----CC-HHHHHH---HH-HHHHHHHHHH
T ss_pred cEEEcccccccCCCccccccccccccccchhcccCCccceeeecccccccc----hh-hhhhHH---HH-HHHHHHHHhc
Confidence 999874 22110 000 000001123346899999953210 11 111111 11 1111222334
Q ss_pred CCceEEEeecCCCC---------CCCCC-HHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 275 GPLTFVGEWTCEWN---------VKDAS-KQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 275 ~~pv~vGE~g~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
++|++++|||.... ..... ...+..+... ......+|+++|+|+...
T Consensus 294 ~kp~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~G~~~W~~~~~~ 350 (387)
T 4awe_A 294 NKPVVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQKI---AIQEKLAGDMYWQFGYGG 350 (387)
T ss_dssp TCCEEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHHH---HHHHTCSEEEESCEECSC
T ss_pred CCCeeeccccccccCCCccchhhhhHHHHHHHHHHHHHH---HhCCCCeEEEEEEEcCCC
Confidence 67899999997532 01111 1222333322 233467899999998654
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.4e-21 Score=177.30 Aligned_cols=241 Identities=16% Similarity=0.146 Sum_probs=161.8
Q ss_pred HHHHHHHHhhccCH-----HHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC-
Q 019395 52 PQVLQDHWDSYITD-----EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA- 125 (341)
Q Consensus 52 ~~~~~~~~~~~~~e-----~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~- 125 (341)
...+++||.+|+++ ++++.||++|+|+|||++ | .+|.++ ...++++++++++|+++||+|+||+|.
T Consensus 12 ~~~~e~~g~~~~~~~G~~~d~~~ilk~~G~N~VRi~~--w--~~P~~g----~~~~~~~~~~~~~A~~~GlkV~ld~Hys 83 (332)
T 1hjs_A 12 VVVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRV--W--VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYS 83 (332)
T ss_dssp HHHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--C--SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCEEECCCCCcccHHHHHHHCCCCEEEEee--e--eCCCCC----cCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 35688999999987 899999999999999987 2 455432 125899999999999999999999997
Q ss_pred ----CCCCCCCCCCCCCCCCccCCc---hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC-------CCChHHHH
Q 019395 126 ----APGSQNGNEHSATRDGFQEWG---DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-------GVALDTLK 190 (341)
Q Consensus 126 ----~~g~~~~~~~~g~~~~~~~w~---~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~-------~~~~~~~~ 190 (341)
.|+.|+. ...|. +...+...++.+.++++++... .+..+.+.||+... ....+.+.
T Consensus 84 d~WadPg~Q~~---------p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~ 154 (332)
T 1hjs_A 84 DTWADPAHQTM---------PAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIA 154 (332)
T ss_dssp SSCCBTTBCBC---------CTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHH
T ss_pred CCcCCccccCC---------ccccccchHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHH
Confidence 3666552 23353 3344444555555555554321 23337788998741 12567899
Q ss_pred HHHHHHHHHHHhcC--CCceEEEeCCCCCCC--hhhhhhcc------CCCCcEEEEeeecCCCCccccCccchhhhHHHH
Q 019395 191 SYYKAGYDAVRKYT--STAYVIMSNRLGPAD--HKELLSFA------SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN 260 (341)
Q Consensus 191 ~~~~~~~~aIR~~~--p~~~v~~~~~~~~~~--~~~~~~~~------~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~ 260 (341)
+++++++++||+++ |+..|+++...+... ...+++.. ....-.|+.+|+|+.|... .+ ++.+.
T Consensus 155 ~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~---~~----~~~l~ 227 (332)
T 1hjs_A 155 RLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---AT----LSALK 227 (332)
T ss_dssp HHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCC---CC----HHHHH
Confidence 99999999999999 998888884332111 12222211 1126789999988765321 11 22222
Q ss_pred hhhhhhhhhhhccCCCceEEEeecCCCCCC-------------CCCHHHHHHHHHHHHHHHccC--CCcEEEecc
Q 019395 261 NQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------------DASKQDYQRFANAQLDVYGRA--TFGWAYWAH 320 (341)
Q Consensus 261 ~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~--~~Gw~~W~~ 320 (341)
..+..+.++.++||+|.|+|+.+..+ ..+.+...+|+++.+++..+. +.|.|+|..
T Consensus 228 ----~~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~~~~~G~fyWep 298 (332)
T 1hjs_A 228 ----SSLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWEP 298 (332)
T ss_dssp ----HHHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred ----HHHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEcc
Confidence 23344455557899999999876321 134667788999888887763 789999973
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.87 E-value=8.1e-22 Score=187.14 Aligned_cols=304 Identities=17% Similarity=0.186 Sum_probs=187.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+... .. ........+.|. +||+.+ ++|++.|+++|+|++|++|.|
T Consensus 11 G~atsa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~si~W 80 (431)
T 1ug6_A 11 GVATSAYQIEGATQEDGRGPSIWDAFAQR-PG---AIRDGSTGEPAC----DHYRRY--EEDIALMQSLGVRAYRFSVAW 80 (431)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTS-TT---SSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH
T ss_pred eeeCchHhhcCCcCCCCCCCeEEEEeecC-CC---cccCCCCCcccc----cchhhh--HHHHHHHHHcCCCEEEcccCH
Confidence 568999999 99854 789999864321 00 111222233455 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+++++++++.++++|+.|.++||.+||+|||+.-++...+. ..|. +..++.|.++++.+++||
T Consensus 81 ~R-i~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~l~~~-------ggw~~~~~~~~F~~ya~~~~~~~ 152 (431)
T 1ug6_A 81 PR-ILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEER-------GGWRSRETAFAFAEYAEAVARAL 152 (431)
T ss_dssp HH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTT-------TGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HH-cccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcchhhc-------CCCCChHHHHHHHHHHHHHHHHh
Confidence 64 44554357889999999999999999999999999987543221111 1365 788999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEEe--CCCC-CCCh-
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIMS--NRLG-PADH- 220 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~~--~~~~-~~~~- 220 (341)
++. |..|.++|||.. |+.. . ..+......+++++|+ +|+..|.+. ..+. ..+.
T Consensus 153 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~-~~~~~iG~~~~~~~~~P~D~~ 229 (431)
T 1ug6_A 153 ADR--VPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRA-AGARRVGIVLNFAPAYGEDPE 229 (431)
T ss_dssp TTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEECCEECSCHH
T ss_pred cCC--CceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEEecCCCCChHHHH
Confidence 995 556889999974 1211 1 1223334677889999 887554432 1110 0110
Q ss_pred -----hh-----hhh------cc-------------------CCCCcEEEEeeecCCCCcccc--------------Ccc
Q 019395 221 -----KE-----LLS------FA-------------------SGLSRVVIDVHYYNLFSNNFN--------------GLN 251 (341)
Q Consensus 221 -----~~-----~~~------~~-------------------~~~~~~v~~~H~Y~~~~~~~~--------------~~~ 251 (341)
.. +++ ++ .......+.+++|.+...... ...
T Consensus 230 aa~~~~~~~~~~f~dp~~~G~YP~~~~~~~~~~p~~~~d~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~t~ 309 (431)
T 1ug6_A 230 AVDVADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATA 309 (431)
T ss_dssp HHHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCCCTTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCT
T ss_pred HHHHHHHHHHHhhhHHHhCCCCCHHHHHhcccCCCCHHHHHHhccCCCEEEEeccccceeccCCCCCccccCCCCCCcCC
Confidence 00 000 00 012347888998865211000 000
Q ss_pred chhh--hHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC----C-----CCHHHHHHHHHHHHHHHcc--CCCcEEEe
Q 019395 252 VQQN--IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK----D-----ASKQDYQRFANAQLDVYGR--ATFGWAYW 318 (341)
Q Consensus 252 ~~~~--~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~----~-----~~~~~~~~~~~~~~~~~~~--~~~Gw~~W 318 (341)
..+. ..-+. ..+..+.+..+.|++|+|-|++.... + ...+.++++++....+.++ ...|++.|
T Consensus 310 ~gW~i~P~gl~----~~L~~~~~rY~~Pi~ITENG~~~~d~~~~~g~v~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~W 385 (431)
T 1ug6_A 310 MGWEVYPEGLY----HLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVW 385 (431)
T ss_dssp TCCBCCHHHHH----HHHHHHHHHCSSCEEEEEECCCCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CCCccChHHHH----HHHHHHHHHhCCCEEEEeccCCcCCCcCCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 0010 11111 12223333344489999999865321 1 1123455666666666665 45799999
Q ss_pred ccccCCCCCChHHHHHCCCc
Q 019395 319 AHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 319 ~~k~~~~~W~~~~~~~~g~~ 338 (341)
++-. +-+|.......-|++
T Consensus 386 sl~D-n~eW~~gy~~RfGl~ 404 (431)
T 1ug6_A 386 SLMD-NFEWAFGYTRRFGLY 404 (431)
T ss_dssp CSBC-CCCGGGGGGSCCCSE
T ss_pred cCcc-ccccccCCCCCccEE
Confidence 9863 345766555555654
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-22 Score=189.90 Aligned_cols=297 Identities=14% Similarity=0.158 Sum_probs=181.4
Q ss_pred ceeeeccCC-CCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccccc
Q 019395 9 TRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWI 87 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~ 87 (341)
|..||++|. |+ +.||+++.+... ....+ ..+.|. +||+.+ ++|++.|+++|+|++|++|.|..
T Consensus 12 G~atsa~Q~EGa---kg~s~wD~~~~~-~~~~~------~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W~r 75 (423)
T 1vff_A 12 GTATSSHQIEGN---NRWNDWWYYEQI-GKLPY------RSGKAC----NHWELY--RDDIQLMTSLGYNAYRFSIEWSR 75 (423)
T ss_dssp EEECCSTTTSSC---CTTBHHHHHHHT-TSSCC------SCCCTT----CHHHHH--HHHHHHHHHHTCCEEEEECCHHH
T ss_pred EEeCchhhcCCC---CCCcceeeeccc-CCCcC------CCcccc----cchhcc--HHHHHHHHHcCCCEEEeecCHHH
Confidence 568999999 77 788888753211 00000 233444 788888 99999999999999999999864
Q ss_pred ccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCC
Q 019395 88 ANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYAN 166 (341)
Q Consensus 88 ~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~ 166 (341)
+.|.+ +.+++++++.++++|+.|.++||.++|+||++..++...+. ..|. +..++.+.++++.+++||++
T Consensus 76 -i~P~~-g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~-------ggw~~~~~~~~f~~ya~~~~~r~gd 146 (423)
T 1vff_A 76 -LFPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKK-------GGFLREENLKHWEKYIEKVAELLEK 146 (423)
T ss_dssp -HCSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHT-------TGGGSGGGHHHHHHHHHHHHHHTTT
T ss_pred -hCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEccCCcccHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 45555 68889999999999999999999999999987543221111 1266 78999999999999999999
Q ss_pred CCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEEeCCC---CCCChh--
Q 019395 167 RPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIMSNRL---GPADHK-- 221 (341)
Q Consensus 167 ~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~~~~~---~~~~~~-- 221 (341)
|..|+++|||.. ++.. . ..+......+++++|+ +.+.-+++...+ .+.+..
T Consensus 147 ---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~ll~Aha~Av~~~r~-~~~iG~~~~~~~~~P~~~~~~d~ 222 (423)
T 1vff_A 147 ---VKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKAFKVAANLLKAHAIAYELLHG-KFKVGIVKNIPIILPASDKERDR 222 (423)
T ss_dssp ---CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECCEEEESSSSHHHH
T ss_pred ---CceEEEecCcchhhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCceEEEEeCCceecCCCCHHHH
Confidence 667999999973 1111 1 1122233456777888 544444443321 011111
Q ss_pred -------h-----hhhc------c--------CCCCcEEEEeeecCCCCccc------------------cCccchhhhH
Q 019395 222 -------E-----LLSF------A--------SGLSRVVIDVHYYNLFSNNF------------------NGLNVQQNID 257 (341)
Q Consensus 222 -------~-----~~~~------~--------~~~~~~v~~~H~Y~~~~~~~------------------~~~~~~~~~~ 257 (341)
. +++. + .......+.+++|.+..... ......+.+.
T Consensus 223 ~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~i~~~~DfiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~ 302 (423)
T 1vff_A 223 KAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIPQSDADFIGVNYYTASEVRHTWNPLKFFFEVKLADISERKTQMGWSVY 302 (423)
T ss_dssp HHHHHHHHHHTHHHHHHHHHCEEECSSCEEECCCCCCSCEEEECCCEEEEEECSCGGGTTEEEEECCCSSSCCTTCCCCC
T ss_pred HHHHHHHHHHHHHHhhHhhccccchhcCccHhhcCCCCEEEEccccceeeeccCCCCCccccccCCCCCCCCCCCCCccC
Confidence 1 1111 0 02345778889886521100 0000000000
Q ss_pred HHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHC
Q 019395 258 YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIEN 335 (341)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~ 335 (341)
- ..+...+..+ +..+.||+|+|.|++...+....+.+++++.+..++.++ ...|++.|++-. +-+|.......-
T Consensus 303 P--~gl~~~L~~~-~rY~~Pi~ITENG~~~~dD~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~D-n~eW~~gy~~Rf 378 (423)
T 1vff_A 303 P--KGIYMALKKA-SRYGRPLYITENGIATLDDEWRVEFIIQHLQYVHKAIEDGLDVRGYFYWSFMD-NYEWKEGFGPRF 378 (423)
T ss_dssp T--HHHHHHHHHH-GGGCSCEEEEECCCCCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGTTCCCC
T ss_pred H--HHHHHHHHHH-HHcCCCEEEEeCCCCCCccHHHHHHHHHHHHHHHHHHHcCCCEEEEEecCCCc-ccccccCCCCCC
Confidence 0 0111223344 444558999999986532111223345556666666665 347999999863 345665444445
Q ss_pred CCc
Q 019395 336 GYI 338 (341)
Q Consensus 336 g~~ 338 (341)
|++
T Consensus 379 Gl~ 381 (423)
T 1vff_A 379 GLV 381 (423)
T ss_dssp CSE
T ss_pred cEE
Confidence 554
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=185.40 Aligned_cols=183 Identities=17% Similarity=0.220 Sum_probs=133.6
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+... .. ........+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 13 G~Ataa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W 82 (453)
T 3ahx_A 13 GTATAAYQIEGAYKEDEKGESIWDRFSHI-PG---NVAKMHNGDIAC----DHYHRY--KEDVQLLKSLGIKSYRFSIAW 82 (453)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eEeccHHhhCCCcCCCCCCCEeeEeeccc-CC---cccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEecccCH
Confidence 568999999 99854 789998753311 00 111222334455 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
. .+.|...+.+++++++.++++|+.|.++||.++|+||++..++...+. ..|. +...+.|.++++.+++||
T Consensus 83 s-ri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~d~P~~l~~~-------ggw~~r~~~~~f~~ya~~~~~~~ 154 (453)
T 3ahx_A 83 P-RIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQKLQDI-------GGWANPQVADYYVDYANLLFREF 154 (453)
T ss_dssp H-HHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTT-------TGGGSHHHHHHHHHHHHHHHHHH
T ss_pred H-HhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHhHhhC-------CCCCCchHHHHHHHHHHHHHHHh
Confidence 6 455553357889999999999999999999999999987544322111 1366 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
+++ |..|.++|||.. |+.. . ..+......+++++|+.+|+..|-+
T Consensus 155 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 219 (453)
T 3ahx_A 155 GDR--VKTWITHNEPWVASYLGYALGVHAPGIKDMKMALLAAHNILLSHFKAVKAYRELEQDGQIGI 219 (453)
T ss_dssp TTT--CCEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCc--cceEEEccCcchhhccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 986 666889999974 2211 1 1222334577788999988765444
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=184.02 Aligned_cols=184 Identities=17% Similarity=0.261 Sum_probs=134.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+... .. .....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 12 G~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Yh~y--~eDi~lm~~~G~~~~R~si~W 81 (447)
T 1e4i_A 12 GTATAAYQIEGAYQEDGRGLSIWDTFAHT-PG---KVFNGDNGNVAC----DSYHRY--EEDIRLMKELGIRTYRFSVSW 81 (447)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---TSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeeCcHHhhCCCcCCCCCcCceeeEcccC-CC---cccCCCCCcccc----chhhcc--HHHHHHHHHcCCCeEEecCcH
Confidence 568999999 99854 789998854311 00 112222334455 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|...+.+++++++.++++|+.|.++||.++|+|||+..++...+. ..|. +..++.|.++++.+++||
T Consensus 82 ~R-i~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~l~~~-------ggw~~r~~~~~F~~ya~~~~~~~ 153 (447)
T 1e4i_A 82 PR-IFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDA-------GGWGNRRTIQAFVQFAETMFREF 153 (447)
T ss_dssp HH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHT-------TTTSSTHHHHHHHHHHHHHHHHT
T ss_pred HH-hccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHhc-------CCCCCchhHHHHHHHHHHHHHHh
Confidence 64 45553457889999999999999999999999999987544321111 1265 788999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+++ |..|.++|||.. |+.. . ..+......+++++|+..|+..|.+.
T Consensus 154 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~ 219 (447)
T 1e4i_A 154 HGK--IQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIA 219 (447)
T ss_dssp BTT--BCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCc--ceeEEEecCccccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 996 667899999974 1211 1 12233346777889999988665553
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-20 Score=172.99 Aligned_cols=232 Identities=18% Similarity=0.279 Sum_probs=159.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC--CCCCcccc--hHHHHHHHHHHHHHcCCeEEEecCCC-----CCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT--PPKPFVGG--SSKVLDNAFDWAEKYGVKVIVDLHAA-----PGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~~~~~~~--~l~~ld~~i~~a~~~gi~vildlh~~-----~g~~~~~~~ 135 (341)
+++++.||++|+|+|||++ | .+|. .+.+|.++ .++++.+++++|+++||+|+||+|-. |+.|+.
T Consensus 51 ~d~~~ilk~~G~N~VRlrv--w--v~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~--- 123 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRI--W--NDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKA--- 123 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEE--C--SCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCC---
T ss_pred chHHHHHHHCCCCEEEEee--e--cCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccC---
Confidence 6789999999999999988 3 3332 33455433 48999999999999999999999963 444441
Q ss_pred CCCCCCccCCc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 136 SATRDGFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 136 ~g~~~~~~~w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
+..|. +...+.+.++.+.++++++... .+-.+++.||++.. ....+.+.+++.+++++||+++|+.
T Consensus 124 ------P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~ 197 (399)
T 1ur4_A 124 ------PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNI 197 (399)
T ss_dssp ------CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------ccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCC
Confidence 22365 3455566677777777776654 34568999999862 2346789999999999999999999
Q ss_pred eEEEeCCCCCCC--hhhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEee
Q 019395 208 YVIMSNRLGPAD--HKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 283 (341)
Q Consensus 208 ~v~~~~~~~~~~--~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~ 283 (341)
+|+++...+... ...+.+.. ...+-.|+.+|+|+.|.. .++.+.. .+..+.++.++||+|.|+
T Consensus 198 ~V~ih~~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~---------~l~~l~~----~l~~l~~rygKpV~v~Et 264 (399)
T 1ur4_A 198 LVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG---------TLKNLTS----VLTSVADTYGKKVMVAET 264 (399)
T ss_dssp EEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC---------CHHHHHH----HHHHHHHHHCCEEEEEEE
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHcCCCcCeEeEecCccchh---------hHHHHHH----HHHHHHHHhCCcEEEEEe
Confidence 998884333211 22222211 234678999998865431 1222222 233344445788999999
Q ss_pred cCCCCCC------------------CCCHHHHHHHHHHHHHHHccC---CCcEEEec--ccc
Q 019395 284 TCEWNVK------------------DASKQDYQRFANAQLDVYGRA---TFGWAYWA--HKC 322 (341)
Q Consensus 284 g~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~---~~Gw~~W~--~k~ 322 (341)
|+.+... ..+.+...+|+++.+++..+. +.|.|+|. |-+
T Consensus 265 G~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~l~~l~~~v~~~~~~g~GvfyWep~w~~ 326 (399)
T 1ur4_A 265 SYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIP 326 (399)
T ss_dssp CCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCC
T ss_pred cCCccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhccCceEEEEEEccceec
Confidence 9876311 124577889999998887764 68999997 554
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.85 E-value=7.2e-21 Score=181.38 Aligned_cols=184 Identities=16% Similarity=0.212 Sum_probs=134.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+... .. ........+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 12 G~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W 81 (449)
T 1qox_A 12 GVATAAYQIEGAYNEDGRGMSIWDTFAHT-PG---KVKNGDNGNVAC----DSYHRV--EEDVQLLKDLGVKVYRFSISW 81 (449)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHS-TT---TSGGGCCTTTTT----CTTSCH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeeCcHHHhCCCcCCCCCCCEeeEEeccc-CC---cccCCCCCcccc----chhhhh--HHHHHHHHhcCCCeEEecCcH
Confidence 568999999 99854 789998753210 00 111222233454 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|...+.+++++++.++++|+.|.++||.++|+|||+..++...+. ..|. +...+.|.++++.+++||
T Consensus 82 ~r-i~P~G~g~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~d~P~~l~~~-------ggw~~r~~~~~f~~ya~~~~~~~ 153 (449)
T 1qox_A 82 PR-VLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQ-------GGWGSRITIDAFAEYAELMFKEL 153 (449)
T ss_dssp HH-HSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTT-------TGGGSTHHHHHHHHHHHHHHHHH
T ss_pred HH-hCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEeCCCcccHHHHhc-------CCCCCchHHHHHHHHHHHHHHHh
Confidence 64 45553457888999999999999999999999999988544322111 1266 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+++ |..|.++|||.. |+.. . ..+......+++++|+..|+..|.+.
T Consensus 154 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi~ 219 (449)
T 1qox_A 154 GGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIA 219 (449)
T ss_dssp TTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCC--CceEEEccCCcceeccccccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 997 666889999974 1211 1 12233346777889999988665553
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.2e-21 Score=181.90 Aligned_cols=182 Identities=18% Similarity=0.219 Sum_probs=132.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|++ +.||+++.+... .. .....-..+.|. +||+.+ ++|++.|+++|+|++|++|+|
T Consensus 21 G~Ataa~QiEGa~~edGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW 90 (454)
T 2o9p_A 21 GTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PG---KVIGGDCGDVAC----DHFHHF--KEDVQLMKQLGFLHYRFSVAW 90 (454)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHTTTCCEEEEECCH
T ss_pred eeeCchhhcCCCcCCCCCcCchheeeccC-CC---cccCCCCCcccc----chHHHH--HHHHHHHHhcCCceEEecccH
Confidence 568999999 99854 789999854321 00 112222334455 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
. .+.|.+ +.+++++++.++++|+.|.++||.++|+||++.-++...+. ..|. +..++.|.++++.+++||
T Consensus 91 s-Ri~P~~-g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~-------ggw~~r~~~~~F~~ya~~~~~~~ 161 (454)
T 2o9p_A 91 P-RIMPAA-GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQWIEDE-------GGWTQRETIQHFKTYASVIMDRF 161 (454)
T ss_dssp H-HHCSST-TCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHT-------TGGGSTHHHHHHHHHHHHHHHHS
T ss_pred H-hhCCCC-CCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCccHHHHhc-------CCCCCcchHHHHHHHHHHHHHHh
Confidence 6 445554 57888999999999999999999999999987543321111 1265 788999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
+++ |..|.++|||.. |+.. . ..+......+++++|+.+|+..|-+
T Consensus 162 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 226 (454)
T 2o9p_A 162 GER--INWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGIASNLHKEKGLTGKIGI 226 (454)
T ss_dssp SSS--CSEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCc--ceeEEEecCcceecccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 986 666889999974 1211 1 1222334567888999988755444
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.8e-21 Score=182.85 Aligned_cols=183 Identities=17% Similarity=0.205 Sum_probs=134.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+... +-...++...+.|. +||+.| ++|++.||++|+|++|++|+|
T Consensus 20 G~Ataa~QiEGa~~~dGkg~SiwD~~~~~----~~~i~~~~~~~~a~----D~Yhry--~eDi~Lm~elG~~~yRfSIsW 89 (458)
T 3ta9_A 20 GAATSSYQIEGAFNEDGKGESIWDRFSHT----PGKIENGDTGDIAC----DHYHLY--REDIELMKEIGIRSYRFSTSW 89 (458)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS----TTSSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEEchhhhhCCCcCCCCCccchhhhhhcc----CCcccCCCCCcccc----chHHhH--HHHHHHHHHcCCCEEEecCcH
Confidence 578999999 99954 789998854321 00111112234455 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+.+++++++.++++|+.|.++||.++|+|+|+..++...+.+| |. ++.++.|+++.+.+++||
T Consensus 90 sR-I~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~dlP~~L~~~GG-------W~nr~~v~~F~~YA~~~f~~f 161 (458)
T 3ta9_A 90 PR-ILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQALQDKGG-------WTNRDTAKYFAEYARLMFEEF 161 (458)
T ss_dssp HH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTG-------GGSHHHHHHHHHHHHHHHHHT
T ss_pred HH-hCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHhHHhcCC-------CCCHHHHHHHHHHHHHHHHHh
Confidence 64 4555545788899999999999999999999999999876554333222 77 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-ChH-------HHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~~-------~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
+++... |-++|||+. |+. +.. .+......+++++|+..|+..|.+
T Consensus 162 gdrVk~--W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~IG~ 226 (458)
T 3ta9_A 162 NGLVDL--WVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEIGI 226 (458)
T ss_dssp TTTCCE--EEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred cCcCCE--EEEecCcchhhcccccccccCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 997555 669999973 111 111 122334466788899888755544
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.8e-21 Score=180.36 Aligned_cols=183 Identities=17% Similarity=0.249 Sum_probs=133.7
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++..... +-........+.|. +||+.| ++|++.|+++|+|++|++|.|
T Consensus 12 G~Ataa~QiEGa~~~dGkg~siwD~~~~~----~~~~~~~~~~~~a~----D~Yhry--~eDi~l~~~lG~~~~R~si~W 81 (444)
T 4hz8_A 12 GAATSSYQIEGAWNEDGKGESIWDRFTRI----PGKIKNGDSGDVAC----DHYHRY--EQDLDLMRQLGLKTYRFSIAW 81 (444)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTS----TTSSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEEchHHhhCCCcCCCCCcCchhhhhhcC----CCcccCCCCCcccc----chhhhH--HHHHHHHHhcCCCEEEEeccH
Confidence 578999999 99854 789999864321 00111222234455 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.++++++.++.++++|+.|.++||.++|+|||+..++...+.+ .|. ++.++.|.++++.+++||
T Consensus 82 ~R-i~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~dlP~~L~~~G-------GW~nr~~v~~F~~Ya~~~~~~~ 153 (444)
T 4hz8_A 82 AR-IQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQWVEDEG-------GWLSRESASRFAEYTHALVAAL 153 (444)
T ss_dssp HH-HSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTT-------GGGSTHHHHHHHHHHHHHHHHH
T ss_pred HH-cCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHHhhCc-------CCCChHHHHHHHHHHHHHHHHh
Confidence 64 455544577888999999999999999999999999986554322222 276 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCC-ceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKAGYDAVRKYTST-AYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~-~~v~~ 211 (341)
+++.. .|.++|||+. ++. +. ..+......+++++|+..|+ ..|-+
T Consensus 154 gdrVk--~W~T~NEp~~~~~~gy~~g~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~iG~ 219 (444)
T 4hz8_A 154 GDQIP--LWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGI 219 (444)
T ss_dssp GGGCS--EEEEEECHHHHHHHHHTSCSSTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CccCC--eEEEccCcchhhhccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccCeEEE
Confidence 99644 4779999973 111 11 12333445677889999887 44433
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.84 E-value=9.7e-21 Score=182.02 Aligned_cols=183 Identities=20% Similarity=0.255 Sum_probs=132.3
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+... .. ...+.-..+.|. +||+.| ++|++.||++|+|++|++|+|
T Consensus 25 G~Atsa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Yh~y--~eDi~lm~~lG~~~yRfsIsW 94 (479)
T 1gnx_A 25 GSATASYQIEGAAAEDGRTPSIWDTYART-PG---RVRNGDTGDVAT----DHYHRW--REDVALMAELGLGAYRFSLAW 94 (479)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred EEeccHHHhCCCcCCCCCcCeeeEEeccC-CC---cccCCCCCcccc----chhhcC--HHHHHHHHHcCCCEEEecccH
Confidence 568899999 99855 789998854321 00 111122233454 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..+ .|.+.++.++.+++.++++|+.|.++||.+||+|||+..++...+. ..|. +..++.|.++++.+++||
T Consensus 95 sRI-~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~-------GGw~~r~~v~~F~~ya~~~~~~~ 166 (479)
T 1gnx_A 95 PRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENA-------GGWPERATAERFAEYAAIAADAL 166 (479)
T ss_dssp HHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHT-------TCTTSTHHHHHHHHHHHHHHHHH
T ss_pred HHh-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcccHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHh
Confidence 654 4544346778899999999999999999999999988554321111 1265 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcC-CCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA-L-------DTLKSYYKAGYDAVRKYT-STAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~-p~~~v~~ 211 (341)
++. |..|.++|||.. ++.. . ..+......+++++|+.+ |+..|-+
T Consensus 167 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~lllAha~Av~~~r~~~~~~~~IGi 232 (479)
T 1gnx_A 167 GDR--VKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSV 232 (479)
T ss_dssp TTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCc--ceeEEEecCcchhhhhhhccCcCCCCccChHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeEEE
Confidence 995 556889999974 1211 1 123333457788899988 7754443
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.4e-21 Score=182.46 Aligned_cols=190 Identities=17% Similarity=0.197 Sum_probs=130.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcC--cc--hHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFG--PD--KAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g--~~--~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
|..||++|. |+|.+ +.||+++.+..........+ ..+ .. -....-.+||+.+ ++|++.|+++|+|++|+
T Consensus 15 G~Ataa~Q~EGa~~edGkg~siwD~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~D~Y~~~--~eDi~lm~~~G~~~~R~ 90 (479)
T 2xhy_A 15 GGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREI--TKEVLPGKYYPNHEAVDFYGHY--KEDIKLFAEMGFKCFRT 90 (479)
T ss_dssp CCBCCHHHHCCCTTSTTCCCBTTTTBCCCBTTBCCCB--CSSCCTTSCCHHHHTTCHHHHH--HHHHHHHHHHTCSEEEE
T ss_pred eEeChhhhcCCCcCCCCCcCcceeecccCCCCccccC--CccccccccCCCcccccchhhh--HHHHHHHHHcCCCEEEe
Confidence 568899999 99855 78999986432110000000 000 00 0112223888888 99999999999999999
Q ss_pred CcccccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHH
Q 019395 82 PVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDF 159 (341)
Q Consensus 82 pi~~~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~ 159 (341)
+|+|..++ |.. .+++++..++.++++|+.|.++||.++|+|||+..++...+. ...|. +..++.|+++++.
T Consensus 91 sisW~Ri~-P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d~P~~l~~~------~ggw~~~~~~~~F~~ya~~ 163 (479)
T 2xhy_A 91 SIAWTRIF-PKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQ------YGSWTNRKVVDFFVRFAEV 163 (479)
T ss_dssp ECCHHHHS-SSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------SCGGGSTHHHHHHHHHHHH
T ss_pred eCCHHHhC-CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCHHHHhh------cCCCCCHHHHHHHHHHHHH
Confidence 99986544 443 356778899999999999999999999999997543321110 12266 7899999999999
Q ss_pred HHHHhCCCCceeEEEeecCCCCCC-------------C-Ch-------------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 160 LAARYANRPSLAAIELINEPLAPG-------------V-AL-------------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 160 la~~y~~~~~v~~~el~NEP~~~~-------------~-~~-------------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
+++||++. |..|.++|||.... . .+ ..+......+++++|+.+|+..|.+
T Consensus 164 ~~~~~gd~--V~~w~t~NEp~~~~~~~~gy~~~~~~G~~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IG~ 240 (479)
T 2xhy_A 164 VFERYKHK--VKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGC 240 (479)
T ss_dssp HHHHTTTT--CCEEEEETTTTGGGSTTSTTHHHHHHSCCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhCCC--CCcEEEecCcchhhhccccccccccccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 99999995 44688999998521 0 00 0111223467788999998866544
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=176.27 Aligned_cols=178 Identities=16% Similarity=0.219 Sum_probs=132.3
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+..+.+ .-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 12 G~Atsa~QiEGa~~edGkg~siwD~~~~~~~--------~~~~~~a~----D~Yh~y--~eDi~lm~~~G~~~~R~sisW 77 (468)
T 1pbg_A 12 GGATAAYQAEGATHTDGKGPVAWDKYLEDNY--------WYTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW 77 (468)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHTTC--------SCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeeCchhccCCCcCCCCCccchhhhhhcCCc--------CCCccccc----cccccC--HHHHHHHHHhCCCEEEeccCH
Confidence 568999999 99855 78999986432111 11233454 788888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+.++++.++.++++|+.|.++||.++|+|+|+.-++...+. ..|. +...+.|.++++.+++||
T Consensus 78 sR-i~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~-------ggw~~r~~~~~F~~ya~~~~~~~ 149 (468)
T 1pbg_A 78 SR-IFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-------GDFLNRENIEHFIDYAAFCFEEF 149 (468)
T ss_dssp HH-HSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHT-------TGGGSTHHHHHHHHHHHHHHHHC
T ss_pred hh-hccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCccCHHHHhc-------CCCCChHHHHHHHHHHHHHHHHh
Confidence 64 44554457888999999999999999999999999988554322111 1266 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCCC--hH-------HHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGVA--LD-------TLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~~--~~-------~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
++ |..|.++|||.. |+.. .. .+......+++++|+..|+..|-+
T Consensus 150 gd---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 214 (468)
T 1pbg_A 150 PE---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGV 214 (468)
T ss_dssp TT---CCEEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CC---CCEEEEecCchhhhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 98 677999999973 1211 11 222334577888999988755533
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=173.72 Aligned_cols=311 Identities=14% Similarity=0.180 Sum_probs=189.4
Q ss_pred ceeeeccCC-CCcc-cCCcccccccccCCcchhh----hhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcC
Q 019395 9 TRLTADYGS-SSWD-DSDPSVFKLNIVSTLRGEY----QITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIP 82 (341)
Q Consensus 9 ~~~~~~~~~-~~~~-~~~p~~f~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlp 82 (341)
|..||++|. |+|. .+.||+++.+... +- .....-..+.+. +||+.| ++|++.|+++|+|++|++
T Consensus 11 G~Atsa~Q~EGa~~~gkg~SiwD~~~~~----~~~~~~~~~~~~~~~~a~----d~Y~~y--~eDi~l~~~lG~~~~R~s 80 (473)
T 3apg_A 11 GYSWSGFQFEMGLPGSEVESDWWVWVHD----KENIASGLVSGDLPENGP----AYWHLY--KQDHDIAEKLGMDCIRGG 80 (473)
T ss_dssp EEECCHHHHSCSSTTCCCCCHHHHHHHC----HHHHHTTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEE
T ss_pred EEecchhhhcCCcCCCCcCeeeEEcccC----CCccccccccCCCCcccc----cchhHH--HHHHHHHHHcCCCEEEEe
Confidence 568899999 8884 3688888754211 11 011111234444 788888 999999999999999999
Q ss_pred cccccccCCCCCC--Ccc---------------------------cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCC
Q 019395 83 VGWWIANDPTPPK--PFV---------------------------GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 133 (341)
Q Consensus 83 i~~~~~~~~~~~~--~~~---------------------------~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~ 133 (341)
|.|. .+.|.++. .++ +++++.++++|+.++++||.|||+|+|+.-++...
T Consensus 81 i~Ws-RI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~~id~l~~~Gi~pivtL~H~~lP~wl~ 159 (473)
T 3apg_A 81 IEWA-RIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIH 159 (473)
T ss_dssp CCHH-HHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCCTTTB
T ss_pred cchh-hccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHH
Confidence 9885 45565531 566 77899999999999999999999999875544322
Q ss_pred CCC-----CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CC-----ChH-----
Q 019395 134 EHS-----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GV-----ALD----- 187 (341)
Q Consensus 134 ~~~-----g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------~~-----~~~----- 187 (341)
+.. +.......|. +...+.|.++.+.+++||++. |..|.++|||... +. +..
T Consensus 160 d~~~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a 237 (473)
T 3apg_A 160 DPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDL--VDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKA 237 (473)
T ss_dssp CHHHHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGGG--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHH
T ss_pred hCCCccccccCCccCCCCCccHHHHHHHHHHHHHHHhCCc--ceEEEEecCcchhhcccccccccCCCCCCcCHHHHHHH
Confidence 210 0001122477 788999999999999999986 6668899999730 11 011
Q ss_pred --HHHHHHHHHHHHHHhcCCCceEEE--eCCC-CCC---Chhhhhhc-------cC----CCCcEEEEeeecCCCCcccc
Q 019395 188 --TLKSYYKAGYDAVRKYTSTAYVIM--SNRL-GPA---DHKELLSF-------AS----GLSRVVIDVHYYNLFSNNFN 248 (341)
Q Consensus 188 --~~~~~~~~~~~aIR~~~p~~~v~~--~~~~-~~~---~~~~~~~~-------~~----~~~~~v~~~H~Y~~~~~~~~ 248 (341)
.+......+++++|+..+ ..|-+ ...+ -.. +....... .+ ......+.+++|....-...
T Consensus 238 ~h~lllAHa~A~~~~r~~~~-~~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~dp~~d~~~~DfiGiNyY~~~~v~~~ 316 (473)
T 3apg_A 238 KFNLIQAHIGAYDAIKEYSE-KSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAK 316 (473)
T ss_dssp HHHHHHHHHHHHHHHHTSCC-SEEEEEEECCEEEESSGGGHHHHHHHHHHHHHHHHHHHHTTCCSCEEEECCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhcCC-CcEEEEeeCCeeecCCCCCHHHHHHHHHHhhhcCceeEecCCCCeeEEcCccceEEecC
Confidence 122223567788888744 33322 2211 001 11111000 00 23356777887754210000
Q ss_pred --------C-----------------ccchhh--hHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHH
Q 019395 249 --------G-----------------LNVQQN--IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFA 301 (341)
Q Consensus 249 --------~-----------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~ 301 (341)
. ....+. ...+. ..+..+.+..+.|++|+|.|++...+....+.+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL~----~~L~~~~~rY~~Pi~ITENG~~~~~D~~Ri~yl~~hl 392 (473)
T 3apg_A 317 DGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLE----NLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHL 392 (473)
T ss_dssp SSSEEECTTSGGGSCTTSBCTTSCBBCTTSCBCCHHHHH----HHHHHHHHHHCCCEEEEECCCCCTTCSSHHHHHHHHH
T ss_pred CccccCCCCcccccccccccCCCCCcCCCCCcccHHHHH----HHHHHHHHHhCCeEEEEecCCCCCCchHHHHHHHHHH
Confidence 0 000000 01111 1222232333448999999987543344556778888
Q ss_pred HHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 302 NAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 302 ~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
.+...+.++ .-.|++.|++-. +-+|.......-|++
T Consensus 393 ~~~~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~ 430 (473)
T 3apg_A 393 KAVYNAMKEGADVRGYLHWSLTD-NYEWAQGFRMRFGLV 430 (473)
T ss_dssp HHHHHHHTTTCCEEEEEESCSBC-CCCGGGGGGSCCCSE
T ss_pred HHHHHHHHcCCCEEEEEEecccc-cCcccccccCcCCeE
Confidence 888888876 456999999863 355766555556654
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.80 E-value=5.1e-18 Score=157.00 Aligned_cols=232 Identities=16% Similarity=0.213 Sum_probs=155.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++++.||++|+|+|||.+ | .+|.++ .+ .++++.++++.|+++||+|+||+|..+-... .+.......
T Consensus 30 ~~~~~ilk~~G~n~vRlri--~--v~P~~g-~~---d~~~~~~~~~~ak~~Gl~v~ld~hysd~wad----P~~q~~p~~ 97 (334)
T 1fob_A 30 QALETILADAGINSIRQRV--W--VNPSDG-SY---DLDYNLELAKRVKAAGMSLYLDLHLSDTWAD----PSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--C--SCCTTC-TT---CHHHHHHHHHHHHHTTCEEEEEECCSSSCCB----TTBCBCCTT
T ss_pred chHHHHHHHcCCCEEEEEE--E--ECCCCC-cc---CHHHHHHHHHHHHHCCCEEEEEeccCCCCCC----cccccCccc
Confidence 5799999999999999966 2 455543 22 4899999999999999999999998421110 011111234
Q ss_pred Cc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC-----C--CChHHHHHHHHHHHHHHHhcC--CCceEE
Q 019395 145 WG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-----G--VALDTLKSYYKAGYDAVRKYT--STAYVI 210 (341)
Q Consensus 145 w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~-----~--~~~~~~~~~~~~~~~aIR~~~--p~~~v~ 210 (341)
|. +...+.+.++.+.+++++++.. .+..+++.|||+.. + ...+.+.++..+++++||+++ |+.+|+
T Consensus 98 W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~ 177 (334)
T 1fob_A 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEE
Confidence 65 3577788888889999888753 34458899999852 1 135789999999999999999 988888
Q ss_pred EeCCCCCCCh---hhhhh----cc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEE
Q 019395 211 MSNRLGPADH---KELLS----FA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 281 (341)
Q Consensus 211 ~~~~~~~~~~---~~~~~----~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vG 281 (341)
++-..+ .+. ..+.. .. ......++.+|+|+.|... .+ ++.+. ..+..+.++.++||+|.
T Consensus 178 ~h~~~~-~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~---~~----~~~l~----~~l~~~~~rygKpv~it 245 (334)
T 1fob_A 178 IHLDDG-WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---AT----LASLK----TSLANLQSTYDKPVVVV 245 (334)
T ss_dssp EEESCT-TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHH----HHHHHHHHHHCCCEEEE
T ss_pred EEcCCc-CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCC---CC----HHHHH----HHHHHHHHHHCCCEEEE
Confidence 773221 121 11211 10 1125689999988755311 11 22222 12333444457889999
Q ss_pred eecCCCCCCC-------------CCHHHHHHHHHHHHHHHccC--CCcEEEecc
Q 019395 282 EWTCEWNVKD-------------ASKQDYQRFANAQLDVYGRA--TFGWAYWAH 320 (341)
Q Consensus 282 E~g~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--~~Gw~~W~~ 320 (341)
|+|+++..+. .+.+....|+++.++...+. +.|.++|++
T Consensus 246 EtG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~ 299 (334)
T 1fob_A 246 ETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP 299 (334)
T ss_dssp ECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred EcccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECc
Confidence 9998764221 24566788888888877653 789999985
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-19 Score=171.29 Aligned_cols=312 Identities=14% Similarity=0.166 Sum_probs=186.6
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhc--C--cchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGF--G--PDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~--g--~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
|.+||++|. |+|.+ +.||+++.+.. .+-...... | +..+. +||+.| ++|++.||++|+|+.|+
T Consensus 11 G~AtaAyQiEGa~~~~gkg~siWd~~~~----~~~~~~~~~~~gd~~~~a~----d~Yh~y--~eDi~l~~elG~~~yRf 80 (489)
T 1uwi_A 11 GWSQAGFQSEMGTPGSEDLNTDWYKWVH----DPENMAAGLVSGDLPENGP----GYWGNY--KTFHNNAQKMGLKIARL 80 (489)
T ss_dssp EEECCHHHHSCSSTTCCCCCBHHHHHHH----CHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEE
T ss_pred EEEchHHhhcCCCCCCCCCCcceeeeee----cCCcccCCCCCCCcccccc----chhhhH--HHHHHHHHHcCCCEEEE
Confidence 678999999 98854 68888875321 111111110 1 11222 578888 99999999999999999
Q ss_pred CcccccccCCCCC---------------------------CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 82 PVGWWIANDPTPP---------------------------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 82 pi~~~~~~~~~~~---------------------------~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
+|+|.+++ |.+. ++.+++++++++++|+.|.++||.++|+|||+..++...+
T Consensus 81 SIsWsRI~-P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~DlP~~L~d 159 (489)
T 1uwi_A 81 NSEWSRQF-PNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHD 159 (489)
T ss_dssp ECCHHHHC-CSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCCSCCBGGGBC
T ss_pred eCcHHHCC-CCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCcceEEeecCCccHHHHH
Confidence 99997555 3221 2456789999999999999999999999999977765433
Q ss_pred CC----CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------------CC-CChH-------
Q 019395 135 HS----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------------PG-VALD------- 187 (341)
Q Consensus 135 ~~----g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------------~~-~~~~------- 187 (341)
.. |.-.....|. ++.++.|+++.+.++++|+++... |-.+|||+. ++ .+..
T Consensus 160 ~y~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~~~~~~gy~~~~~~~~pg~~~~~~~~~a~h 237 (489)
T 1uwi_A 160 PIRVRRGDFTGPSGWLSTRTVYEFARFSAYTAWKFDDLVDE--YSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMY 237 (489)
T ss_dssp HHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHH
T ss_pred hhhhcccccccCCCcCCHHHHHHHHHHHHHHHHHhCCccCe--EEEecCchheccccccccccCCCCCcccHHHHHHHHH
Confidence 10 1001123487 899999999999999999997766 459999963 11 1111
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEE-eC----CCCCCChhh-----------hhh------cc----------CCCCcEEE
Q 019395 188 TLKSYYKAGYDAVRKYTSTAYVIM-SN----RLGPADHKE-----------LLS------FA----------SGLSRVVI 235 (341)
Q Consensus 188 ~~~~~~~~~~~aIR~~~p~~~v~~-~~----~~~~~~~~~-----------~~~------~~----------~~~~~~v~ 235 (341)
.+.....++++++|+..+..+-++ .. +....+... +++ ++ ....-..+
T Consensus 238 ~~llAha~a~~~~r~~~~~~iGi~~~~~~~~P~~~~d~~aa~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~g~~DFi 317 (489)
T 1uwi_A 238 NIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWI 317 (489)
T ss_dssp HHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEESSTTCHHHHHHHHHHHTHHHHHHHHTCEEEETTEEEECTTTTTCCSCE
T ss_pred HHHHHHHHHHHHHhcccccceeeeeccccccCCCccCHHHHHHHHhhhcccccCccccCccccccceeeecccCCccCcc
Confidence 122234456677888776533222 11 111111100 000 00 01122345
Q ss_pred EeeecCCCCc---------------c--c--------cCccchhhh--HHHHhhhhhhhhhhhccCCCceEEEeecCCCC
Q 019395 236 DVHYYNLFSN---------------N--F--------NGLNVQQNI--DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 236 ~~H~Y~~~~~---------------~--~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~ 288 (341)
.+-+|...-- . . ..+...+.+ .-+. ..+..+.+..++||+|+|-|++..
T Consensus 318 GinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~Gl~----~~L~~~~~rY~~Pi~ITENG~~~~ 393 (489)
T 1uwi_A 318 GVNYYTRTVVKRTGKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGLY----DVLTKYWNRYHLYMYVTENGIADD 393 (489)
T ss_dssp EEEEEEEEEEEEETTEEEECTTSTTSSCTTSBCTTSCBBCTTCCBCCTHHHH----HHHHHHHHHHCCCEEEEECCCCCS
T ss_pred eeccceeeeeecCCCcccCCCCcCcccccccccCCCccccCCCCeechHHHH----HHHHHHHHhhCCCEEEecCCCCCC
Confidence 5555632100 0 0 000000000 1111 122233334467899999998765
Q ss_pred CCCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 289 VKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
.+....+.+++++++...+.++ .-.|++.|++-. +-+|+-.....-|++
T Consensus 394 ~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D-nfEW~~Gy~~RfGli 444 (489)
T 1uwi_A 394 ADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLAD-NYEWASGFSMRFGLL 444 (489)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGGGGSCCCSE
T ss_pred CchHHHHHHHHHHHHHHHHHHCCCCEEEEeeccchH-hhChhhhcccccceE
Confidence 4444556778888888888876 577999999863 345554333344544
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-19 Score=172.73 Aligned_cols=312 Identities=17% Similarity=0.169 Sum_probs=186.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhh----cCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNG----FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
|..||++|. |+|.+ +.||+++.+.. +.-..... --++.+. +||+.| ++|++.||++|+|+.|+
T Consensus 11 G~AtaAyQiEGa~~~~g~~~s~wd~~~~----~~~~~~~~~~~gd~~~~a~----d~yh~y--~eDi~l~~~mG~~~yRf 80 (489)
T 4ha4_A 11 GWSQAGFQSEMGTPGSEDPNSDWYAWVH----DRENIAAGLVSGDFPENGP----GYWGNY--RKFHDAAQAMGLTAARI 80 (489)
T ss_dssp EEEECHHHHSCSSTTCCCCCBHHHHHHH----CHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEE
T ss_pred EEechHHhhcCCcCCCCCCCcceeeccc----ccCcccCCCcCCCCccccc----cHHHHH--HHHHHHHHHcCCCEEEe
Confidence 678999999 98854 67888875321 11111111 0112232 577777 99999999999999999
Q ss_pred CcccccccCCCCC----------------------------CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCC
Q 019395 82 PVGWWIANDPTPP----------------------------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 133 (341)
Q Consensus 82 pi~~~~~~~~~~~----------------------------~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~ 133 (341)
+|+|.+++ |.+. ++.+++++++++++|+.|.++||.++|+|||+..++...
T Consensus 81 SIsWsRI~-P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~DlP~~L~ 159 (489)
T 4ha4_A 81 GVEWSRIF-PRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMFSDLRSRGITFILNLYHWPLPLWLH 159 (489)
T ss_dssp ECCHHHHC-SSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTCEEEEESCSSCCBTTTB
T ss_pred eccHHhcC-cCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCeeeEeecCCCchHHHh
Confidence 99997555 4321 124678999999999999999999999999997776543
Q ss_pred CCC----CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------------CC-CCh-------
Q 019395 134 EHS----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------------PG-VAL------- 186 (341)
Q Consensus 134 ~~~----g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------------~~-~~~------- 186 (341)
+.. |.......|. ++.++.|.++.+.++++|+++... |-.+|||+. ++ .+.
T Consensus 160 d~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgdrVk~--W~T~NEp~~~~~~gy~~~~~~~~p~~~~~~~~~~~~ 237 (489)
T 4ha4_A 160 DPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVAWKLDDLVYM--YSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGRAM 237 (489)
T ss_dssp CHHHHHTTCTTSCBGGGSHHHHHHHHHHHHHHHHHHGGGCSE--EEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHH
T ss_pred hhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCccce--EEEeccchhhhcccccccccCCCccccCHHHHHHHH
Confidence 310 1001123487 899999999999999999997666 559999963 11 111
Q ss_pred HHHHHHHHHHHHHHHhcCCCceEEEe-CC----CCCCChh-----------hhhh------cc------CCCCcEEEEee
Q 019395 187 DTLKSYYKAGYDAVRKYTSTAYVIMS-NR----LGPADHK-----------ELLS------FA------SGLSRVVIDVH 238 (341)
Q Consensus 187 ~~~~~~~~~~~~aIR~~~p~~~v~~~-~~----~~~~~~~-----------~~~~------~~------~~~~~~v~~~H 238 (341)
..+.....++++++|+..+..+-++. .. ....+.. .+++ ++ .......+.+-
T Consensus 238 h~~l~Aha~a~~~~~~~~~~~iGi~~~~~~~~P~~~~d~~aa~~~~~~~~~~f~d~~~~g~~p~~~~~~lk~~~DfiGin 317 (489)
T 4ha4_A 238 KNLVQAHARAYDAVKAITKKPVGVIYANSDFTPLTDADREAAERAKFDNRWAFFDAVVRGQLGGSTRDDLKGRLDWIGVN 317 (489)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSGGGHHHHHHHHHHHTHHHHHHHHHCEETTEECTTTTTCCSCEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCceeEEeeccccccccchhHHHHHHHHHhhcccccChhhcCcCCcccchhccccccccccc
Confidence 12333344667788888776433332 11 1111100 0111 00 11222445555
Q ss_pred ecCCCC---------------cc-cc---------Cccchhhh--HHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCC
Q 019395 239 YYNLFS---------------NN-FN---------GLNVQQNI--DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 291 (341)
Q Consensus 239 ~Y~~~~---------------~~-~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~ 291 (341)
+|...- .. .. .+...+.+ .-+. ..+..+.+..++||+|+|-|++...+.
T Consensus 318 yY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~----~~L~~~~~rY~~Pi~ITENG~~~~~D~ 393 (489)
T 4ha4_A 318 YYTRQVVRARGSGYEIVPGYGHGCEPNGVSPAGRPCSDFGWEFYPEGLY----NVLKEYWDRYHLPLLVTENGIADEGDY 393 (489)
T ss_dssp EEEEEEEEEETTEEEECTTSTTSSCTTCBCTTSCBBCTTSCBCCTHHHH----HHHHHHHHHHCCCEEEEECCCCCTTCS
T ss_pred cccceeeecCCCccccCccccccccccccccCCCccCCCCceeccHHHH----HHHHHHHhhcCCCEEEecCCCCCCCCh
Confidence 552100 00 00 00000000 1111 122223333467899999998765444
Q ss_pred CCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 292 ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
...+.+++++.+...+.++ .-.|++.|++-. +-+|+-.....-|++
T Consensus 394 ~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D-nfEW~~Gy~~RfGli 441 (489)
T 4ha4_A 394 QRPYYLVSHVYQVHRALQDGVNVIGYLHWSLAD-NYEWASGFSKRFGLL 441 (489)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBC-CCCGGGGGGSCCCSE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEeecCchh-hhchhhccccccceE
Confidence 4456778888888888876 678999999863 345543333334543
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=163.71 Aligned_cols=314 Identities=14% Similarity=0.152 Sum_probs=187.1
Q ss_pred ceeeeccCC-CCccc-C-CcccccccccCCcch-hhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCcc
Q 019395 9 TRLTADYGS-SSWDD-S-DPSVFKLNIVSTLRG-EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVG 84 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~-~-~p~~f~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~ 84 (341)
|..||++|. |+..+ . .||+++.+... ... .-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+
T Consensus 10 G~Atsa~Q~EGa~~g~~~~~s~wd~~~~~-~~~~~~~~~~~~~~~~a~----d~Y~~y--~eDi~lm~~~G~~~~R~sis 82 (481)
T 1qvb_A 10 GYSSSPFQFEAGIPGSEDPNSDWWVWVHD-PENTAAGLVSGDFPENGP----GYWNLN--QNDHDLAEKLGVNTIRVGVE 82 (481)
T ss_dssp EEECCHHHHSCCSTTCCCTTBHHHHHHHC-HHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred eeecccceeecCcCCCCCCCeEEEecccC-CccccccccCCCCCcccc----chHHHH--HHHHHHHHHcCCCccEeccc
Confidence 567888888 66322 2 66666543200 000 00011111233444 888888 99999999999999999999
Q ss_pred cccccCCCCCC-----------------Ccc------------cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 85 WWIANDPTPPK-----------------PFV------------GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 85 ~~~~~~~~~~~-----------------~~~------------~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
|.. +.|.++. .++ +++++.++++|+.+.++||.|||+|+|+..++...+.
T Consensus 83 WsR-i~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~~id~l~~~Gi~p~vtL~H~~lP~~L~~~ 161 (481)
T 1qvb_A 83 WSR-IFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNP 161 (481)
T ss_dssp HHH-HCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCBTTTBCH
T ss_pred hhh-hCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhc
Confidence 854 4554431 567 7889999999999999999999999987655433221
Q ss_pred C-----CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------------CCCC-h-------H
Q 019395 136 S-----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------------PGVA-L-------D 187 (341)
Q Consensus 136 ~-----g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------------~~~~-~-------~ 187 (341)
. |.+.....|. +...+.|.++.+.+++||+++ |..|.++|||.. |+.. . .
T Consensus 162 ~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd~--V~~W~t~NEp~~~~~~gy~~~~~G~~Pg~~~~~~~~~a~h 239 (481)
T 1qvb_A 162 IMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGEL--PVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARR 239 (481)
T ss_dssp HHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTS--CSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHH
T ss_pred CCcccccccccCCCcCCchHHHHHHHHHHHHHHHhCCC--ccEEEEecccchhhcccccccccCCCCCCCCHHHHHHHHH
Confidence 1 1111223476 789999999999999999986 666889999973 1110 1 1
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEE--eCCCC---CCCh------hhh-----hhc------c--------CCCCcEEEEe
Q 019395 188 TLKSYYKAGYDAVRKYTSTAYVIM--SNRLG---PADH------KEL-----LSF------A--------SGLSRVVIDV 237 (341)
Q Consensus 188 ~~~~~~~~~~~aIR~~~p~~~v~~--~~~~~---~~~~------~~~-----~~~------~--------~~~~~~v~~~ 237 (341)
.+......+++++|+..|+ .|-+ ...+. +.+. ..+ ++. + .......+.+
T Consensus 240 ~~llAHa~A~~~~r~~~~~-~IGi~~~~~~~~P~~~d~~aa~~~~~~~~~~fld~~~~G~yp~~~~~~~~~~~~~DfiGi 318 (481)
T 1qvb_A 240 NMIQAHARAYDNIKRFSKK-PVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRDLANRLDWLGV 318 (481)
T ss_dssp HHHHHHHHHHHHHHHHCCS-CEEEEEECCEEECSSSCCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTTTSSCCSEEEE
T ss_pred HHHHHHHHHHHHHHHhCcC-cEEEEeeCCeeecCCCCHHHHHHHHHHHhhhhhHHHhCCCCCCCCCCCHHHcCCCceEEE
Confidence 1222234677888998887 3322 22110 0111 010 110 0 0223578888
Q ss_pred eecCCCCcccc--------C-----------------ccchhh--hHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC
Q 019395 238 HYYNLFSNNFN--------G-----------------LNVQQN--IDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK 290 (341)
Q Consensus 238 H~Y~~~~~~~~--------~-----------------~~~~~~--~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~ 290 (341)
++|........ . ....+. ..-+ ...+..+.+..+.|++|+|-|++...+
T Consensus 319 NyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gW~i~P~GL----~~~L~~~~~rY~~Pi~ITENG~~~~~D 394 (481)
T 1qvb_A 319 NYYSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVYPEGL----YLLLKELYNRYGVDLIVTENGVSDSRD 394 (481)
T ss_dssp ECCCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCCTHHH----HHHHHHHHHHHCCEEEEEECCCCCTTC
T ss_pred ecccceEEeccCcccccCCccccccccccccCCCCCcCCCCCccchHHH----HHHHHHHHHHhCCCEEEEeCCCCcccc
Confidence 88864210000 0 000000 0111 112222333346689999999876544
Q ss_pred CCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 291 DASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
....+.+++++.+...+.++ .-.|++.|++-. +-+|.......-|++
T Consensus 395 ~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~D-n~EW~~Gy~~RfGLv 443 (481)
T 1qvb_A 395 ALRPAYLVSHVYSVWKAANEGIPVKGYLHWSLTD-NYEWAQGFRQKFGLV 443 (481)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGTTSSCCCSE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEEeccccc-cccccCCCCCCceEE
Confidence 44556778888888888876 457999999863 345655444445544
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-16 Score=159.35 Aligned_cols=215 Identities=15% Similarity=0.181 Sum_probs=145.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++|++.||++|+|+||+.. + | .. ++++++|.++||+|+.++|..... ....
T Consensus 347 ~~d~~~~k~~G~N~vR~~h-~-----p-----~~-------~~~~~~cD~~Gi~V~~e~~~~~~~-----------~~~~ 397 (613)
T 3hn3_A 347 VKDFNLLRWLGANAFRTSH-Y-----P-----YA-------EEVMQMCDRYGIVVIDECPGVGLA-----------LPQF 397 (613)
T ss_dssp HHHHHHHHHHTCCEEECTT-S-----C-----CC-------HHHHHHHHHHTCEEEEECSCBCCC-----------SGGG
T ss_pred HHHHHHHHHcCCCEEEccC-C-----C-----Ch-------HHHHHHHHHCCCEEEEeccccccc-----------cccc
Confidence 7899999999999999832 1 1 11 268899999999999998753100 0112
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 224 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~ 224 (341)
|.+...+.+.+.++.+++|++++|.|++|++.|||.. ..+....+++++++.||+.||+++|...... ++..
T Consensus 398 ~~~~~~~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~---~~~~~~~~~~~l~~~~k~~DptRpv~~~~~~---~~~~-- 469 (613)
T 3hn3_A 398 FNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNS---NYAA-- 469 (613)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCT---TSHHHHHHHHHHHHHHHHHCTTSCEEEEECS---CTTT--
T ss_pred cChHHHHHHHHHHHHHHHHhCCCCeEEEEecccCccc---ccchHHHHHHHHHHHHHHhCCCCCEEEEccc---Cccc--
Confidence 3356677888999999999999999999999999974 2245788999999999999999999984211 1111
Q ss_pred hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-------CCCHHHH
Q 019395 225 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------DASKQDY 297 (341)
Q Consensus 225 ~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-------~~~~~~~ 297 (341)
........|+++|.|..+-... ...+ .+.......+..+.+..++|++++|||+..... .-+.+..
T Consensus 470 -~~~~~~~Dv~~~n~Y~~wy~~~--~~~~----~~~~~l~~~~~~~~~~~~kPi~isE~G~~~~~g~~~~~~~~~seeyQ 542 (613)
T 3hn3_A 470 -DKGAPYVDVICLNSYYSWYHDY--GHLE----LIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQ 542 (613)
T ss_dssp -CSSGGGCSSEEEECCBTTTBST--TCGG----GHHHHHHHHHHHHHHHHCSCEEEEECCCCBCTTCCCSSCCTBSHHHH
T ss_pred -cccccccceeEEeccccccCCC--ccHH----HHHHHHHHHHHHHHHhcCCCEEEEeeCCCCCCCcccCCCCCCCHHHH
Confidence 0011223578999997542111 1111 111112222333334446789999999864211 1235666
Q ss_pred HHHHHHHHHHHcc----CCCcEEEeccccC
Q 019395 298 QRFANAQLDVYGR----ATFGWAYWAHKCE 323 (341)
Q Consensus 298 ~~~~~~~~~~~~~----~~~Gw~~W~~k~~ 323 (341)
..|++.++.++++ ..+|++.|++..-
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~Df 572 (613)
T 3hn3_A 543 KSLLEQYHLGLDQKRRKYVVGELIWNFADF 572 (613)
T ss_dssp HHHHHHHHHHHHTTTTTTEEEEEESCSBCB
T ss_pred HHHHHHHHHHHHhhcccceEEEEEEEeeec
Confidence 7788888887754 5679999999854
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=99.72 E-value=4.8e-18 Score=163.00 Aligned_cols=185 Identities=17% Similarity=0.192 Sum_probs=134.0
Q ss_pred ceeeeccCC-CCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccccc
Q 019395 9 TRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWI 87 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~ 87 (341)
|.+||++|. |+|+.+.||+++...... .-...+....+.|. +||+.| ++|++.|+++|+|++|++|+|..
T Consensus 10 G~AtaA~QiEGa~dGkg~siwD~~~~~~---~~~~~~~~~~~~A~----D~Yhry--~eDi~lm~~lG~~~~Rfsi~W~R 80 (479)
T 4b3l_A 10 GGATSGPQSEGRFAKQHRNLFDYWYEEE---PDLFYDYVGPDTAS----DAYHQI--ESDLTLLASLGHNSYRTSIQWTR 80 (479)
T ss_dssp EEECCHHHHSCSTTCCSCBHHHHHHHHC---GGGSGGGCCTTTTT----CHHHHH--HHHHHHHHTTTCCEEEEECCHHH
T ss_pred EEEChHHhhccCCCCCCccHHHHHhhcC---CccccCCCCCcccc----chHHHH--HHHHHHHHHcCCCEEEeecCHHH
Confidence 678999999 999558999988543110 00111233344555 888888 99999999999999999999864
Q ss_pred ccCCC-CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhC
Q 019395 88 ANDPT-PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYA 165 (341)
Q Consensus 88 ~~~~~-~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~ 165 (341)
+.|. ..+.+++++++.++++|+.+.++||.++|+|+|+..++...+. ...|. ++.++.|+++.+.++++|+
T Consensus 81 -i~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~dlP~~L~~~------yGGW~nr~~vd~F~~YA~~~f~~fg 153 (479)
T 4b3l_A 81 -LIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPIALYQA------YGGWESKHVVDLFVAFSKVCFEQFG 153 (479)
T ss_dssp -HBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSSCCBHHHHHH------HCGGGCHHHHHHHHHHHHHHHHHHT
T ss_pred -hccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCCCcCHHHHHh------cCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 4455 3357888999999999999999999999999998654322111 12377 8899999999999999999
Q ss_pred CCCceeEEEeecCCCC------------CCC-ChH-------HHHHHHHHHHHHHHhcC---CCceEEE
Q 019395 166 NRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKAGYDAVRKYT---STAYVIM 211 (341)
Q Consensus 166 ~~~~v~~~el~NEP~~------------~~~-~~~-------~~~~~~~~~~~aIR~~~---p~~~v~~ 211 (341)
++... |-++|||+. |+. +.. .+.....++++++|+.. |+..|-+
T Consensus 154 drVk~--WiT~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~~~~IGi 220 (479)
T 4b3l_A 154 DRVKD--WFVHNEPMVVVEGSYLMQFHYPAIVDGKKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGT 220 (479)
T ss_dssp TTCCE--EEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSSSEEEE
T ss_pred ccCCe--EEEccCcchhhhccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCEEEE
Confidence 97555 669999973 111 111 22233446678888888 7655544
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-18 Score=162.12 Aligned_cols=152 Identities=20% Similarity=0.273 Sum_probs=118.5
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++...... .-........+.|. +||+.| ++|++.||++|+|+.|++|+|
T Consensus 19 G~AtaA~QiEGa~~~dGkg~SiwD~~~~~~---~~~i~~~~~gd~A~----D~Yhry--~EDi~Lm~elG~~~yRfSIsW 89 (487)
T 3vii_A 19 GAATASYQIEGAWDENGKGPNIWDTLTHEH---PDYVVDGATGDIAD----DSYHLY--KEDVKILKELGAQVYRFSISW 89 (487)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHHHC---GGGSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEeccHHhcCCCcCCCCCcccHHHhHhhcC---CccccCCCCCCccc----ChHHHH--HHHHHHHHHcCCCEEEeeCCH
Confidence 578999999 99955 7899988543110 00111222234455 888888 999999999999999999999
Q ss_pred ccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
..++ |.. .+++++++++.++++|+.|.++||.++|+|+|+..++...+.+| |. ++.++.|.++.+.++++
T Consensus 90 sRI~-P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H~DlP~~L~~~GG-------W~nr~~v~~F~~YA~~~f~~ 161 (487)
T 3vii_A 90 ARVL-PEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQALQDLGG-------WPNLVLAKYSENYARVLFKN 161 (487)
T ss_dssp HHHS-TTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTS-------TTSTHHHHHHHHHHHHHHHH
T ss_pred HHcC-cCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEecCCCcHHHHHcCC-------CCCHHHHHHHHHHHHHHHHH
Confidence 6554 443 45778999999999999999999999999999976654433333 77 89999999999999999
Q ss_pred hCCCCceeEEEeecCC
Q 019395 164 YANRPSLAAIELINEP 179 (341)
Q Consensus 164 y~~~~~v~~~el~NEP 179 (341)
|++.... |-++|||
T Consensus 162 fgdrVk~--W~T~NEp 175 (487)
T 3vii_A 162 FGDRVKL--WLTFNEP 175 (487)
T ss_dssp HTTTCCE--EEEEECH
T ss_pred hcCCCCe--EEEecCc
Confidence 9997655 5599999
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-15 Score=150.85 Aligned_cols=226 Identities=19% Similarity=0.204 Sum_probs=148.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCC---CCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN---GNEHSATRDG 141 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~---~~~~~g~~~~ 141 (341)
++|++.||++|+|+||++.. | .. ++++++|.++||+|+.+++....... ++.. +.. .
T Consensus 314 ~~di~l~k~~g~N~vR~~hy------p-----~~-------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~-~~~-~ 373 (605)
T 3lpf_A 314 VHDHALMDWIGANSYRTSHY------P-----YA-------EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEA-GNK-P 373 (605)
T ss_dssp HHHHHHHHHHTCCEEEECSS------C-----CC-------HHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCC-CCC-C
T ss_pred HHHHHHHHHCCCcEEEecCC------C-----Cc-------HHHHHHHHhcCCEEEEecccccccccccccccc-ccC-c
Confidence 78999999999999998431 1 11 37889999999999999975421110 0111 100 0
Q ss_pred ccCC-----chhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC-
Q 019395 142 FQEW-----GDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL- 215 (341)
Q Consensus 142 ~~~w-----~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~- 215 (341)
...+ .+...+.+.+.++.+++|++++|.|++|.+.|||... ......+++++++.+|+.||+++|......
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~ 450 (605)
T 3lpf_A 374 KELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTR---PQGAREYFAPLAEATRKLDPTRPITCVNVMF 450 (605)
T ss_dssp SCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCCC---STTHHHHHHHHHHHHHHHCSSSCEEEEEETT
T ss_pred cccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCcccccc---cchHHHHHHHHHHHHHHHCCCCcEEEecccc
Confidence 0112 1466788889999999999999999999999999742 234567899999999999999999986321
Q ss_pred CCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC------
Q 019395 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV------ 289 (341)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~------ 289 (341)
.......+. .--.|+++|.|..+-.. ... ++.+.......+..+.+..++|++++|||+....
T Consensus 451 ~~~~~d~~~-----~~~Dvig~N~Y~gwY~~--~g~----~~~~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~ 519 (605)
T 3lpf_A 451 CDAHTDTIS-----DLFDVLCLNRYYGWYVQ--SGD----LETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMY 519 (605)
T ss_dssp SCTTTCSSG-----GGSSSEEEECCBTTTBS--TTC----HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSS
T ss_pred Ccccccccc-----cccceeeeccccccccC--CCc----hHHHHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCC
Confidence 111111111 12347888888654210 111 1222222222233344444678999999975321
Q ss_pred -CCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCC
Q 019395 290 -KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEA 324 (341)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~ 324 (341)
..-+.+....+++.+++++++ ..+|++.|+|..-.
T Consensus 520 ~~~~sEeyq~~~~~~~~~~~~~~~~~~G~~iW~~~Df~ 557 (605)
T 3lpf_A 520 TDMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFA 557 (605)
T ss_dssp CCTTSHHHHHHHHHHHHHHHTTCTTEEEEEEEEEECBC
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEeeeec
Confidence 123566677889999999987 56899999988543
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-15 Score=153.73 Aligned_cols=120 Identities=23% Similarity=0.303 Sum_probs=87.7
Q ss_pred HHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-CCC-------
Q 019395 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGS------- 129 (341)
Q Consensus 58 ~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-~g~------- 129 (341)
||+....++|++.||++|+|+||+++..|...+|.++ .|+ ++.||++|+.|+++||+||+++++. +..
T Consensus 10 ~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g-~~d---~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~P 85 (645)
T 1kwg_A 10 HWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPG-RLE---WGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRYP 85 (645)
T ss_dssp GSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTT-BCC---CHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHCG
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCC-ccC---hHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcCC
Confidence 4544455999999999999999999744566777653 554 6789999999999999999999432 110
Q ss_pred ------CCCCC-CCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 130 ------QNGNE-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 130 ------~~~~~-~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
.++.. ..|.+...+...+.+.+.+.++++.|++||+++|.|++|++.|||..
T Consensus 86 ~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~ 144 (645)
T 1kwg_A 86 EILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGC 144 (645)
T ss_dssp GGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTT
T ss_pred ceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCC
Confidence 00100 01111111112267889999999999999999999999999999975
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.1e-18 Score=160.98 Aligned_cols=154 Identities=17% Similarity=0.216 Sum_probs=117.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|++ +.||+++..... +-........+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 27 G~AtaA~QiEGa~~edGkg~SiwD~~~~~----~~~i~~~~~gd~A~----D~Yhry--keDi~lm~elG~~~yRfsIsW 96 (481)
T 3f5l_A 27 GTVTSAYQVEGMAASGGRGPSIWDAFAHT----PGNVAGNQNGDVAT----DQYHRY--KEDVNLMKSLNFDAYRFSISW 96 (481)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHTS----TTSSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred EEEchhhhhccCcCCCCCcCchhhhhhcC----CCcccCCCCCCccc----chhhhH--HHHHHHHHHcCCCEEEecCcH
Confidence 578999999 99965 789998854321 00111222234454 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+.+++++++.++++|+.|.++||.++|+|||+..++...+. ...|. ++.++.|.++++.+++||
T Consensus 97 sR-I~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~------yGGW~nr~~v~~F~~Ya~~~~~~f 169 (481)
T 3f5l_A 97 SR-IFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLALEKK------YGGWLNAKMADLFTEYADFCFKTF 169 (481)
T ss_dssp HH-HCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCSSCCBHHHHHH------HCGGGSTTHHHHHHHHHHHHHHHH
T ss_pred HH-hCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHHHHHH------hCCCCCHHHHHHHHHHHHHHHHHh
Confidence 64 45554346888999999999999999999999999998654332111 12276 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
++.... |.++|||+.
T Consensus 170 gd~Vk~--W~T~NEp~~ 184 (481)
T 3f5l_A 170 GNRVKH--WFTFNQPRI 184 (481)
T ss_dssp TTTCCE--EEEEECHHH
T ss_pred CCCCCe--EEEccCchH
Confidence 986554 669999973
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-17 Score=159.91 Aligned_cols=158 Identities=17% Similarity=0.238 Sum_probs=117.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhh------cCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEE
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNG------FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAV 79 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~V 79 (341)
|..||++|. |+|.+ +.||+++.+.......+-....+ ...+.|. +||+.| ++|++.||++|+|++
T Consensus 18 G~AtaA~QiEGa~~~dGkg~siwD~~~~~~~~~p~~i~~~~~~~~~~~~~~A~----D~Yhry--~eDi~Lm~elG~~~y 91 (481)
T 3qom_A 18 GGAVAAHQLEGGYKEGGKGLSTADIMTLGTNERPREITDGVVAGKYYPNHQAI----DFYHRY--PEDIELFAEMGFKCF 91 (481)
T ss_dssp EEECCHHHHCCCTTGGGCCCBGGGGBCCCCSSSCCCBCSSCCTTCCCTTTTTT----CHHHHH--HHHHHHHHHHTCSEE
T ss_pred EEechHHHhcCCcCCCCCCCChhhcccccccCCcccccCCccccccCCCCccc----cHHHHH--HHHHHHHHHcCCCEE
Confidence 578999999 99965 89999986432100000001111 1234455 888888 999999999999999
Q ss_pred EcCcccccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHH
Q 019395 80 RIPVGWWIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVI 157 (341)
Q Consensus 80 Rlpi~~~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~ 157 (341)
|++|+|..++ |.+ .++.++++++.++++|+.|.++||.++|+|+|+..++...+. ...|. ++.++.|+++.
T Consensus 92 RfSIsWsRI~-P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~DlP~~L~~~------yGGW~nr~~v~~F~~YA 164 (481)
T 3qom_A 92 RTSIAWTRIF-PNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEMPYHLVKQ------YGGWRNRKLIQFYLNFA 164 (481)
T ss_dssp EEECCHHHHS-SSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHH
T ss_pred EecCcHHHcC-cCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHHhh------cCCCCCHHHHHHHHHHH
Confidence 9999996554 443 246788999999999999999999999999998655432111 12276 78999999999
Q ss_pred HHHHHHhCCCCceeEEEeecCCCC
Q 019395 158 DFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 158 ~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
+.+++||+++... |-++|||+.
T Consensus 165 ~~~f~~fgdrVk~--W~T~NEp~~ 186 (481)
T 3qom_A 165 KVCFERYRDKVTY--WMTFNEINN 186 (481)
T ss_dssp HHHHHHTTTTCCE--EEEETTGGG
T ss_pred HHHHHHhCCcCCE--EEEccCccH
Confidence 9999999986555 669999973
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=8.3e-18 Score=161.72 Aligned_cols=154 Identities=18% Similarity=0.229 Sum_probs=117.5
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++..... +-........+.|. +||+.| ++|++.|+++|+|++|++|.|
T Consensus 24 G~AtaA~QiEGa~~edGkg~SiwD~~~~~----~~~i~~~~~gd~A~----D~YhrY--~eDi~lm~elG~~~yRfsI~W 93 (488)
T 3gnp_A 24 GTASAAYQYEGAVKEDGRGQTIWDTFAHT----FGKITDFSNADVAV----DQYHRF--EEDIQLMADMGMDAYRFSIAW 93 (488)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS----TTSSTTSCCCSSTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH
T ss_pred EEEchHHHhCCCcCCCCCcCchhhhhhcC----CCcccCCCCCCccc----chhhhH--HHHHHHHHHcCCCEEEecccH
Confidence 578999999 99965 789998854321 00111122233455 888888 999999999999999999998
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+.+++++++.++++|+.|.++||.++|+|||+..++...+. ...|. ++.++.|.++++.+++||
T Consensus 94 sR-I~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~------yGGW~n~~~v~~F~~Ya~~~~~~f 166 (488)
T 3gnp_A 94 SR-IYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQALEDK------YKGWLDRQIVDDFAAYAETCFREF 166 (488)
T ss_dssp HH-HCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHHHH
T ss_pred HH-eeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHH------hCCCCCHHHHHHHHHHHHHHHHHh
Confidence 64 45555457889999999999999999999999999998654322111 12276 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
++.... |.++|||+.
T Consensus 167 gd~Vk~--W~T~NEp~~ 181 (488)
T 3gnp_A 167 GDRVKH--WITLNEPHT 181 (488)
T ss_dssp TTTCCE--EEEEECHHH
T ss_pred CCCCCE--EEEccCcch
Confidence 996544 669999973
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-17 Score=162.87 Aligned_cols=154 Identities=20% Similarity=0.233 Sum_probs=119.0
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-........+.|. +||+.| ++|+++||++|+|+.|++|+|
T Consensus 29 G~AtaA~QiEGa~~~dGkg~SiwD~~~~~~---p~~~~~~~~gdvA~----D~Yhry--~EDi~Lm~elG~~~yRfSIsW 99 (540)
T 4a3y_A 29 GTGSSAYQIEGGARDGGRGPSIWDTFTHRR---PDMIRGGTNGDVAV----DSYHLY--KEDVNILKNLGLDAYRFSISW 99 (540)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeechHhhhcCCcCCCCCcccHHHhhhccC---CCcccCCCCCCccc----chhHhh--HHHHHHHHHcCCCEEEeeccH
Confidence 578999999 99955 7899987543110 11112223344455 888888 999999999999999999999
Q ss_pred ccccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
..++ |.. .++.++++++.++++|+.|.++||.++|+|||+..++.-.+. ...|. ++.++.|+++.+.+++
T Consensus 100 sRI~-P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~dlP~~L~~~------yGGW~nr~~v~~F~~Ya~~~f~ 172 (540)
T 4a3y_A 100 SRVL-PGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDE------YGGFLSPRIVDDFCEYAELCFW 172 (540)
T ss_dssp HHHS-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHH
T ss_pred hhcc-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccCCCCcHHHHhc------cCCcCChHHHHHHHHHHHHHHH
Confidence 6554 443 246789999999999999999999999999999765433221 12377 8999999999999999
Q ss_pred HhCCCCceeEEEeecCCC
Q 019395 163 RYANRPSLAAIELINEPL 180 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~ 180 (341)
+|++.... |-.+|||+
T Consensus 173 ~fgdrVk~--W~T~NEP~ 188 (540)
T 4a3y_A 173 EFGDRVKH--WMTLNEPW 188 (540)
T ss_dssp HHTTTCCE--EEEEECHH
T ss_pred HhccccCE--eeEccccH
Confidence 99997766 55999996
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-17 Score=160.06 Aligned_cols=155 Identities=17% Similarity=0.240 Sum_probs=117.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++...... +-........+.|. +||+.| ++|++.||++|+|++|++|+|
T Consensus 41 G~AtaA~QiEGa~~edGkg~SiWD~~~~~~---p~~i~~~~~gd~A~----D~Yhry--kEDi~Lm~elG~~~yRfSIsW 111 (505)
T 3ptm_A 41 GTASSSYQYEGGAAEGGRGPSIWDTFTHQH---PEKIADRSNGDVAS----DSYHLY--KEDVRLMKDMGMDAYRFSISW 111 (505)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEEChhHhhcCCcCCCCCcCchhhhhhhcC---CCcccCCCCCCccc----cHHHHH--HHHHHHHHHcCCCEEEeeccH
Confidence 578999999 99855 7899988543100 01111122233454 888888 999999999999999999999
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
..+ .|.+. +++++++++.++++|+.|.++||.++|+|+|+..++...+. ...|. ++.++.|.++.+.+++
T Consensus 112 sRI-~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~HwDlP~~L~~~------yGGW~nr~~v~~F~~YA~~~f~ 184 (505)
T 3ptm_A 112 TRI-LPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDK------YNGFLSPNIINDFKDYAEICFK 184 (505)
T ss_dssp HHH-STTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHH
T ss_pred HHc-CcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCcHHHHHh------cCCcCCHHHHHHHHHHHHHHHH
Confidence 654 45443 47789999999999999999999999999998665432221 12277 8899999999999999
Q ss_pred HhCCCCceeEEEeecCCCC
Q 019395 163 RYANRPSLAAIELINEPLA 181 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~~ 181 (341)
||+++... |-++|||+.
T Consensus 185 ~fgDrVk~--W~T~NEp~~ 201 (505)
T 3ptm_A 185 EFGDRVKN--WITFNEPWT 201 (505)
T ss_dssp HHTTTCCE--EEEEECHHH
T ss_pred HhCccCce--EEEecCcch
Confidence 99996555 669999973
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-17 Score=157.66 Aligned_cols=153 Identities=16% Similarity=0.224 Sum_probs=117.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 12 G~Ataa~QiEGa~~~dGkg~SiwD~~~~~~---~~~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW 82 (464)
T 1wcg_A 12 GTSTASYQIEGGWNEDGKGENIWDRLVHTS---PEVIKDGTNGDIAC----DSYHKY--KEDVAIIKDLNLKFYRFSISW 82 (464)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eEeChhHhhcCCcCCCCCcCchheeecccC---CCcccCCCCCcccc----chHHhh--HHHHHHHHHhCCCeEEecccH
Confidence 568999999 99854 7899988542100 00111112234455 888888 999999999999999999998
Q ss_pred ccccCCCCC-CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP-KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~~-~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
. .+.|.+. +.+++++++.++++|+.|.++||.++|+|+|+.-++...+.. .|. +...+.|.++.+.+++|
T Consensus 83 s-Ri~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H~d~P~~L~~~g-------gw~~r~~~~~f~~ya~~~~~~ 154 (464)
T 1wcg_A 83 A-RIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLG-------GWVNPIMSDYFKEYARVLFTY 154 (464)
T ss_dssp H-HHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTT-------GGGSTTHHHHHHHHHHHHHHH
T ss_pred H-HhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCcchhhcC-------CCCChhHHHHHHHHHHHHHHH
Confidence 5 4556553 578889999999999999999999999999885543222211 366 78999999999999999
Q ss_pred hCCCCceeEEEeecCCC
Q 019395 164 YANRPSLAAIELINEPL 180 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~ 180 (341)
|+++ |..|.++|||.
T Consensus 155 ~gd~--V~~W~t~NEp~ 169 (464)
T 1wcg_A 155 FGDR--VKWWITFNEPI 169 (464)
T ss_dssp HTTT--CCEEEEEECHH
T ss_pred hCCc--CcEEEEccccc
Confidence 9986 66688999997
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=2.2e-17 Score=159.21 Aligned_cols=154 Identities=20% Similarity=0.231 Sum_probs=117.6
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+.... +-........+.|. +||+.| ++|++.||++|+|++|++|+|
T Consensus 29 G~AtaAyQiEGa~~edGkg~SiWD~~~~~~---p~~i~~~~~gd~A~----D~YhrY--kEDi~Lm~elG~~~yRfSIsW 99 (513)
T 4atd_A 29 GTGSSAYQIEGGARDGGRGPSIWDTFTHRR---PDMIRGGTNGDVAV----DSYHLY--KEDVNILKNLGLDAYRFSISW 99 (513)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEechhhhhcCCcCCCCCcCchhhhhhhcC---CCcccCCCCCCccc----chHHHH--HHHHHHHHHcCCCEEEEeCcH
Confidence 578999999 99955 7899988543110 11111222334454 888888 999999999999999999998
Q ss_pred ccccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
..+ .|.+ .+++++++++.++++|+.|.++||.++|+|+|+..++...+. ...|. ++.++.|.++.+.+++
T Consensus 100 sRI-~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~------yGGW~nr~~v~~F~~YA~~~f~ 172 (513)
T 4atd_A 100 SRV-LPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVPQALEDE------YGGFLSPRIVDDFCEYAELCFW 172 (513)
T ss_dssp HHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTTHHHHHHHHHHHHHH
T ss_pred HHc-CCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHHHH------cCCcCCHHHHHHHHHHHHHHHH
Confidence 654 4544 257788999999999999999999999999998655432211 12276 7899999999999999
Q ss_pred HhCCCCceeEEEeecCCC
Q 019395 163 RYANRPSLAAIELINEPL 180 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~ 180 (341)
+|+++... |-++|||+
T Consensus 173 ~fgdrVk~--WiT~NEp~ 188 (513)
T 4atd_A 173 EFGDRVKH--WMTLNEPW 188 (513)
T ss_dssp HHTTTCCE--EEEEECHH
T ss_pred HhcCcCce--EEEccCcc
Confidence 99997555 66999997
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2.9e-17 Score=158.70 Aligned_cols=155 Identities=17% Similarity=0.252 Sum_probs=117.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 31 G~AtsA~QiEGa~~edGkg~SiwD~~~~~~---p~~i~~~~~~~~A~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW 101 (512)
T 1v08_A 31 GAATSAYQIEGAWNEDGKGESNWDHFCHNH---PERILDGSNSDIGA----NSYHMY--KTDVRLLKEMGMDAYRFSISW 101 (512)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCCSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred EEecchHhhcCCcCCCCCcCcceeeecccC---CCcccCCCCCcccc----chHHHH--HHHHHHHHHhCCCeEecccCH
Confidence 568999999 99865 7899988542100 00111111234455 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-h---hHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-D---SNVADTVAVIDF 159 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~---~~~~~~~~~~~~ 159 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+|+.-++...+. ...|. + ...+.|.++++.
T Consensus 102 s-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~r~~c~~~~~f~~ya~~ 174 (512)
T 1v08_A 102 P-RILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVPQALEEK------YGGFLDKSHKSIVEDYTYFAKV 174 (512)
T ss_dssp H-HHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGCTTSSHHHHHHHHHHHH
T ss_pred h-hhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhh------CCCCCCccccchHHHHHHHHHH
Confidence 5 4556553 57889999999999999999999999999987543321110 12365 6 889999999999
Q ss_pred HHHHhCCCCceeEEEeecCCCC
Q 019395 160 LAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 160 la~~y~~~~~v~~~el~NEP~~ 181 (341)
+++||+++ |..|.++|||..
T Consensus 175 ~~~~~gd~--V~~W~t~NEp~~ 194 (512)
T 1v08_A 175 CFDNFGDK--VKNWLTFNDPQT 194 (512)
T ss_dssp HHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHhCCc--ceEEEEcccchh
Confidence 99999996 777999999973
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.5e-17 Score=156.72 Aligned_cols=155 Identities=15% Similarity=0.198 Sum_probs=117.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 26 G~AtaA~QiEGa~~edGkg~SiwD~~~~~~---p~~~~~~~~~~~A~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW 96 (490)
T 1cbg_A 26 GTASSAFQYEGAAFEDGKGPSIWDTFTHKY---PEKIKDRTNGDVAI----DEYHRY--KEDIGIMKDMNLDAYRFSISW 96 (490)
T ss_dssp EEECCHHHHCCCSSSTTCCCBHHHHHHHHC---GGGSTTCCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred EEecchhhhcCCcCCCCCcCeeeeeecccC---CCcccCCCCCcccc----ChHHHH--HHHHHHHHHhCCCeEEecccH
Confidence 568999999 99865 7899988542100 00111112234455 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+|+.-++...+. ...|. +...+.|.++.+.+++
T Consensus 97 s-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~~~~~~~f~~ya~~~~~ 169 (490)
T 1cbg_A 97 P-RVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDE------YRGFLGRNIVDDFRDYAELCFK 169 (490)
T ss_dssp H-HHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTTHHHHHHHHHHHHHH
T ss_pred H-HhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCHhHHhh------cCCcCCchHHHHHHHHHHHHHH
Confidence 5 4556553 57889999999999999999999999999988544321111 02366 6789999999999999
Q ss_pred HhCCCCceeEEEeecCCCC
Q 019395 163 RYANRPSLAAIELINEPLA 181 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~~ 181 (341)
||+++ |..|.++|||..
T Consensus 170 ~~gd~--V~~W~t~NEp~~ 186 (490)
T 1cbg_A 170 EFGDR--VKHWITLNEPWG 186 (490)
T ss_dssp HHTTT--CCEEEEEECHHH
T ss_pred HhCCc--ceEEEEccCchh
Confidence 99996 666889999973
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-17 Score=156.61 Aligned_cols=154 Identities=20% Similarity=0.248 Sum_probs=117.2
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+... .. . ...+.-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 10 G~Ataa~QiEGa~~~dGkg~SiwD~~~~~-~~-~-~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW 80 (469)
T 2e9l_A 10 AAATAAYQVEGGWDADGKGPCVWDTFTHQ-GG-E-RVFKNQTGDVAC----GSYTLW--EEDLKCIKQLGLTHYRFSLSW 80 (469)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHHH-CS-S-SSGGGCCSSSTT----CTTTCH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eEecchhhhcCCcCCCCCcccceeecccC-CC-c-cccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEEccccH
Confidence 568999999 99855 789998854210 00 0 111122234455 888888 999999999999999999988
Q ss_pred ccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
. .+.|.+ .+.+++++++.++++|+.|.++||.++|+|+|+.-++...+. ..|. +...+.|.++.+.+++|
T Consensus 81 s-Ri~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d~P~~l~~~-------ggw~~r~~~~~f~~ya~~~~~~ 152 (469)
T 2e9l_A 81 S-RLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQ-------GGWLSEAIIESFDKYAQFCFST 152 (469)
T ss_dssp H-HHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHT-------TGGGSTHHHHHHHHHHHHHHHH
T ss_pred h-hcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCCCCcchhhc-------CCCCCchHHHHHHHHHHHHHHH
Confidence 5 455554 357888999999999999999999999999887544321111 1366 78899999999999999
Q ss_pred hCCCCceeEEEeecCCCC
Q 019395 164 YANRPSLAAIELINEPLA 181 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~ 181 (341)
|+++ |..|.++|||..
T Consensus 153 ~gd~--V~~W~t~NEp~~ 168 (469)
T 2e9l_A 153 FGDR--VKQWITINEANV 168 (469)
T ss_dssp HTTT--CCEEEEESCHHH
T ss_pred hcCc--CCEEEEccCcch
Confidence 9986 666889999973
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=148.79 Aligned_cols=252 Identities=12% Similarity=0.118 Sum_probs=140.4
Q ss_pred HHHHHHHH-HCCCCEEEcCccccccc-----CC-CCCC--CcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFLS-SNGINAVRIPVGWWIAN-----DP-TPPK--PFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~-~~G~N~VRlpi~~~~~~-----~~-~~~~--~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
++|++.|+ ++|||+||+++.|...+ .+ ...+ .| .+..+|++++.|+++||+++|+|++.|........
T Consensus 36 ~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~---~~~~~D~~~~~~~~~Gi~p~v~l~~~P~~~~~~~~ 112 (500)
T 1uhv_A 36 IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFY---NFTYIDRIFDSFLEIGIRPFVEIGFMPKKLASGTQ 112 (500)
T ss_dssp HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEE---CCHHHHHHHHHHHHHTCEECEEECCCCTTTBSSCC
T ss_pred HHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEE---ehhHHHHHHHHHHHCCCEEEEEEccChHHHhCCCC
Confidence 89999998 99999999999885311 11 0011 11 37899999999999999999999997754321000
Q ss_pred CCCCCCccCCc-hhHHHHHHHHH----HHHHHHhCCC-CceeEEEeecCCCCCC----CChHHHHHHHHHHHHHHHhcCC
Q 019395 136 SATRDGFQEWG-DSNVADTVAVI----DFLAARYANR-PSLAAIELINEPLAPG----VALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 136 ~g~~~~~~~w~-~~~~~~~~~~~----~~la~~y~~~-~~v~~~el~NEP~~~~----~~~~~~~~~~~~~~~aIR~~~p 205 (341)
. .......+. +...+.+.+++ +.+.+||++. ...+.|+++|||+... .+.+.+.+++.+++++||+++|
T Consensus 113 ~-~~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ryg~~~V~~W~~~~~NEpn~~~~~~~~~~~~y~~~~~~~~~~ik~~~P 191 (500)
T 1uhv_A 113 T-VFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVNE 191 (500)
T ss_dssp E-ETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCT
T ss_pred c-eeecCCCCCCCcCHHHHHHHHHHHHHHHHHhcCccceeeeeEEEeeCCCCcccCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 0 000000011 33344555544 4455566553 2222579999998621 2556788899999999999999
Q ss_pred CceEEEeCCCC-CCCh-hhhhhcc--CCCCcEEEEeeecCCCCcccc----C---ccchhhhHHHHhhhhhhhhhhhccC
Q 019395 206 TAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLFSNNFN----G---LNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 206 ~~~v~~~~~~~-~~~~-~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
+..|......+ ...+ ..++... ....-.++++|.|........ . ...+...+.+...+ +.+... ...
T Consensus 192 ~~~vggp~~~~~~~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~l~~~-~~~ 269 (500)
T 1uhv_A 192 NLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFKTVR-EIIKNS-HFP 269 (500)
T ss_dssp TSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHHHHHH-HHHHTS-SCT
T ss_pred CCEEECcccCCCchHHHHHHHHHHHhCCCCCcEEEEeecCCCcccccccccccccCCHHHHHHHHHHHH-HHHHhc-CCC
Confidence 97774322111 1111 2343322 123457999999975431000 0 01111122221111 111111 123
Q ss_pred CCceEEEeecCCCCCCC--CCHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 275 GPLTFVGEWTCEWNVKD--ASKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 275 ~~pv~vGE~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
+.||+|+|||....... .+......|+...+........+.++|++..
T Consensus 270 ~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~~~~~~v~~~~~W~l~D 319 (500)
T 1uhv_A 270 NLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 319 (500)
T ss_dssp TCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred CCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHHHHHhhhhheeeeEEec
Confidence 67899999998653211 1112234555444433322344788999863
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=147.32 Aligned_cols=253 Identities=12% Similarity=0.124 Sum_probs=143.4
Q ss_pred HHHHHHhhccCHHHHHHHH-HCCCCEEEcCccccccc---CCCC---CC--CcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 54 VLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWWIAN---DPTP---PK--PFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 54 ~~~~~~~~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~---~~~~---~~--~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+..++ +++++.|+ ++|+|+||+++.|...+ ...+ .+ .| .+..+|++++.|+++||+++|.|+
T Consensus 30 ~~r~~~-----~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~---n~~~~D~~~~~~~~~Gi~p~v~l~ 101 (503)
T 1w91_A 30 ALQKEY-----LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFY---NFTYIDRIVDSYLALNIRPFIEFG 101 (503)
T ss_dssp GGBHHH-----HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEE---CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hhCHHH-----HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceee---ccHHHHHHHHHHHHCCCEEEEEEc
Confidence 344555 89999997 89999999998775211 1001 11 12 278999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCccCC----c-hhHHHHHHHHHH----HHHHHhCCCCcee--EEEeecCCCCCC----CChHHH
Q 019395 125 AAPGSQNGNEHSATRDGFQEW----G-DSNVADTVAVID----FLAARYANRPSLA--AIELINEPLAPG----VALDTL 189 (341)
Q Consensus 125 ~~~g~~~~~~~~g~~~~~~~w----~-~~~~~~~~~~~~----~la~~y~~~~~v~--~~el~NEP~~~~----~~~~~~ 189 (341)
+.|..... +.. ....| . +...+.+.++++ .+.+||++. .|- .|+++|||+..+ .+.+.+
T Consensus 102 ~~P~~~~~----~~~-~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~-~V~~W~wev~NEp~~~~~~~~~~~~~y 175 (503)
T 1w91_A 102 FMPKALAS----GDQ-TVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIE-EVRTWLFEVWNEPNLVNFWKDANKQEY 175 (503)
T ss_dssp SBCGGGBS----SCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHHTSEEEECSCTTSTTTSGGGCHHHH
T ss_pred CCcHHHhC----CCC-ceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCch-hhceeeEEEeeCCCCccCCCCCCHHHH
Confidence 87653211 000 00111 1 345555655544 455666643 143 589999998631 256678
Q ss_pred HHHHHHHHHHHHhcCCCceEEEeCCCC-CCCh-hhhhhcc--CCCCcEEEEeeecCCCCc-ccc------C-ccchhhhH
Q 019395 190 KSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KELLSFA--SGLSRVVIDVHYYNLFSN-NFN------G-LNVQQNID 257 (341)
Q Consensus 190 ~~~~~~~~~aIR~~~p~~~v~~~~~~~-~~~~-~~~~~~~--~~~~~~v~~~H~Y~~~~~-~~~------~-~~~~~~~~ 257 (341)
.+++++++++||+++|+..|...+... ...+ ..+++.. .+..-.++++|.|..... ..+ . ...+...+
T Consensus 176 ~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (503)
T 1w91_A 176 FKLYEVTARAVKSVDPHLQVGGPAICGGSDEWITDFLHFCAERRVPVDFVSRHAYTSKAPHKKTFEYYYQELEPPEDMLE 255 (503)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECSSCTHHHHHHHHHHHHTTCCCCEEEEEEECBCSCSEECSSCEECCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeEEeeeccCCchHHHHHHHHHHHhCCCCCCEEEEeecCCCccccccccccccccCCHHHHHH
Confidence 999999999999999998774322111 1111 2344321 233567999999975321 000 0 01111111
Q ss_pred HHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCC--CHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 258 YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
.+.. ..+.+... ...+.||+|+|||..+..... +......|+...+........+..+|++..
T Consensus 256 ~i~~-~~~~~~~~-~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~~~~~~v~~~~~w~~~D 320 (503)
T 1w91_A 256 QFKT-VRALIRQS-PFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSD 320 (503)
T ss_dssp HHHH-HHHHHHTS-SSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred HHHH-HHHHHHhc-CCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHHHHhhhhheEEEEEEec
Confidence 2111 11111111 123578999999986532111 112234555444433322334788999863
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.4e-17 Score=157.63 Aligned_cols=155 Identities=16% Similarity=0.227 Sum_probs=117.0
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|.|
T Consensus 81 G~ATaAyQiEGa~~edGkg~SiWD~f~~~~---p~~i~~~~~gdvA~----D~Y~~y--~eDi~lm~~lG~~~~RfsIsW 151 (565)
T 2dga_A 81 GASTSAYQIEGAWNEDGKGPSTWDHFCHTY---PERISDMTNGDVAA----NSYHLY--EEDVKALKDMGMKVYRFSISW 151 (565)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eEeCchHhhcCCcCCCCCcCeeeeeecccC---CCcccCCCCCcccc----chHHHH--HHHHHHHHHhCCCeEEecccH
Confidence 468899999 99864 7899988542100 00111111233454 888888 999999999999999999988
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
. .+.|.+.+.+++++++.++++|+.|.++||.++|+|+++.-++...+. ...|. +...+.|.++.+.+++||
T Consensus 152 s-RI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~r~~~~~F~~ya~~~~~~~ 224 (565)
T 2dga_A 152 S-RILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQALEDK------YGGFLNRQIVDDYKQFAEVCFKNF 224 (565)
T ss_dssp H-HHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHHHH
T ss_pred H-HhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCcHHHHHh------cCCCCCchHHHHHHHHHHHHHHHh
Confidence 5 455555357889999999999999999999999999887544321110 12366 788999999999999999
Q ss_pred CCCCceeEEEeecCCCC
Q 019395 165 ANRPSLAAIELINEPLA 181 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~ 181 (341)
+++ |..|.++|||..
T Consensus 225 gd~--V~~W~t~NEp~~ 239 (565)
T 2dga_A 225 GDR--VKNWFTFNEPHT 239 (565)
T ss_dssp TTT--CCEEEEEECHHH
T ss_pred CCC--CceEEEeccchh
Confidence 986 666889999973
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=6.4e-17 Score=157.29 Aligned_cols=155 Identities=16% Similarity=0.250 Sum_probs=117.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-...+.-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 83 G~ATsAyQiEGa~~edGkg~SiWD~f~~~~---p~~i~~~~~gdvA~----D~Yh~y--~eDi~lm~~lG~~~~R~sisW 153 (565)
T 1v02_A 83 GAATSAYQIEGAWNEDGKGPSTWDHFCHNF---PEWIVDRSNGDVAA----DSYHMY--AEDVRLLKEMGMDAYRFSISW 153 (565)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCSSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred EEEchHHHhcCCcCCCCCcCeeeeeecccC---CCcccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEEcccCH
Confidence 568899999 99865 7899888542100 01111222234455 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+++.-++...+. ...|. +...+.|.++.+.+++
T Consensus 154 s-Ri~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~r~~~~~f~~ya~~~~~ 226 (565)
T 1v02_A 154 P-RILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDA------YGGFLDERIIKDYTDFAKVCFE 226 (565)
T ss_dssp H-HHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHH
T ss_pred H-HhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhh------cCCCCCchHHHHHHHHHHHHHH
Confidence 5 4556553 57889999999999999999999999999988544321110 12366 7889999999999999
Q ss_pred HhCCCCceeEEEeecCCCC
Q 019395 163 RYANRPSLAAIELINEPLA 181 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~~ 181 (341)
||+++ |..|.++|||..
T Consensus 227 ~~gd~--V~~W~t~NEp~~ 243 (565)
T 1v02_A 227 KFGKT--VKNWLTFNEPET 243 (565)
T ss_dssp HHTTT--CCEEEEEECHHH
T ss_pred HhCCc--ceEEEEccCchh
Confidence 99986 666889999973
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.7e-17 Score=155.03 Aligned_cols=154 Identities=22% Similarity=0.316 Sum_probs=116.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+... .. .....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 16 G~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~y--~eDi~lm~~~G~~~~R~sisW 85 (465)
T 2e3z_A 16 GYATAAYQIEGSPDKDGREPSIWDTFCKA-PG---KIADGSSGDVAT----DSYNRW--REDVQLLKSYGVKAYRFSLSW 85 (465)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHTTS-TT---SSTTSCCSSSTT----CTTTTH--HHHHHHHHHTTCSEEEEECCH
T ss_pred eEeccHHHhCCCcCCCCCcCeeeeeeccC-CC---cccCCCCCcccc----chHHHh--HHHHHHHHHhCCCceecccch
Confidence 568999999 99865 789999864321 00 011112234455 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc--hhHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG--DSNVADTVAVIDFLA 161 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~--~~~~~~~~~~~~~la 161 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+|+.-++...+. ...|. +...+.|.++.+.++
T Consensus 86 s-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~~~~~~~~f~~ya~~~~ 158 (465)
T 2e3z_A 86 S-RIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLPQALDDR------YGGWLNKEEAIQDFTNYAKLCF 158 (465)
T ss_dssp H-HHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHH------HCGGGSHHHHHHHHHHHHHHHH
T ss_pred H-HhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHHHhh------cCCCCCCcchHHHHHHHHHHHH
Confidence 5 5556553 57889999999999999999999999999887544321111 01254 577899999999999
Q ss_pred HHhCCCCceeEEEeecCCCC
Q 019395 162 ARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 162 ~~y~~~~~v~~~el~NEP~~ 181 (341)
+||+++ |..|.++|||..
T Consensus 159 ~~~gd~--V~~W~t~NEp~~ 176 (465)
T 2e3z_A 159 ESFGDL--VQNWITFNEPWV 176 (465)
T ss_dssp HHHTTT--CCEEEEEECHHH
T ss_pred HHhCCC--ceEEEEccCchH
Confidence 999996 666889999973
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=9.3e-17 Score=154.76 Aligned_cols=154 Identities=11% Similarity=0.091 Sum_probs=116.9
Q ss_pred ceeeeccCC-CCcccCCcccccccccCCcchhhhh-hhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCcccc
Q 019395 9 TRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQI-TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWW 86 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~~~p~~f~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~ 86 (341)
|..||++|. |+ +.+.||+++.+... .+-.. ...-..+.|. +||+.| ++|++.|+++|+|++|++|+|.
T Consensus 32 G~AtaA~QiEGa-dGkg~SiWD~~~~~---~~~~~~~~~~~~~~A~----D~Y~~~--~eDi~lm~~lG~~~~R~sisWs 101 (501)
T 1e4m_M 32 GVASSAYQIEGT-IGRGLNIWDGFTHR---YPNKSGPDHGNGDTTC----DSFSYW--QKDIDVLDELNATGYRFSIAWS 101 (501)
T ss_dssp EEECCHHHHSCS-TTSCCBHHHHHHHH---SHHHHCTTCCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCHH
T ss_pred EEeChhhhcCCC-CCCCCchheeeccc---cCCccccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEEccccHH
Confidence 568899999 77 66899999854210 01111 1222334455 888888 9999999999999999999985
Q ss_pred cccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 87 IANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 87 ~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
.+.|.+. +.+++++++.++++|+.+.++||.++|+|+|+..++...+. ...|. +...+.|.++.+.+++|
T Consensus 102 -Ri~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~r~~~~~f~~ya~~~~~~ 174 (501)
T 1e4m_M 102 -RIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDE------YEGFLDPQIIDDFKDYADLCFEE 174 (501)
T ss_dssp -HHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHHH
T ss_pred -hhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHHHHh------cCCCCCchHHHHHHHHHHHHHHH
Confidence 4556552 57888999999999999999999999999988544321110 12366 78999999999999999
Q ss_pred hCCCCceeEEEeecCCCC
Q 019395 164 YANRPSLAAIELINEPLA 181 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~ 181 (341)
|+++ |..|.++|||..
T Consensus 175 ~gd~--V~~W~t~NEp~~ 190 (501)
T 1e4m_M 175 FGDS--VKYWLTINQLYS 190 (501)
T ss_dssp HTTT--CCEEEEESCTTH
T ss_pred hCCC--CCEEEEecCchh
Confidence 9986 666889999984
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=99.63 E-value=8.9e-17 Score=155.62 Aligned_cols=155 Identities=17% Similarity=0.269 Sum_probs=117.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.+ +.||+++.+.... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 50 G~AtaA~QiEGa~~edGkg~SiWD~f~~~~---p~~i~~~~~gd~A~----D~Y~~y--~eDi~lm~~lG~~~~R~sisW 120 (532)
T 2jf7_A 50 GAGGSAYQCEGAYNEGNRGPSIWDTFTQRS---PAKISDGSNGNQAI----NCYHMY--KEDIKIMKQTGLESYRFSISW 120 (532)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHC---GGGSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEecchHhhcCCcCCCCCcCeeeeEccccC---CCcccCCCCcchhh----hHHHHH--HHHHHHHHHcCCCeEeccccH
Confidence 568899999 99864 7899988542100 00111111234455 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+|+.-++...+. ...|. +...+.|.++.+.+++
T Consensus 121 s-Ri~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~r~~~~~f~~ya~~~~~ 193 (532)
T 2jf7_A 121 S-RVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLPQALEDE------YGGFLSHRIVDDFCEYAEFCFW 193 (532)
T ss_dssp H-HHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHH
T ss_pred H-HhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCHHHHhh------cCCCCCchHHHHHHHHHHHHHH
Confidence 5 4556553 57889999999999999999999999999888544321110 12366 7889999999999999
Q ss_pred HhCCCCceeEEEeecCCCC
Q 019395 163 RYANRPSLAAIELINEPLA 181 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~~ 181 (341)
||+++ |..|.++|||..
T Consensus 194 ~~gd~--V~~W~t~NEp~~ 210 (532)
T 2jf7_A 194 EFGDK--IKYWTTFNEPHT 210 (532)
T ss_dssp HHGGG--CSEEEEEECHHH
T ss_pred HhCCc--CceEEEccCchh
Confidence 99986 666889999973
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.8e-16 Score=151.88 Aligned_cols=153 Identities=17% Similarity=0.155 Sum_probs=115.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++.+... +-.....-..+.|. +||+.| ++|++.|+++|+|++|++|+|
T Consensus 16 G~AtaA~QiEGa~~edGkg~SiwD~~~~~----~~~~~~~~~~~~a~----D~Y~~y--~eDi~lm~~lG~~~~R~sisW 85 (473)
T 3ahy_A 16 GFATAAYQIEGAVDQDGRGPSIWDTFCAQ----PGKIADGSSGVTAC----DSYNRT--AEDIALLKSLGAKSYRFSISW 85 (473)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHHS----TTSSTTSCCSSSTT----CGGGCH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEecchhhhCCCcCCCCCcCeeeEEeecc----CCcccCCCCCcccc----chHHHH--HHHHHHHHHhCCCeEEccccH
Confidence 568999999 99855 789998854310 00011111233454 888888 999999999999999999988
Q ss_pred ccccCCCCC--CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc--hhHHHHHHHHHHHHH
Q 019395 86 WIANDPTPP--KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG--DSNVADTVAVIDFLA 161 (341)
Q Consensus 86 ~~~~~~~~~--~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~--~~~~~~~~~~~~~la 161 (341)
. .+.|.+. +.+++++++.++++|+.+.++||.++|+|+++.-++...+. ...|. +...+.|.++.+.++
T Consensus 86 s-Ri~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d~P~~L~~~------yggw~~~~~~~~~f~~ya~~~~ 158 (473)
T 3ahy_A 86 S-RIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLPEGLHQR------YGGLLNRTEFPLDFENYARVMF 158 (473)
T ss_dssp H-HHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGCTTHHHHHHHHHHHHHH
T ss_pred H-hhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCcCCHHHHhh------cCCCcCchhhHHHHHHHHHHHH
Confidence 5 4556553 57889999999999999999999999999988544321111 01253 578999999999999
Q ss_pred HHhCCCCceeEEEeecCCCC
Q 019395 162 ARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 162 ~~y~~~~~v~~~el~NEP~~ 181 (341)
++| ++ |..|.++|||..
T Consensus 159 ~~~-dr--V~~W~t~NEp~~ 175 (473)
T 3ahy_A 159 RAL-PK--VRNWITFNEPLC 175 (473)
T ss_dssp HHC-TT--CCEEEEEECHHH
T ss_pred HHh-Cc--CCEEEecCchhh
Confidence 999 65 666889999973
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-13 Score=134.67 Aligned_cols=221 Identities=15% Similarity=0.135 Sum_probs=132.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++|++.||++|+|+||+ | ..+|... -+++++.|.++||+||+++|....... ...+.
T Consensus 90 ~rDi~LmK~~GiN~VRv---y--~~~P~~~----------~d~~ldl~~~~GIyVIle~~~p~~~i~--------~~~P~ 146 (555)
T 2w61_A 90 LRDIPFLKMLGVNTLRV---Y--AIDPTKS----------HDICMEALSAEGMYVLLDLSEPDISIN--------RENPS 146 (555)
T ss_dssp HHHHHHHHHHTCSEEEE---C--CCCTTSC----------CHHHHHHHHHTTCEEEEESCBTTBSCC--------TTSCC
T ss_pred HHHHHHHHHcCCCEEEE---e--ccCCCCC----------hHHHHHHHHhcCCEEEEeCCCCCcccc--------cCCHH
Confidence 88999999999999999 2 2333221 168889999999999999886421111 01222
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---hHHHHHHHHHHHHHHHhcCCCc-eEEEeCCCCCCCh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---LDTLKSYYKAGYDAVRKYTSTA-YVIMSNRLGPADH 220 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~---~~~~~~~~~~~~~aIR~~~p~~-~v~~~~~~~~~~~ 220 (341)
| .+.+.+..+.+++||+++|+|++|.+.||+...... ...++...+++.+.||+.+++. +|-.... .....
T Consensus 147 ~----~~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~IpVgy~~a-d~~~~ 221 (555)
T 2w61_A 147 W----DVHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRKIPVGYSTN-DDAMT 221 (555)
T ss_dssp C----CHHHHHHHHHHHHHHTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCCCCEEEEEC-CCTTT
T ss_pred H----HHHHHHHHHHHHHHcCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCcceeecccc-ccchh
Confidence 4 345677899999999999999999999999863211 2346677778888888888653 3333321 11111
Q ss_pred -hhhhhccC--CCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHH
Q 019395 221 -KELLSFAS--GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDY 297 (341)
Q Consensus 221 -~~~~~~~~--~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~ 297 (341)
..+.++.. .....++.++.|..+... ... ......+. ..+ ...++||+++|||+.....+...+..
T Consensus 222 r~~la~yl~c~~~~~D~~~~N~Y~w~g~s--~f~-~sg~~~~~-------~~~-~~~~~Pi~vsEyG~~~~~pg~~~E~~ 290 (555)
T 2w61_A 222 RDNLARYFVCGDVKADFYGINMYEWCGYS--TYG-TSGYRERT-------KEF-EGYPIPVFFSEFGCNLVRPRPFTEVS 290 (555)
T ss_dssp HHHHHHHTTBTTCCCSCEEEEECCCCSSC--CHH-HHSHHHHH-------HHH-TTCSSCEEEEEECCCSSSSCCCTHHH
T ss_pred hHHHHHHhccCCCCcCEEEEeCCcccccc--ccc-chhHHHHH-------HHh-hCCCCCEEEEeCCCccCCCCchHHHH
Confidence 12223221 245568899999754311 000 00111111 111 22467899999999875333333333
Q ss_pred HHHHHHHHHHHccCCCcEEEeccccCCCCCC
Q 019395 298 QRFANAQLDVYGRATFGWAYWAHKCEANHWS 328 (341)
Q Consensus 298 ~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W~ 328 (341)
..|-+... ..-.|-+.|.|-.|...|.
T Consensus 291 a~y~~~m~----~~~sGG~Ife~~dE~nnyG 317 (555)
T 2w61_A 291 ALYGNKMS----SVWSGGLAYMYFEEENEYG 317 (555)
T ss_dssp HHTSHHHH----TTCCEEEESCSBCCTTCCC
T ss_pred HHHhhccc----ccccceEEEEEecccCCcc
Confidence 33322212 2334779999987754443
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.60 E-value=6.2e-14 Score=129.65 Aligned_cols=229 Identities=15% Similarity=0.191 Sum_probs=139.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCC-Cccc---chHHHHHHHHHHHHHcCCeEEEecCCC--CCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPK-PFVG---GSSKVLDNAFDWAEKYGVKVIVDLHAA--PGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~-~~~~---~~l~~ld~~i~~a~~~gi~vildlh~~--~g~~~~~~~~g~ 138 (341)
.+.|+.|++.|+|+|||.+.|+.. ++..+. .+.. ...+.+.++++.|+++||+|+|+.|-. +|.-.+......
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~-~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~ 134 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLME-HPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEK 134 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEES-STTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSB
T ss_pred HHHHHHHHHcCCCEEEEEeeecCC-CCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccC
Confidence 689999999999999998865422 222211 1111 268999999999999999999999965 332111000010
Q ss_pred C--CCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC
Q 019395 139 R--DGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR 214 (341)
Q Consensus 139 ~--~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~ 214 (341)
. .....|. -....+++.....++++. .|..|.+.||+..... -..++.++++.+|+++|. +|+....
T Consensus 135 ~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~----~V~~~~IGNE~~~~~~----~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 135 EHGPDLESWEAWFGSYSDMMAHYAHVAKRT----GCEMFCVGCEMTTAEP----HEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp SCCTTSSBHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEESCTTTTT----CHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHccCC----CceEEEECCCCCCCCc----hHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 0 1122333 111222233334445544 3677999999986322 345677789999999997 6666532
Q ss_pred CCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC----
Q 019395 215 LGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK---- 290 (341)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~---- 290 (341)
+.......+. ..-+|++++.|.++.. .+... ..+..+.+..++||+++|+|+.....
T Consensus 206 ~~~~~~~~lw-----~~~DvIgin~Y~~~~~------w~~~~--------~~l~~~~~~~~KPIiitE~G~~s~~g~~~~ 266 (343)
T 3civ_A 206 HGREEHVRFW-----DAVDLISSSAYYPIDR------WRDRV--------PVLREVAEAHEKPLFFMEVGCPSRSGSGAC 266 (343)
T ss_dssp TTCTTTCSCG-----GGSSEEEEECCCCGGG------HHHHH--------HHHHHHHHHHTCCEEEEEECCCSBTTGGGS
T ss_pred Cccccccccc-----ccCCEEEEeccCCchh------HHHHH--------HHHHHHHHHhCCCEEEEeeCCCCCCCCCCC
Confidence 2210101111 3456899999987521 11111 22333444447789999999864211
Q ss_pred --------CCCHHHHHHHHHHHHHHHccC--CCcEEEecccc
Q 019395 291 --------DASKQDYQRFANAQLDVYGRA--TFGWAYWAHKC 322 (341)
Q Consensus 291 --------~~~~~~~~~~~~~~~~~~~~~--~~Gw~~W~~k~ 322 (341)
..+.+...+|+++.++++++. ..|-+.|.|..
T Consensus 267 p~~~~~~~~~se~~Qa~~l~~~~~~~~~~~~~~G~~vW~w~~ 308 (343)
T 3civ_A 267 PWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPW 308 (343)
T ss_dssp TTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECS
T ss_pred CCcccCCCCCCHHHHHHHHHHHHHHHhcCCCccEEEEEEECC
Confidence 134567789999999998863 46888999875
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.4e-14 Score=140.82 Aligned_cols=119 Identities=17% Similarity=0.236 Sum_probs=88.9
Q ss_pred HhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCC---------
Q 019395 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS--------- 129 (341)
Q Consensus 59 ~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~--------- 129 (341)
|.....++|++.||++|+|+||+++..|..++|.++ .++ ++.||++|+.|+++||+|||.+++..-+
T Consensus 20 w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g-~~~---f~~ld~~i~~~~~~Gi~vil~~~~~~~P~Wl~~~~Pe 95 (675)
T 3tty_A 20 WDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEV-SYD---FTWLDDIIERLTKENIYLCLATSTGAHPAWMAKKYPD 95 (675)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSS-CBC---CHHHHHHHHHHHHTTCEEEEECCTTSCCHHHHHHCGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCC-ccC---HHHHHHHHHHHHHCCCEEEEeCCCCCCChhhhhcCCc
Confidence 333333999999999999999999844566777654 554 7899999999999999999998754211
Q ss_pred -----CCCCC-CCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 130 -----QNGNE-HSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 130 -----~~~~~-~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
.++.. ..|.+...+.-++.+.+.+.++++.|++||+++|.|++|++.|||..
T Consensus 96 ~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g~ 153 (675)
T 3tty_A 96 VLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYGG 153 (675)
T ss_dssp GBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCCC
T ss_pred eeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccCC
Confidence 01110 11222222222378899999999999999999999999999999984
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.6e-14 Score=136.95 Aligned_cols=260 Identities=15% Similarity=0.165 Sum_probs=143.8
Q ss_pred HHHHHHHHHhhccCHHHHHHH-HHCCCCEEEcCcccccccC---CCCC-CCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 51 APQVLQDHWDSYITDEDFKFL-SSNGINAVRIPVGWWIAND---PTPP-KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 51 ~~~~~~~~~~~~~~e~d~~~i-~~~G~N~VRlpi~~~~~~~---~~~~-~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
+...+...+ .+.++.+ +++||..||++--+...+. ..++ ..| .+..+|++|+.|.++||++++.|..
T Consensus 35 ~~~~l~~d~-----~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y---~~~~~D~~~d~~~~~G~~p~~~l~~ 106 (500)
T 4ekj_A 35 PGTLIREDS-----QAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVY---DWTKIDQLYDALLAKGIKPFIELGF 106 (500)
T ss_dssp HHHHTSHHH-----HHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEE---CCHHHHHHHHHHHHTTCEEEEEECC
T ss_pred chhhcChHH-----HHHHHHHHHhcCceEEEECCccccccceeecCCCCeec---chHHHHHHHHHHHHCCCEEEEEEeC
Confidence 444444444 5556555 5789999998532211110 0011 123 3889999999999999999999987
Q ss_pred CCCCCCCCC-----CCCCCCCccCCchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCC----CCChHHHHHHHHH
Q 019395 126 APGSQNGNE-----HSATRDGFQEWGDSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAP----GVALDTLKSYYKA 195 (341)
Q Consensus 126 ~~g~~~~~~-----~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~----~~~~~~~~~~~~~ 195 (341)
.|....... ..+.. ..+. .....+.+.++++.+++||+.. ..++.||++|||+.. ..+.+.+.++++.
T Consensus 107 ~P~~~~~~~~~~~~~~~~~-~~~~-~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~~l~~~ 184 (500)
T 4ekj_A 107 TPEAMKTSDQTIFYWKGNT-SHPK-LGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPNLDGFWEKADQAAYFELYDV 184 (500)
T ss_dssp BCGGGCSSCCEETTTTEEC-SCCC-HHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTTSTTTSGGGCHHHHHHHHHH
T ss_pred CchhhcCCCCccccccCCC-Cccc-HHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCCCccCCCCCCHHHHHHHHHH
Confidence 764322110 00000 0000 0122344456777788888653 357789999999863 2456789999999
Q ss_pred HHHHHHhcCCCceEEEeCCCCCCChhhhhhcc--CCCCcEEEEeeecCCCCcccc---------CccchhhhHHHHhhhh
Q 019395 196 GYDAVRKYTSTAYVIMSNRLGPADHKELLSFA--SGLSRVVIDVHYYNLFSNNFN---------GLNVQQNIDYVNNQRA 264 (341)
Q Consensus 196 ~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~---------~~~~~~~~~~~~~~~~ 264 (341)
++++||+++|+..|...+.-+......++... ....-.++++|.|........ ....+.....+... .
T Consensus 185 ~~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r 263 (500)
T 4ekj_A 185 TARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQDTKLSPSPDAVVGDVRRV-R 263 (500)
T ss_dssp HHHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTCCCSEEEEEEESEEEEEECTTSCEEEEECCSTTTTHHHHHHH-H
T ss_pred HHHHHHhhCCccccccCccCCccccHHHHHHHHhcCCccceEEeeccCCCCCCcccccccccccccCHHHHHHHHHHH-H
Confidence 99999999999887644211112223444321 234457899999953111000 01111112222211 1
Q ss_pred hhhhhhhccCCCceEEEeecCCCCCCCC--CHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 265 SDLGAVTTSNGPLTFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 265 ~~~~~~~~~~~~pv~vGE~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
+.+.. ....++|++++|||........ +......|+...+........+..+|+|..
T Consensus 264 ~~l~~-~~~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~~~~~~~~w~~~d 322 (500)
T 4ekj_A 264 EQIEA-SAFPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKGLVQAMSYWTYSD 322 (500)
T ss_dssp HHHHT-TTSTTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTTTCSEEEESCSBS
T ss_pred HHHHH-hCCCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhhhCceeeEEEEEe
Confidence 11111 1123568999999976532211 112334554444433334555788898864
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.4e-13 Score=134.17 Aligned_cols=204 Identities=13% Similarity=0.126 Sum_probs=138.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+.. + |. + ++++++|.++||+|+.++.... . . ..
T Consensus 321 ~~dl~l~k~~G~N~iR~~h-~-----p~-----~-------~~~~dlcDe~Gi~V~~E~~~~~-~------~----~~-- 369 (692)
T 3fn9_A 321 DFDLAAIMDVGATTVRFAH-Y-----QQ-----S-------DYLYSRCDTLGLIIWAEIPCVN-R------V----TG-- 369 (692)
T ss_dssp HHHHHHHHHHTCCEEEETT-S-----CC-----C-------HHHHHHHHHHTCEEEEECCCBS-C------C----CS--
T ss_pred HHHHHHHHHCCCCEEEecC-C-----CC-----c-------HHHHHHHHHCCCEEEEcccccC-C------C----CC--
Confidence 7899999999999999943 1 11 1 4789999999999999975321 0 0 01
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 224 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~ 224 (341)
+. .+.+.+.++.+++|++++|.|++|.+.||+.. ..+....+++++.+.+|+.||.++|..+..+.... ..
T Consensus 370 --~~-~~~~~~~~~~~v~r~rNHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~~~~--~~- 440 (692)
T 3fn9_A 370 --YE-TENAQSQLRELIRQSFNHPSIYVWGLHNEVYQ---PHEYTAALTRSLHDLAKTEDPDRYTVSVNGYGHMD--HP- 440 (692)
T ss_dssp --SC-HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCS---SHHHHHHHHHHHHHHHHHHCTTSEEEEEESSSCTT--CT-
T ss_pred --HH-HHHHHHHHHHHHHHhcCCCcceEEEeccccCc---ccccHHHHHHHHHHHHHHHCCCCCEEEeCCCcccc--cc-
Confidence 23 67778899999999999999999999999974 22556789999999999999999999885442111 10
Q ss_pred hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhc-cCCCceEEEeecCCCCC----------C--C
Q 019395 225 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTT-SNGPLTFVGEWTCEWNV----------K--D 291 (341)
Q Consensus 225 ~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pv~vGE~g~~~~~----------~--~ 291 (341)
....-.|+++|.|..|-.. ..+. +.. . +..+.+ ..++|++++|||+.... . +
T Consensus 441 ---~~~~~Dv~~~n~Y~gWY~~----~~~~-~~~---~----~~~~~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~~ 505 (692)
T 3fn9_A 441 ---VNLNADIQGMNRYFGWYEK----KIQD-IKP---W----VEQLEKDYPYQKLMLTEYGADANLAHQTEYLGDALNWG 505 (692)
T ss_dssp ---TCSSSSEEEEECCBTTTBS----CGGG-HHH---H----HHHHHHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCSS
T ss_pred ---ccccCCcccccccccccCC----chHH-HHH---H----HHHHHHHhcCccEEEEEEcCCccccccccccccccccc
Confidence 1223468999988643211 1111 111 1 111122 24678999999974210 0 0
Q ss_pred ---CCHHHHHHHHHHHHHHHcc--CCCcEEEeccccC
Q 019395 292 ---ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCE 323 (341)
Q Consensus 292 ---~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~ 323 (341)
.+.+....+++..++++++ .-+|-|.|++-.-
T Consensus 506 ~~~~see~Q~~~~~~~~~~~~~~p~~~G~fvW~~~D~ 542 (692)
T 3fn9_A 506 KPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDF 542 (692)
T ss_dssp SSCCBHHHHHHHHHHHHHHHHHCTTSCEEEESCSBCE
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEEEeeec
Confidence 2344445667777776664 5779999998754
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.8e-13 Score=133.16 Aligned_cols=210 Identities=14% Similarity=0.109 Sum_probs=135.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+.. .|. + ++++++|.++||+|+.+++..... ++.. + ...
T Consensus 307 ~~dl~~~k~~G~N~vR~~h------~p~-----~-------~~~~~~cD~~Gl~V~~e~~~~~~~--~~~~-~----~~~ 361 (667)
T 3cmg_A 307 EEDVALMREMGVNAIRLAH------YPQ-----A-------TYMYDLMDKHGIVTWAEIPFVGPG--GYAD-K----GFV 361 (667)
T ss_dssp HHHHHHHHHTTCCEEEETT------SCC-----C-------HHHHHHHHHHTCEEEEECCCBCCT--TSSS-C----SCC
T ss_pred HHHHHHHHHCCCCEEEecC------CCC-----C-------HHHHHHHHHCCCEEEEcccccCcC--cccc-c----ccc
Confidence 7899999999999999852 111 1 478899999999999998643110 0000 0 000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELL 224 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~ 224 (341)
-.+...+.+.+.++.+++|++++|.|++|.+.||+...+ +....+++++.+.||+.||+++|..+..+.. .+.
T Consensus 362 ~~~~~~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~~---~~~~~~~~~l~~~vk~~DptRpvt~~~~~~~----~~~ 434 (667)
T 3cmg_A 362 DQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEVG---DNPVEYVKELNALAKQEDPTRPTTSASNQDG----NLN 434 (667)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSSS---SCCHHHHHHHHHHHHHHCTTSCEEEEECCCS----GGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCEEEEEecccCCCccc---hhHHHHHHHHHHHHHHHCCCCcEEEeCCCCC----ccc
Confidence 114667788899999999999999999999999997421 2345788999999999999999988754321 111
Q ss_pred hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC---------CC-----
Q 019395 225 SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN---------VK----- 290 (341)
Q Consensus 225 ~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~---------~~----- 290 (341)
..-.++++|.|..+-.. ........+. .+ ..+..++|++++|||+... ..
T Consensus 435 -----~~~Dv~~~n~Y~~wy~~----~~~~~~~~~~-----~~--~~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~ 498 (667)
T 3cmg_A 435 -----FITENIAWNRYDGWYGS----TPKTLATFLD-----RT--HKKHPELRIGISEYGAGASIYHQQDSLKQPSASGW 498 (667)
T ss_dssp -----GSSSSEEEECCTTTSSS----CTHHHHHHHH-----HH--HHHCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSS
T ss_pred -----cccCEEEeccccccccC----chhhhHHHHH-----HH--HHHCCCCcEEEEEECCCCCcccccccccccccccc
Confidence 12347999999653111 1111111111 00 1123467899999997321 00
Q ss_pred CCCHHHHHHHHHHHHHHHcc--CCCcEEEecccc
Q 019395 291 DASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 322 (341)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~ 322 (341)
..+.+....+++.+++++.+ ..+|-|.|++-.
T Consensus 499 ~~~e~~q~~~~~~~~~~~~~~~~~~G~fvW~~~D 532 (667)
T 3cmg_A 499 WHPENWQTYYHMENWKIIAERPFVWGTFVWNMFD 532 (667)
T ss_dssp CCBHHHHHHHHHHHHHHHHTCTTCCCEEESCSBC
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Confidence 01234445566777776654 567999999873
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.45 E-value=5e-12 Score=115.23 Aligned_cols=224 Identities=12% Similarity=0.136 Sum_probs=141.5
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec---CCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 139 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~~~~~~g~~ 139 (341)
+.+++.+...+||.|++ .+.|. .++|.++ .|+ ++.+|++|++|+++||.|+... |.. ...+.
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW~-~~ep~~g-~~~---~~~~D~~v~~a~~~gi~v~gh~lvW~~~----~P~W~---- 92 (302)
T 1nq6_A 26 EAAYASTLDAQFGSVTPENEMKWD-AVESSRN-SFS---FSAADRIVSHAQSKGMKVRGHTLVWHSQ----LPGWV---- 92 (302)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEEEEEEESTT----CCTTT----
T ss_pred CHHHHHHHHhcCCeEEEcCceeec-cccCCCC-cCC---cHHHHHHHHHHHHCCCEEEEEecccCCC----CChhh----
Confidence 56778888899999999 67774 5666654 554 6889999999999999997432 321 11111
Q ss_pred CCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCCceE
Q 019395 140 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 140 ~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~v 209 (341)
..|. +...+.+.++++.+++||++ .|.+|+++|||..... ....+ ..+...+++++|+.+|+..+
T Consensus 93 ---~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~L 167 (302)
T 1nq6_A 93 ---SPLAATDLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKL 167 (302)
T ss_dssp ---TTSCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred ---hcCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCEE
Confidence 1133 56788899999999999998 6888999999986320 00112 24789999999999999888
Q ss_pred EEeCCCC-CCC--hhh---hhhc----cCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceE
Q 019395 210 IMSNRLG-PAD--HKE---LLSF----ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTF 279 (341)
Q Consensus 210 ~~~~~~~-~~~--~~~---~~~~----~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~ 279 (341)
++.+... ... ... +.+. ..+.+-+-++.|.+.... .++. +.. .+..++ ..+.||+
T Consensus 168 ~~Ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~------~~~~-~~~-------~l~~~a-~~g~pi~ 232 (302)
T 1nq6_A 168 CYNDYNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSD-FQA-------NLQRFA-DLGVDVQ 232 (302)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT-HHH-------HHHHHH-TTTCEEE
T ss_pred EecccccccCchHHHHHHHHHHHHHHCCCCcceEEEEEeecCCCC------CHHH-HHH-------HHHHHH-hcCCcEE
Confidence 8864211 001 111 2111 112344556668773210 1111 111 122223 2367899
Q ss_pred EEeecCCCCCCCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCC
Q 019395 280 VGEWTCEWNVKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 327 (341)
Q Consensus 280 vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W 327 (341)
|+|+|... +.+...++++..+.++.+ ...|.++|++... ..|
T Consensus 233 iTE~di~~-----~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~-~sW 276 (302)
T 1nq6_A 233 ITELDIEG-----SGSAQAANYTKVVNACLAVTRCTGITVWGVTDK-YSW 276 (302)
T ss_dssp EEEEEECC-----CHHHHHHHHHHHHHHHHTSTTEEEEEESCSCGG-GCT
T ss_pred EeeCCCCC-----chHHHHHHHHHHHHHHHhCCCceEEEEEcCCCC-CCc
Confidence 99999763 234455666776666554 4579999998642 445
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.6e-12 Score=117.86 Aligned_cols=224 Identities=16% Similarity=0.235 Sum_probs=142.2
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe-c--CCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAAPGSQNGNEHSATR 139 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild-l--h~~~g~~~~~~~~g~~ 139 (341)
+.+++.|...+||.||+ .+.|. ..+|.++ .|+ +..+|+++++|+++||.|... | |..
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW~-~~ep~~g-~~~---~~~~D~~~~~a~~~gi~v~ghtl~W~~~------------- 87 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKWD-ATEPSQN-SFS---FGAGDRVASYAADTGKELYGHTLVWHSQ------------- 87 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEEEEEEESSS-------------
T ss_pred CHHHHHHHHhcCCEEEECCcccHH-HhCCCCC-cCC---hHHHHHHHHHHHHCCCEEEEEeeecCCC-------------
Confidence 56788888899999999 67774 5666553 554 688999999999999998653 2 321
Q ss_pred CCccCC----c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CChHHH-----HHHHHHHHHHHHhcCCC
Q 019395 140 DGFQEW----G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VALDTL-----KSYYKAGYDAVRKYTST 206 (341)
Q Consensus 140 ~~~~~w----~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~~~~~-----~~~~~~~~~aIR~~~p~ 206 (341)
.+.| . +...+...++++.+++||++. |.+|++.|||.... .....| ..|+..+++++|+.+|+
T Consensus 88 --~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~ 163 (315)
T 3cui_A 88 --LPDWAKNLNGSAFESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPT 163 (315)
T ss_dssp --CCHHHHTCCHHHHHHHHHHHHHHHHHHHTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSS
T ss_pred --CCHHHhcCCHHHHHHHHHHHHHHHHHHcCCc--eEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCC
Confidence 1224 2 567788899999999999984 88899999998632 000112 46888999999999999
Q ss_pred ceEEEeCCC-CCCC--h---hhhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCC
Q 019395 207 AYVIMSNRL-GPAD--H---KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP 276 (341)
Q Consensus 207 ~~v~~~~~~-~~~~--~---~~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (341)
..|++.+-. .... . ..+.+ ...+.+-+-++.|..... .++ .+ . ..+..+++ .+.
T Consensus 164 a~l~~ndy~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-------~~~-~~---~----~~l~~~a~-~g~ 227 (315)
T 3cui_A 164 AKLCINDYNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQ-------VPG-DF---R----QNLQRFAD-LGV 227 (315)
T ss_dssp SEEEEEESSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTC-------CCT-TH---H----HHHHHHHT-TTC
T ss_pred CEEEECCccccCcchHHHHHHHHHHHHHHCCCcccEEEeeeecCCCC-------CHH-HH---H----HHHHHHHh-cCC
Confidence 999886421 1111 1 11211 112234455555654321 111 11 1 12233343 367
Q ss_pred ceEEEeecCCCCC--CCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCC
Q 019395 277 LTFVGEWTCEWNV--KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 327 (341)
Q Consensus 277 pv~vGE~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W 327 (341)
||+|+|++..... +..+.+...++++..+.++.+ ...|.++|++... ..|
T Consensus 228 pv~iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~-~sW 281 (315)
T 3cui_A 228 DVRITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDK-YSW 281 (315)
T ss_dssp EEEEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBTT-TCS
T ss_pred ceEEEecccccCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEEEeCCCC-Ccc
Confidence 8999999976321 111223455677777766544 3578999998643 445
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-11 Score=114.45 Aligned_cols=233 Identities=13% Similarity=0.180 Sum_probs=143.0
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec---CCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNGNEHSATR 139 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~~~~~~g~~ 139 (341)
+.++..|...+||.|++ .+.|. ..+|.++ .|+ +..+|++|++|+++||.|+... |.. ...+...
T Consensus 52 ~~~~~~~~~~~fn~vt~en~~kW~-~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~ghtlvW~~q----~P~W~~~-- 120 (347)
T 1xyz_A 52 DPTYNSILQREFSMVVCENEMKFD-ALQPRQN-VFD---FSKGDQLLAFAERNGMQMRGHTLIWHNQ----NPSWLTN-- 120 (347)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECSSS----CCHHHHT--
T ss_pred hHHHHHHHHhcCCEEEECCcccHH-HhcCCCC-cCC---hHHHHHHHHHHHHCCCEEEEEeeecccc----CcHHHhc--
Confidence 36788888899999999 77774 5566553 554 6889999999999999987432 321 1000000
Q ss_pred CCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CChHHH-----HHHHHHHHHHHHhcCCCceEE
Q 019395 140 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VALDTL-----KSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 140 ~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~~~~~-----~~~~~~~~~aIR~~~p~~~v~ 210 (341)
..+. +...+++.++++.+++||+++ |.+|+++|||.... .....| ..|+..+++++|+.+|+..++
T Consensus 121 ---~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~ 195 (347)
T 1xyz_A 121 ---GNWNRDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLF 195 (347)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhCCe--eEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEEE
Confidence 0123 567888999999999999985 88899999998632 111122 368899999999999999988
Q ss_pred EeCCCCCC-C--h---hhhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEE
Q 019395 211 MSNRLGPA-D--H---KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 280 (341)
Q Consensus 211 ~~~~~~~~-~--~---~~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~v 280 (341)
+.+..... . . ..+.+ ...+.+-+-++.|....+. .. .++.+.. .+..+++. |.||+|
T Consensus 196 ~Ndyn~~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~~-------~~-~~~~~~~----~l~~~a~~-G~pi~i 262 (347)
T 1xyz_A 196 YNDYNIEDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGMS-------PE-YLASIDQ----NIKRYAEI-GVIVSF 262 (347)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCC-------HH-HHHHHHH----HHHHHHHT-TCEEEE
T ss_pred eccCccccccchHHHHHHHHHHHHHCCCCcceEEEeeecCCCCC-------ch-hHHHHHH----HHHHHHhc-CCceEE
Confidence 87532111 1 1 11221 1112233445557653211 11 0122222 23334433 678999
Q ss_pred EeecCCCCCCCCC---HHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCC
Q 019395 281 GEWTCEWNVKDAS---KQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 327 (341)
Q Consensus 281 GE~g~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W 327 (341)
+|++......... .+...+++++.+.++.+ ...|-++|.+... ..|
T Consensus 263 TEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~~~v~git~Wg~~D~-~sW 313 (347)
T 1xyz_A 263 TEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTDK-YTW 313 (347)
T ss_dssp EEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBTT-SCS
T ss_pred EeccccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCccC-Ccc
Confidence 9999764211111 23445666776666544 4589999998643 445
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.34 E-value=5.8e-11 Score=107.97 Aligned_cols=221 Identities=15% Similarity=0.243 Sum_probs=135.6
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCc
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
+.+.+.| ..+||.|++ .+.|. ..+|.++ .|+ ++.+|++|++|+++||.|....-... +| .
T Consensus 29 ~~~~~~~-~~~fn~vt~en~~kW~-~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~ghtlvW~-~q-----------~ 90 (303)
T 1ta3_B 29 SQNEAIV-ASQFGVITPENSMKWD-ALEPSQG-NFG---WSGADYLVDYATQHNKKVRGHTLVWH-SQ-----------L 90 (303)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECS-SS-----------C
T ss_pred HHHHHHH-HhhCCEEEECccccHH-HhCCCCC-ccC---chHHHHHHHHHHHCCCEEEEeecccc-CC-----------C
Confidence 3455555 679999999 67774 5566553 453 68899999999999999875432110 11 1
Q ss_pred cCCc------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC--CChHHH-----HHHHHHHHHHHHhcCCCceE
Q 019395 143 QEWG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG--VALDTL-----KSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 143 ~~w~------~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~--~~~~~~-----~~~~~~~~~aIR~~~p~~~v 209 (341)
+.|. +...+...++++.+++||+++ |.+||+.|||.... .....| ..|+..+++++|+.+|+..+
T Consensus 91 P~W~~~~~~~~~~~~~~~~~i~~v~~rY~g~--v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L 168 (303)
T 1ta3_B 91 PSWVSSIGDANTLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKL 168 (303)
T ss_dssp CHHHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEE
T ss_pred ChhhhcCCCHHHHHHHHHHHHHHHHHhcCCc--ceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHCCCCEE
Confidence 2242 245678889999999999985 88899999997521 000111 36889999999999999999
Q ss_pred EEeCCC-CCCC---h---hhhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCC-c
Q 019395 210 IMSNRL-GPAD---H---KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP-L 277 (341)
Q Consensus 210 ~~~~~~-~~~~---~---~~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p 277 (341)
++.+-. .... . ..+.+ ...+-+-+-++.|......+ .+ .+.. .+..+++. |. |
T Consensus 169 ~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~~------~~----~~~~----~l~~~a~~-G~~p 233 (303)
T 1ta3_B 169 YINDYNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHWS------ST----EAAG----ALSSLANT-GVSE 233 (303)
T ss_dssp EEEESCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCCC------GG----GHHH----HHHHHHTT-CCSE
T ss_pred EeccccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCCC------HH----HHHH----HHHHHHHC-CCCe
Confidence 987521 1111 1 11222 11223455566687643210 11 1111 22223333 66 8
Q ss_pred eEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCCCCC
Q 019395 278 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 327 (341)
Q Consensus 278 v~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W 327 (341)
|+|+|++... ...+.+.++++..++. ....|-++|.+... ..|
T Consensus 234 i~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~-~sW 276 (303)
T 1ta3_B 234 VAITELDIAG----AASSDYLNLLNACLNE--QKCVGITVWGVSDK-DSW 276 (303)
T ss_dssp EEEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBGG-GST
T ss_pred EEEeeCCcCh----hHHHHHHHHHHHHHhC--CCceEEEEecCCcC-CCc
Confidence 9999999752 2344555555443321 24578999987632 345
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-10 Score=105.08 Aligned_cols=217 Identities=17% Similarity=0.235 Sum_probs=135.8
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDG 141 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~~g~~~~ 141 (341)
+.+++.|...+||.|++ .+.|. .++|.++ .|+ +..+|++|++|+++||.|.. |..- .+|
T Consensus 27 ~~~~~~~~~~~fn~vt~eN~~kW~-~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~g--htlvW~~q----------- 88 (313)
T 1v0l_A 27 DSTYTSIAGREFNMVTAENEMKID-ATEPQRG-QFN---FSSADRVYNWAVQNGKQVRG--HTLAWHSQ----------- 88 (313)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEE--EEEECSSS-----------
T ss_pred CHHHHHHHHhcCCEEEECCcccHH-HhCCCCC-ccC---chHHHHHHHHHHHCCCEEEE--EeecCcCc-----------
Confidence 46778888899999999 57764 5566553 443 68899999999999999754 2210 011
Q ss_pred ccCCc-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hHHH----HHHHHHHHHHHHhcCCCce
Q 019395 142 FQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL----KSYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 142 ~~~w~-----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~----~~~~----~~~~~~~~~aIR~~~p~~~ 208 (341)
.+.|. +...+...++++.+++||+++ |..|++.|||.....+ ...+ ..|+..++++.|+.+|+..
T Consensus 89 ~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g~--i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~a~ 166 (313)
T 1v0l_A 89 QPGWMQSLSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAK 166 (313)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSE
T ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHHcCCc--ceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhhCCCCE
Confidence 12343 456778889999999999974 7889999999853211 1112 4588999999999999999
Q ss_pred EEEeCCCC-CCC---hh---hhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCc
Q 019395 209 VIMSNRLG-PAD---HK---ELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 277 (341)
Q Consensus 209 v~~~~~~~-~~~---~~---~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 277 (341)
+++.+-.. ... .. .+.+ ...+-+-+-++.|....+. ..+. +.. .+..+++ .+.|
T Consensus 167 L~~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~------~~~~----~~~----~l~~~a~-~G~p 231 (313)
T 1v0l_A 167 LCYNDYNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN----FRT----TLQNFAA-LGVD 231 (313)
T ss_dssp EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HHH----HHHHHHT-TTCE
T ss_pred EEEeccccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCC------CHHH----HHH----HHHHHHh-cCCe
Confidence 99875211 101 01 1211 1123345556668643211 1111 111 2222333 3678
Q ss_pred eEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 278 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 278 v~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
|+|+|++... ...+.+.++++..++ .....|-++|.+..
T Consensus 232 v~iTEldi~~----~qa~~y~~~~~~~~~--~~~v~git~Wg~~D 270 (313)
T 1v0l_A 232 VAITELDIQG----APASTYANVTNDCLA--VSRCLGITVWGVRD 270 (313)
T ss_dssp EEEEEEEETT----CCHHHHHHHHHHHHT--CTTEEEEEESCSBG
T ss_pred EEEEeCCccH----HHHHHHHHHHHHHHh--cCCceEEEEECCCC
Confidence 9999999752 234555555554433 12557899998764
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-10 Score=106.27 Aligned_cols=218 Identities=18% Similarity=0.271 Sum_probs=134.0
Q ss_pred HHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 66 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
.+.+.| ..+||.|++ .+.| ...+|.++ .|+ +..+|++|++|+++||.|....-... +| .|
T Consensus 31 ~~~~~~-~~~fn~vt~en~~kW-~~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~ghtl~W~-~q-----------~P 92 (303)
T 1i1w_A 31 KNAAII-QANFGQVTPENSMKW-DATEPSQG-NFN---FAGADYLVNWAQQNGKLIRGHTLVWH-SQ-----------LP 92 (303)
T ss_dssp THHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEEEEEECS-TT-----------CC
T ss_pred HHHHHH-HhhCCEEEECccccH-HHhCCCCC-ccC---hhhHHHHHHHHHHCCCEEEEeecccc-CC-----------CC
Confidence 344555 779999999 6666 45666553 554 68899999999999999864321110 11 12
Q ss_pred CCc------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC--CChHHH-----HHHHHHHHHHHHhcCCCceEE
Q 019395 144 EWG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG--VALDTL-----KSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 144 ~w~------~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~--~~~~~~-----~~~~~~~~~aIR~~~p~~~v~ 210 (341)
.|. +...+...++++.+++||+++ |.+|++.|||.... .....| ..|+..+++++|+.+|+..++
T Consensus 93 ~W~~~~~~~~~~~~~~~~~i~~v~~ry~g~--v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~L~ 170 (303)
T 1i1w_A 93 SWVSSITDKNTLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLY 170 (303)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEE
T ss_pred hHHhcCCCHHHHHHHHHHHHHHHHHhcCCc--eeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCeEE
Confidence 343 245678889999999999985 88899999997521 101112 357899999999999999999
Q ss_pred EeCCC-CCCC---hhh---hhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCC-ce
Q 019395 211 MSNRL-GPAD---HKE---LLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGP-LT 278 (341)
Q Consensus 211 ~~~~~-~~~~---~~~---~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pv 278 (341)
+.+.. .... ... +.+ ...+.+-+-++.|..... + +.+.. .+..+++. |. ||
T Consensus 171 ~Ndyn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~--------~----~~~~~----~l~~~a~~-G~~pi 233 (303)
T 1i1w_A 171 INDYNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQ--------G----ASVLQ----ALPLLASA-GTPEV 233 (303)
T ss_dssp EEESSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTT--------H----HHHHH----HHHHHHTT-CCSEE
T ss_pred eccccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCCC--------H----HHHHH----HHHHHHHC-CCCeE
Confidence 87421 1111 011 222 111234444555754321 1 22221 22333433 66 89
Q ss_pred EEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCCCCC
Q 019395 279 FVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHW 327 (341)
Q Consensus 279 ~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W 327 (341)
+|+|++... ...+.+.++++..++. ....|-++|.+... ..|
T Consensus 234 ~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~-~sW 275 (303)
T 1i1w_A 234 AITELDVAG----ASSTDYVNVVNACLNV--SSCVGITVWGVADP-DSW 275 (303)
T ss_dssp EEEEEEETT----CCHHHHHHHHHHHHHC--TTEEEEEESCSBGG-GST
T ss_pred EEEeCCccc----hHHHHHHHHHHHHHhC--CCceEEEEEcCCCC-CCc
Confidence 999999753 2445566665544431 35679999987643 445
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.1e-10 Score=119.71 Aligned_cols=119 Identities=22% Similarity=0.173 Sum_probs=86.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+.. + | . -+++++.|.++||+|+.++-.... ++.. +.......
T Consensus 352 ~~dl~lmK~~G~N~VR~~h-y-----p--~----------~~~fydlcDe~Gi~V~~E~~~~~~---g~~~-~~w~~~~~ 409 (1024)
T 1yq2_A 352 REDLALMKRFNVNAIRTSH-Y-----P--P----------HPRLLDLADEMGFWVILECDLETH---GFEA-GGWVENPS 409 (1024)
T ss_dssp HHHHHHHHHTTCCEEEETT-S-----C--C----------CHHHHHHHHHHTCEEEEECSCBCG---GGTT-TTTTTCGG
T ss_pred HHHHHHHHHcCCCEEEecC-C-----C--C----------CHHHHHHHHHCCCEEEEcCCcccC---Cccc-ccccccCC
Confidence 7899999999999999852 1 1 1 147889999999999998721100 0000 00000000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
-.+...+.+.+.++.+++|++++|.|++|.+.||+... ...+++++.||+.||.++|...+
T Consensus 410 ~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 410 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 01456778889999999999999999999999999741 34678899999999999998754
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.6e-10 Score=109.13 Aligned_cols=216 Identities=16% Similarity=0.217 Sum_probs=134.6
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDG 141 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~~g~~~~ 141 (341)
+.+++.|...+||.|++ .+.|. .++|.++ .|+ +..+|++|++|+++||.|.. |..- .+|
T Consensus 27 ~~~~~~~~~~~fn~~t~en~~kw~-~~ep~~g-~~~---f~~~D~~~~~a~~~gi~v~g--htlvW~~q----------- 88 (436)
T 2d1z_A 27 DSAYTTIASREFNMVTAENEMKID-ATEPQRG-QFN---FSAGDRVYNWAVQNGKQVRG--HTLAWHSQ----------- 88 (436)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEE--EEEECSTT-----------
T ss_pred CHHHHHHHHHhCCeeeeccccccc-cccCCCC-ccC---hHHHHHHHHHHHHCCCEEEE--EEEEeCCC-----------
Confidence 46788888899999999 57764 5566553 453 68899999999999999754 3220 011
Q ss_pred ccCCc-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-------ChHHH-HHHHHHHHHHHHhcCCCce
Q 019395 142 FQEWG-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-------ALDTL-KSYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 142 ~~~w~-----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~-------~~~~~-~~~~~~~~~aIR~~~p~~~ 208 (341)
.|.|. +...+.+.++++.+++||++ .|..|++.|||....- ....+ ..|++.+++++|+.+|+..
T Consensus 89 ~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~dP~a~ 166 (436)
T 2d1z_A 89 QPGWMQSLSGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPAAK 166 (436)
T ss_dssp CCHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHHCTTSE
T ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhhCCCCE
Confidence 12343 45678888999999999997 6778999999975321 11122 4789999999999999999
Q ss_pred EEEeCCCCCC-C---h-------hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCc
Q 019395 209 VIMSNRLGPA-D---H-------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPL 277 (341)
Q Consensus 209 v~~~~~~~~~-~---~-------~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 277 (341)
|++.+..... . . ..+.....+.+-+-++.|+...+. ..+. +.. .+..+++ .+.|
T Consensus 167 l~~Ndyn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~------~~~~----~~~----~l~~~a~-~g~~ 231 (436)
T 2d1z_A 167 LCYNDYNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN----FRT----TLQNFAA-LGVD 231 (436)
T ss_dssp EEEEESSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HHH----HHHHHHT-TTCE
T ss_pred EEEeccccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCCC------CHHH----HHH----HHHHHHH-cCCe
Confidence 9886421111 1 0 111111123344555557542110 1111 111 2222333 3678
Q ss_pred eEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 278 TFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 278 v~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
|+|+|++... ...+.+.++++..++ .....|-++|.+.
T Consensus 232 v~iTEldv~~----~qa~~y~~~~~~~~~--~~~~~gvt~Wg~~ 269 (436)
T 2d1z_A 232 VAITELDIQG----ASSSTYAAVTNDCLA--VSRCLGITVWGVR 269 (436)
T ss_dssp EEEEEEEETT----CCHHHHHHHHHHHHT--CTTEEEEEESCSB
T ss_pred EEEeecchhH----HHHHHHHHHHHHHHh--cCCceEEEecccc
Confidence 9999999752 244555555554432 1245789999875
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.24 E-value=3e-10 Score=118.53 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=85.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCCCCCCcc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g~~~~~~ 143 (341)
++||+.||++|+|+||++. + | .. +++++.|.++||+|+.++... .|. .+ .......
T Consensus 373 ~~dl~lmK~~g~N~vR~~h-y-----p--~~----------~~~~dlcDe~Gi~V~~E~~~~~~g~-~~---~~~~~~~- 429 (1023)
T 1jz7_A 373 VQDILLMKQNNFNAVRCSH-Y-----P--NH----------PLWYTLCDRYGLYVVDEANIETHGM-VP---MNRLTDD- 429 (1023)
T ss_dssp HHHHHHHHHTTCCEEECTT-S-----C--CC----------HHHHHHHHHHTCEEEEECSCBCTTS-SS---TTTTTTC-
T ss_pred HHHHHHHHHcCCCEEEecC-C-----C--CC----------HHHHHHHHHCCCEEEECCCcccCCc-cc---cCcCCCC-
Confidence 7899999999999999852 1 1 11 268899999999999987321 111 00 0000011
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+...+.+.+.++.+++|++++|.|++|.+.||+... ...+++++.||+.||+++|..+.
T Consensus 430 ---p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 430 ---PRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCCEEEEEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecC
Confidence 456778889999999999999999999999999741 24668899999999999998764
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.2e-11 Score=118.93 Aligned_cols=137 Identities=17% Similarity=0.194 Sum_probs=102.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++|++.||++|+|+||+.+.| ...+|.++ .|+-+.++.++++++.|+++||+||+.+.-+- ++.+.+| +.+.
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~W-~~hEP~~G-~ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi---~~ew~~g---G~P~ 111 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVFW-NFHEPEEG-RYDFAGQKDIAAFCRLAQENGMYVIVRPGPYV---CAEWEMG---GLPW 111 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECCH-HHHCSSTT-CCCCSGGGCHHHHHHHHHHTTCEEEEECCSCC---CTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEcChH-HhcCCCCC-ccChhHHHHHHHHHHHHHHCCCEEEEecCccc---ccccccC---CCch
Confidence 999999999999999999985 67777664 78888899999999999999999999864221 1111111 1122
Q ss_pred Cc------------hhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC-CC
Q 019395 145 WG------------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYT-ST 206 (341)
Q Consensus 145 w~------------~~~~~~~~~~~~~la~~y~~-----~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~-p~ 206 (341)
|. +...+.+.++++.|++|+++ +|.|++|+|-||+..-+. -+.+.+.+.+.+|+.+ ++
T Consensus 112 Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~----~~~y~~~l~~~l~~~g~~~ 187 (612)
T 3d3a_A 112 WLLKKKDIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGI----DKPYISEIRDMVKQAGFTG 187 (612)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCC----CHHHHHHHHHHHHHHTCCS
T ss_pred hhccCCCceecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCc----hHHHHHHHHHHHHHcCCCc
Confidence 21 56778888999999999995 899999999999963111 2356677778888887 57
Q ss_pred ceEEEeC
Q 019395 207 AYVIMSN 213 (341)
Q Consensus 207 ~~v~~~~ 213 (341)
.+++..+
T Consensus 188 vp~~~~~ 194 (612)
T 3d3a_A 188 VPLFQCD 194 (612)
T ss_dssp SCEEEEE
T ss_pred hhheecc
Confidence 7666553
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-10 Score=105.02 Aligned_cols=233 Identities=12% Similarity=0.104 Sum_probs=137.9
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec---CC-CCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HA-APGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl---h~-~~g~~~~~~~~g~ 138 (341)
.++.+.| ..+||.|++ .+.| ..++|.++ .|+ +..+|++|++|+++||.|.... |. .|..... +..|.
T Consensus 29 ~~~~~l~-~~~fn~vt~en~~kW-~~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g~ 101 (356)
T 2dep_A 29 GQIAELY-KKHVNMLVAENAMKP-ASLQPTEG-NFQ---WADADRIVQFAKENGMELRFHTLVWHNQTPDWFFL-DKEGK 101 (356)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCEEEECCcccH-HHhcCCCC-ccC---chHHHHHHHHHHHCCCEEEEeeccccccCchhhhc-cCcCC
Confidence 4556666 689999999 6666 45666553 554 6899999999999999987532 42 2221110 00111
Q ss_pred CC------CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChHHH-----HHHHHHHHHHHHh
Q 019395 139 RD------GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRK 202 (341)
Q Consensus 139 ~~------~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~ 202 (341)
+. ...... +...++..++++.+++||++ .|..|+++|||..... ....| ..|+..+++++|+
T Consensus 102 ~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~ 179 (356)
T 2dep_A 102 PMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRATRE 179 (356)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCccCChHHHhccHHHHHHHHHHHHH
Confidence 00 000112 45667888999999999998 6888999999985320 00112 3688999999999
Q ss_pred -cCCCceEEEeCCCCCCCh------hhhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhh
Q 019395 203 -YTSTAYVIMSNRLGPADH------KELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 271 (341)
Q Consensus 203 -~~p~~~v~~~~~~~~~~~------~~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
.+|+..+++.+-.. ... ..+.+ ...+.+-+-+..|....+ .+ ++.+.. .+..++
T Consensus 180 ~~dP~a~L~~Ndyn~-~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~----~~~~~~----~l~~~a 244 (356)
T 2dep_A 180 AGGSDIKLYINDYNT-DDPVKRDILYELVKNLLEKGVPIDGVGHQTHIDIYN------PP----VERIIE----SIKKFA 244 (356)
T ss_dssp HHCSSSEEEEEESCT-TSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SC----HHHHHH----HHHHHH
T ss_pred hcCCCcEEEeccccc-cCcchHHHHHHHHHHHHHCCCCccEEEeeeeecCCC------CC----HHHHHH----HHHHHH
Confidence 99999999875211 111 11221 111233444555754211 01 122222 222333
Q ss_pred ccCCCceEEEeecCCCCCC--------CCC---HHHHHHHHHHHHHHHcc---CCCcEEEecccc
Q 019395 272 TSNGPLTFVGEWTCEWNVK--------DAS---KQDYQRFANAQLDVYGR---ATFGWAYWAHKC 322 (341)
Q Consensus 272 ~~~~~pv~vGE~g~~~~~~--------~~~---~~~~~~~~~~~~~~~~~---~~~Gw~~W~~k~ 322 (341)
. .|.||+|+|++...... ..+ .+...++++..+.++.+ ...|-++|.+..
T Consensus 245 ~-~Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~gvt~Wg~~D 308 (356)
T 2dep_A 245 G-LGLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKENKDIVSAVVFWGISD 308 (356)
T ss_dssp T-TTCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTTGGGEEEEEESCSBT
T ss_pred h-CCCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEecCcc
Confidence 3 36789999998754211 112 23345566666666654 345899998864
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.22 E-value=2.9e-11 Score=117.37 Aligned_cols=114 Identities=16% Similarity=0.250 Sum_probs=85.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEE--EecCCCCCCCCCCC--------
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI--VDLHAAPGSQNGNE-------- 134 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi--ldlh~~~g~~~~~~-------- 134 (341)
++|++.||++|+|+||++| +|...+|..++.|+ ++.+|++|+.|+++||+|| |++|...|......
T Consensus 32 ~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~yd---f~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~WL 107 (516)
T 1vem_A 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSWV 107 (516)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGGG
T ss_pred HHHHHHHHHcCCCEEEEec-chhhccCCCCCccc---hHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCCCCCCCHHH
Confidence 9999999999999999999 55677787335776 7889999999999999999 99985543211000
Q ss_pred -------------CCCCCC--CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeE----------------EEeecCCCCC
Q 019395 135 -------------HSATRD--GFQEWG-DSNVADTVAVIDFLAARYANRPSLAA----------------IELINEPLAP 182 (341)
Q Consensus 135 -------------~~g~~~--~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~----------------~el~NEP~~~ 182 (341)
..|.+. ....|. ....+.+.++++.|++||++++.|++ |++-||...+
T Consensus 108 ~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~~ 187 (516)
T 1vem_A 108 WNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGYP 187 (516)
T ss_dssp GGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCTT
T ss_pred HhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHHHccCCCEEEEeeccccccccccccccccccCcCCC
Confidence 111110 001133 45678899999999999999999998 9999997543
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=99.20 E-value=7.9e-10 Score=101.83 Aligned_cols=229 Identities=11% Similarity=0.128 Sum_probs=136.7
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe-c--CCC-CCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAA-PGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild-l--h~~-~g~~~~~~~~g~ 138 (341)
+++.+.+ ..+||.|++ .+.|. .++|.++ .|+ +..+|++|++|+++||.|... | |.. |+.... +..|
T Consensus 28 ~~~~~~~-~~~fn~vt~eN~~kW~-~~ep~~g-~~~---f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g- 99 (331)
T 1n82_A 28 EMQKQLL-IDHVNSITAENHMKFE-HLQPEEG-KFT---FQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQ-DGQG- 99 (331)
T ss_dssp HHTHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CSSS-
T ss_pred HHHHHHH-HhcCCEEEECCcccHH-HhCCCCC-ccC---hHHHHHHHHHHHHCCCEEEEEeeecCCCCChhhcc-CCCC-
Confidence 3455666 569999999 67764 5666553 554 688999999999999998753 2 432 221110 0111
Q ss_pred CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCCce
Q 019395 139 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTL-----KSYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 139 ~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~ 208 (341)
. ... +...+...++++.+++||++ .|.+|++.|||....- ....| ..|+..+++++|+.+|+..
T Consensus 100 ---~-~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~ 173 (331)
T 1n82_A 100 ---H-FVSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDAL 173 (331)
T ss_dssp ---S-BCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSE
T ss_pred ---C-CCCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHHHHCCCCE
Confidence 1 123 46778889999999999999 6888999999985321 11111 3588999999999999999
Q ss_pred EEEeCCCCCCCh---h---hhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCce
Q 019395 209 VIMSNRLGPADH---K---ELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 278 (341)
Q Consensus 209 v~~~~~~~~~~~---~---~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv 278 (341)
+++.+-. .... . .+.. ...+-+-+-++.|.-..+ .+ .+.+.. .+..++.. |.||
T Consensus 174 L~~Ndyn-~~~~~k~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------~~----~~~~~~----~l~~~a~~-G~pi 237 (331)
T 1n82_A 174 LFYNDYN-ECFPEKREKIFALVKSLRDKGIPIHGIGMQAHWSLTR------PS----LDEIRA----AIERYASL-GVVL 237 (331)
T ss_dssp EEEEESS-TTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSS------SC----HHHHHH----HHHHHHTT-TCEE
T ss_pred EEEeccc-CCCchhHHHHHHHHHHHHHCCCccceEEeceecCCCC------CC----HHHHHH----HHHHHHhc-CCeE
Confidence 9886521 1111 1 1111 111234444555752111 01 122221 22233333 6789
Q ss_pred EEEeecCCCCCC--------CCC---HHHHHHHHHHHHHHHcc-CC-Cc-EEEeccccC
Q 019395 279 FVGEWTCEWNVK--------DAS---KQDYQRFANAQLDVYGR-AT-FG-WAYWAHKCE 323 (341)
Q Consensus 279 ~vGE~g~~~~~~--------~~~---~~~~~~~~~~~~~~~~~-~~-~G-w~~W~~k~~ 323 (341)
+|+|++...... ..+ .+....+++..+.++.+ .. ++ -++|++...
T Consensus 238 ~iTEldi~~~~~~~~~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~v~git~Wg~~D~ 296 (331)
T 1n82_A 238 HITELDVSMFEFHDRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTFWGIADD 296 (331)
T ss_dssp EEEEEEEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBTT
T ss_pred EEEeceecCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCcccEEEEECCCCC
Confidence 999998754210 011 23445666666666444 33 44 899988743
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.19 E-value=4e-10 Score=117.31 Aligned_cols=116 Identities=16% Similarity=0.228 Sum_probs=85.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCCCCCCcc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g~~~~~~ 143 (341)
++||+.||++|+|+||++. + | . + +++++.|.++||+|+.++... .|.. +.. +.....
T Consensus 375 ~~dl~lmK~~G~N~IR~~h-y-----p--~---~-------~~~ydlcDe~Gi~V~~E~~~~~~g~~--~~~-~~~~~~- 432 (1010)
T 3bga_A 375 EQDIRLMKQHNINMVRNSH-Y-----P--T---H-------PYWYQLCDRYGLYMIDEANIESHGMG--YGP-ASLAKD- 432 (1010)
T ss_dssp HHHHHHHHHTTCCEEEETT-S-----C--C---C-------HHHHHHHHHHTCEEEEECSCBCGGGC--SST-TCTTTC-
T ss_pred HHHHHHHHHCCCCEEEeCC-C-----C--C---C-------HHHHHHHHHCCCEEEEccCccccCcc--ccC-CcCCCC-
Confidence 7899999999999999852 1 1 1 1 268899999999999987221 0000 000 000011
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+...+.+.+.++.+++|++++|.|++|.+.||+... ...+++++.||+.||+++|..+.
T Consensus 433 ---~~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~~ 491 (1010)
T 3bga_A 433 ---STWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYER 491 (1010)
T ss_dssp ---GGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECGG
T ss_pred ---HHHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeCC
Confidence 456777889999999999999999999999999741 24678899999999999998764
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=99.17 E-value=3.9e-10 Score=108.82 Aligned_cols=226 Identities=12% Similarity=0.154 Sum_probs=139.4
Q ss_pred HHHHHHHHHCCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCC-CCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG-SQNGNEHSATRDG 141 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g-~~~~~~~~g~~~~ 141 (341)
+++.+.| ..+||.|++. +.| ...+|.++ .|+ +..+|++|++|+++||.|....-.... .|
T Consensus 195 ~~~~~l~-~~~FN~vT~eNemKW-~~iEP~~G-~~~---f~~~D~ivd~a~~nGi~VrgHtLvWhs~~q----------- 257 (530)
T 1us2_A 195 SREQAVV-KKHFNHLTAGNIMKM-SYMQPTEG-NFN---FTNADAFVDWATENNMTVHGHALVWHSDYQ----------- 257 (530)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECCCGGG-----------
T ss_pred HHHHHHH-HhhCCeEEECCcccH-HHhcCCCC-ccC---chHHHHHHHHHHHCCCEEEEeccccccccc-----------
Confidence 4667777 6799999995 666 45566553 453 789999999999999998753211100 01
Q ss_pred ccCCc-------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----C--hHHHH-------HHHHHHHHHHH
Q 019395 142 FQEWG-------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A--LDTLK-------SYYKAGYDAVR 201 (341)
Q Consensus 142 ~~~w~-------~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~--~~~~~-------~~~~~~~~aIR 201 (341)
.+.|. +...++..++++.+++||++++.|..|+++|||..... . ...|. .|+..+++++|
T Consensus 258 ~P~Wv~~~~Gs~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~AF~~Ar 337 (530)
T 1us2_A 258 VPNFMKNWAGSAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTAR 337 (530)
T ss_dssp SCHHHHTCCSCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHH
T ss_pred CchHHhcCCCCHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHHHHHHHH
Confidence 12232 35677888999999999998788999999999875221 1 11221 78999999999
Q ss_pred hcCCCceEEEeCCCCCC-C-----hhhhhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhh
Q 019395 202 KYTSTAYVIMSNRLGPA-D-----HKELLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 271 (341)
Q Consensus 202 ~~~p~~~v~~~~~~~~~-~-----~~~~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
+.+|+..+++.+..-.. . ...+.+ ...+-+-+-++.|....+. + ++.+.. .+..++
T Consensus 338 ~aDP~AkL~~NDYn~~~~~~k~~~~~~lVk~l~~~GvpIDGIG~Q~H~~~~~p------~----~~~i~~----~L~~~a 403 (530)
T 1us2_A 338 AADPAVILYYNDYNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYP------S----IANISA----AMKKVV 403 (530)
T ss_dssp HHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------C----HHHHHH----HHHHHH
T ss_pred HHCCCCEEEecccccccccchhHHHHHHHHHHHHCCCceeEEEEeeecCCCCC------C----HHHHHH----HHHHHH
Confidence 99999999886522111 1 111211 1112344556667643210 1 122222 222333
Q ss_pred ccCCCceEEEeecCCCCC-----------CCCC---HHHHHHHHHHHHHHH--c---cCCCcEEEecccc
Q 019395 272 TSNGPLTFVGEWTCEWNV-----------KDAS---KQDYQRFANAQLDVY--G---RATFGWAYWAHKC 322 (341)
Q Consensus 272 ~~~~~pv~vGE~g~~~~~-----------~~~~---~~~~~~~~~~~~~~~--~---~~~~Gw~~W~~k~ 322 (341)
.. +.||.|+|+...... ...+ .+...+++++.+.++ . ....|-++|.+..
T Consensus 404 ~l-GlpI~ITElDv~~~~~~~~~~~~~~~~~~t~~~~~~QA~~y~~~~~~~l~~~~~~~v~GIT~WG~~D 472 (530)
T 1us2_A 404 DL-GLLVKITELDVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTTD 472 (530)
T ss_dssp TT-TCEEEEEEEEEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSBG
T ss_pred hc-CCeEEEEeCccCCCcccccccccccccCCChHHHHHHHHHHHHHHHHHhhhccCCceEEEEEEcCcC
Confidence 33 678999999865321 0112 233456666777776 2 2457899998863
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=1.7e-10 Score=118.74 Aligned_cols=141 Identities=19% Similarity=0.174 Sum_probs=106.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++++++||++|+|+||+.|.| ...+|.++ .|+-+....|+++|+.|+++||+|||-.--+ .++.+..| +.|.
T Consensus 39 ~d~l~kmka~G~NtV~~yvfW-~~hEP~~G-~fdF~g~~dL~~fl~~a~e~Gl~ViLr~GPy---i~aE~~~G---G~P~ 110 (971)
T 1tg7_A 39 IDIFEKVKALGFNCVSFYVDW-ALLEGNPG-HYSAEGIFDLQPFFDAAKEAGIYLLARPGPY---INAEVSGG---GFPG 110 (971)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEECCSC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEeccH-HHhCCCCC-eecccchHHHHHHHHHHHHcCCEEEEecCCc---ccceecCC---Ccce
Confidence 899999999999999999994 67778764 6765666679999999999999999953211 12212112 2233
Q ss_pred Cc-----------hhHHHHHHHHHHHHHHHhCCCC-----ceeEEEeecCCCCCCCC--hHHHHHHHHHHHHHHHhcCCC
Q 019395 145 WG-----------DSNVADTVAVIDFLAARYANRP-----SLAAIELINEPLAPGVA--LDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 145 w~-----------~~~~~~~~~~~~~la~~y~~~~-----~v~~~el~NEP~~~~~~--~~~~~~~~~~~~~aIR~~~p~ 206 (341)
|. +.+.++..++++.|+++++.++ .|++|++=||......+ .+..+.|++.+.+++|+.+++
T Consensus 111 WL~~~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~ 190 (971)
T 1tg7_A 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (971)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred eecccCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCC
Confidence 32 5678888899999999988765 79999999998642100 024788999999999999999
Q ss_pred ceEEEeC
Q 019395 207 AYVIMSN 213 (341)
Q Consensus 207 ~~v~~~~ 213 (341)
.+++...
T Consensus 191 vPl~tn~ 197 (971)
T 1tg7_A 191 VPFISND 197 (971)
T ss_dssp SCBBCCB
T ss_pred eeEEEec
Confidence 9887764
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-09 Score=112.98 Aligned_cols=202 Identities=19% Similarity=0.185 Sum_probs=121.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec----CCCCCCC-----CCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL----HAAPGSQ-----NGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl----h~~~g~~-----~~~~~ 135 (341)
++||+.||++|+|+||++. + |.. + ++.++|.++||+|+-+. |++.... ...+.
T Consensus 378 ~~Di~lmK~~g~NaVRtsH-y-----p~~--~----------~fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~~ 439 (1032)
T 3oba_A 378 VRDLILMKKFNINAVRNSH-Y-----PNH--P----------KVYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAEY 439 (1032)
T ss_dssp HHHHHHHHHTTCCEEECTT-S-----CCC--T----------THHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCcEEEecC-C-----CCh--H----------HHHHHHHHCCCEEEEccccccCCccccccccccccccc
Confidence 7899999999999999852 1 211 1 67799999999999876 4321000 00011
Q ss_pred CCCC-------CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCce
Q 019395 136 SATR-------DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 136 ~g~~-------~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 208 (341)
++.+ .....-.+...+.+.+.++.+++|++++|.|++|.+.||+... ...+++++.+|+.||.++
T Consensus 440 ~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptRp 511 (1032)
T 3oba_A 440 PDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTRL 511 (1032)
T ss_dssp TTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTSE
T ss_pred cccccccccccccccCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCCc
Confidence 1100 0000011466788889999999999999999999999998641 235788999999999999
Q ss_pred EEEeCCCCCCChhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC
Q 019395 209 VIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~ 288 (341)
|...+.+. ...-.+++. .|... ++ +....... ........+|+++.||+-+..
T Consensus 512 v~~e~~~~------------~~~~Di~s~-mY~~~---------~~-i~~~~~~~----~~~~~~~~kP~i~~Ey~Hamg 564 (1032)
T 3oba_A 512 VHYEGDLN------------ALSADIFSF-MYPTF---------EI-MERWRKNH----TDENGKFEKPLILCEYGHAMG 564 (1032)
T ss_dssp EECTTCTT------------CTTCSSEEE-ESCCH---------HH-HHHHHHHH----BCTTSCBSSCEEEEEESCCCS
T ss_pred EEeccCcC------------cccceeeec-cCCCH---------HH-HHHHHhhC----cccccccCCCEEEEecccccc
Confidence 98754321 112234555 46321 11 11111100 000111256899999997764
Q ss_pred CCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 289 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
...+. +..|.+.. ..+. ...|-|.|.|-..+
T Consensus 565 n~~g~---l~~yw~~~-~~~p-~~~GgfiWdw~Dq~ 595 (1032)
T 3oba_A 565 NGPGS---LKEYQELF-YKEK-FYQGGFIWEWANHG 595 (1032)
T ss_dssp SCCCC---HHHHHHHH-HHCT-TEEEEEESCSBCCC
T ss_pred CCCCC---HHHHHHHH-HhCC-CeeEEEEEeccccc
Confidence 33333 33333321 2222 56699999987543
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.3e-09 Score=101.11 Aligned_cols=232 Identities=13% Similarity=0.124 Sum_probs=136.5
Q ss_pred HHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe-c--CC-CCCCCCCCCCCCCC
Q 019395 66 EDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HA-APGSQNGNEHSATR 139 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild-l--h~-~~g~~~~~~~~g~~ 139 (341)
++.+.| ..+||.|++ .+.|. .++|.++ .|+ +..+|++|++|+++||.|... | |. .|..... +..|.+
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW~-~~ep~~G-~~~---f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~G~~ 105 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKPV-SLQPREG-EWN---WEGADKIVEFARKHNMELRFHTLVWHSQVPEWFFI-DENGNR 105 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEECCSEESSSCCGGGGB-CTTSCB
T ss_pred HHHHHH-HhcCCEEEECCcccHH-HhcCCCC-ccC---chHHHHHHHHHHHCCCEEEEeeccccccCchhHhc-CCCCcc
Confidence 455555 689999999 67774 5566553 453 689999999999999998653 2 32 2221110 001110
Q ss_pred C--C-cc---CCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChHHH-----HHHHHHHHHHHHh-cC
Q 019395 140 D--G-FQ---EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDTL-----KSYYKAGYDAVRK-YT 204 (341)
Q Consensus 140 ~--~-~~---~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~--~~~~~-----~~~~~~~~~aIR~-~~ 204 (341)
. + .. ... +...++..++++.+++||++ .|..|+++|||....- ....| ..|+..++++.|+ .+
T Consensus 106 ~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~~d 183 (356)
T 2uwf_A 106 MVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTDYIKVAFETARKYGG 183 (356)
T ss_dssp GGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCcccchHHhhccHHHHHHHHHHHHhhCC
Confidence 0 0 00 112 34567788999999999997 7888999999985321 01111 3688999999999 99
Q ss_pred CCceEEEeCCCCCCCh---hh---hhh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC
Q 019395 205 STAYVIMSNRLGPADH---KE---LLS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 205 p~~~v~~~~~~~~~~~---~~---~~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
|+..+++.+-.- ... .. +.+ ...+-+-+-++.|....+. + ++.+.. .+..++..
T Consensus 184 P~a~L~~Ndyn~-~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p------~----~~~~~~----~l~~~a~~- 247 (356)
T 2uwf_A 184 EEAKLYINDYNT-EVPSKRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWP------S----IEDTRA----SFEKFTSL- 247 (356)
T ss_dssp TTCCEEEEESCT-TSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------C----HHHHHH----HHHHHHTT-
T ss_pred CCCEEEeccccc-cccchhHHHHHHHHHHHHCCCcccEEEEEEecCCCCC------C----HHHHHH----HHHHHHhc-
Confidence 999999875211 111 11 221 1122344556668653210 1 122222 22233333
Q ss_pred CCceEEEeecCCCCCCC----------CC---HHHHHHHHHHHHHHHcc---CCCcEEEecccc
Q 019395 275 GPLTFVGEWTCEWNVKD----------AS---KQDYQRFANAQLDVYGR---ATFGWAYWAHKC 322 (341)
Q Consensus 275 ~~pv~vGE~g~~~~~~~----------~~---~~~~~~~~~~~~~~~~~---~~~Gw~~W~~k~ 322 (341)
|.||.|+|+........ .+ .+....+++..+.++.+ ...|-++|.+..
T Consensus 248 Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~git~WG~~D 311 (356)
T 2uwf_A 248 GLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATISSVTFWGIAD 311 (356)
T ss_dssp TCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSST
T ss_pred CCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhccCCEEEEEEECCCC
Confidence 66899999986542110 11 23344566666666543 346999998863
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2e-09 Score=99.60 Aligned_cols=226 Identities=16% Similarity=0.155 Sum_probs=136.7
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe---cCCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LHAAPGSQNGNEHSATR 139 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild---lh~~~g~~~~~~~~g~~ 139 (341)
+++.+.| ..+||.|++ .+.|. ..+|.++ |+ +..+|++|++|+++||.|... .|. + .|...+...
T Consensus 28 ~~~~~~~-~~~fn~vt~en~~kW~-~~ep~~G--~~---f~~~D~~v~~a~~~gi~v~ghtl~W~~-~-~q~P~W~~~-- 96 (348)
T 1w32_A 28 SARQNIV-RAEFNQITAENIMKMS-YMYSGSN--FS---FTNSDRLVSWAAQNGQTVHGHALVWHP-S-YQLPNWASD-- 96 (348)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSGG-GGEETTE--EC---CHHHHHHHHHHHHTTCEEEEEEEECCC-G-GGCCTTCST--
T ss_pred HHHHHHH-HhhCCeEEECCccchh-hhccCCC--CC---chHHHHHHHHHHHCCCEEEEEeeecCc-c-ccCchhhhc--
Confidence 3555556 679999999 56664 5556554 53 788999999999999998753 232 0 011111110
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----C------------hHHH--HHHHHHHHHHHH
Q 019395 140 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A------------LDTL--KSYYKAGYDAVR 201 (341)
Q Consensus 140 ~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~------------~~~~--~~~~~~~~~aIR 201 (341)
..+...++..++++.+++||++ .|..|+++|||..... . .+.+ ..|+..+++..|
T Consensus 97 -----~~~~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~~aF~~Ar 169 (348)
T 1w32_A 97 -----SNANFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRAR 169 (348)
T ss_dssp -----TCTTHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHHHHHHHHH
Confidence 0135778899999999999997 6888999999875220 1 1223 468899999999
Q ss_pred hcCCCceEEEeCCCCCCC---hhhh---hh----ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhh
Q 019395 202 KYTSTAYVIMSNRLGPAD---HKEL---LS----FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT 271 (341)
Q Consensus 202 ~~~p~~~v~~~~~~~~~~---~~~~---~~----~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
+.+|+..+++.+-..... ...+ .+ ...+-+-+-++.|....+. + ++.+.. .+..++
T Consensus 170 ~adP~a~L~~NDyn~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~p------~----~~~~~~----~l~~~a 235 (348)
T 1w32_A 170 AADPTAELYYNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMNDYP------S----IANIRQ----AMQKIV 235 (348)
T ss_dssp HHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSSS------C----HHHHHH----HHHHHH
T ss_pred HhCCCCEEEecccccccCCchHHHHHHHHHHHHHCCCcccEEEeccccCCCCC------C----HHHHHH----HHHHHh
Confidence 999999998875221101 1112 21 1122345556668642110 1 122221 223334
Q ss_pred c-cCCCceEEEeecCCCCCC-------------C-----CCHHHHHHHHHHHHHHHc--c---CCCcEEEecccc
Q 019395 272 T-SNGPLTFVGEWTCEWNVK-------------D-----ASKQDYQRFANAQLDVYG--R---ATFGWAYWAHKC 322 (341)
Q Consensus 272 ~-~~~~pv~vGE~g~~~~~~-------------~-----~~~~~~~~~~~~~~~~~~--~---~~~Gw~~W~~k~ 322 (341)
. ..|.||.|+|++...... . ...+...++++..+.++. + ...|-++|.+..
T Consensus 236 ~~~~Gl~i~ITElDv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~QA~~y~~~~~~~~~~~~~~~v~git~WG~~D 310 (348)
T 1w32_A 236 ALSPTLKIKITELDVRLNNPYDGNSSNNYTNRNDCAVSCAGLDRQKARYKEIVQAYLEVVPPGRRGGITVWGIAD 310 (348)
T ss_dssp TTCSSCEEEEEEEEEESCCTTSSCSSSCCCSGGGGSSCCHHHHHHHHHHHHHHHHHHHHSCTTCEEEEEESCSBG
T ss_pred cccCCCeEEEEeCcccCCCcccccccccccCCCccccchhHHHHHHHHHHHHHHHHhccccCCceEEEEEECCcc
Confidence 1 347789999998653210 0 113344566666776665 2 345899998864
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=3.3e-09 Score=99.13 Aligned_cols=135 Identities=13% Similarity=0.168 Sum_probs=95.6
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe-c--CCC-CCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD-L--HAA-PGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild-l--h~~-~g~~~~~~~~g~ 138 (341)
+++.+.+ ..+||.||+ .+.|. .++|.++ .|+ ++.+|++|++|+++||.|... | |.. |+.... +..|
T Consensus 51 ~~~~~l~-~~~fn~vt~eN~~kW~-~~ep~~G-~~~---f~~~D~~v~~a~~~gi~vrgHtlvW~~q~P~W~~~-d~~g- 122 (378)
T 1ur1_A 51 ERLNTLI-AKEFNSITPENCMKWG-VLRDAQG-QWN---WKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVFK-NADG- 122 (378)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHBCTTC-CBC---CHHHHHHHHHHHHTTCEEEEEEEECSSSSCGGGTB-CTTS-
T ss_pred HHHHHHH-HccCCeEEECCcccHH-HhcCCCC-ccC---chHHHHHHHHHHHCCCEEEeecccccccCchhhhc-CCCC-
Confidence 5566666 569999999 67774 5566554 454 688999999999999998653 2 432 221110 0011
Q ss_pred CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC--CChHHH-----HHHHHHHHHHHHhcCCCceEE
Q 019395 139 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG--VALDTL-----KSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 139 ~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~--~~~~~~-----~~~~~~~~~aIR~~~p~~~v~ 210 (341)
. .+. +...++..++++.+++||++ .|..|+++|||.... .....| ..|.+.++++.|+.+|+..++
T Consensus 123 ---~-~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~~dP~a~L~ 196 (378)
T 1ur1_A 123 ---S-YISKAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLM 196 (378)
T ss_dssp ---C-BCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEE
T ss_pred ---C-CCCHHHHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHHhCCCCEEE
Confidence 1 133 56778889999999999999 788899999998632 111112 368889999999999999999
Q ss_pred EeC
Q 019395 211 MSN 213 (341)
Q Consensus 211 ~~~ 213 (341)
+.+
T Consensus 197 ~Nd 199 (378)
T 1ur1_A 197 YND 199 (378)
T ss_dssp EEE
T ss_pred ecc
Confidence 875
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.08 E-value=3.5e-09 Score=107.99 Aligned_cols=168 Identities=11% Similarity=0.032 Sum_probs=107.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+... |. -++++++|.++||+|+.++... .... +.. ..
T Consensus 310 ~~dl~~~K~~G~N~iR~~h~------p~------------~~~~~dlcDe~GilV~~E~~~~--w~~~----~~~---~~ 362 (801)
T 3gm8_A 310 HYRLKLLKDMGCNAIRTSHN------PF------------SPAFYNLCDTMGIMVLNEGLDG--WNQP----KAA---DD 362 (801)
T ss_dssp HHHHHHHHHTTCCEEEETTS------CC------------CHHHHHHHHHHTCEEEEECCSS--SSSC----SST---TS
T ss_pred HHHHHHHHHCCCcEEEecCC------CC------------cHHHHHHHHHCCCEEEECCchh--hcCC----CCc---cc
Confidence 78999999999999998531 11 1478999999999999986421 1100 000 01
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCC-hhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD-HKEL 223 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~-~~~~ 223 (341)
..+...+...+.++.+++|++++|.|++|.+.||+.+ .+ ..+++++.+.+|+.||.+++..+....... ...+
T Consensus 363 ~~~~~~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~~g--~~----~~~~~~l~~~~k~~DptRpvt~~~~~~~~~~~~~~ 436 (801)
T 3gm8_A 363 YGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTG--AT----PEIQHNLVSLFHQLDPDRPVTQGGTDPTRGMKTDY 436 (801)
T ss_dssp GGGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSS--CC----HHHHHHHHHHHHHHCTTSCEEEETCCC--------
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCeEEEEECccCCCC--cH----HHHHHHHHHHHHHHCCCCCEEEcccccccccccch
Confidence 1123445556788999999999999999999999953 22 578899999999999999998874321111 1111
Q ss_pred hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCC
Q 019395 224 LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286 (341)
Q Consensus 224 ~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~ 286 (341)
... ...-.|+++++|..+- + .++... .+...+|+++.|||.+
T Consensus 437 ~~~--~~~~Dv~g~ny~~~~y--------~-~~~~~~----------~~~p~kpi~~sE~~~~ 478 (801)
T 3gm8_A 437 QKK--FNYLDIIGFNGNGEEI--------G-ELEHFH----------KNYPTLCAIATEVPHT 478 (801)
T ss_dssp ------CCCSEEEECGGGGST--------T-HHHHHH----------HHCTTSEEEESSCCBB
T ss_pred hhc--ccccCEEEeccchhhh--------h-hhHHHH----------HhCCCCcEEEEeCCCc
Confidence 111 0013577887774321 0 011111 1234678999999975
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-08 Score=94.67 Aligned_cols=238 Identities=13% Similarity=0.139 Sum_probs=137.0
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEec---CC-CCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL---HA-APGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildl---h~-~~g~~~~~~~~g~ 138 (341)
+++.+.| ..+||.|++ .+.|. .++|.++ .|+ +..+|++|++|+++||.|.... |. .|..... +..|.
T Consensus 42 ~~~~~l~-~~~fn~vt~eNe~kW~-~~ep~~G-~~~---f~~~D~~v~~a~~~gi~vrghtlvW~~q~P~W~~~-~~~G~ 114 (379)
T 1r85_A 42 EKDVQML-KRHFNSIVAENVMKPI-SIQPEEG-KFN---FEQADRIVKFAKANGMDIRFHTLVWHSQVPQWFFL-DKEGK 114 (379)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEECSCCSTTCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCeEEECCcccHH-HhcCCCC-ccC---chhHHHHHHHHHHCCCEEEEecccccccCchhhhc-CcCCc
Confidence 4566666 669999999 47764 5566553 453 6899999999999999987643 22 1211110 00111
Q ss_pred CC--C-cc---CCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChHHH-----HHHHHHHHHHHHh-c
Q 019395 139 RD--G-FQ---EWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDTL-----KSYYKAGYDAVRK-Y 203 (341)
Q Consensus 139 ~~--~-~~---~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~--~~~~~-----~~~~~~~~~aIR~-~ 203 (341)
+. + .. ... +...++..++++.+++||++ .|..|+++|||....- ....| ..|+..++++.|+ .
T Consensus 115 ~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~a 192 (379)
T 1r85_A 115 PMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYG 192 (379)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccCchHHHhhhHHHHHHHHHHHHhhC
Confidence 00 0 00 112 34567788999999999998 7888999999985321 11112 3688999999999 9
Q ss_pred CCCceEEEeCCC--CCCChhhhhh---c----cCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccC
Q 019395 204 TSTAYVIMSNRL--GPADHKELLS---F----ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSN 274 (341)
Q Consensus 204 ~p~~~v~~~~~~--~~~~~~~~~~---~----~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
+|+..+++.+-. .......+.. . ..+-+-+-+..|.-..+ .+ .+.+.. .+..++..
T Consensus 193 dP~a~L~~NDyn~~~~~k~~~~~~~v~~l~~~g~piDgIG~Q~H~~~~~------p~----~~~~~~----~l~~~a~l- 257 (379)
T 1r85_A 193 GDNIKLYMNDYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGW------PS----EAEIEK----TINMFAAL- 257 (379)
T ss_dssp CTTSEEEEEESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSS------SC----HHHHHH----HHHHHHHT-
T ss_pred CCCCEEEecccccccchhHHHHHHHHHHHHHCCCceeEEEEeEEecCCC------CC----HHHHHH----HHHHHHhc-
Confidence 999999987521 1111112211 1 11234455555752111 11 122222 22223333
Q ss_pred CCceEEEeecCCCCCCC---------CC---HHHHHHHHHHHHHHHccC-C-Cc-EEEeccccCCCCC
Q 019395 275 GPLTFVGEWTCEWNVKD---------AS---KQDYQRFANAQLDVYGRA-T-FG-WAYWAHKCEANHW 327 (341)
Q Consensus 275 ~~pv~vGE~g~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~-~-~G-w~~W~~k~~~~~W 327 (341)
|.||.|+|+........ .+ .+....+++..+.++.+. . ++ -++|.+... ..|
T Consensus 258 GlpI~iTElDi~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~V~git~WG~~D~-~sW 324 (379)
T 1r85_A 258 GLDNQITELDVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIADN-HTW 324 (379)
T ss_dssp TCEEEEEEEEECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTT-SCG
T ss_pred CCeEEEeeccccCCCcccccccccCCCCHHHHHHHHHHHHHHHHHHHhCcCceeEEEEeCCcCC-CCc
Confidence 66899999987542110 01 233456666666665542 2 44 889988632 344
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=112.65 Aligned_cols=122 Identities=20% Similarity=0.218 Sum_probs=87.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+.-+ ..|.+ +++++.|.++||+|+.|++..... .+
T Consensus 355 ~~~l~~~k~~g~N~iR~wgg----------~~y~~------~~~~d~cD~~GilV~~e~~~~~~~------------~~- 405 (848)
T 2je8_A 355 QTLFRDMKEANMNMVRIWGG----------GTYEN------NLFYDLADENGILVWQDFMFACTP------------YP- 405 (848)
T ss_dssp HHHHHHHHHTTCCEEEECTT----------SCCCC------HHHHHHHHHHTCEEEEECSCBSSC------------CC-
T ss_pred HHHHHHHHHcCCcEEEeCCC----------ccCCC------HHHHHHHHHcCCEEEECcccccCC------------CC-
Confidence 67899999999999998210 01111 368899999999999998632100 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----C----CCh---HH-HH----HHHHHHHHHHHhcCCCce
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----G----VAL---DT-LK----SYYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----~----~~~---~~-~~----~~~~~~~~aIR~~~p~~~ 208 (341)
..+...+.+.+.++.+++|++++|.|++|.+.|||... + .+. +. +. .|.+.+.+.+|+.||+++
T Consensus 406 ~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~ 485 (848)
T 2je8_A 406 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 485 (848)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 11466778889999999999999999999999998520 0 011 11 11 245678899999999999
Q ss_pred EEEeCCC
Q 019395 209 VIMSNRL 215 (341)
Q Consensus 209 v~~~~~~ 215 (341)
+..++++
T Consensus 486 v~~~S~~ 492 (848)
T 2je8_A 486 YVHSSPY 492 (848)
T ss_dssp EESSBSS
T ss_pred EEecCCC
Confidence 9876543
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=99.04 E-value=9.7e-09 Score=94.52 Aligned_cols=230 Identities=13% Similarity=0.204 Sum_probs=140.7
Q ss_pred HHHHHHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE---ecCCC-CCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAA-PGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil---dlh~~-~g~~~~~~~~g~ 138 (341)
+.....+-...||.|.. .+.|. .++|.++ .|+ ++..|++|++|+++||.|.. -.|.. |....
T Consensus 47 ~~~y~~~~~~~Fn~~t~eN~mKW~-~iep~~G-~~~---f~~~D~~v~~a~~~gi~vrgHtLvWh~q~P~W~~------- 114 (341)
T 3niy_A 47 EEKYMEVARREFNILTPENQMKWD-TIHPERD-RYN---FTPAEKHVEFAEENNMIVHGHTLVWHNQLPGWIT------- 114 (341)
T ss_dssp HHHHHHHHHHHCSEEEESSTTSHH-HHCCBTT-EEE---CHHHHHHHHHHHHTTCEEEEEEEECSSSCCHHHH-------
T ss_pred CHHHHHHHHHhCCEEEECcccchH-HhcCCCC-ccC---hHHHHHHHHHHHHCCCeEEeeeccccccCchhhh-------
Confidence 44455555568999999 77774 5566553 453 67899999999999999853 23421 21100
Q ss_pred CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCCceEE
Q 019395 139 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--LDTL-----KSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 139 ~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~v~ 210 (341)
...|. +...+.+.++++.+++||++ .|..||++|||....-+ ...| ..|...++++.|+.+|+..++
T Consensus 115 ---~~~~~~~~~~~~~~~~i~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~ 189 (341)
T 3niy_A 115 ---GREWTKEELLNVLEDHIKTVVSHFKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILI 189 (341)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHTTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEE
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHcCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHCCCceEE
Confidence 01244 56778899999999999998 57779999999853210 1112 268899999999999999999
Q ss_pred EeCCCCC-CC--hhh-------hhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEE
Q 019395 211 MSNRLGP-AD--HKE-------LLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFV 280 (341)
Q Consensus 211 ~~~~~~~-~~--~~~-------~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~v 280 (341)
+.+-.-. .. ... +.....+-+-+-++.|.... . .+. +.+.. .+..++.. |.||.|
T Consensus 190 ~NDyn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~-~-----~~~----~~~~~----~l~~~a~l-Gl~v~i 254 (341)
T 3niy_A 190 YNDYSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYR-G-----LNY----DSFRR----NLERFAKL-GLQIYI 254 (341)
T ss_dssp EEESSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETT-C-----CCH----HHHHH----HHHHHHHT-TCEEEE
T ss_pred eeccccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCC-C-----CCH----HHHHH----HHHHHHHc-CCeEEE
Confidence 8752211 11 111 11122345667788886432 1 111 11221 22333333 678999
Q ss_pred EeecCCCCCCCC---CHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCC
Q 019395 281 GEWTCEWNVKDA---SKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHW 327 (341)
Q Consensus 281 GE~g~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W 327 (341)
+|+......... ..+...+++++.+.++-+ ...|-++|.+... ..|
T Consensus 255 TElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~git~Wg~~D~-~sW 305 (341)
T 3niy_A 255 TEMDVRIPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAIQFWGFTDK-YSW 305 (341)
T ss_dssp EEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBTT-SCS
T ss_pred EeccccCCCCCChhHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCccC-Ccc
Confidence 999865321111 123344556666655444 5779999998643 344
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.8e-07 Score=87.66 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=92.1
Q ss_pred HHHHHHHHHCCCCEEEcCcc----cccccC--CCCCC----Cccc----chHHHHHHHHHHHHHcCCeEEEecCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVG----WWIAND--PTPPK----PFVG----GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQ 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~----~~~~~~--~~~~~----~~~~----~~l~~ld~~i~~a~~~gi~vildlh~~~g~~ 130 (341)
+..++..++.|||.||+-+. -+..-. |-..+ .+++ ++++.+|++|+.|.++||++-|=+- . |..
T Consensus 55 ~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~-W-g~~ 132 (463)
T 3kzs_A 55 EYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCI-W-GSP 132 (463)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESS-C-HHH
T ss_pred HHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEE-e-CCc
Confidence 67799999999999999873 011100 00001 1222 7999999999999999999887432 1 100
Q ss_pred CCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEE
Q 019395 131 NGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 131 ~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~ 210 (341)
...+ ....+....+++.|++||++.++|+ |.|.||-... .. ....+++.+.|++.+|++++.
T Consensus 133 ---v~~~---------~m~~e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-~~----~~~w~~~~~~i~~~dp~~L~T 194 (463)
T 3kzs_A 133 ---VSHG---------EMNVDQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-VK----TAEWEALATSIKAIDKNHLMT 194 (463)
T ss_dssp ---HHTT---------SCCHHHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-SS----HHHHHHHHHHHHHHCCSSCEE
T ss_pred ---cccC---------CCCHHHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-cC----HHHHHHHHHHHHhcCCCCcEE
Confidence 0000 1346778899999999999999998 9999997742 22 345666788899999999999
Q ss_pred EeCC
Q 019395 211 MSNR 214 (341)
Q Consensus 211 ~~~~ 214 (341)
+++.
T Consensus 195 ~H~~ 198 (463)
T 3kzs_A 195 FHPR 198 (463)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9963
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=4.4e-09 Score=103.19 Aligned_cols=138 Identities=15% Similarity=0.200 Sum_probs=97.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++++.||++|+|+||+.|.| ...+|.+ +.|+-+....|+++|+.|+++||+|||..--+ .++.+..| +.+.
T Consensus 43 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~-G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPy---i~aEw~~G---G~P~ 114 (654)
T 3thd_A 43 KDRLLKMKMAGLNAIQTYVPW-NFHEPWP-GQYQFSEDHDVEYFLRLAHELGLLVILRPGPY---ICAEWEMG---GLPA 114 (654)
T ss_dssp HHHHHHHHHTTCSEEEEECCH-HHHCSBT-TBCCCSGGGCHHHHHHHHHHTTCEEEEECCSC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEEech-hhcCCCC-CccCccchHHHHHHHHHHHHcCCEEEeccCCc---cccccCCC---cCCh
Confidence 999999999999999998877 5667765 46765566679999999999999999963111 11212111 2233
Q ss_pred Cc------------hhHHHHHHHHHHHHHHH-----hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhc-CCC
Q 019395 145 WG------------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY-TST 206 (341)
Q Consensus 145 w~------------~~~~~~~~~~~~~la~~-----y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~-~p~ 206 (341)
|. +.+.+...++++.|+++ |++.+.|+++++=||-..-+... +.|++.+.+..|+. +-+
T Consensus 115 WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~~d---~~Ym~~l~~~~~~~~Gi~ 191 (654)
T 3thd_A 115 WLLEKESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACD---FDYLRFLQKRFRHHLGDD 191 (654)
T ss_dssp GGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSCCC---HHHHHHHHHHHHHHHCSS
T ss_pred HHhcCCCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccccc---HHHHHHHHHHHHHhcCCc
Confidence 32 46777888888899988 77888999999999986422223 35555556666764 555
Q ss_pred ceEEEeC
Q 019395 207 AYVIMSN 213 (341)
Q Consensus 207 ~~v~~~~ 213 (341)
.+++..+
T Consensus 192 v~l~t~D 198 (654)
T 3thd_A 192 VVLFTTD 198 (654)
T ss_dssp SEEEEEE
T ss_pred eeeEeec
Confidence 6665554
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=4.6e-08 Score=89.62 Aligned_cols=228 Identities=13% Similarity=0.151 Sum_probs=136.1
Q ss_pred HHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCCCCCCCCccCC
Q 019395 69 KFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEW 145 (341)
Q Consensus 69 ~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~~g~~~~~~~w 145 (341)
..+....||.|.. .+.|. .++|.++ .|+ ++..|++|++|+++||.|.. |..- .+|...+......+ ..+
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW~-~iep~~G-~~~---f~~~D~~v~~a~~~gi~vrg--HtLvWh~q~P~W~~~~~~g-~~~ 101 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKFE-EVHPREH-EYT---FEAADEIVDFAVARGIGVRG--HTLVWHNQTPAWMFEDASG-GTA 101 (331)
T ss_dssp HHHHHHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHTTTCEEEE--CCSBCSSSCCGGGGBCTTS-SBC
T ss_pred HHHHHHhCCEEEECcccchh-hhcCCCC-ccC---hhHHHHHHHHHHHCCCEEee--eeeeccccCcHhHhccccC-CCC
Confidence 4444668999998 77764 5666553 454 67899999999999999754 2210 01111111000000 113
Q ss_pred c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC----hHHH-----HHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 146 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA----LDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 146 ~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
. ....+++.++++.+++||++ .|..||++|||.....+ ...| ..|...++++.|+.+|+..+++.+-.
T Consensus 102 ~~~~l~~~~~~~I~~v~~rYkg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar~adP~a~L~~NDyn 179 (331)
T 3emz_A 102 SREMMLSRLKQHIDTVVGRYKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAHEADPNALLFYNDYN 179 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHHhhCCCceEEecccc
Confidence 3 45677888999999999998 67889999999853211 1112 25788999999999999999997522
Q ss_pred CCCCh----------hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecC
Q 019395 216 GPADH----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 285 (341)
Q Consensus 216 ~~~~~----------~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~ 285 (341)
- ... ..+.....+-+-+-++.|..... .+ ++.+.. .+..++.. |.||.|+|+..
T Consensus 180 ~-~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~------p~----~~~~~~----~l~~~a~l-Gl~v~iTElDi 243 (331)
T 3emz_A 180 E-TDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHG------PS----MDEIRQ----AIERYASL-DVQLHVTELDL 243 (331)
T ss_dssp C-SSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTB------SC----HHHHHH----HHHHHHTT-SCEEEEEEEEE
T ss_pred c-cChHHHHHHHHHHHHHHHCCCccceEEECceecCCC------CC----HHHHHH----HHHHHHHc-CCcEEEeeccc
Confidence 1 111 11111223456778888964211 01 122222 22333433 66899999976
Q ss_pred CCCC--------CCCCH---HHHHHHHHHHHHHHcc---CCCcEEEecccc
Q 019395 286 EWNV--------KDASK---QDYQRFANAQLDVYGR---ATFGWAYWAHKC 322 (341)
Q Consensus 286 ~~~~--------~~~~~---~~~~~~~~~~~~~~~~---~~~Gw~~W~~k~ 322 (341)
.... ...+. +...+++++.+.++.+ ...|-++|.+..
T Consensus 244 ~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D 294 (331)
T 3emz_A 244 SVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVAD 294 (331)
T ss_dssp ESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSST
T ss_pred CCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCC
Confidence 4321 11122 2344556666665543 345999998864
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.1e-08 Score=87.91 Aligned_cols=233 Identities=13% Similarity=0.104 Sum_probs=136.3
Q ss_pred HHHHHH--HCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE---ecCCCCCCCCCCCCCCCC
Q 019395 67 DFKFLS--SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATR 139 (341)
Q Consensus 67 d~~~i~--~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil---dlh~~~g~~~~~~~~g~~ 139 (341)
....+- ..-||.|-. .+.| ..++|.++ .|+ +...|++|++|+++||.|.- -.|. |...+...
T Consensus 28 ~~~~~~~~~~~Fn~~t~eN~mKW-~~iep~~G-~~~---f~~~D~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~-- 96 (327)
T 3u7b_A 28 GEIDIINNKNEIGSITPENAMKW-EAIQPNRG-QFN---WGPADQHAAAATSRGYELRCHTLVWHS----QLPSWVAN-- 96 (327)
T ss_dssp HHHHHHTCTTTCCEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHTTTCEEEEEEEEEST----TCCHHHHT--
T ss_pred HHHHHHHhHhhCCeEEECccccH-HHhcCCCC-ccC---hHHHHHHHHHHHHCCCEEEEeeeecCC----cCcHHHhc--
Confidence 344455 567888876 4555 45666654 454 67889999999999999853 2232 11101000
Q ss_pred CCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChHHH-----HHHHHHHHHHHHhcCCCceEEE
Q 019395 140 DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDTL-----KSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 140 ~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~--~~~~~-----~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
..|. +...+.+.++++.+++||++ .|..||++|||....- ....+ ..|...++++.|+.+|+..+++
T Consensus 97 ---~~~~~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~~ 171 (327)
T 3u7b_A 97 ---GNWNNQTLQAVMRDHINAVMGRYRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLYY 171 (327)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEEe
Confidence 0133 45677888999999999998 5778999999985321 00112 2588899999999999999999
Q ss_pred eCCC-CCCC--hh---hhh----hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEE
Q 019395 212 SNRL-GPAD--HK---ELL----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 281 (341)
Q Consensus 212 ~~~~-~~~~--~~---~~~----~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vG 281 (341)
.+-. .... .. .+. ....+-+-+-++.|.....++......+ .++.+.. .+..++. .|.||.|+
T Consensus 172 Ndyn~e~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~p--~~~~~~~----~l~~~a~-lGl~v~iT 244 (327)
T 3u7b_A 172 NDYNLEYGNAKTEGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPTP--SRAKLAS----VLQGLAD-LGVDVAYT 244 (327)
T ss_dssp EESSCTTCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCCC--CHHHHHH----HHHHHHT-TTCEEEEE
T ss_pred ccccccCCchhhHHHHHHHHHHHHCCCCcceEEEcccccccccccccCCCC--CHHHHHH----HHHHHHh-cCCceEEE
Confidence 7521 1111 11 111 1123456778889987421111000111 1222222 2333333 37789999
Q ss_pred eecCCCCC--CCCCHHHHHHHHHHHHHHHcc--CCCcEEEecccc
Q 019395 282 EWTCEWNV--KDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 322 (341)
Q Consensus 282 E~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~ 322 (341)
|+...... +....+...+++++.+.++-+ ...|-++|.+..
T Consensus 245 ElDv~~~~p~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt~WG~~D 289 (327)
T 3u7b_A 245 ELDIRMNTPATQQKLQTNADAYARIVGSCMDVKRCVGITVWGISD 289 (327)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBG
T ss_pred ecccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCceEEEEEccCc
Confidence 99875421 111123334555555555433 567999998763
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=98.84 E-value=4.6e-09 Score=101.03 Aligned_cols=112 Identities=19% Similarity=0.310 Sum_probs=77.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCC---------CCCC--CCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAA---------PGSQ--NGN 133 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~---------~g~~--~~~ 133 (341)
+++++.||++|+|+||+.+.| ...+|.++ .|+ ++.||++|+.|+++||+|||-++.. |... ...
T Consensus 76 ~~~W~~mKa~G~NtVr~~V~W-~~hEP~~G-~yD---F~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~ 150 (552)
T 3u7v_A 76 AKVWPAIEKVGANTVQVPIAW-EQIEPVEG-QFD---FSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDK 150 (552)
T ss_dssp HHHHHHHHHHTCSEEEEEEEH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTT
T ss_pred HHHHHHHHHhCCCEEEEEehh-hccCCCCC-ccC---hhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcc
Confidence 666779999999999999965 56677653 665 5679999999999999999963321 1100 000
Q ss_pred ------CCCCCCCC-ccCCc----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 134 ------EHSATRDG-FQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 134 ------~~~g~~~~-~~~w~----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
...|.+.. .+..+ +...+.+.++++.|++||++++.|++|++-||+..
T Consensus 151 ~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 151 RFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred cCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 00111100 01111 23356677888999999999999999999999874
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.77 E-value=2.9e-08 Score=96.61 Aligned_cols=136 Identities=20% Similarity=0.236 Sum_probs=94.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCC-CCCCCCCCCCCCcc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS-QNGNEHSATRDGFQ 143 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~-~~~~~~~g~~~~~~ 143 (341)
+++++.||++|+|+||+.|.| ...+|.+ +.|+-+....|+++|+.|+++||+|||- ||. ..+.+..| +.+
T Consensus 35 ~d~l~kmKa~G~NtV~~yv~W-~~hEP~~-G~fdF~g~~dL~~fl~~a~~~Gl~Vilr----pGPYi~aEw~~G---G~P 105 (595)
T 4e8d_A 35 YHSLYNLKALGFNTVETYVAW-NLHEPCE-GEFHFEGDLDLEKFLQIAQDLGLYAIVR----PSPFICAEWEFG---GLP 105 (595)
T ss_dssp HHHHHHHHHTTCCEEEEECCH-HHHCSBT-TBCCCSGGGCHHHHHHHHHHTTCEEEEE----CCSCCCTTBGGG---GCC
T ss_pred HHHHHHHHHcCCCEEEEeccH-HHcCCCC-CeecccchhhHHHHHHHHHHcCCEEEEe----cCCceecccCCC---cCC
Confidence 899999999999999999985 6777766 4677556667999999999999999996 221 11111111 223
Q ss_pred CCc-----------hhHHHHHHHHHHHHHHHhCC-----CCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 019395 144 EWG-----------DSNVADTVAVIDFLAARYAN-----RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 144 ~w~-----------~~~~~~~~~~~~~la~~y~~-----~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
.|. +.+.++..++++.|+++.+. ...|+++++=||...-+ .. +.|.+.+.+..|+.+-+.
T Consensus 106 ~WL~~~p~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~-~~---~~Y~~~l~~~~~~~Gi~v 181 (595)
T 4e8d_A 106 AWLLTKNMRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYG-ED---KAYLRAIRQLMEECGVTC 181 (595)
T ss_dssp GGGGGSSSCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTC-CC---HHHHHHHHHHHHHTTCCS
T ss_pred hhhccCCceeccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccC-Cc---HHHHHHHHHHHHHcCCcE
Confidence 332 45666666666666665442 35688899999986422 22 456666666777778888
Q ss_pred eEEEeC
Q 019395 208 YVIMSN 213 (341)
Q Consensus 208 ~v~~~~ 213 (341)
+++..+
T Consensus 182 pl~t~d 187 (595)
T 4e8d_A 182 PLFTSD 187 (595)
T ss_dssp CEEEEE
T ss_pred EEEEcc
Confidence 888765
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=1.2e-08 Score=103.99 Aligned_cols=143 Identities=20% Similarity=0.216 Sum_probs=100.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++|++||++|+|+|++.|.| ...+|.++ .|+=+....|+++|+.|+++||+|||-.--+ .++.+..| +.|.
T Consensus 59 ~d~l~kmKa~GlNtV~tYV~W-n~hEP~eG-~fdFsg~~dL~~fl~la~e~GL~VILRpGPY---i~aEw~~G---G~P~ 130 (1003)
T 3og2_A 59 LDVFHKIKALGFNTVSFYVDW-ALLEGKPG-RFRADGIFSLEPFFEAATKAGIYLLARPGPY---INAEVSGG---GFPG 130 (1003)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBTT-BCCCCGGGCSHHHHHHHHHHTCEEEEEEESC---CCTTBGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hhcCCCCC-EecccchhhHHHHHHHHHHcCCEEEecCCcc---eeeecCCC---Cccc
Confidence 899999999999999999985 67777664 6765556679999999999999999953111 11111111 1222
Q ss_pred Cc-----------hhHHHHHHHHHHHHHHHhCCC-----CceeEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCc
Q 019395 145 WG-----------DSNVADTVAVIDFLAARYANR-----PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 145 w~-----------~~~~~~~~~~~~~la~~y~~~-----~~v~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~ 207 (341)
|. +.+.++..++++.|+++++.+ ..|+++++=||...-... ...=+.|++.+.++.|+.+-..
T Consensus 131 WL~~~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~V 210 (1003)
T 3og2_A 131 WLQRVKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIV 210 (1003)
T ss_dssp GGGGCCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCS
T ss_pred hhccCCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCce
Confidence 32 567788888888888887754 578899999998742110 0012467777788888888888
Q ss_pred eEEEeCCC
Q 019395 208 YVIMSNRL 215 (341)
Q Consensus 208 ~v~~~~~~ 215 (341)
+++..+++
T Consensus 211 Pl~t~d~~ 218 (1003)
T 3og2_A 211 PLINNDAF 218 (1003)
T ss_dssp CBBCCBSS
T ss_pred EEEEcCCc
Confidence 77776543
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-07 Score=89.76 Aligned_cols=161 Identities=15% Similarity=0.154 Sum_probs=99.5
Q ss_pred CHHHHHHHHHCCCCEEEcC-------cccccccCCC--CCCC------cccchHHHHHHHHHHHHHcCCeEEEecCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIP-------VGWWIANDPT--PPKP------FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 128 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlp-------i~~~~~~~~~--~~~~------~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g 128 (341)
.++-++.++++|+..||+| ..|.....|. .+.. +.+...-.+|+++++|++.|+.+++.+-...+
T Consensus 53 R~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~~ 132 (502)
T 1qw9_A 53 RQDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTR 132 (502)
T ss_dssp BHHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 3667888999999999998 2332222221 1111 11111124699999999999999999865321
Q ss_pred CCCCCCCCCCCCCccCCchhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChHHHHHHHH
Q 019395 129 SQNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 194 (341)
Q Consensus 129 ~~~~~~~~g~~~~~~~w~~~~~~~~~~~--------~~~la~~y~~-~~-~v~~~el~NEP~~~----~~~~~~~~~~~~ 194 (341)
. ......++++ |..+-.+++. .| .|..|||.|||... ..+.+++.+.+.
T Consensus 133 ~-----------------~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~ 195 (502)
T 1qw9_A 133 G-----------------IDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIAC 195 (502)
T ss_dssp C-----------------HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHH
T ss_pred C-----------------HHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHH
Confidence 0 1222222322 3445556643 34 67889999999842 246788999999
Q ss_pred HHHHHHHhcCCCceEEEeCCCCC-----CCh-hhhhhccCCCCcEEEEeeecCC
Q 019395 195 AGYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 195 ~~~~aIR~~~p~~~v~~~~~~~~-----~~~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
+.+++||+++|+..|+..++... ..+ ..+++.. ...-..+++|+|..
T Consensus 196 ~~a~aik~~dP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 196 EAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDHT-YDHVDYISLHQYYG 248 (502)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHHHhCCCeEEEEeCCCcccCcccCchHHHHHHhc-ccCCCEEEEeeCCC
Confidence 99999999999877665432111 111 2233321 23456899999953
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.3e-07 Score=99.24 Aligned_cols=123 Identities=19% Similarity=0.226 Sum_probs=90.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+.||+.||++|+|+||+.. + +.+ +++.++|.++||.|+-|+......... .+.....+.
T Consensus 377 ~~dl~~~k~~g~N~iR~~h-~-----~~~------------~~fydlcDelGilVw~e~~~~~~w~~~---~~~~~~~~~ 435 (1032)
T 2vzs_A 377 ADKLKYVLNLGLNTVRLEG-H-----IEP------------DEFFDIADDLGVLTMPGWECCDKWEGQ---VNGEEKGEP 435 (1032)
T ss_dssp HHHHHHHHHTTCCEEEEES-C-----CCC------------HHHHHHHHHHTCEEEEECCSSSGGGTT---TSTTSSSCC
T ss_pred HHHHHHHHHcCCCEEECCC-C-----CCc------------HHHHHHHHHCCCEEEEccccccccccc---CCCCCcccc
Confidence 7899999999999999832 1 111 377899999999999998432110000 000112345
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
|.+...+.+.+.++.+++|++++|.|+.|.+.||+... ..+.+.+.+.+|+.||.+++..++++
T Consensus 436 ~~~~~~~~~~~~~~~~V~R~rNHPSIi~Ws~gNE~~~~-------~~~~~~~~~~~k~~DptRpv~~~s~~ 499 (1032)
T 2vzs_A 436 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAASA 499 (1032)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCSSS
T ss_pred cChhHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCch-------HHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 66666778888999999999999999999999999641 23456677889999999999877544
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.67 E-value=6.7e-07 Score=87.11 Aligned_cols=161 Identities=12% Similarity=0.169 Sum_probs=98.6
Q ss_pred CHHHHHHHHHCCCCEEEcC-------cccccccCCC--CCCC------cccchHHHHHHHHHHHHHcCCeEEEecCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIP-------VGWWIANDPT--PPKP------FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 128 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlp-------i~~~~~~~~~--~~~~------~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g 128 (341)
-++-++.|+++|+..||+| ..|...+.|. .+.. +.+...-.+|+++++|++.|+.+++.+-...+
T Consensus 61 R~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~~ 140 (513)
T 2c7f_A 61 RKDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTR 140 (513)
T ss_dssp BHHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSSC
T ss_pred HHHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCCC
Confidence 3667888999999999997 1222212221 0111 11111124689999999999999998864311
Q ss_pred CCCCCCCCCCCCCccCCchhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChHHHHHHHH
Q 019395 129 SQNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYK 194 (341)
Q Consensus 129 ~~~~~~~~g~~~~~~~w~~~~~~~~~~~--------~~~la~~y~~-~~-~v~~~el~NEP~~~----~~~~~~~~~~~~ 194 (341)
. ......++++ |..+-.+++- .| .|..|||.|||... ..+.+.+.+.+.
T Consensus 141 ---------~--------~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~~ 203 (513)
T 2c7f_A 141 ---------G--------ISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAE 203 (513)
T ss_dssp ---------C--------HHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHHH
T ss_pred ---------C--------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHHH
Confidence 0 1222222332 3445556643 23 57789999999852 246788999999
Q ss_pred HHHHHHHhcCCCceEEEeCCCCC-----CCh-hhhhhccCCCCcEEEEeeecCC
Q 019395 195 AGYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 195 ~~~~aIR~~~p~~~v~~~~~~~~-----~~~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
+.+++||+++|+..|+..+.... ..+ ..+++.. ...-..++.|.|..
T Consensus 204 ~~a~a~k~~dP~i~via~G~~~~~~~~~~~W~~~~l~~~-~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 204 ETARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDYA-YDYVDYISLHQYYG 256 (513)
T ss_dssp HHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHHH-TTTCCEEEEEEEEC
T ss_pred HHHHHHHHhCCCcEEEEeCCCCCCCcccCchHHHHHHhc-ccCCCEEEEeecCC
Confidence 99999999999876665432111 111 2233332 34557899999953
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.65 E-value=7.1e-07 Score=81.75 Aligned_cols=220 Identities=10% Similarity=0.075 Sum_probs=131.1
Q ss_pred HCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE---ecCCCCCCCCCCCCCCCCCCccCCc-
Q 019395 73 SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATRDGFQEWG- 146 (341)
Q Consensus 73 ~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil---dlh~~~g~~~~~~~~g~~~~~~~w~- 146 (341)
..-||.+.. .+.|. .++|.++ .|+ +...|+++++|+++||.|.- -.|. |...+... ..|.
T Consensus 38 ~~~Fn~~t~eN~mKW~-~~ep~~G-~~~---f~~aD~~v~~a~~~gi~vrGHtLvWh~----q~P~W~~~-----~~~~~ 103 (335)
T 4f8x_A 38 KQNFGEITPANAMKFM-YTETEQN-VFN---FTEGEQFLEVAERFGSKVRCHNLVWAS----QVSDFVTS-----KTWTA 103 (335)
T ss_dssp HHHCSEEEESSTTSGG-GTEEETT-EEC---CHHHHHHHHHHHHTTCEEEEEEEECSS----SCCHHHHT-----SCCCH
T ss_pred HHhCCEEEECCccchH-HhCCCCC-ccC---cchhHHHHHHHHHCCCEEEEeeecccc----cCcHHHhc-----CCCCH
Confidence 337999998 77774 5556553 443 68899999999999999742 2232 11111000 0133
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----C-hHHH--HHHHHHHHHHHHhc-----CCCceEEEeCC
Q 019395 147 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A-LDTL--KSYYKAGYDAVRKY-----TSTAYVIMSNR 214 (341)
Q Consensus 147 ~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~-~~~~--~~~~~~~~~aIR~~-----~p~~~v~~~~~ 214 (341)
+...+.+.++++.+++||++ .|..||++|||....- + ..+. ..|...++++.|+. +|+..+++.+-
T Consensus 104 ~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~NDY 181 (335)
T 4f8x_A 104 KELTAVMKNHIFKTVQHFGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYNDY 181 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcEEEEecc
Confidence 46678888999999999998 6788999999986320 0 1111 16788889999999 99999999752
Q ss_pred C-CCCC--hhhh-------hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeec
Q 019395 215 L-GPAD--HKEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 284 (341)
Q Consensus 215 ~-~~~~--~~~~-------~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g 284 (341)
. .... ...+ .....+-+-+-++.|...... .+ ++.+.. .+..++.. |.||.|+|+-
T Consensus 182 n~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~-----p~----~~~~~~----~l~~~a~l-Gl~v~iTElD 247 (335)
T 4f8x_A 182 GIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGET-----PS----LADQLA----TKQAYIKA-NLDVAVTELD 247 (335)
T ss_dssp SCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC-----CC----HHHHHH----HHHHHHHT-TCEEEEEEEE
T ss_pred cccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCC-----CC----HHHHHH----HHHHHHHc-CCeeEEeecc
Confidence 1 1111 1111 111234567888999763211 01 122222 22233333 6689999998
Q ss_pred CCCCCCCC-C---HHHHHHHHHHHHHHHcc---CCCcEEEecccc
Q 019395 285 CEWNVKDA-S---KQDYQRFANAQLDVYGR---ATFGWAYWAHKC 322 (341)
Q Consensus 285 ~~~~~~~~-~---~~~~~~~~~~~~~~~~~---~~~Gw~~W~~k~ 322 (341)
........ + .+...+.+++.+.++-+ ...|-++|.+..
T Consensus 248 i~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~~~v~git~WG~~D 292 (335)
T 4f8x_A 248 VRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDD 292 (335)
T ss_dssp EEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBG
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHHHhCcCCeeEEEEEcCcc
Confidence 64421111 2 22233445555544432 456899998864
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.62 E-value=5.4e-07 Score=88.36 Aligned_cols=160 Identities=15% Similarity=0.213 Sum_probs=98.1
Q ss_pred HHHHHHHHHCCCCEEEcC-------cccccccCCCC--CCCc------ccchHHHHHHHHHHHHHcCCeEEEecCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP-------VGWWIANDPTP--PKPF------VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-------i~~~~~~~~~~--~~~~------~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~ 129 (341)
.+-++.|+++|+..||+| ..|...+.|.. +..+ .+...--+|+++++|++.|+.+++.+-...+.
T Consensus 94 ~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~~~ 173 (574)
T 2y2w_A 94 QDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGTRG 173 (574)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSSCC
T ss_pred HHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCCCC
Confidence 677888999999999997 23322222210 1111 11111227999999999999999998653211
Q ss_pred CCCCCCCCCCCCccCCchhHHHHHHH--------HHHHHHHHhCC-CC-ceeEEEeecCCCCC----CCChHHHHHHHHH
Q 019395 130 QNGNEHSATRDGFQEWGDSNVADTVA--------VIDFLAARYAN-RP-SLAAIELINEPLAP----GVALDTLKSYYKA 195 (341)
Q Consensus 130 ~~~~~~~g~~~~~~~w~~~~~~~~~~--------~~~~la~~y~~-~~-~v~~~el~NEP~~~----~~~~~~~~~~~~~ 195 (341)
......+++ .|..+-.+++. .| .|..|||.||+... ..+.+.+.+.+.+
T Consensus 174 -----------------~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~~ 236 (574)
T 2y2w_A 174 -----------------LKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVDK 236 (574)
T ss_dssp -----------------HHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHHH
Confidence 112222222 23344445542 34 57889999999752 2467899999999
Q ss_pred HHHHHHhcCCCceEEEeCCCCC-----CCh-hhhhhccCCCCcEEEEeeecCC
Q 019395 196 GYDAVRKYTSTAYVIMSNRLGP-----ADH-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 196 ~~~aIR~~~p~~~v~~~~~~~~-----~~~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
.+++||+++|+..|+..+.... ..+ ..+++.. ...-..++.|+|..
T Consensus 237 ~a~AiK~vdP~i~via~G~~~~~~p~~~~W~~~~l~~~-~~~vD~vs~H~Y~~ 288 (574)
T 2y2w_A 237 VAHAMKLAESGLELVACGSSGAYMPTFGTWEKTVLTKA-YENLDFVSCHAYYF 288 (574)
T ss_dssp HHHHHHHHCTTCEEEEECCSCTTSTTTTHHHHHHHHHH-GGGCCEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEecCCcccCccccchHHHHHHhc-ccCCCEEEEeecCC
Confidence 9999999999877665432111 011 2233321 23446899999953
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=2.7e-06 Score=82.21 Aligned_cols=201 Identities=16% Similarity=0.170 Sum_probs=113.7
Q ss_pred HHHHHHHHHCCC-CEEEcCcc------cccccCCCCCCC---cc---------cc--hHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGI-NAVRIPVG------WWIANDPTPPKP---FV---------GG--SSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~-N~VRlpi~------~~~~~~~~~~~~---~~---------~~--~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-++.+|++|. -.||+.=. |.....|....| .. .. .-..+|+++++|++-|..+|+.+
T Consensus 60 ~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~l 139 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGL 139 (488)
T ss_dssp HHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEE
Confidence 778888999999 99999421 221111100000 00 01 23459999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------CCCChHHHHHHHHH
Q 019395 124 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------PGVALDTLKSYYKA 195 (341)
Q Consensus 124 h~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------~~~~~~~~~~~~~~ 195 (341)
-...+ ..+...+.++.+...-+. ..|..|||.|||.. ...+.+++.+.+.+
T Consensus 140 N~g~~--------------------~~~~a~~~v~y~~~~~~~-~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~ 198 (488)
T 3vny_A 140 NLGKG--------------------TPENAADEAAYVMETIGA-DRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQR 198 (488)
T ss_dssp CTTTS--------------------CHHHHHHHHHHHHHHHCT-TTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHH
T ss_pred eCCCC--------------------CHHHHHHHHHHHhhcccC-CceeEEEecCcccccccCCccCCCCCHHHHHHHHHH
Confidence 75321 123444455544442122 37888999999973 12467788888889
Q ss_pred HHHHHHhcCCCceEEEeCCCCCCCh-hhhhhccCCCCcEEEEeeecCCCCcc-ccCccchhhhH--HHHhhhhhhhhhhh
Q 019395 196 GYDAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNLFSNN-FNGLNVQQNID--YVNNQRASDLGAVT 271 (341)
Q Consensus 196 ~~~aIR~~~p~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~H~Y~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~ 271 (341)
..++||+.+|+..++..+..+...+ ..+++. ....-..++.|+|.. ++. ....+.+..++ .........++...
T Consensus 199 ~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~-~~~~vd~vS~H~Y~~-g~~~~~~~t~~~ll~~~~~l~~~~~~~~~~~ 276 (488)
T 3vny_A 199 FFTAIRKRVPNAPFAGPDTAYNTKWLVPFADK-FKHDVKFISSHYYAE-GPPTDPSMTIERLMKPNPRLLGETAGLKQVE 276 (488)
T ss_dssp HHHHHHHHCTTCCEEEEEESSCGGGHHHHHHH-TGGGCSEEEEEEEEE-CCTTCTTCCHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCeEEeCCCCCCchhhHHHHHh-cCccCCEEEEeeCCC-CCCCCCCcCHHHHcCchHHHHHHHHHHHHHH
Confidence 9999999999866543321111122 334432 233345799999963 111 11111111111 00011111223333
Q ss_pred ccCCCceEEEeecCCCC
Q 019395 272 TSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 272 ~~~~~pv~vGE~g~~~~ 288 (341)
+..++|+++||++.+++
T Consensus 277 ~~~g~p~~lgEtnsa~~ 293 (488)
T 3vny_A 277 ADTGLPFRLTETNSCYQ 293 (488)
T ss_dssp HHHCCCEEEEEEEEEST
T ss_pred hcCCCCEEEeccccCCC
Confidence 44577899999987654
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=3e-06 Score=82.95 Aligned_cols=238 Identities=13% Similarity=0.101 Sum_probs=131.1
Q ss_pred HHHHHHCCCCEEEc--CcccccccCCCCCC-----CcccchHHHHHHHHHHHHHcCCeEE---EecCC-CCCCCCCCCCC
Q 019395 68 FKFLSSNGINAVRI--PVGWWIANDPTPPK-----PFVGGSSKVLDNAFDWAEKYGVKVI---VDLHA-APGSQNGNEHS 136 (341)
Q Consensus 68 ~~~i~~~G~N~VRl--pi~~~~~~~~~~~~-----~~~~~~l~~ld~~i~~a~~~gi~vi---ldlh~-~~g~~~~~~~~ 136 (341)
...+-...||.|.. .+.|. ..+|.++. .| .+...|++|++|+++||.|. |-.|. .|......
T Consensus 208 ~~~~~~~~Fn~it~eN~mKw~-~~e~~~g~~~~~~~~---~f~~aD~~v~~A~~ngi~vrGHtLvWhsq~P~W~~~~--- 280 (540)
T 2w5f_A 208 IKALILREFNSITCENEMKPD-ATLVQSGSTNTNIRV---SLNRAASILNFCAQNNIAVRGHTLVWHSQTPQWFFKD--- 280 (540)
T ss_dssp HHHHHHHHCSEEEESSTTSHH-HHEEEEEEETTEEEE---CCTTTHHHHHHHHHTTCEEEEEEEECSSSCCGGGGBT---
T ss_pred HHHHHHHhCCeeccccccccc-ccccCCCCcccccee---chhHHHHHHHHHHHCCCEEEEEEEEcCCCCchHHhcc---
Confidence 34444458999987 35553 22332221 12 26678999999999999974 22343 22211100
Q ss_pred CCCCCccCCc--hhHHHHHHHHHHHHHHHhCCC-C--ceeEEEeecCCCCCCC---------C-------hHHHH-----
Q 019395 137 ATRDGFQEWG--DSNVADTVAVIDFLAARYANR-P--SLAAIELINEPLAPGV---------A-------LDTLK----- 190 (341)
Q Consensus 137 g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~-~--~v~~~el~NEP~~~~~---------~-------~~~~~----- 190 (341)
+ ......+. ....++..++++.++.||+++ | .|..||++|||..... . ...|.
T Consensus 281 ~-~~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~ 359 (540)
T 2w5f_A 281 N-FQDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGD 359 (540)
T ss_dssp T-SSTTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSS
T ss_pred C-cccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCc
Confidence 0 00001121 345677888999999999874 4 4999999999986320 0 12332
Q ss_pred -HHHHHHHHHHHhcCCC-ceEEEeCCCCCCCh---hh---hhhcc---CCCCcEEEEeeecCCCCccccCccchhhhHHH
Q 019395 191 -SYYKAGYDAVRKYTST-AYVIMSNRLGPADH---KE---LLSFA---SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYV 259 (341)
Q Consensus 191 -~~~~~~~~aIR~~~p~-~~v~~~~~~~~~~~---~~---~~~~~---~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~ 259 (341)
.|+..+++..|+.+|+ ..+++.+ +..... .. +.+.+ .--+-+-++.|.-.... .+ . .++.+
T Consensus 360 ~~~i~~aF~~Ar~~dP~~a~L~~ND-yn~~~~~k~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~-~~--~----~~~~~ 431 (540)
T 2w5f_A 360 NKFIEKAFTYARKYAPANCKLYYND-YNEYWDHKRDCIASICANLYNKGLLDGVGMQSHINADMN-GF--S----GIQNY 431 (540)
T ss_dssp TTHHHHHHHHHHHHSCTTCEEEEEE-SSTTSHHHHHHHHHHHHHHHHTTCCCEEEECCEEESCSS-ST--T----CHHHH
T ss_pred HHHHHHHHHHHHHhCCccceEEEEe-cccccccHHHHHHHHHHHHHhCCcccEEEEeeEecCCCC-CC--C----CHHHH
Confidence 6889999999999997 7777764 221111 11 21111 11344556678653210 00 0 11222
Q ss_pred HhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHc--------cCCCcEEEeccccCCCCC
Q 019395 260 NNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYG--------RATFGWAYWAHKCEANHW 327 (341)
Q Consensus 260 ~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Gw~~W~~k~~~~~W 327 (341)
.. .+..++. .|.||.|+|+.........+.+...++++..+.++. ....|-++|.+... ..|
T Consensus 432 ~~----~l~~~a~-~Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D~-~sW 501 (540)
T 2w5f_A 432 KA----ALQKYIN-IGCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPNDA-NTW 501 (540)
T ss_dssp HH----HHHHHHT-TTSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSSTT-SCT
T ss_pred HH----HHHHHHh-cCCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCceeEEEEEcCCCC-Ccc
Confidence 22 2223333 367899999987543222234444455555555542 13468899998643 445
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.38 E-value=5.1e-06 Score=75.89 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=94.0
Q ss_pred HHHHHHHHHCCCCEEEcCc-ccccc-cCCCC----CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPV-GWWIA-NDPTP----PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi-~~~~~-~~~~~----~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
+++|+.||++|++.|=|-- ++..+ .-|+. ...+ ....+.|+.+++.|+++||+|.+.|+..+.. ++.+
T Consensus 57 ~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~-~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~----W~~~- 130 (340)
T 4h41_A 57 DLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCY-MPSVDLVDMYLRLAEKYNMKFYFGLYDSGRY----WDTG- 130 (340)
T ss_dssp HHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCC-CCSBCHHHHHHHHHHHTTCEEEEECCBCSHH----HHHS-
T ss_pred HHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCcc-CCcccHHHHHHHHHHHhCCeEEEecCCChhh----cCCC-
Confidence 8999999999999885522 11100 00110 0111 1235779999999999999999998754210 1100
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhC-CCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYA-NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~-~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+.....+....+++++.++|. ++|++.||-|-||+... ......+++.+.+.++++.|+.++++++
T Consensus 131 ------d~~~e~e~~~~~i~El~~~Yg~~h~af~GWYi~~Ei~~~---~~~~~~~~~~l~~~lk~ls~~lp~~ISp 197 (340)
T 4h41_A 131 ------DLSWEIEDNKYVIDEVWKMYGEKYKSFGGWYISGEISRA---TKGAIDAFRAMGKQCKDISNGLPTFISP 197 (340)
T ss_dssp ------CGGGGHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCSSC---CTTHHHHHHHHHHHHHHHTTSCCEEECC
T ss_pred ------CHHHHHHHHHHHHHHHHHHhhccCCCeeEEEeccccCch---hhhHHHHHHHHHHHHHHhcCCCceEEee
Confidence 112345667788999999997 58999999999999742 2345778889999999999999998875
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.35 E-value=3.1e-06 Score=81.46 Aligned_cols=156 Identities=13% Similarity=0.192 Sum_probs=97.0
Q ss_pred HHHHHHHHHCCCCEEEcC-------cccccccCCC--CCCCc------ccchHHHHHHHHHHHHHcCCeEEEecCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP-------VGWWIANDPT--PPKPF------VGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGS 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-------i~~~~~~~~~--~~~~~------~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~ 129 (341)
.+-++.|++++.-.+|+| ..|...+.|. .+... .+..-=-+++++++|++.|..+++.+-...
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~fG~~Ef~~~~e~~gaep~~~vN~G~-- 148 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRFGTDEFIEYCREIGAEPYISINMGT-- 148 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEECCCSS--
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCCCHHHHHHHHHHhCCeEEEEEECCC--
Confidence 677888999999999998 2343323331 11100 011011379999999999999999875421
Q ss_pred CCCCCCCCCCCCccCCchhHHHHHHHHHHHHH-----------HHhC-CCC-ceeEEEeecCCCCC----CCChHHHHHH
Q 019395 130 QNGNEHSATRDGFQEWGDSNVADTVAVIDFLA-----------ARYA-NRP-SLAAIELINEPLAP----GVALDTLKSY 192 (341)
Q Consensus 130 ~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la-----------~~y~-~~~-~v~~~el~NEP~~~----~~~~~~~~~~ 192 (341)
| ..+..+++++.+. ...+ ..| .|-.|||.||+..+ ..+.+.+.+.
T Consensus 149 -------g-----------~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~~t~e~Y~~~ 210 (504)
T 3ug3_A 149 -------G-----------TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGHMTADEYARA 210 (504)
T ss_dssp -------C-----------CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTCCCHHHHHHH
T ss_pred -------C-----------CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccCCCHHHHHHH
Confidence 1 1233344444332 2221 123 57779999999853 2467889999
Q ss_pred HHHHHHHHHhcCCCceEEEeCCCCCCCh-hhhhhccCCCCcEEEEeeecCC
Q 019395 193 YKAGYDAVRKYTSTAYVIMSNRLGPADH-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 193 ~~~~~~aIR~~~p~~~v~~~~~~~~~~~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
+.+.+++||+.+|+..|+..++.. ..| ..+++. ....-..++.|+|..
T Consensus 211 ~~~~a~Aik~~dP~I~lia~G~~~-~~W~~~~l~~-~~~~vD~vs~H~Y~~ 259 (504)
T 3ug3_A 211 AKEYTKWMKVFDPTIKAIAVGCDD-PIWNLRVLQE-AGDVIDFISYHFYTG 259 (504)
T ss_dssp HHHHHHHHHHHCTTCEEEECCCSC-HHHHHHHHHH-HTTTCSEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEECCCC-cchhHHHHHh-cccCCCEEEEeeCCC
Confidence 999999999999997766543211 112 123332 134556899999964
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.31 E-value=0.00012 Score=71.01 Aligned_cols=204 Identities=13% Similarity=0.085 Sum_probs=113.8
Q ss_pred HHHHHHHHHHcCC-eEEEecCCCCCCC--CCCCCC--CCCCCccCCchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecC
Q 019395 105 LDNAFDWAEKYGV-KVIVDLHAAPGSQ--NGNEHS--ATRDGFQEWGDSNVADTVAVIDFLAARYANR-PSLAAIELINE 178 (341)
Q Consensus 105 ld~~i~~a~~~gi-~vildlh~~~g~~--~~~~~~--g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NE 178 (341)
...+++.|+++|. +++......|+.. |+.... |. .....++..+.+++++..+++.|+.. -.|.++.+.||
T Consensus 110 ~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~~~~~~g~---~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNE 186 (507)
T 3clw_A 110 QQWFMKAARERGMNNFLFFTNSAPYFMTRSASTVSTDQD---CINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNE 186 (507)
T ss_dssp HHHHHHHHHHTTCCCEEEECSSCCGGGSSSSSSSCCCSS---SCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSC
T ss_pred HHHHHHHHHHcCCCeEEEeCCCCcHHhccCCCccCCCCc---cccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecC
Confidence 4468888888888 5666666666542 221111 11 00112566777888888888888754 35888899999
Q ss_pred C--CCC--------CCChHHHHHHHHHHHHHHHhcCCCceEEEeCC--CC-----------CCCh-hhhhhc-----cCC
Q 019395 179 P--LAP--------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR--LG-----------PADH-KELLSF-----ASG 229 (341)
Q Consensus 179 P--~~~--------~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~--~~-----------~~~~-~~~~~~-----~~~ 229 (341)
| ... ..+.++..+|++.+..++++.+++..|++.+. +. ...+ ..+.+. ..+
T Consensus 187 P~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~~~g~~~kI~~~d~~~~~~~~d~~n~~~~~~~~~~~~~d~~a~~yv~g 266 (507)
T 3clw_A 187 PNGQWHANSFQEGSFATKADLYRMVEELDKAISEAQIDTKILIPEVGDMKYLFEIDSIAKTPDDIIHSMFYKDGQYSVLK 266 (507)
T ss_dssp TTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHHHHTCSCEEEEEEESSGGGGSCCCSCTTCCCCHHHHHHSTTSTTCCTT
T ss_pred CccccccCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEeccccccccccccccccchhhHHHhhcCcchHhhhhc
Confidence 9 421 14567889999999999999999887777621 11 0111 112211 111
Q ss_pred CCc--EEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhcc--CCCceEEEeecC-CCC---CCCCCH----HHH
Q 019395 230 LSR--VVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTS--NGPLTFVGEWTC-EWN---VKDASK----QDY 297 (341)
Q Consensus 230 ~~~--~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~pv~vGE~g~-~~~---~~~~~~----~~~ 297 (341)
..+ .++.+|.|.... ....+..++. .+..++++ .+++++++|.++ ..+ ..+... +.-
T Consensus 267 ~~~~~diia~H~Y~~~~-------~~~~l~~~r~----~~~~~a~~~~~~k~lw~TE~~~~g~~~~~~~~~~~~~~~~~a 335 (507)
T 3clw_A 267 FKNLFNCVAAHDYWSAY-------PATLLVDIRN----RIHKELSANGHNTKFWASEYCILEKNEEITMPASPERSINLG 335 (507)
T ss_dssp CTTEEEEEEECCTTCSS-------SHHHHHHHHH----HHHHHHHTTSSCCEEEECCCCSCCCCTTTCSSSCHHHHHHHH
T ss_pred cccccceEEEeeCCCCC-------CcchhhhHHH----HHHHHHhhccCCCceEEeeeccCCCCcccccCCCCcccHHHH
Confidence 122 358999995311 0112222221 12222333 477899999986 110 011111 122
Q ss_pred HHHHHHHHHHHcc-CCCcEEEecccc
Q 019395 298 QRFANAQLDVYGR-ATFGWAYWAHKC 322 (341)
Q Consensus 298 ~~~~~~~~~~~~~-~~~Gw~~W~~k~ 322 (341)
..+.+.....+.. ...+|.+|..-.
T Consensus 336 ~~~a~~i~~~l~~~~~~a~~~Wn~~~ 361 (507)
T 3clw_A 336 LYVARIIHNDLTLANASAWQWWTAVS 361 (507)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEESEE
T ss_pred HHHHHHHHHHHHhCCCcEEEEchhhc
Confidence 2344444444555 667999998875
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.31 E-value=3.8e-06 Score=81.32 Aligned_cols=159 Identities=14% Similarity=0.142 Sum_probs=94.1
Q ss_pred HHHHHHHHHCCCCEEEcCc-------ccccccCCC--CCCCcccchHH--------HHHHHHHHHHHcCCeEEEecCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPV-------GWWIANDPT--PPKPFVGGSSK--------VLDNAFDWAEKYGVKVIVDLHAAP 127 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi-------~~~~~~~~~--~~~~~~~~~l~--------~ld~~i~~a~~~gi~vildlh~~~ 127 (341)
.+-++.|+++|+-.||+|= .|...+.|. .+..++ ..|. -+++++++|++.|..+++.+....
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~-~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~g~ 132 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVN-THWGGVIENNHFGTHEFMMLCELLGCEPYISGNVGS 132 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEE-TTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECCSS
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccC-CCCCcccccCccCHHHHHHHHHHcCCeEEEEEECCC
Confidence 6778889999999999973 233222331 111111 0121 248999999999999999886532
Q ss_pred CCCCCCCCCCCCCCccCCchhHHHHHHHH--------HHHHHHHhCC-CC-ceeEEEeecCCCCC--CCChHHHHHHHHH
Q 019395 128 GSQNGNEHSATRDGFQEWGDSNVADTVAV--------IDFLAARYAN-RP-SLAAIELINEPLAP--GVALDTLKSYYKA 195 (341)
Q Consensus 128 g~~~~~~~~g~~~~~~~w~~~~~~~~~~~--------~~~la~~y~~-~~-~v~~~el~NEP~~~--~~~~~~~~~~~~~ 195 (341)
| . ......++++ |..+-.+++. .| .|-.|||.|||... ..+.+.+.+.+.+
T Consensus 133 g---------~--------~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~~ 195 (496)
T 2vrq_A 133 G---------T--------VQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYRQ 195 (496)
T ss_dssp C---------C--------HHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHHH
T ss_pred C---------c--------HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHHH
Confidence 1 0 0111222222 2334344432 23 47789999999752 2456788899999
Q ss_pred HHHHHHhc-CCCceEEEeCCCC-CCCh-hhhhhccCCCCcEEEEeeecCC
Q 019395 196 GYDAVRKY-TSTAYVIMSNRLG-PADH-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 196 ~~~aIR~~-~p~~~v~~~~~~~-~~~~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
..++||++ +|+..++..++.. ...| ..+++.. ...-..++.|+|..
T Consensus 196 ~a~a~k~~~dp~i~~ia~G~~~~~~~W~~~~l~~~-~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 196 FQTYLRNYGDNKLHKIACGANTADYHWTEVLMKQA-APFMHGLSLHYYTV 244 (496)
T ss_dssp HHHTCCCCTTCCCEEEEEEEETTCHHHHHHHHHHH-GGGCSEEEEEEEEC
T ss_pred HHHHHHhCCCCCeEEEEeCCCCCCcchHHHHHHhC-CCCCCEEEEeecCC
Confidence 99999999 7766555432111 1112 2233321 22345799999953
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=98.24 E-value=7.8e-05 Score=72.09 Aligned_cols=232 Identities=17% Similarity=0.181 Sum_probs=128.3
Q ss_pred HHCCCCEEEcCcccc-------cccCCCCC----CCcccchH--HHHHHHHHHHHHc---CCeEEEecCCCCCCC--CCC
Q 019395 72 SSNGINAVRIPVGWW-------IANDPTPP----KPFVGGSS--KVLDNAFDWAEKY---GVKVIVDLHAAPGSQ--NGN 133 (341)
Q Consensus 72 ~~~G~N~VRlpi~~~-------~~~~~~~~----~~~~~~~l--~~ld~~i~~a~~~---gi~vildlh~~~g~~--~~~ 133 (341)
..+|++.+|++|+=- ...+ .++ ..|+-+.- ..+-.+++.|+++ +|+++......|+.. |+.
T Consensus 112 ~Glglsi~R~~IG~~d~s~~~ysy~d-~~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~wMk~n~~ 190 (497)
T 2nt0_A 112 EGIGYNIIRVPMASCDFSIRTYTYAD-TPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGA 190 (497)
T ss_dssp TTTCCCEEEEEESCCSSSSSCCCSCC-STTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCS
T ss_pred CCCceEEEEEeecCCCCCCCCccccC-CCCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHHHhcCCC
Confidence 458999999999621 1111 111 12221111 2455677778775 699999988888643 222
Q ss_pred CC-CCCCCCccCCchhHHHHHHHHHHHHHHHhCCC-CceeEEEeecCCCCC----------CCChHHHHHHHH-HHHHHH
Q 019395 134 EH-SATRDGFQEWGDSNVADTVAVIDFLAARYANR-PSLAAIELINEPLAP----------GVALDTLKSYYK-AGYDAV 200 (341)
Q Consensus 134 ~~-~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~-~~v~~~el~NEP~~~----------~~~~~~~~~~~~-~~~~aI 200 (341)
.. .|...+.+ .+++.+.+++++..+++.|+.. -.|.++.+.|||... ..+.++..+|.+ .+-.++
T Consensus 191 ~~ggG~L~~~~--~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L 268 (497)
T 2nt0_A 191 VNGKGSLKGQP--GDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTL 268 (497)
T ss_dssp SSSSCBBSSCT--TSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHH
T ss_pred cCCCCccCCcc--chhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 11 12110000 0136677777777777777654 247889999999752 134577888888 567788
Q ss_pred HhcC-CCceEEEeCCCC--CCCh-hhhhhcc-CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCC
Q 019395 201 RKYT-STAYVIMSNRLG--PADH-KELLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 275 (341)
Q Consensus 201 R~~~-p~~~v~~~~~~~--~~~~-~~~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
++.+ +++.|++.+... ..++ ...+..+ ....-..+.+|.|.... ......+..+. .+..+
T Consensus 269 ~~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a~~~v~~ia~H~Y~~~~-----~~~~~~l~~~~----------~~~p~ 333 (497)
T 2nt0_A 269 ANSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-----APAKATLGETH----------RLFPN 333 (497)
T ss_dssp HTSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSC-----CCHHHHHHHHH----------HHCTT
T ss_pred HhcCCCCceEEEecCCCCcchhHHHHHhcChhhHhhcceEEEEecCCCC-----CChHHHHHHHH----------HHCCC
Confidence 8876 466777765321 1111 1112110 11223489999995321 01111122221 12346
Q ss_pred CceEEEeecCCCC----C-CCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 276 PLTFVGEWTCEWN----V-KDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 276 ~pv~vGE~g~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
++++++|.+.... . ....-..-..+.+..+..+.....+|.+|..-
T Consensus 334 k~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~Wnl~ 384 (497)
T 2nt0_A 334 TMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLA 384 (497)
T ss_dssp SEEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESE
T ss_pred CcEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEeeeee
Confidence 7899999875421 0 11233334456666666666667799999875
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.00012 Score=69.74 Aligned_cols=225 Identities=11% Similarity=0.103 Sum_probs=126.0
Q ss_pred HCCCCEEEcCccccccc------CCCCC----CCcc-cchHHHHHHHHHHHHHc--CCeEEEecCCCCCCCC--CCCCCC
Q 019395 73 SNGINAVRIPVGWWIAN------DPTPP----KPFV-GGSSKVLDNAFDWAEKY--GVKVIVDLHAAPGSQN--GNEHSA 137 (341)
Q Consensus 73 ~~G~N~VRlpi~~~~~~------~~~~~----~~~~-~~~l~~ld~~i~~a~~~--gi~vildlh~~~g~~~--~~~~~g 137 (341)
.+|++.+|++|+=-.+- ++.++ ..|+ ......+-.+++.|+++ +|+++......|+... +....|
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~g 159 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVDSSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNGG 159 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBSC
T ss_pred CCceEEEEEeecCCCCCCCcccccCCCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCCC
Confidence 58999999999621110 00000 1121 11223445678888884 6889888888886532 211111
Q ss_pred CCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChHHHHHHHH-HHHHHHHhcCC-Cce
Q 019395 138 TRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYK-AGYDAVRKYTS-TAY 208 (341)
Q Consensus 138 ~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~~------~~~~~~~~~~~-~~~~aIR~~~p-~~~ 208 (341)
+ ...++..+.+++++..+++.|+.+- .|.++.+.|||.... .+.++..+|.+ .+-.++++.+. ++.
T Consensus 160 ---g--~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~k 234 (447)
T 2wnw_A 160 ---G--KLRRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEME 234 (447)
T ss_dssp ---C--BBCGGGHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTCE
T ss_pred ---C--cCCHHHHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCce
Confidence 1 1114566667777766766666532 478888999999631 45678889887 66778998876 566
Q ss_pred EEEeCCCCCCChhhhhhccCC-----CCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEee
Q 019395 209 VIMSNRLGPADHKELLSFASG-----LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 283 (341)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~ 283 (341)
|++.+.... ....+...... ..-..+.+|.|..- ....+..+. .+..+++++++|.
T Consensus 235 I~~~D~n~~-~~~~~~~~il~d~~a~~~v~~ia~H~Y~g~--------~~~~l~~~~----------~~~p~k~lw~TE~ 295 (447)
T 2wnw_A 235 IYIWDHDKD-GLVDWAELAFADEANYKGINGLAFHWYTGD--------HFSQIQYLA----------QCLPDKKLLFSEG 295 (447)
T ss_dssp EEEEEEEGG-GHHHHHHHHTTSHHHHHHCCEEEEECTTCC--------CHHHHHHHH----------HHCTTSEEEEEEC
T ss_pred EEEeCCCcc-chhhHHHHHhcCHhHHhhCCEEEEEccCCC--------cHHHHHHHH----------HHCCCCeEEEecc
Confidence 776653221 11112111011 11247999999421 011122211 1224678999998
Q ss_pred cCC-CCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 284 TCE-WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 284 g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
+.. +..++.....+..+.+..+..+.....+|.+|..-
T Consensus 296 ~~~~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ 334 (447)
T 2wnw_A 296 CVPMESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLL 334 (447)
T ss_dssp CCBCCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESE
T ss_pred ccCCcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhh
Confidence 753 21111011123455566665566677899999876
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=3.8e-05 Score=71.91 Aligned_cols=206 Identities=15% Similarity=0.117 Sum_probs=117.0
Q ss_pred CCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCC--CCCCCCCCCCccCCchhHHH
Q 019395 74 NGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN--GNEHSATRDGFQEWGDSNVA 151 (341)
Q Consensus 74 ~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~--~~~~~g~~~~~~~w~~~~~~ 151 (341)
+|++.+|++|+-- ...++. -..+++.|+++|++++......|+... +....| +. ..+++.+
T Consensus 45 ~g~s~~R~~ig~~-------~~~~~~-----~~~~~k~A~~~~~~i~aspWSpP~wMk~n~~~~~~---g~--L~~~~~~ 107 (383)
T 2y24_A 45 IGLSIMRVRIDPD-------SSKWNI-----QLPSARQAVSLGAKIMATPWSPPAYMKSNNSLING---GR--LLPANYS 107 (383)
T ss_dssp CCCCEEEEEECSS-------GGGGGG-----GHHHHHHHHHTTCEEEEEESCCCGGGBTTSSSBSC---CB--BCGGGHH
T ss_pred ccceEEEEecCCc-------cccccc-----chHHHHHHHhcCCeEEEecCCCcHHHhCCCCCCCC---Cc--CCHHHHH
Confidence 8999999999631 012221 145677888999999988888776432 111101 11 2256777
Q ss_pred HHHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC-CCCh-hh
Q 019395 152 DTVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG-PADH-KE 222 (341)
Q Consensus 152 ~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~-~~~~-~~ 222 (341)
.+++++..+++.|++.- .|.++.+.|||.... .+.++.++|.+.....++ +..|++.+.+. ..++ ..
T Consensus 108 ~yA~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~----~~kI~~~d~~~~d~~~~~~ 183 (383)
T 2y24_A 108 AYTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFG----SLKVIVAESLGFNPALTDP 183 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGST----TSEEEEEEETTCCGGGTHH
T ss_pred HHHHHHHHHHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhc----CCEEEeecccccchhcchh
Confidence 77777777778887542 478889999998632 245666777665433322 25566553211 1111 11
Q ss_pred hhhcc-CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHH
Q 019395 223 LLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFA 301 (341)
Q Consensus 223 ~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~ 301 (341)
.+..+ ....-..+.+|.|..-. . .... .+..+++++++|.++........-..-..+.
T Consensus 184 ~l~d~~a~~~v~~i~~H~Y~~~~--------~-~~~~------------~~~~~k~lw~TE~~~~~~~~~~~w~~~~~~a 242 (383)
T 2y24_A 184 VLKDSDASKYVSIIGGHLYGTTP--------K-PYPL------------AQNAGKQLWMTEHYVDSKQSANNWTSAIEVG 242 (383)
T ss_dssp HHTCHHHHTTCCEEEEECTTSCC--------C-CCHH------------HHHTTCEEEEEEECSCTTSCTTCHHHHHHHH
T ss_pred hccCHhHHhhccEEEEecCCCCc--------c-cchh------------hhcCCCeEEEeccccCCCcccCchhHHHHHH
Confidence 11111 11223579999995310 0 0011 1223678999998864221112333334556
Q ss_pred HHHHHHHccCCCcEEEeccc
Q 019395 302 NAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 302 ~~~~~~~~~~~~Gw~~W~~k 321 (341)
+.....+..+..+|.+|..-
T Consensus 243 ~~i~~~l~~~~~~~~~W~~~ 262 (383)
T 2y24_A 243 TELNASMVSNYSAYVWWYIR 262 (383)
T ss_dssp HHHHHHHHTTCSEEEEEESB
T ss_pred HHHHHHHhcCccEEEEeecc
Confidence 66666666556699999874
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=98.06 E-value=0.00043 Score=61.13 Aligned_cols=168 Identities=14% Similarity=0.069 Sum_probs=100.7
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCC---------------CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTP---------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~---------------~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g 128 (341)
+.-|+...+.|+|+|||. +++=.+..|.+ ++.+.-..-..|.++++.|++||++||+.=. +
T Consensus 40 D~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~~evdgr~~L~elf~aAk~hd~~ViLSSW-Y-- 116 (393)
T 3gyc_A 40 DQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDMNEVQVQPNLNLFLSKCKERDIKVGLSSW-Y-- 116 (393)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSCEEECCTTHHHHHHHHHHHTTCEEEEECC-C--
T ss_pred HHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCCceechHHHHHHHHHHHHHcCCEEEEehh-h--
Confidence 888999999999999993 22211111110 0111113567899999999999999999755 3
Q ss_pred CCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------------CCChHHHHHH
Q 019395 129 SQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------------GVALDTLKSY 192 (341)
Q Consensus 129 ~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------------~~~~~~~~~~ 192 (341)
|+. .+..... ..=.....+...+.++.|.++ +=...|...||-||-... ....+.++.+
T Consensus 117 -QQs--pseal~a-~~R~e~lA~aw~~lLdfi~~~-GL~drIAyVELhNEv~~~~la~~~~~~~~~vg~~a~~~e~l~~~ 191 (393)
T 3gyc_A 117 -RLD--VDEVCLK-LDTPEKLADCWLTILRSIEED-GLLDTILYVDLCNEWPGDSWAPFFAKTYPNVGWGNWYKEESLRW 191 (393)
T ss_dssp -CCB--TTCGGGG-CCSHHHHHHHHHHHHHHHHHT-TCGGGEEEEESSTTTTCTTTCHHHHTTCTTTCTTCTTSHHHHHH
T ss_pred -hcC--HHHHHhh-hccHHHHHHHHHHHHHHHHHc-cchhceeeEeeeccccCcccccccCccccccccchhhhHhhhHH
Confidence 111 1110100 000012233334444555442 223588999999995541 1223589999
Q ss_pred HHHHHHHHHhcCCCceEEEeCCCCCCChhhhhhccCCCCcEEEEeeecCCC
Q 019395 193 YKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLF 243 (341)
Q Consensus 193 ~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~ 243 (341)
++++++++|+..|+.+|..+- .-.+...+-+. +.+-...+++|..-.+
T Consensus 192 lee~v~~lR~~hP~lpvt~Sy--T~~~~~~~~~~-d~sfldfle~h~wm~~ 239 (393)
T 3gyc_A 192 MKTSLEKMRQVYPDMPFLYSF--DHGDVKKYEEV-DCSFLDLYEHHIWMAQ 239 (393)
T ss_dssp HHHHHHHHHTTCTTSCEECCB--CCSCTTHHHHS-CCTTCSSEEBCCCGGG
T ss_pred HHHHHHHHHHhCCCCeeeeee--ccchhhhhhcc-CchHHhhhhhHHHhhc
Confidence 999999999999999998762 11223334333 4455567888877443
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00031 Score=64.37 Aligned_cols=223 Identities=15% Similarity=0.148 Sum_probs=124.1
Q ss_pred HCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEE---EecCC-CCCCCCC-CCCCCCCCCccCC
Q 019395 73 SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHA-APGSQNG-NEHSATRDGFQEW 145 (341)
Q Consensus 73 ~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi---ldlh~-~~g~~~~-~~~~g~~~~~~~w 145 (341)
..-||.|-. .+.|. .++|.++ .|+ +...|++|++|+++||.|- |=.|. .|..... .+..| ....+
T Consensus 35 ~~~Fn~it~EN~mKw~-~~ep~~G-~~~---f~~aD~~v~~a~~ngi~vrGHtLvWh~q~P~W~~~~~d~~g---~~~~~ 106 (341)
T 3ro8_A 35 KMHHDVVTAGNAMKPD-ALQPTKG-NFT---FTAADAMIDKVLAEGMKMHGHVLVWHQQSPAWLNTKKDDNN---NTVPL 106 (341)
T ss_dssp HHHCSEEEESSTTSHH-HHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECSSSCCGGGTEEECTTS---CEEEC
T ss_pred HHhCCEEEECcccchh-HhcCCCC-ccc---hHHHHHHHHHHHhCCCEEEeccccCcccCCHHHhccCcccc---ccCCC
Confidence 445898887 56664 4555543 443 6889999999999999974 22332 1221110 00000 00012
Q ss_pred c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----------ChHHHH-----HHHHHHHHHHHhc-----C
Q 019395 146 G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----------ALDTLK-----SYYKAGYDAVRKY-----T 204 (341)
Q Consensus 146 ~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----------~~~~~~-----~~~~~~~~aIR~~-----~ 204 (341)
. ....++..++++.+++||++ .|..||++|||..... ....|. .|...++++-|+. +
T Consensus 107 s~~~l~~~~~~hI~~vv~rYkg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~pd 184 (341)
T 3ro8_A 107 GRDEALDNLRTHIQTVMKHFGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDENPS 184 (341)
T ss_dssp CHHHHHHHHHHHHHHHHHHHGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHHHHHHcCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhcccCCC
Confidence 2 34567788999999999998 5778999999975211 011222 4778888888997 6
Q ss_pred CCceEEEeCCCCCCCh----------hhhhhc-------cCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhh
Q 019395 205 STAYVIMSNRLGPADH----------KELLSF-------ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDL 267 (341)
Q Consensus 205 p~~~v~~~~~~~~~~~----------~~~~~~-------~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (341)
|+..+++-+-. .... ..+... ..+-+-+-++.|.-... ++ +.+.. .+
T Consensus 185 p~akL~~NDYn-~~~~~k~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~~-------~~----~~~~~----~l 248 (341)
T 3ro8_A 185 WNIKLYYNDYN-EDNQNKATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNINT-------NP----DNVKL----SL 248 (341)
T ss_dssp CCCEEEEEESC-TTSHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETTC-------CH----HHHHH----HH
T ss_pred CCcEEEEecCC-CcccchHHHHHHHHHHHHHhhhcccCCCCccceeeechhccCCC-------CH----HHHHH----HH
Confidence 78888886521 1111 111110 12356678889964321 11 12221 22
Q ss_pred hhhhccCCCceEEEeecCCCCCCC-CCHH---HHHHHHHHHHHHHcc---CCCcEEEecccc
Q 019395 268 GAVTTSNGPLTFVGEWTCEWNVKD-ASKQ---DYQRFANAQLDVYGR---ATFGWAYWAHKC 322 (341)
Q Consensus 268 ~~~~~~~~~pv~vGE~g~~~~~~~-~~~~---~~~~~~~~~~~~~~~---~~~Gw~~W~~k~ 322 (341)
..++.. |.||.|+|+=....... .+.+ .....++..+.+|.+ ...|-++|.+..
T Consensus 249 ~~~a~l-Gl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~~~v~giT~WG~~D 309 (341)
T 3ro8_A 249 EKFISL-GVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHADHIARVTFWGMDD 309 (341)
T ss_dssp HHHHTT-TCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTGGGEEEEEEC----
T ss_pred HHHHHc-CCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCceEEEEeCCCC
Confidence 333333 67899999965432111 1111 223445555665543 345899998763
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0039 Score=56.45 Aligned_cols=206 Identities=14% Similarity=0.076 Sum_probs=118.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-.+.|++.|++.||| | ++ + ..++..++..||+|+|++...... .
T Consensus 18 ~~Vv~llks~gi~~VRl---Y----~~---D----------~~vL~Al~~sgi~V~lGV~n~~l~------------~-- 63 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRI---Y----YP---H----------TNVFNALKGSNIEIILDVPNQDLE------------A-- 63 (323)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SC---C----------HHHHHHHTTCCCEEEEEECGGGTG------------G--
T ss_pred HHHHHHHHhCCCCeEEe---c----CC---C----------HHHHHHHHhcCCeEEEeccccchh------------h--
Confidence 45566779999999998 2 11 1 378888999999999998753100 0
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChHHHHHHHHHHHHHHHhcCC--CceEEEeCC---CC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDTLKSYYKAGYDAVRKYTS--TAYVIMSNR---LG 216 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p--~~~v~~~~~---~~ 216 (341)
. .. .+...++++.-...|.....|.++-+-||+...+. ....+...++.+.+++++.+= +.+|..... +.
T Consensus 64 l-a~-~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl~~~IkVsT~~~~~v~~ 141 (323)
T 3ur8_A 64 L-AN-PSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGLQNQIKVSTSTYSGLLT 141 (323)
T ss_dssp G-GS-HHHHHHHHHHHTGGGTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGEE
T ss_pred h-hh-HHHHHHHHHHHHhhhCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCCCCCceeeeeeeccccc
Confidence 0 12 44555566666667766678888889999976332 267889999999999998874 245554321 22
Q ss_pred CCC----------h----hhhhhcc-CCCCcEEEEeeecCCCCccccCcc---------------chhhhHHHHhhhhhh
Q 019395 217 PAD----------H----KELLSFA-SGLSRVVIDVHYYNLFSNNFNGLN---------------VQQNIDYVNNQRASD 266 (341)
Q Consensus 217 ~~~----------~----~~~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 266 (341)
.+. . ..+++++ .....+++.+++|..+.......+ .....+.+... .
T Consensus 142 ~s~pPS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~yPyf~~~~~~~~i~l~yAlf~~~~d~~~~Y~nlfDa~~Da---~ 218 (323)
T 3ur8_A 142 NTYPPRDSIFREEYKSFINPIIGFLARHNLPLLANIYPYFGHIDNTNAVPLSYALFNQQRRNDTGYQNLFDALVDS---M 218 (323)
T ss_dssp CCSSGGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHHTCCSSCCTTSCSSHHHHHHHH---H
T ss_pred cCCCCCcceechhHHHHHHHHHHHHHhcCCeeEEecchhhhhccCCCCCChhhhccccCCCccchHHHHHHHHHHH---H
Confidence 111 1 1122221 234556666666643311000000 11111111111 1
Q ss_pred hhhhhc--cCCCceEEEeecCCCCC-CCCCHHHHHHHHHHHHHHHc
Q 019395 267 LGAVTT--SNGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVYG 309 (341)
Q Consensus 267 ~~~~~~--~~~~pv~vGE~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 309 (341)
...+.+ ..+++|+|||-|=++.+ ..++.+..++|++..+....
T Consensus 219 ~~Al~~~g~~~~~v~vsEtGWPs~G~~~as~~na~~y~~~li~~~~ 264 (323)
T 3ur8_A 219 YFATEKLGGQNIEIIVSESGWPSEGHPAATLKNARTYYTNLINHVK 264 (323)
T ss_dssp HHHHHTTTCTTCCEEEEEECCCSSSBTTBCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCceEEeccccCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 112233 34578999999844332 34567778888887775543
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00046 Score=66.76 Aligned_cols=125 Identities=17% Similarity=0.158 Sum_probs=72.0
Q ss_pred HHHHHHHHHhCC-CCceeEEEeecCCCCC--C--C------ChHHHHHHHHHHHHHHHhcC---CCceEEEe-CCCCCC-
Q 019395 155 AVIDFLAARYAN-RPSLAAIELINEPLAP--G--V------ALDTLKSYYKAGYDAVRKYT---STAYVIMS-NRLGPA- 218 (341)
Q Consensus 155 ~~~~~la~~y~~-~~~v~~~el~NEP~~~--~--~------~~~~~~~~~~~~~~aIR~~~---p~~~v~~~-~~~~~~- 218 (341)
++.+.++++|+. .+...-||++|||... . . +.+.+.+|+..+.++||++. |+..|.-. .+|...
T Consensus 122 a~a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpasA~p~~e 201 (591)
T 4aw7_A 122 AAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAAAYPAWE 201 (591)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEESCCCTT
T ss_pred HHHHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccccccccc
Confidence 344445555553 4456779999999932 1 1 24578899999999999976 77766543 344321
Q ss_pred --Ch-------hhhhhccCCCCcEEEEeeecCCCCcc-c---cCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecC
Q 019395 219 --DH-------KELLSFASGLSRVVIDVHYYNLFSNN-F---NGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 285 (341)
Q Consensus 219 --~~-------~~~~~~~~~~~~~v~~~H~Y~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~ 285 (341)
++ ..|++. .+..-..+++|.|.....+ . .+...+..++-|..+.. ..-...+|++|+|+|.
T Consensus 202 ~~nF~~W~~~~k~Fmd~-ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~Ys~-----~k~G~vKP~~ISEYG~ 275 (591)
T 4aw7_A 202 DGNFNYWNTRMKMFIDR-AGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEAYSY-----IKFGHVKPLAISEFGG 275 (591)
T ss_dssp TTTTHHHHHTHHHHHHH-HGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHHHHH-----HHHSSCCCEEEEEEEE
T ss_pred ccchhhhhHHHHHHHHh-cCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHHHHH-----HHhCCCcceEEeccCC
Confidence 22 233333 3556679999999753111 1 11223334444333221 1112357899999995
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0033 Score=56.74 Aligned_cols=206 Identities=18% Similarity=0.176 Sum_probs=115.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.|++.|++.||| |. + + ..+++.++..||+|+|.+...... .
T Consensus 16 ~~vv~llk~~~i~~vRl---Y~----~---d----------~~vl~A~~~tgi~v~lgv~n~~~~------------~-- 61 (312)
T 2cyg_A 16 SEVVSLYKSNNIARMRL---YD----P---N----------QAALQALRNSNIQVLLDVPRSDVQ------------S-- 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---SS----C---C----------HHHHHHHTTSCCEEEEEECHHHHH------------H--
T ss_pred HHHHHHHHhcCCCEEEE---cC----C---C----------HHHHHHHHhcCCEEEEeccccchh------------h--
Confidence 34467789999999998 21 1 1 267788889999999987642000 0
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC--ceEEEeC---CCCCCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST--AYVIMSN---RLGPAD 219 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~--~~v~~~~---~~~~~~ 219 (341)
. ...++...+.++.-+..|.....|.++-+-||+.........+..+++.+.+++++.+-. .+|.... .+..+.
T Consensus 62 ~-a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl~~~ikVst~~~~~~~~~s~ 140 (312)
T 2cyg_A 62 L-ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSY 140 (312)
T ss_dssp H-HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCTTTSEEEEEEEGGGBSCCS
T ss_pred h-hhCHHHHHHHHHHHHHhhCCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCchhhcccCC
Confidence 0 011223334445555566555678888899999764456778999999999999987743 4454432 222211
Q ss_pred h--------------hhhhhcc-CCCCcEEEEeeecCCCCcc----------cc--Cc-------cchhhhHHHHhhhhh
Q 019395 220 H--------------KELLSFA-SGLSRVVIDVHYYNLFSNN----------FN--GL-------NVQQNIDYVNNQRAS 265 (341)
Q Consensus 220 ~--------------~~~~~~~-~~~~~~v~~~H~Y~~~~~~----------~~--~~-------~~~~~~~~~~~~~~~ 265 (341)
+ ...+++. ...+.+.+.+|+|..+... +. .. ......+... ..
T Consensus 141 pPS~g~f~~~~~~~~~p~l~fl~~~~sp~~vN~yPyf~~~~~p~~i~l~yalf~~~~~~v~d~~~~y~n~fda~~---Da 217 (312)
T 2cyg_A 141 PPSAGAFSSAAQAYLSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTASGVVVQDGRFSYQNLFDAIV---DA 217 (312)
T ss_dssp SGGGCCBCHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHHSTTTSCHHHHHTCCCSCSEEETTEEECSHHHHHH---HH
T ss_pred CCCcccccchHHHHHHHHHHHHHhcCCcceeccCchhhccCCCCCccchhhhccCCCceeccccccchhhHHHHH---HH
Confidence 1 1122221 2234456666666432100 00 00 0001111111 11
Q ss_pred hhhhhhcc--CCCceEEEeecCCCCC--CCCCHHHHHHHHHHHHHHH
Q 019395 266 DLGAVTTS--NGPLTFVGEWTCEWNV--KDASKQDYQRFANAQLDVY 308 (341)
Q Consensus 266 ~~~~~~~~--~~~pv~vGE~g~~~~~--~~~~~~~~~~~~~~~~~~~ 308 (341)
....+.+. .+++|+|+|-|=++.+ ..++.+..+.|.+..+...
T Consensus 218 v~~al~~~g~~~~~ivVsEtGWPS~G~~~~as~~na~~y~~~li~~~ 264 (312)
T 2cyg_A 218 VFAALERVGGANVAVVVSESGWPSAGGGAEASTSNAQTYNQNLIRHV 264 (312)
T ss_dssp HHHHHHTTTCTTCCEEEEEECCCSSSSSTTSSHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhCCCCCeEEEEeeeCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 11122232 3578999999955433 3456777888888887766
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0032 Score=56.66 Aligned_cols=104 Identities=18% Similarity=0.181 Sum_probs=71.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.|++.|++.||| |. + + ..+++.++..||+|+|++....- ..
T Consensus 16 ~~vv~llk~~~i~~VRl---Y~----~---d----------~~vL~A~~~tgi~v~lgv~n~~~--------------~~ 61 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRL---YA----P---N----------QAALQAVGGTGINVVVGAPNDVL--------------SN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---SS----C---C----------HHHHHHHTTSCCEEEEEECGGGH--------------HH
T ss_pred HHHHHHHHhcCCCEEEE---cC----C---C----------HHHHHHHHhcCCEEEEecccchh--------------hH
Confidence 55667789999999998 21 1 1 36778888999999998764210 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
. ....+...++++.-+..| ....|.++-+-||+.. +. ...+..+++.+.+++++.+=.
T Consensus 62 ~-a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl~-g~-~~~L~~am~~v~~aL~~~gl~ 119 (306)
T 1aq0_A 62 L-AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG-GA-TRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCG-GG-GGGHHHHHHHHHHHHHHTTCT
T ss_pred h-hhCHHHHHHHHHHhhccC-CCccEEEEEecccccC-CC-HHHHHHHHHHHHHHHHHCCCC
Confidence 0 122344445555555566 4456888889999975 33 678899999999999987643
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0039 Score=56.14 Aligned_cols=204 Identities=15% Similarity=0.147 Sum_probs=114.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-.+.|++.|++.||| |. + + ..+++.++..||+|+|++..... ..
T Consensus 16 ~~vv~llk~~~i~~vRl---Y~----~---d----------~~vL~A~~~tgi~v~lgv~n~~~--------------~~ 61 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRI---YF----A---D----------GQALSALRNSGIGLILDIGNDQL--------------AN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---SS----C---C----------HHHHHHTTTSCCEEEEECCGGGH--------------HH
T ss_pred HHHHHHHHhcCCCEEEE---cC----C---C----------HHHHHHHHhcCCEEEEeccccch--------------hh
Confidence 45566789999999998 21 1 1 26778888999999998764210 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-ceEEEeC---CCCCCC-
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSN---RLGPAD- 219 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~v~~~~---~~~~~~- 219 (341)
. ....+...+.++.-+..|.....|.++-+-||+-. + ....+..+++.+.+++++.+-. .+|.... .|..+.
T Consensus 62 ~-a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~-~-~~~~L~~am~~v~~aL~~~gl~~ikVst~~~~~~~~~s~p 138 (306)
T 1ghs_A 62 I-AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG-G-ATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFP 138 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCG-G-GGGGHHHHHHHHHHHHHHHTCTTSEEEEEEEGGGEECCSS
T ss_pred h-hhCHHHHHHHHHHHHhhhCCCceEEEEEEeccccC-C-CHHHHHHHHHHHHHHHHHCCCCceeEEeccchhhcccCCC
Confidence 0 11223344445555556655567888889999986 3 5678999999999999987654 4555432 122111
Q ss_pred ----------hhhhhhcc-CCCCcEEEEeeecCCCCcc------------------cc--CccchhhhHHHHhhhhhhhh
Q 019395 220 ----------HKELLSFA-SGLSRVVIDVHYYNLFSNN------------------FN--GLNVQQNIDYVNNQRASDLG 268 (341)
Q Consensus 220 ----------~~~~~~~~-~~~~~~v~~~H~Y~~~~~~------------------~~--~~~~~~~~~~~~~~~~~~~~ 268 (341)
...+++++ ...+.+.+.+|+|..+... +. ........+.... ....
T Consensus 139 Ps~g~F~~~~~~p~l~fL~~~~~~~~vN~yPyf~~~~~p~~i~l~yalf~~~~~v~d~~t~~~y~n~fda~~D---av~~ 215 (306)
T 1ghs_A 139 PSAGVFKNAYMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVD---AVYA 215 (306)
T ss_dssp GGGCEESSTHHHHHHHHHHHHTCCEEEECCHHHHHHHCTTTSCHHHHHTCTTCCEECTTTCCEECCHHHHHHH---HHHH
T ss_pred CCccchhhhhhhHHHHHHHhcCCeeEeecChhhcccCCCCccccchhhcCCCcceeccccccccchHHHHHHH---HHHH
Confidence 11222221 1234566666666432100 00 0001111111111 1111
Q ss_pred hhhc--cCCCceEEEeecCCCCC-CCCCHHHHHHHHHHHHHHH
Q 019395 269 AVTT--SNGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVY 308 (341)
Q Consensus 269 ~~~~--~~~~pv~vGE~g~~~~~-~~~~~~~~~~~~~~~~~~~ 308 (341)
.+.+ ..+++|+|+|-|=++.+ ..++.+..+.|.+..+...
T Consensus 216 al~~~g~~~~~ivVsEtGWPS~G~~~as~~na~~y~~~li~~~ 258 (306)
T 1ghs_A 216 ALEKAGAPAVKVVVSESGWPSAGGFAASAGNARTYNQGLINHV 258 (306)
T ss_dssp HHHHHTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHTTG
T ss_pred HHHHcCCCCCeEEEeeccCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 2223 23578999999955432 2456777888888877654
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00048 Score=64.63 Aligned_cols=214 Identities=12% Similarity=0.093 Sum_probs=110.8
Q ss_pred HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCC-CCCCCCCCccCCchhHHH
Q 019395 73 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN-EHSATRDGFQEWGDSNVA 151 (341)
Q Consensus 73 ~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~-~~~g~~~~~~~w~~~~~~ 151 (341)
.+|++.+|+||+.-. ..+. ....+++.|.+.||+++......|+..-.. ...|...+ ....+++.+
T Consensus 46 g~g~s~~R~~ig~~~-------~~~~-----~~~~~~k~A~~~~~~i~aspWspP~WMk~~~~~~g~~~~-g~L~~~~y~ 112 (401)
T 3kl0_A 46 QLGFSILRIHVDENR-------NNWY-----KEVETAKSAVKHGAIVFASPWNPPSDMVETFNRNGDTSA-KRLKYNKYA 112 (401)
T ss_dssp CCCCCEEEEEECSSG-------GGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGEEEEEETTEEEE-EEECGGGHH
T ss_pred CCceEEEEEEeCCCc-------ccch-----hHHHHHHHHHhCCCEEEEecCCCCHHhccCCCcCCCccC-CcCChHHHH
Confidence 489999999997421 1222 234577778889999999999998752100 00010000 001246667
Q ss_pred HHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC----CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCC-CCh-hhhh
Q 019395 152 DTVAVIDFLAARYANRP-SLAAIELINEPLAP----GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP-ADH-KELL 224 (341)
Q Consensus 152 ~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~----~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~-~~~-~~~~ 224 (341)
.+++++..+++.|+..- .|.++.+.|||... ..+.++.+.|.+..... -+..|++.+.+.- .++ ..++
T Consensus 113 ~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~t~~~~~~fi~~~lg~-----~~tkI~~~d~~~~~~~~~~~il 187 (401)
T 3kl0_A 113 AYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHEWTWWTPQEILRFMRENAGS-----INARVIAPESFQYLKNLSDPIL 187 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTSCTTSCCCCHHHHHHHHHHTGGG-----CSSEEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeeecccCCCCCCCCCCHHHHHHHHHHhccc-----cCceEEecchhhhhhhhhHHHh
Confidence 77777777777776543 57788899999752 12345555554433221 1355666643221 011 1222
Q ss_pred hccCC-CCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-C-CCHHHHHHHH
Q 019395 225 SFASG-LSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-D-ASKQDYQRFA 301 (341)
Q Consensus 225 ~~~~~-~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-~-~~~~~~~~~~ 301 (341)
..+.. ..-..+.+|.|... ...+. ...+. ++..+++++++|.+...... + ..-..-..+.
T Consensus 188 ~D~~a~~~v~gia~H~Y~~~---~~~l~----~~~~~----------~~~~~K~lw~TE~~~~~~~~~~~~~w~~al~~a 250 (401)
T 3kl0_A 188 NDPQALANMDILGTHLYGTQ---VSQFP----YPLFK----------QKGAGKDLWMTEVYYPNSDTNSADRWPEALDVS 250 (401)
T ss_dssp TCHHHHHTCSEEEEECTTCC---GGGSC----CHHHH----------HHCTTCEEEEEEECCSCCCTTCTTCTTTTHHHH
T ss_pred cCHhHHhhCcEEEEEcCCCC---ccccc----chhHH----------hhCCCCeEEEEecccCCCCCccccchhHHHHHH
Confidence 11100 11146899999531 10100 00000 12346789999987543211 0 1111112344
Q ss_pred HHHHHHHcc-CCCcEEEeccc
Q 019395 302 NAQLDVYGR-ATFGWAYWAHK 321 (341)
Q Consensus 302 ~~~~~~~~~-~~~Gw~~W~~k 321 (341)
+.....+.. ...+|.+|...
T Consensus 251 ~~I~~~l~~~~~~a~v~Wnl~ 271 (401)
T 3kl0_A 251 QHIHNAMVEGDFQAYVWWYIR 271 (401)
T ss_dssp HHHHHHHHTSCCSEEEEEESB
T ss_pred HHHHHHHHhccCcEEEEcccc
Confidence 444444443 34689999873
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.011 Score=56.90 Aligned_cols=110 Identities=14% Similarity=0.153 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHcCCeEEEecCCCC--------------------CCCCCCCC-----C--CCCC-------CccCCc--
Q 019395 103 KVLDNAFDWAEKYGVKVIVDLHAAP--------------------GSQNGNEH-----S--ATRD-------GFQEWG-- 146 (341)
Q Consensus 103 ~~ld~~i~~a~~~gi~vildlh~~~--------------------g~~~~~~~-----~--g~~~-------~~~~w~-- 146 (341)
...+.+++..+++|.+.|++|--.. |.|...+. + |.+. ..+...
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~~~ 172 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTIGWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDANT 172 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSSEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGTEE
T ss_pred hHHHHHHHHHHhcCCceeEEEeccceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccccC
Confidence 6788999999999999999987431 11211110 0 1100 011111
Q ss_pred hhHHHHHHHHHHHHHHHhCCC--CceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 147 DSNVADTVAVIDFLAARYANR--PSLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 147 ~~~~~~~~~~~~~la~~y~~~--~~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+.......+++..|.++|+.. -.|-.|+|-|||.. ...+.+++.+.+.+..++||++||+..|+-.
T Consensus 173 ~~~~~y~~~~v~~l~~~~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~i~l~GP 250 (535)
T 3ii1_A 173 LVDSTFQQGWAQHLVSQWGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPSALIVGP 250 (535)
T ss_dssp ECCHHHHHHHHHHHHHHHCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcHHHHHHHHHHHHHhcCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEeeh
Confidence 234556667888888888653 35778999999942 1256778999999999999999999877743
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0011 Score=64.28 Aligned_cols=106 Identities=24% Similarity=0.265 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHcCCeEEEecCCC-----CCCCCCCCCCCCCCCccCCc----------------hhHHHHHHHHHHHHHH
Q 019395 104 VLDNAFDWAEKYGVKVIVDLHAA-----PGSQNGNEHSATRDGFQEWG----------------DSNVADTVAVIDFLAA 162 (341)
Q Consensus 104 ~ld~~i~~a~~~gi~vildlh~~-----~g~~~~~~~~g~~~~~~~w~----------------~~~~~~~~~~~~~la~ 162 (341)
.+++++++|++.|..+|+.+.-. .+..+-.+.... ....|. +.......++++.+.+
T Consensus 91 ~~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~--~~~~w~e~~n~~~~~~~~~p~~~~g~~~~~~~~~~lr~ 168 (524)
T 2yih_A 91 VVTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAA--PSARWNQVVNAKNAPFQLQPDLNDNYVYVDEFVHFLVN 168 (524)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCS--SSTTEEEEESCCCSCCCSSCCSSSSEEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcC--cccchhhhhccccCcccccCCCCCcchhHHHHHHHHHH
Confidence 38999999999999999998742 011000000000 000011 0011123467888888
Q ss_pred HhCCC--C-ceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 163 RYANR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 163 ~y~~~--~-~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
+|+.. | .|-.|+|.|||.. ...+.+++.+.+.+.+++||++||+..|+.
T Consensus 169 ~~G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 169 KYGTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp HHCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HcCCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 88653 3 4777999999974 124678999999999999999999976664
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0036 Score=62.20 Aligned_cols=208 Identities=14% Similarity=0.029 Sum_probs=109.1
Q ss_pred HHCCCCEEEcCcccccc----cCCCCCCCcc--cch-HHHHHHHHHHHHHcC--CeEEEecCCCCCCCCCCCCCCCCCCc
Q 019395 72 SSNGINAVRIPVGWWIA----NDPTPPKPFV--GGS-SKVLDNAFDWAEKYG--VKVIVDLHAAPGSQNGNEHSATRDGF 142 (341)
Q Consensus 72 ~~~G~N~VRlpi~~~~~----~~~~~~~~~~--~~~-l~~ld~~i~~a~~~g--i~vildlh~~~g~~~~~~~~g~~~~~ 142 (341)
+.+|++.+|++|+=-.+ .++... .+. ... ....-.+++.|+++| |+++......|+..... +.
T Consensus 63 ~Gigls~~R~~IG~~dfs~~~~~~~~f-~~~~d~~~~~~~~i~~lk~A~~~~p~lki~aspWSpP~WMK~n---~~---- 134 (656)
T 3zr5_A 63 FGASLHILKVEIGGDGQTTDGTEPSHM-HYELDENYFRGYEWWLMKEAKKRNPDIILMGLPWSFPGWLGKG---FS---- 134 (656)
T ss_dssp TSSCCSEEEEEECCSSBCSSSBCCCSC-SSTTCCCSCCSSHHHHHHHHHHHCTTCEEEEEESCBCGGGGTT---SS----
T ss_pred CCCeeEEEEEEecCCCccCCCCCCcCC-ccccccchhhchhHHHHHHHHHhCCCcEEEEecCCCcHHhccC---CC----
Confidence 35899999999963111 111111 111 111 112234555555554 78888888888753211 10
Q ss_pred cCCchhHHHHHHHHHHHHHHHh-CC-CCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-ceEEEeCCCCCCC
Q 019395 143 QEWGDSNVADTVAVIDFLAARY-AN-RPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST-AYVIMSNRLGPAD 219 (341)
Q Consensus 143 ~~w~~~~~~~~~~~~~~la~~y-~~-~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~v~~~~~~~~~~ 219 (341)
+.+++.+.+++++...++.| +. --.|.++.+.|||... ..|.+.+..++++.+.+ ..|++.+......
T Consensus 135 --l~~~~y~~yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~-------~~fik~L~p~L~~~gl~~~kI~~~D~n~~~~ 205 (656)
T 3zr5_A 135 --WPYVNLQLTAYYVVRWILGAKHYHDLDIDYIGIWNERPFD-------ANYIKELRKMLDYQGLQRVRIIASDNLWEPI 205 (656)
T ss_dssp --CTTSSHHHHHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC-------HHHHHHHHHHHHHTTCTTCEEEEEEECSTTH
T ss_pred --CChHHHHHHHHHHHHHHHHHHHhcCCceEEEeeccCCCcc-------ccHHHHHHHHHHHcCCCccEEEEcCCCchHH
Confidence 22345556666665555553 32 2357778899999852 24566777888888876 6677765322111
Q ss_pred hhhhhhcc-CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHH
Q 019395 220 HKELLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 298 (341)
Q Consensus 220 ~~~~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~ 298 (341)
...++..+ ....-.++.+| |.. + . . .. . .+..+++++.+|.+..++. .....
T Consensus 206 ~~~il~d~~a~~~v~gia~H-Y~g-~-~----~-~~-----~----------~~~p~k~lw~TE~~~~~~~----~~g~g 258 (656)
T 3zr5_A 206 SSSLLLDQELWKVVDVIGAH-YPG-T-Y----T-VW-----N----------AKMSGKKLWSSEDFSTINS----NVGAG 258 (656)
T ss_dssp HHHHHHCHHHHHHCCEEEEE-SCT-T-C----C-CH-----H----------HHHHTCEEEEEEEECSCTT----HHHHH
T ss_pred HHHHhcCHhHHhhccEEEEE-CCC-C-C----c-ch-----H----------hhCCCCceEEEccccCCCC----CCCcc
Confidence 11222110 01123479999 743 1 0 0 00 0 1123667999998864431 12222
Q ss_pred HHHHHHHHHH-ccCCCcEEEeccccC
Q 019395 299 RFANAQLDVY-GRATFGWAYWAHKCE 323 (341)
Q Consensus 299 ~~~~~~~~~~-~~~~~Gw~~W~~k~~ 323 (341)
.|.+.....| .....+|.+|..-..
T Consensus 259 ~wa~~i~~~~~~~~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 259 CWSRILNQNYINGNMTSTIAWNLVAS 284 (656)
T ss_dssp HHHHHHHHHHHHHCCCEEEEECSEEC
T ss_pred HHHHHHHHHHHhCCceEEEEEeeeeC
Confidence 3433333322 235679999987644
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.065 Score=48.22 Aligned_cols=205 Identities=14% Similarity=0.107 Sum_probs=118.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
.+-++.||+.|++.||| | ++ + ..+++.++..||+|+|.+....- ..
T Consensus 17 ~~vv~llks~gi~~VRl---Y----da------D-------~~vL~Al~~sgi~v~vGV~n~~l--------------~~ 62 (316)
T 3em5_A 17 SEVIALYKKSNITRMRI---Y----DP------N-------QAVLEALRGSNIELILGVPNSDL--------------QS 62 (316)
T ss_dssp HHHHHHHHHTTCCEEEC---S----SC------C-------HHHHHHHTTCCCEEEEEECGGGH--------------HH
T ss_pred HHHHHHHHHcCCCEEEE---e----cC------C-------HHHHHHhhcCCceEEEecccchh--------------hh
Confidence 56677889999999998 2 11 1 15889999999999999864200 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC-C---hHHHHHHHHHHHHHHHhcCCC--ceEEEeCCC---
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV-A---LDTLKSYYKAGYDAVRKYTST--AYVIMSNRL--- 215 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~-~---~~~~~~~~~~~~~aIR~~~p~--~~v~~~~~~--- 215 (341)
. .......++++.=...|.....|..+-+-||+...+. + ...+...++.+.+++++.+=. ..|.....+
T Consensus 63 l--a~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl 140 (316)
T 3em5_A 63 L--TNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLV 140 (316)
T ss_dssp H--TSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSE
T ss_pred c--cCHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCCCceEEEeccccccc
Confidence 0 0123444455555556655567877889999876432 2 678889999999999998743 444443222
Q ss_pred CCCC--------------hhhhhhcc-CCCCcEEEEeeecCCCCcc--ccCc-----------------cchhhhHHHHh
Q 019395 216 GPAD--------------HKELLSFA-SGLSRVVIDVHYYNLFSNN--FNGL-----------------NVQQNIDYVNN 261 (341)
Q Consensus 216 ~~~~--------------~~~~~~~~-~~~~~~v~~~H~Y~~~~~~--~~~~-----------------~~~~~~~~~~~ 261 (341)
..+. ...+++++ .....+++..++|..+... .... ......+.+..
T Consensus 141 ~~s~pPS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~YPyf~~~~~~~~i~l~yAlf~~~~~~~~~~~~~Y~nlfDa~~D 220 (316)
T 3em5_A 141 GNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQRGYKNLFDATLD 220 (316)
T ss_dssp EECSSGGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHHCTTTSCHHHHTTCCSSCSEEETTEEECSHHHHHHH
T ss_pred ccCCCCCCceechhHHHHHHHHHHHHHhcCCeeEeecchhhhccCCCCCcCchhhcccCCCcccCCCCccHHHHHHHHHH
Confidence 1111 11222322 2456788888888544211 0000 01111121111
Q ss_pred hhhhhhhhhhcc--CCCceEEEeecCCCCC-CCCCHHHHHHHHHHHHHHH
Q 019395 262 QRASDLGAVTTS--NGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVY 308 (341)
Q Consensus 262 ~~~~~~~~~~~~--~~~pv~vGE~g~~~~~-~~~~~~~~~~~~~~~~~~~ 308 (341)
.. ...+.+. .+++|+|||-|=++.+ ..++.+..++|.+..+...
T Consensus 221 a~---~~Al~~~g~~~~~v~V~EtGWPs~G~~~as~~na~~y~~~li~~~ 267 (316)
T 3em5_A 221 AL---YSALERASGGSLEVVVSESGWPSAGAFAATFDNGRTYLSNLIQHV 267 (316)
T ss_dssp HH---HHHHHHTTCTTCCEEEEEECCCSSSSTTCCHHHHHHHHHHHHHHT
T ss_pred HH---HHHHHHcCCCCCceEeccccCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 11 1122232 3578999999844432 2356777888888877654
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.019 Score=54.22 Aligned_cols=149 Identities=15% Similarity=0.230 Sum_probs=83.2
Q ss_pred HHHHHHHHCCCCEEEcCcccccccCCCCCC---Cccc--chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCC
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIANDPTPPK---PFVG--GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~---~~~~--~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~ 140 (341)
+-++.|+++|+|+|=|.=-+..-....... ..++ +.++.++++|+.|+++||+||+|+--. |++.
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N--------H~s~-- 109 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN--------YRGE-- 109 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT--------TTSS--
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCC--------cCCC--
Confidence 457899999999999842121101110000 0111 468999999999999999999998532 1110
Q ss_pred CccCCc----hhHHHHHHHHHHHHHHHhCCCCceeEEEeec-CCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 141 GFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIELIN-EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 141 ~~~~w~----~~~~~~~~~~~~~la~~y~~~~~v~~~el~N-EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
..|. +...+...+.++...+ + +-..+- +|.++ -|. . ..+.+++.+++++..|+..++++..+
T Consensus 110 --~~wF~~q~~~Vr~~~~~~~~~Wl~-~-gvDGfR-lD~v~~~~~-----~---~~~~~~~~~~~~~~~~~~~~i~~e~~ 176 (424)
T 2dh2_A 110 --NSWFSTQVDTVATKVKDALEFWLQ-A-GVDGFQ-VRDIENLKD-----A---SSFLAEWQNITKGFSEDRLLIAGTNS 176 (424)
T ss_dssp --STTCSSCHHHHHHHHHHHHHHHHH-H-TCCEEE-ECCGGGSTT-----H---HHHHHHHHHHHHHHCTTCEEEEECSC
T ss_pred --cccccccCHHHHHHHHHHHHHHHH-c-CCCEEE-EeccccCCc-----c---HHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 1143 4555666677776665 3 433433 44444 232 1 12444455567777787777777644
Q ss_pred CCCChhhhhhccCCCCcEEEEeee
Q 019395 216 GPADHKELLSFASGLSRVVIDVHY 239 (341)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~H~ 239 (341)
. +............+.++++|+
T Consensus 177 ~--~~~~~~~~~~~~~~~~~~f~~ 198 (424)
T 2dh2_A 177 S--DLQQILSLLESNKDLLLTSSY 198 (424)
T ss_dssp C--CHHHHHHHTTTCTTCEEECST
T ss_pred C--CHHHHHHHhccccccccchhh
Confidence 3 333333332222335666654
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.016 Score=57.16 Aligned_cols=136 Identities=16% Similarity=0.196 Sum_probs=79.5
Q ss_pred HHHHHHHHCCCCEEEc-Cccccc---ccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCC------
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWI---ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ------ 130 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~---~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~------ 130 (341)
+-++.|+++|+|+|=| ||.-.. .-++......++ +..+.++++|+.|+++||+||||+ |......
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 255 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVL 255 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHHH
Confidence 4589999999999998 331100 001111001111 358999999999999999999997 4332110
Q ss_pred -CC--------CCCCC-------CCCC-----------ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 019395 131 -NG--------NEHSA-------TRDG-----------FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 182 (341)
Q Consensus 131 -~~--------~~~~g-------~~~~-----------~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~ 182 (341)
++ +...+ .... ...+. +..++..++.++..++.| +-..+- +|++|+-.
T Consensus 256 ~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~-gvDGfR-~D~~~~~~-- 331 (583)
T 1ea9_C 256 KNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRET-GIDGWR-LDVANEVS-- 331 (583)
T ss_dssp TTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHH-CCSEEE-ETTCTTSC--
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhc-CceEEE-ecccccCC--
Confidence 00 00000 0000 11122 567777788888888776 333443 66666542
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 183 GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
..+.+++.+++++..|+..++-+
T Consensus 332 -------~~f~~~~~~~v~~~~p~~~~igE 354 (583)
T 1ea9_C 332 -------HQFWREFRRVVKQANPDAYILGE 354 (583)
T ss_dssp -------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -------HHHHHHHHHHHHhhCCCeEEEEE
Confidence 34667777888888998755543
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.04 Score=51.30 Aligned_cols=181 Identities=12% Similarity=0.044 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCCCCCCccCCc---h--hHHHHHHHHHHHHHHH---hCCC----
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWG---D--SNVADTVAVIDFLAAR---YANR---- 167 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g~~~~~~~w~---~--~~~~~~~~~~~~la~~---y~~~---- 167 (341)
.++.+.+.+..+.++|--|.|..|-. |........+. ..+. + ..-+.+...++.+|+. +++.
T Consensus 110 ~~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~~~~~~~-----~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~~~G 184 (396)
T 2vx5_A 110 NFEKMQHWIKAGYSRGGVITISWHVFNPVSGGNSWDKT-----PAVHELIPGGARHATLKAYLDTFVAFNEGLADVDAQG 184 (396)
T ss_dssp BHHHHHHHHHHHHHTTCEEEEECCCCCTTTSCCTTCCC-----CCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEECTTS
T ss_pred ChHHHHHHHHHHHHCCCeEEEEEeeCCCCCCCCCcCch-----HHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhccC
Confidence 46667777777888999999999965 32111111110 0011 1 1223445555555554 4322
Q ss_pred ----CceeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHh-cCCCceEEEeCCCCCC-----ChhhhhhccCCC
Q 019395 168 ----PSLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRK-YTSTAYVIMSNRLGPA-----DHKELLSFASGL 230 (341)
Q Consensus 168 ----~~v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~-~~p~~~v~~~~~~~~~-----~~~~~~~~~~~~ 230 (341)
|.|+ |-+..|.++. ..+++.++++++.+++++|+ .+-+.++.+=++.... ....+....+++
T Consensus 185 ~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~YPGD 263 (396)
T 2vx5_A 185 NKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGYPGD 263 (396)
T ss_dssp CEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTCCCG
T ss_pred CccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcCCCC
Confidence 1334 8899999862 12478999999999999994 4555666654322111 112333333333
Q ss_pred C-cEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC
Q 019395 231 S-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 231 ~-~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~ 288 (341)
+ =.++.+-.|..........+.....+.+. .....+..+++..++|+.|+|+|....
T Consensus 264 dyVDivG~D~Y~~~~~~~~~~~~~~f~~~~~-~~~~~l~~~a~~~~Kpial~E~G~~~~ 321 (396)
T 2vx5_A 264 AYVDIIGLDNYWDVGHEANTASADEQKAALT-ASLKQLVQIARSKGKIAALTETGNNRL 321 (396)
T ss_dssp GGCSEEEEECCGGGTCTTCCSCHHHHHHHHH-HHHHHHHHHHHHHTCEEEEEEECCTTC
T ss_pred ceEEEEEEeccCCCCCCccccchhhHHHHHH-HHHHHHHHHhhcCCCeEEEEeecCCCC
Confidence 3 35777777854221111111111111111 122234445555578899999998653
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.029 Score=55.26 Aligned_cols=136 Identities=12% Similarity=0.161 Sum_probs=78.1
Q ss_pred HHHHHHHHCCCCEEEcC-cccccc---cCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCC-------
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIA---NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS------- 129 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~---~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~------- 129 (341)
+-++.|+++|+|+|=|. |.-... -++......+ -+..+.++++|+.|+++||+||||+ |.....
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 259 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVW 259 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHHH
Confidence 45899999999999983 311000 0000000001 1358999999999999999999998 433211
Q ss_pred ----CCC------CCCC-------CCC------CC--ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC
Q 019395 130 ----QNG------NEHS-------ATR------DG--FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG 183 (341)
Q Consensus 130 ----~~~------~~~~-------g~~------~~--~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~ 183 (341)
.+. +... +.- .. ...+. +..++..++.++..++.| +-..+- +|++++-.
T Consensus 260 ~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~-giDGfR-~D~a~~~~--- 334 (588)
T 1j0h_A 260 KNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREF-DIDGWR-LDVANEID--- 334 (588)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHH-CCCEEE-ETTGGGSC---
T ss_pred hcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhc-CCcEEE-EeccccCC---
Confidence 000 0000 000 00 11122 566777778888888776 323443 56666532
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 184 VALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
..+.+++.+++++..|+..++-+
T Consensus 335 ------~~f~~~~~~~v~~~~p~~~~igE 357 (588)
T 1j0h_A 335 ------HEFWREFRQEVKALKPDVYILGE 357 (588)
T ss_dssp ------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ------HHHHHHHHHHHHHhCCCeEEEEE
Confidence 35666777788888998755543
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0022 Score=60.19 Aligned_cols=60 Identities=22% Similarity=0.512 Sum_probs=52.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeE--EEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~v--ildlh~~~g 128 (341)
++.++.||++|+..|.+.| ||-..++..+..|+ |+.++++++.+++.||++ |+.+|...|
T Consensus 36 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Yd---WsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 8899999999999999999 67777776556775 899999999999999986 889997644
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0022 Score=60.17 Aligned_cols=60 Identities=25% Similarity=0.589 Sum_probs=51.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeE--EEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~v--ildlh~~~g 128 (341)
++.++.||++|+..|.+.| ||-..++..+..|+ |+.++++++.+++.||++ |+.+|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Yd---WsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 8899999999999999999 67777766556775 899999999999999986 889997644
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0027 Score=59.98 Aligned_cols=60 Identities=25% Similarity=0.555 Sum_probs=51.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeE--EEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV--IVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~v--ildlh~~~g 128 (341)
++.++.||++|+..|.+.| ||-..++..+..|+ |+.++++++.+++.||++ |+.+|...|
T Consensus 34 ~a~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Yd---WsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 8899999999999999999 67777765556775 899999999999999986 889997644
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.1 Score=46.36 Aligned_cols=164 Identities=13% Similarity=0.039 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC-CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 103 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH-SATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 103 ~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~-~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
..+.+.++.+.++|-.++|.+|-..+. .... .| +..+...++.+.|. .+ +.| |+ |-+..|.++
T Consensus 49 ~~~~~~~~~~~~~G~i~~isw~P~~~~--~~~i~~G----------~~d~~i~~~A~~l~-~~-g~p-V~-~R~~hE~nG 112 (283)
T 2v3g_A 49 SWVRPYADAVYNNGSILMITWEPWEYN--TVDIKNG----------KADAYITRMAQDMK-AY-GKE-IW-LRPLHEANG 112 (283)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCC--HHHHHTT----------TTHHHHHHHHHHHH-HH-CSC-EE-EEESCCTTS
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCC--HHHhcCC----------chHHHHHHHHHHHH-hc-CCc-EE-EEeccccCC
Confidence 445677778899999999999932110 0000 01 11111222222222 23 455 44 779999986
Q ss_pred C-----C------CChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCC--CChhhhhhccCCCC-cEEEEeeecCCCCccc
Q 019395 182 P-----G------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP--ADHKELLSFASGLS-RVVIDVHYYNLFSNNF 247 (341)
Q Consensus 182 ~-----~------~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~--~~~~~~~~~~~~~~-~~v~~~H~Y~~~~~~~ 247 (341)
. . .+++.+++.++.+++++|+.+-+.++++=+.... .....+....++++ =.++.+-.|.......
T Consensus 113 ~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~vw~p~~~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~~~ 192 (283)
T 2v3g_A 113 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQS 192 (283)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCT
T ss_pred CcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCCCCccchhhhCCCCCEEEEEEEEccCCCCccc
Confidence 2 1 2688999999999999999865555655221110 01122333322322 2355666664321100
Q ss_pred cCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCC
Q 019395 248 NGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 287 (341)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~ 287 (341)
...... ....+... .+.. .+..++|+.|+|+|...
T Consensus 193 ~~~~~~-~f~~~~~~---~~~~-~~~~~Kpi~i~E~G~~~ 227 (283)
T 2v3g_A 193 WGSQWQ-SFDQVFSR---AYQA-LASINKPIIIAEFASAE 227 (283)
T ss_dssp TTCCCC-CHHHHHHH---HHHH-HTTSSSCEEEEEEEECS
T ss_pred ccchhH-hHHHHHHH---HHHH-HHhCCCcEEEEeecCCC
Confidence 000001 11111111 1111 23457889999999765
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=96.53 E-value=0.035 Score=54.64 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=76.8
Q ss_pred HHHHHHHHCCCCEEEcC-cccccc---cCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC------
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIA---NDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ------ 130 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~---~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~------ 130 (341)
+-++.|+++|+|+|=|. |.-... -++......+ -+..+.++++|+.|+++||+||||+ |......
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 256 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVL 256 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHHH
Confidence 45899999999999983 311000 0000000001 1357999999999999999999997 3322110
Q ss_pred --------------CCCCC--------C--C-CCCC--ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 019395 131 --------------NGNEH--------S--A-TRDG--FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 182 (341)
Q Consensus 131 --------------~~~~~--------~--g-~~~~--~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~ 182 (341)
.++.. . + ...+ ...+. +..++..++.++..+ .| +-..+- +|++++-.
T Consensus 257 ~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~-gvDGfR-~D~a~~~~-- 331 (585)
T 1wzl_A 257 QKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQ-GIDGWR-LDVANEVD-- 331 (585)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HT-TCCEEE-ETTGGGSC--
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-hC-CCeEEE-EeccccCC--
Confidence 00000 0 0 0000 11122 566677777777777 55 333443 66676642
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 183 GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
..+.+++.+++++..|+..++-+
T Consensus 332 -------~~f~~~~~~~v~~~~p~~~~igE 354 (585)
T 1wzl_A 332 -------HAFWREFRRLVKSLNPDALIVGE 354 (585)
T ss_dssp -------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -------HHHHHHHHHHHHHHCCCEEEEEE
Confidence 34667777888888998755543
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0058 Score=58.07 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhCCCC---ceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 153 TVAVIDFLAARYANRP---SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 153 ~~~~~~~la~~y~~~~---~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
..++++.|.++|+... .|..|+|.|||.. ...+.+++.+++.+..++||+++|+..|+-
T Consensus 152 ~~e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~G 223 (517)
T 3ik2_A 152 MDEFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETFG 223 (517)
T ss_dssp HHHHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEEc
Confidence 3568888999998652 6888999999952 236788999999999999999999966643
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.076 Score=53.42 Aligned_cols=146 Identities=17% Similarity=0.193 Sum_probs=81.3
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCCCCCCC--c---c--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCC--CC
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDPTPPKP--F---V--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS--QN 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~~~--~---~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~--~~ 131 (341)
++-++.|+++|+|+|-| |+........-...+ | + -+..+.++++|+.|+++||+||+|+ |..+.. ..
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~~ 346 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAWALG 346 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTTT
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCccchhh
Confidence 44458999999999997 442111000000011 0 1 1357999999999999999999997 322211 00
Q ss_pred CCC------CCC-CCCCccCCc--------hhHHHHHHHHHHHHHHHhCCCCceeEEEee---------cC-----CCCC
Q 019395 132 GNE------HSA-TRDGFQEWG--------DSNVADTVAVIDFLAARYANRPSLAAIELI---------NE-----PLAP 182 (341)
Q Consensus 132 ~~~------~~g-~~~~~~~w~--------~~~~~~~~~~~~~la~~y~~~~~v~~~el~---------NE-----P~~~ 182 (341)
.++ +.. .....+.|. +..++..++.++..+++|+= ..+- +|.+ -+ |+..
T Consensus 347 ~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gv-DGfR-~Dav~~mly~d~~r~~g~w~~n~~ 424 (722)
T 3k1d_A 347 RFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHI-DGLR-VDAVASMLYLDYSRPEGGWTPNVH 424 (722)
T ss_dssp TTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCC-CEEE-ECCTHHHHBCCCCCCSSCCSCCCS
T ss_pred cCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCC-CEEE-EcchhhhhhccccccccccccccC
Confidence 111 000 000112232 56677778888888887632 1111 2221 00 1110
Q ss_pred -CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 183 -GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 183 -~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
+.....-..+.+++.++|++..|+.+++-+
T Consensus 425 gg~~n~~~~~fl~~l~~~v~~~~P~~~~iaE 455 (722)
T 3k1d_A 425 GGRENLEAVQFLQEMNATAHKVAPGIVTIAE 455 (722)
T ss_dssp SCSBCHHHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred CCccChHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 111124568889999999999998877665
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.042 Score=52.49 Aligned_cols=137 Identities=17% Similarity=0.202 Sum_probs=78.4
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCC---
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--- 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--- 130 (341)
.+-++.|+++|+|+|=|. +. . ........+ .++ +..+.++++|+.|+++||+||+|+ |......
T Consensus 53 ~~~LdyL~~LGv~~I~l~Pi~-~-~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~ 130 (475)
T 2z1k_A 53 AEKLPYLLDLGVEAIYLNPVF-A-STANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQ 130 (475)
T ss_dssp HHTHHHHHHHTCCEEEECCCE-E-ESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHH
T ss_pred HHHhHHHHHcCCCEEEECCCc-C-CCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHHHH
Confidence 345899999999999984 31 1 100000011 011 358999999999999999999998 5432210
Q ss_pred --------CCC----CCCC----------CC------CC--ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 019395 131 --------NGN----EHSA----------TR------DG--FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEP 179 (341)
Q Consensus 131 --------~~~----~~~g----------~~------~~--~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP 179 (341)
+.. ...+ .. .+ ...+. +..++..++.++..+ .| +-..+- +|..++.
T Consensus 131 ~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~-gvDGfR-~D~~~~~ 207 (475)
T 2z1k_A 131 HLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RF-GVDGWR-LDVPNEI 207 (475)
T ss_dssp HHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HH-TCCEEE-ESSGGGC
T ss_pred HHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHH-HC-CCCEEe-ecccccC
Confidence 000 0000 00 00 11122 566777777777777 44 333443 5666664
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 180 LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
.. + .+.+++.+++++..|+..++ +..|
T Consensus 208 ~~-----~---~~~~~~~~~~~~~~p~~~~i-gE~~ 234 (475)
T 2z1k_A 208 PD-----P---TFWREFRQRVKGANPEAYIV-GEIW 234 (475)
T ss_dssp CC-----H---HHHHHHHHHHHHHCTTCEEE-ECCS
T ss_pred CH-----H---HHHHHHHHHHhhcCCCcEEE-EEec
Confidence 31 2 35666677788888876554 4433
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.054 Score=51.95 Aligned_cols=145 Identities=12% Similarity=0.183 Sum_probs=82.4
Q ss_pred HHHHHH--------HHCCCCEEEcC-cccccc---cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCC
Q 019395 66 EDFKFL--------SSNGINAVRIP-VGWWIA---NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPG 128 (341)
Q Consensus 66 ~d~~~i--------~~~G~N~VRlp-i~~~~~---~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g 128 (341)
+-++.| +++|+++|=|. |.-... -++......++ +..+.|+++|+.|+++||+||+|+ |..+.
T Consensus 31 ~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~ 110 (488)
T 1wza_A 31 EKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSER 110 (488)
T ss_dssp HTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCTT
T ss_pred HhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccCc
Confidence 458899 99999999983 311000 00000000111 368999999999999999999998 43321
Q ss_pred C----------CCC------CCC-----C-----CCC---------------C--CccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 129 S----------QNG------NEH-----S-----ATR---------------D--GFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 129 ~----------~~~------~~~-----~-----g~~---------------~--~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
. .+. +.. . +.. . ....|. +..++..++.++.+.++
T Consensus 111 ~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~~~pdln~~np~Vr~~i~~~~~~Wl~~- 189 (488)
T 1wza_A 111 HPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIGIAKYWLKQ- 189 (488)
T ss_dssp SHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHHHHHHHHHHHT-
T ss_pred cHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCCCCcccccCCHHHHHHHHHHHHHHHHc-
Confidence 1 000 000 0 000 0 011122 55666777777777764
Q ss_pred CCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 165 ANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
+-..+- +|.++..... ........+.+++.+++++..| .++++..|.
T Consensus 190 -gvDGfR-~Da~~~i~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~vgE~~~ 236 (488)
T 1wza_A 190 -GVDGFR-LDGAMHIFPP-AQYDKNFTWWEKFRQEIEEVKP--VYLVGEVWD 236 (488)
T ss_dssp -TCCEEE-EECCCTTSCG-GGTTHHHHHHHHHHHHHTTTSC--CEEEEECCS
T ss_pred -CCCChh-HhhHhhhccc-cCcchHHHHHHHHHHHHhhcCC--CEEEEEeCC
Confidence 444544 6666654310 1113456788888889999988 566665554
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.047 Score=55.12 Aligned_cols=138 Identities=12% Similarity=0.178 Sum_probs=78.8
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccC---C---C--CC---------CCccc------chHHHHHHHHHHHHHcCCeEEE
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAND---P---T--PP---------KPFVG------GSSKVLDNAFDWAEKYGVKVIV 121 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~---~---~--~~---------~~~~~------~~l~~ld~~i~~a~~~gi~vil 121 (341)
+-++.|+++|+|+|=| ||.-....+ + . .. ..|.. +..+.++++|+.|+++||+|||
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 3699999999999998 442100000 0 0 00 01111 1379999999999999999999
Q ss_pred ec---CCCCCCC-------CCC----CCCCCCC------CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 019395 122 DL---HAAPGSQ-------NGN----EHSATRD------GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180 (341)
Q Consensus 122 dl---h~~~g~~-------~~~----~~~g~~~------~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~ 180 (341)
|+ |..+... ..+ ...|... ....+. +...+..++.++..+++| +-..+- +|+++.-
T Consensus 335 DvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~-gVDGfR-~D~~~~~- 411 (718)
T 2e8y_A 335 DVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEY-NVDGFR-FDLLGIL- 411 (718)
T ss_dssp EECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHH-CCCEEE-ETTGGGS-
T ss_pred EEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHh-CCCEEE-EeccccC-
Confidence 97 4333210 000 0011100 111222 667777888888888877 323333 5566443
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
+. .+.+++.+++++.+|+..+ ++..|
T Consensus 412 ----~~----~~~~~~~~~~~~~~p~~~l-igE~w 437 (718)
T 2e8y_A 412 ----DI----DTVLYMKEKATKAKPGILL-FGEGW 437 (718)
T ss_dssp ----BH----HHHHHHHHHHHHHSTTCEE-EECCC
T ss_pred ----CH----HHHHHHHHHHHHhCCCeEE-EEeec
Confidence 12 3455666777888887654 45444
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.096 Score=51.87 Aligned_cols=146 Identities=18% Similarity=0.219 Sum_probs=79.5
Q ss_pred HHHHHHHHHCCCCEEEc-Ccccccc-----cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCC--C
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIA-----NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--N 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~-----~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--~ 131 (341)
++-++.|+++|+|+|=| ||.-... -++......++ +..+.|+++|+.|+++||+||||+ |..+... .
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~ 238 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA 238 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSST
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCccchhh
Confidence 34459999999999998 4421100 00000000011 358999999999999999999997 4322110 0
Q ss_pred CCC------CCCCCC-CccCC-------c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC--------------CCC-
Q 019395 132 GNE------HSATRD-GFQEW-------G-DSNVADTVAVIDFLAARYANRPSLAAIELINE--------------PLA- 181 (341)
Q Consensus 132 ~~~------~~g~~~-~~~~w-------~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE--------------P~~- 181 (341)
.++ +..... ..+.| . +..++..++.++..+++|+= ..+- +|.+.. |+.
T Consensus 239 ~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gv-DGfR-~D~~~~~~~~d~~~~~g~~~~~~~ 316 (617)
T 1m7x_A 239 EFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGI-DALR-VDAVASMIYRDYSRKEGEWIPNEF 316 (617)
T ss_dssp TGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCC-CEEE-ECCSHHHHCC--------------
T ss_pred hcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCc-CEEE-Ecchhhhhhccccccccccccccc
Confidence 000 000000 01122 2 56777788888888888732 1221 232211 000
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 182 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 182 ~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
.......-..+.+++.++|++..|+.+++-+
T Consensus 317 ~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE 347 (617)
T 1m7x_A 317 GGRENLEAIEFLRNTNRILGEQVSGAVTMAE 347 (617)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred cccCCchHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 0011123467888999999999998766654
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.08 Score=53.65 Aligned_cols=145 Identities=15% Similarity=0.219 Sum_probs=79.2
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccc-----ccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC---
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWI-----ANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--- 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~-----~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--- 130 (341)
++-++.|+++|+|+|=|. |.-.. .-++......+ -+..+.|+++|+.|+++||+||||+ |......
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~ 284 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGL 284 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSG
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccch
Confidence 345899999999999983 31100 00010000001 1358999999999999999999998 4332211
Q ss_pred CCCC----------CCCCCCCccCC-------c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeec----CC---------
Q 019395 131 NGNE----------HSATRDGFQEW-------G-DSNVADTVAVIDFLAARYANRPSLAAIELIN----EP--------- 179 (341)
Q Consensus 131 ~~~~----------~~g~~~~~~~w-------~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~N----EP--------- 179 (341)
++++ +.+.......| . +...+..++.++..+++|+= ..+- +|.+. ++
T Consensus 285 ~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gv-DGfR-~Dav~~m~~~~~g~~~~f~~ 362 (755)
T 3aml_A 285 NGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMF-DGFR-FDGVTSMLYHHHGINKGFTG 362 (755)
T ss_dssp GGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCC-CEEE-ETTHHHHHBTTTTTTCCCCS
T ss_pred hccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCC-CEEE-ecchhhhhhcccCccccccc
Confidence 1111 00000001112 2 56677777888888886632 1221 33322 10
Q ss_pred -----CCCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 180 -----LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 180 -----~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
....... .-..|.+.+.+++++..|+.+++-+
T Consensus 363 ~~~~~~~~~~~~-~ai~fl~~~~~~v~~~~p~~~lIaE 399 (755)
T 3aml_A 363 NYKEYFSLDTDV-DAIVYMMLANHLMHKLLPEATIVAE 399 (755)
T ss_dssp CGGGTSSTTBCH-HHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ccccccccccch-hHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 0001111 2336777778889999998866654
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.098 Score=54.26 Aligned_cols=137 Identities=11% Similarity=0.078 Sum_probs=78.5
Q ss_pred HHHHHHHCCCCEEEc-CcccccccCC------C-C--------------CCCcccchHHHHHHHHHHHHHcCCeEEEec-
Q 019395 67 DFKFLSSNGINAVRI-PVGWWIANDP------T-P--------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDL- 123 (341)
Q Consensus 67 d~~~i~~~G~N~VRl-pi~~~~~~~~------~-~--------------~~~~~~~~l~~ld~~i~~a~~~gi~vildl- 123 (341)
-++.|+++|+|+|=| ||.-....+. . . ..|+-....+.|+++|+.|+++||+||||+
T Consensus 474 ~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDvV 553 (921)
T 2wan_A 474 GIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDVV 553 (921)
T ss_dssp HHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEEc
Confidence 489999999999998 4421110100 0 0 011000127999999999999999999998
Q ss_pred --CCCCCCC-------CCC----CCCCCC------CCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC
Q 019395 124 --HAAPGSQ-------NGN----EHSATR------DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG 183 (341)
Q Consensus 124 --h~~~g~~-------~~~----~~~g~~------~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~ 183 (341)
|..+... ... ...|.. .....+. +...+..++.++..++.|+ -..+- +|++..-
T Consensus 554 ~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~g-VDGfR-~Da~~~~---- 627 (921)
T 2wan_A 554 YNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYH-VDGFR-FDLMALL---- 627 (921)
T ss_dssp TTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHC-CCEEE-ETTGGGG----
T ss_pred cccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcC-CCEEE-ecccccc----
Confidence 5443321 000 000100 0111222 5677788888888888773 23333 5555432
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 184 VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
. ..+.+++.+++++.+|+..++ +..|
T Consensus 628 -~----~~~~~~~~~~l~~~~p~~~li-gE~w 653 (921)
T 2wan_A 628 -G----KDTMAKISNELHAINPGIVLY-GEPW 653 (921)
T ss_dssp -C----HHHHHHHHHHHHHHCTTCEEE-ECSS
T ss_pred -C----HHHHHHHHHHHHHhCCceEEE-Eecc
Confidence 1 235566777888889976554 4444
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.11 Score=51.12 Aligned_cols=139 Identities=9% Similarity=-0.033 Sum_probs=78.1
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCC---CCCC-----cc--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPT---PPKP-----FV--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~---~~~~-----~~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~ 130 (341)
.+-++.|+++|+|+|=|. |. ....... ...+ .+ -+..+.++++|+.|+++||+||+|+ |..+...
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~-~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~ 229 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLV-ENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHW 229 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCE-ECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSG
T ss_pred HHHHHHHHHcCCCEEEECccc-cCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcch
Confidence 456889999999999983 32 1100000 0000 11 1468999999999999999999998 3332110
Q ss_pred ---C-----------CCCCCCC-----CC--------------------CccCCc-hhHHHHHHHHHHHHHHHhCCCCce
Q 019395 131 ---N-----------GNEHSAT-----RD--------------------GFQEWG-DSNVADTVAVIDFLAARYANRPSL 170 (341)
Q Consensus 131 ---~-----------~~~~~g~-----~~--------------------~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v 170 (341)
. ++..+.. .. ....+. +..++..++.++.+++.|+ -..+
T Consensus 230 ~~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~G-VDGf 308 (601)
T 3edf_A 230 WMKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAG-LSGL 308 (601)
T ss_dssp GGGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHT-CSEE
T ss_pred hhhhCCccCceeeCCCCCCCccccccccCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcC-CCEE
Confidence 0 0000000 00 001122 5566777778888886662 2333
Q ss_pred eEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 171 AAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 171 ~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
- +|..+... ..+.+++.+++++..|+..+ ++..|.
T Consensus 309 R-lD~~~~~~---------~~f~~~~~~~v~~~~p~~~~-vgE~~~ 343 (601)
T 3edf_A 309 R-IDTYGYSD---------GAFLTEYTRRLMAEYPRLNM-VGQEWS 343 (601)
T ss_dssp E-ESSGGGSC---------HHHHHHHHHHHHHHCTTCEE-EECCCC
T ss_pred E-eeccccCC---------HHHHHHHHHHHHHhCCCeEE-EeeecC
Confidence 3 45554432 34566777788888887654 455443
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.026 Score=54.59 Aligned_cols=105 Identities=21% Similarity=0.250 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHcCC-eEEEecCCCCC-----CCCCCCCCCCCCCccCCc-------------hh---HHHHHHHHHHHHH
Q 019395 104 VLDNAFDWAEKYGV-KVIVDLHAAPG-----SQNGNEHSATRDGFQEWG-------------DS---NVADTVAVIDFLA 161 (341)
Q Consensus 104 ~ld~~i~~a~~~gi-~vildlh~~~g-----~~~~~~~~g~~~~~~~w~-------------~~---~~~~~~~~~~~la 161 (341)
.+++++++|++.|. .+|+.+.-... ..+-.+.+..+ ...|. +. ......++++.|.
T Consensus 89 ~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~--~~~w~~~~~~~~~~~~~~p~~~~g~~~~~ewv~yl~ 166 (519)
T 2e4t_A 89 VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAP--SSRWKEVKFEKGAPFSLTPDTEDDYVYMDEFVNYLV 166 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSS--STTEEEEESCCCSCCCSSCCTTSSEEEHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCC--cccccccccccCCccccCCCCCCChHHHHHHHHHHH
Confidence 69999999999998 99998874321 00000000000 00011 10 1112455667777
Q ss_pred HHhCCC--C-ceeEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCceEE
Q 019395 162 ARYANR--P-SLAAIELINEPLA----------PGVALDTLKSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 162 ~~y~~~--~-~v~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~v~ 210 (341)
.+++.. | .|-.|+|.|||.. ...+.+++.+.+.+.++++|.++|+..++
T Consensus 167 ~~nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l~ 228 (519)
T 2e4t_A 167 NKYGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEIF 228 (519)
T ss_dssp HHHCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HhcCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 777553 3 4777899999932 12367899999999999999999986654
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=95.99 E-value=0.2 Score=47.44 Aligned_cols=206 Identities=10% Similarity=0.053 Sum_probs=108.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCC-CCCCCCCCccCCc-hhHHHHHHHHHHHHH---HHhCCCC----ce
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGN-EHSATRDGFQEWG-DSNVADTVAVIDFLA---ARYANRP----SL 170 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~-~~~g~~~~~~~w~-~~~~~~~~~~~~~la---~~y~~~~----~v 170 (341)
..+.+.+.+.++.++|=-|-+..|-. |.....+ +.++... ...-. ...-..+...++.|+ +.+++.. -|
T Consensus 90 ~~~~i~~~i~~~~~rGGIvTlsWH~~np~tg~~~~dts~~~~-~~ilpGg~~~~~y~~~l~~iA~~l~~Lk~~~g~gvPV 168 (475)
T 3tp4_A 90 NIALFADYIRKADAIGGVNTVGAGVENFVTGGSFYDTSGDTL-RAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPI 168 (475)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEESGGGSTTSTTCC---CHH-HHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCE
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCcccCCHHHH-HHhcCCCchhHHHHHHHHHHHHHHHhhccccCCCceE
Confidence 46678888888999999999999963 1111111 1111000 00000 011234445555544 4566521 23
Q ss_pred eEEEeecCCCCCC-------CChHHHHHHHHHHHHHHHhc-CCCceEEEeCCCC--CCChhhhhhccCCCC-cEEEEeee
Q 019395 171 AAIELINEPLAPG-------VALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLG--PADHKELLSFASGLS-RVVIDVHY 239 (341)
Q Consensus 171 ~~~el~NEP~~~~-------~~~~~~~~~~~~~~~aIR~~-~p~~~v~~~~~~~--~~~~~~~~~~~~~~~-~~v~~~H~ 239 (341)
+ |-+..|.++.- .+++.++++++.+++++|+. +-+.++++=++.. +.+...+....++++ =.++.+-.
T Consensus 169 l-~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YPGDdyVDiVG~D~ 247 (475)
T 3tp4_A 169 V-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 247 (475)
T ss_dssp E-EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred E-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCCCCCeEEEEEEec
Confidence 3 78999998631 14678999999999999964 4344555432211 112334444433443 34777777
Q ss_pred cCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC--CCCCCHHHHHHHHHHHHHHHccC----CC
Q 019395 240 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN--VKDASKQDYQRFANAQLDVYGRA----TF 313 (341)
Q Consensus 240 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~ 313 (341)
|.... . ....+.+. .....+..+++..++|+.|+|||.... ..+.+. ..|+++.+.++.+. .+
T Consensus 248 Y~~~~----~---~~f~~~~~-~~l~~l~~~A~~~gKpiaItE~G~~~~~~~~G~~d---a~W~t~~l~~i~~~P~v~~i 316 (475)
T 3tp4_A 248 YDSTG----S---DAFLAGLV-ADLRMIAEIADEKGKVSAFTRFGVSGGVGTNGSSP---AQWFTKVLAAIKADPVASRN 316 (475)
T ss_dssp EESSC----C---HHHHHHHH-HHHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCC---TTHHHHHHHHHHTCTTTTCC
T ss_pred cCCCC----c---hhHHHHHH-HHHHHHHHHHhhCCCcEEEEeeccCCCcccCCCch---HHHHHHHHHHHHhCccccee
Confidence 75421 1 11111111 122344455665678899999998641 111111 34666666666653 45
Q ss_pred cEE-Eec
Q 019395 314 GWA-YWA 319 (341)
Q Consensus 314 Gw~-~W~ 319 (341)
.|+ +|.
T Consensus 317 aYvl~Wr 323 (475)
T 3tp4_A 317 AYMETGE 323 (475)
T ss_dssp CEEEECC
T ss_pred EEEEEEc
Confidence 554 565
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=95.95 E-value=0.085 Score=53.20 Aligned_cols=102 Identities=15% Similarity=0.220 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHcCCeEEEec---CCCCCC-----CCCC----CCCCCCC-----CccCCc-hhHHHHHHHHHHHHHHH
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGN----EHSATRD-----GFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildl---h~~~g~-----~~~~----~~~g~~~-----~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
.+.|+++|+.|+++||+||||+ |..++. ...+ +..|... +..... +...+..++.++..++.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e 333 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 333 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999997 333210 0000 0011100 000111 45677777888888887
Q ss_pred hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 164 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
|+ -..+- +|++... +.+ +++.+..++++.+|+..++ +..|
T Consensus 334 ~~-vDGfR-~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~li-gE~w 373 (714)
T 2ya0_A 334 YK-VDGFR-FDMMGDH-----DAA----SIEEAYKAARALNPNLIML-GEGW 373 (714)
T ss_dssp HC-CCEEE-ETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEE-ECCC
T ss_pred hC-ceEEE-EeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEE-eccc
Confidence 73 23333 5555432 222 3446667788889976554 4444
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.1 Score=53.64 Aligned_cols=103 Identities=13% Similarity=0.207 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHcCCeEEEec---CCCCCC-----CCCC----CCCCCCC-----CccCC-chhHHHHHHHHHHHHHHH
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGN----EHSATRD-----GFQEW-GDSNVADTVAVIDFLAAR 163 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildl---h~~~g~-----~~~~----~~~g~~~-----~~~~w-~~~~~~~~~~~~~~la~~ 163 (341)
++.|+++|+.|+++||+||||+ |..++. ...+ +..|... ..... .+...+..++.++.+++.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e 448 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE 448 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999997 444321 0000 0111100 00111 156777888888999887
Q ss_pred hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 164 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
|+ -..+- +|++-. .+ ..+.+.++.++|+.+|+. ++++..|.
T Consensus 449 ~g-VDGFR-fD~a~~-----~~----~~~~~~~~~~~~~~~P~~-~ligE~Wd 489 (877)
T 3faw_A 449 FK-VDGFR-FDMMGD-----HD----AAAIELAYKEAKAINPNM-IMIGEGWR 489 (877)
T ss_dssp HC-CCEEE-ETTGGG-----SB----HHHHHHHHHHHHHHCTTC-EEEECCCS
T ss_pred cC-CcEEE-EecCCc-----CC----HHHHHHHHHHHHhhCCCc-EEEEcccc
Confidence 73 22232 455422 12 234567778888889976 45565554
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=95.62 E-value=0.44 Score=44.16 Aligned_cols=128 Identities=11% Similarity=0.104 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHH---hCCC----CceeEEEeecCCCCC-----C--CChHHHHHHHHHHHHHHH-hcCCCceEEEeCCCC
Q 019395 152 DTVAVIDFLAAR---YANR----PSLAAIELINEPLAP-----G--VALDTLKSYYKAGYDAVR-KYTSTAYVIMSNRLG 216 (341)
Q Consensus 152 ~~~~~~~~la~~---y~~~----~~v~~~el~NEP~~~-----~--~~~~~~~~~~~~~~~aIR-~~~p~~~v~~~~~~~ 216 (341)
.+.+.++.+|+. +++. ..|+ |-+..|.++. . .+++.++++++.+++++| +.+-+.++.+=++..
T Consensus 143 ~~~~~id~iA~~l~~l~~~~G~~vPV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~~ 221 (386)
T 1odz_A 143 VLNGYLDQVAEWANNLKDEQGRLIPVI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNN 221 (386)
T ss_dssp HHHHHHHHHHHHHHTCBCTTSCBCCEE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhhccCCCceEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCCC
Confidence 455556665554 4432 1233 7899999862 1 247899999999999999 555566666643322
Q ss_pred C--CChhhhhhccCCCC-cEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCC
Q 019395 217 P--ADHKELLSFASGLS-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 287 (341)
Q Consensus 217 ~--~~~~~~~~~~~~~~-~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~ 287 (341)
. .....+....++++ =.++.+-.|...... .+ ..+.+. .....+..+++..++|+.|+|+|...
T Consensus 222 ~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~~---~~---f~~~~~-~~l~~~~~~A~~~~Kpial~E~G~~~ 288 (386)
T 1odz_A 222 FWDVTEANYLERYPGDEWVDVLGFDTYGPVADN---AD---WFRNVV-ANAALVARMAEARGKIPVISGIGIRA 288 (386)
T ss_dssp CSSCCHHHHHSSCCCTTTCSEECCEEEECSSSC---HH---HHHHHH-HHHHHHHHHHHHHTCEECBCEEEECH
T ss_pred CCCCCccchhhcCCCCCeEEEEEEeccCCCCCC---cc---HHHHHH-HHHHHHHHHhhcCCCeEEEEeccCCC
Confidence 1 12234444433443 357777777542211 01 111111 11223444555557889999999754
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.21 Score=47.27 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccC-----------CCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIAND-----------PTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~-----------~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+++|=|+ +. ..... +......+ -+..+.|+++|+.|+++||+||+|+
T Consensus 33 ~~~l~yl~~lG~~~i~l~Pi~-~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~ 104 (449)
T 3dhu_A 33 TADLQRIKDLGTDILWLLPIN-PIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDI 104 (449)
T ss_dssp HTTHHHHHHHTCSEEEECCCS-CBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHHcCCCEEEECCcc-cccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 345789999999999984 32 11000 00000111 1367999999999999999999998
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=95.47 E-value=0.021 Score=55.41 Aligned_cols=53 Identities=25% Similarity=0.458 Sum_probs=38.6
Q ss_pred HHHHHHHCCCCEEEc-CcccccccCCCCCCCc--------cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 67 DFKFLSSNGINAVRI-PVGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 67 d~~~i~~~G~N~VRl-pi~~~~~~~~~~~~~~--------~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
-|+.||++|+|+|=| ||. ..|.....| ++ +..+.++++|+.|+++||+||||+
T Consensus 37 kLdYLk~LGvt~I~L~Pi~----~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 37 RLDYLEKLGIDAIWLSPVY----QSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp THHHHHHHTCSEEEECCCE----ECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHCCCCEEEeCCCc----CCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 478999999999998 331 111110111 11 468999999999999999999998
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=95.24 E-value=0.21 Score=52.24 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEec---CCCCCC-----CCCC----CCCCCCC-----CccCCc-hhHHHHHHHHHHHHHHH
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDL---HAAPGS-----QNGN----EHSATRD-----GFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildl---h~~~g~-----~~~~----~~~g~~~-----~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
.+.|+++|+.|+++||+||||+ |..++. ...+ +..|... +..... +...+..++.++..++.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~e 640 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 640 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999997 433211 0000 0011100 000111 45677778888888887
Q ss_pred hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 164 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
|+= ..+- +|++.+. +.+ +++.+..++++.+|+..++ +..|
T Consensus 641 ~gv-DGfR-~D~~~~~-----~~~----~~~~~~~~~~~~~p~~~li-gE~W 680 (1014)
T 2ya1_A 641 YKV-DGFR-FDMMGDH-----DAA----SIEEAYKAARALNPNLIML-GEGW 680 (1014)
T ss_dssp HCC-CEEE-ETTGGGS-----BHH----HHHHHHHHHHHHCTTCEEE-ECCC
T ss_pred cCc-eEEE-EeCCCCC-----CHH----HHHHHHHHHHHhCCCeEEE-Eeec
Confidence 732 2333 5555432 222 3456677788889976554 4444
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=94.84 E-value=0.43 Score=50.16 Aligned_cols=102 Identities=10% Similarity=0.145 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHc-CCeEEEec---CCCCCCC----CC--------CC----CCCCCC-----CccCCc-hhHHHHHHH
Q 019395 102 SKVLDNAFDWAEKY-GVKVIVDL---HAAPGSQ----NG--------NE----HSATRD-----GFQEWG-DSNVADTVA 155 (341)
Q Consensus 102 l~~ld~~i~~a~~~-gi~vildl---h~~~g~~----~~--------~~----~~g~~~-----~~~~w~-~~~~~~~~~ 155 (341)
.+.|+++|+.|+++ ||+||||+ |..+... +. +. ..|... +...+. +...+..++
T Consensus 581 ~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~dln~~~p~Vr~~i~d 660 (1083)
T 2fhf_A 581 IKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIAD 660 (1083)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSEEBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCCCCCceecCCccCCcCcCCHHHHHHHHH
Confidence 78999999999998 99999997 4333210 00 00 001000 011122 556677778
Q ss_pred HHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 156 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 156 ~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
.++..+++|+ -..+- +|+++... ..+..++.+++|+.+|+..+ ++..|
T Consensus 661 ~l~~W~~e~g-VDGfR-~D~a~~~~---------~~~~~~~~~~l~~~~p~~~l-igE~w 708 (1083)
T 2fhf_A 661 SLAVWTTDYK-IDGFR-FDLMLYHP---------KAQILSAWERIKALNPDIYF-FGEGW 708 (1083)
T ss_dssp HHHHHHHHHC-CCEEE-ETTGGGSB---------HHHHHHHHHHHHTTCTTCEE-EECCC
T ss_pred HHHHHHHHhC-CcEEE-EeCcccCC---------HHHHHHHHHHHHHhCCCeEE-EEeec
Confidence 8888888873 23333 56665421 23556677788899997654 45444
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=94.83 E-value=0.28 Score=50.31 Aligned_cols=174 Identities=13% Similarity=0.143 Sum_probs=101.7
Q ss_pred HhhccCHHHHHHHHHCCCCEEEcCcccc----cc---------------cCCC------------CCCCccc----chHH
Q 019395 59 WDSYITDEDFKFLSSNGINAVRIPVGWW----IA---------------NDPT------------PPKPFVG----GSSK 103 (341)
Q Consensus 59 ~~~~~~e~d~~~i~~~G~N~VRlpi~~~----~~---------------~~~~------------~~~~~~~----~~l~ 103 (341)
|..| |..|++||=.|+|..=-.++-+ .. ..|. -++|+.+ ..++
T Consensus 310 W~rW--EreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~ 387 (914)
T 4a4a_A 310 WDQY--EEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAE 387 (914)
T ss_dssp HHHH--HHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHH
T ss_pred hHHH--HHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHH
Confidence 5555 9999999999999765323210 00 0010 1234432 3455
Q ss_pred HHHHHHHHHHHcCCeEEEecCCC--C--------CC---CCCCCCCCCCCC---ccCCc----hhHHHHHHHHHHHHHHH
Q 019395 104 VLDNAFDWAEKYGVKVIVDLHAA--P--------GS---QNGNEHSATRDG---FQEWG----DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 104 ~ld~~i~~a~~~gi~vildlh~~--~--------g~---~~~~~~~g~~~~---~~~w~----~~~~~~~~~~~~~la~~ 163 (341)
.=++|++..++.||.+||=-+.. | .. .-+.+ +|-... .+.+. +-..+-...|++...+.
T Consensus 388 Lq~kIl~RmrelGM~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W-~gf~~~~~~~~~~l~p~dplF~~i~~~F~~~q~~~ 466 (914)
T 4a4a_A 388 LGRKMHDRMQSFGINPVLQGYSGMVPRDFKEKNQEAQTISQGGW-CGFDRPDMLKTYVNEGEADYFQKVADVFYEKQKEV 466 (914)
T ss_dssp HHHHHHHHHHHHTCEEEEECCSCEECTTHHHHSTTCCEECCCEE-TTEECCEEECSSCCTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeecCCCcCCCCChHHHhhCCCCeeecCCCC-CCCCCchhcccccCCCCChHHHHHHHHHHHHHHHH
Confidence 55679999999999999832211 1 11 00001 110000 01111 34556667888899999
Q ss_pred hCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhhhccCC-CCcEEEEee
Q 019395 164 YANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASG-LSRVVIDVH 238 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~~~-~~~~v~~~H 238 (341)
|++..++.+.|++||-..++. ..+....+.+++++++++|+.+=++. +|.......++.-.+. .+-+|+|.+
T Consensus 467 yG~~~h~Y~~D~FnE~~~~~~--~~l~~~~~~v~~am~~~dp~AvWv~Q-gW~~~~~~~~L~~vp~~~~mlvLDL~ 539 (914)
T 4a4a_A 467 FGDVTNFYGVDPFHQGGNTGD--LDNGKIYEIIQNKMIEHDNDAVWVIQ-NWQGNPSNNKLEGLTKKDQAMVLDLF 539 (914)
T ss_dssp HCSCCSEEECCTTTTSCCCTT--CCHHHHHHHHHHHHHHHCTTCEEEEE-EBTTBSCHHHHTTCSCGGGEEEEETT
T ss_pred hCCcccccccCccccCCCCCC--cCHHHHHHHHHHHHHHhCCCCEEEEc-ccCCCChHHHHhCCCCCCCEEEEEcc
Confidence 987788999999999532111 24778899999999999999754443 3432222344443333 455677764
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=94.65 E-value=0.068 Score=51.86 Aligned_cols=58 Identities=24% Similarity=0.283 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccC-----CCC------CCCcc--c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIAND-----PTP------PKPFV--G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~-----~~~------~~~~~--~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|. +. ..... +.+ ...++ + +..+.|+++|+.|+++||+||+|+
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~-e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~ 113 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPW-RDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-CCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCcc-ccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 456899999999999983 32 10000 000 00112 2 368999999999999999999997
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=94.61 E-value=0.21 Score=50.40 Aligned_cols=58 Identities=22% Similarity=0.361 Sum_probs=38.8
Q ss_pred HHHHHHHHCCCCEEEcC-cccccc--------------cCCCCC----CCccc-----chHHHHHHHHHHHHHcCCeEEE
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIA--------------NDPTPP----KPFVG-----GSSKVLDNAFDWAEKYGVKVIV 121 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~--------------~~~~~~----~~~~~-----~~l~~ld~~i~~a~~~gi~vil 121 (341)
.-++.|+++|+|+|=|. |.-... -++... ..|-. ..++.|+++|+.|+++||+|||
T Consensus 206 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~Vil 285 (718)
T 2vr5_A 206 QMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVII 285 (718)
T ss_dssp HHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred hhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEE
Confidence 46999999999999983 321100 000000 01111 1279999999999999999999
Q ss_pred ec
Q 019395 122 DL 123 (341)
Q Consensus 122 dl 123 (341)
|+
T Consensus 286 Dv 287 (718)
T 2vr5_A 286 DV 287 (718)
T ss_dssp EE
T ss_pred Ee
Confidence 97
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=94.58 E-value=0.068 Score=50.55 Aligned_cols=59 Identities=25% Similarity=0.326 Sum_probs=39.4
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccc---cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIA---NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~---~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|+ |.-... -++......++ +..+.++++|+.|+++||+||+|+
T Consensus 26 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 90 (441)
T 1lwj_A 26 KNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (441)
T ss_dssp HHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 345789999999999983 321000 00000000111 368999999999999999999998
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=94.55 E-value=0.16 Score=49.56 Aligned_cols=57 Identities=23% Similarity=0.297 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCC--CCCC---c--c--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPT--PPKP---F--V--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~--~~~~---~--~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+ +. .+.... ...+ | + -+..+.++++|+.|+++||+||+|+
T Consensus 122 ~~~l~~l~~lG~~~v~l~Pi~--~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 188 (558)
T 3vgf_A 122 IRKLDYLKDLGITAIEIMPIA--QFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDV 188 (558)
T ss_dssp HHTHHHHHHHTCCEEEECCCE--ECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECCcc--cCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 456899999999999983 31 111100 0011 1 1 1358999999999999999999998
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=94.53 E-value=0.041 Score=52.39 Aligned_cols=58 Identities=22% Similarity=0.487 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcC-cc-----------cccccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VG-----------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~-----------~~~~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-.+.|+++||++|=|+ +. ||..-+|... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy-~i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCc-eeCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 444467999999999994 21 1211122111 1122 468999999999999999999997
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=94.52 E-value=0.042 Score=52.16 Aligned_cols=58 Identities=22% Similarity=0.468 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCCEEEcC-cc-------cccccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VG-------WWIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~-------~~~~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-++.|+++|+|+|=|+ +. |+..-++.. ...++ +..+.++++|+.|+++||+||||+
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~-y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVS-YELQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSC-SCSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccc-cccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 444689999999999983 31 110111111 11122 468999999999999999999997
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=94.40 E-value=0.065 Score=52.40 Aligned_cols=57 Identities=19% Similarity=0.300 Sum_probs=39.3
Q ss_pred HHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+++|=|. |. ..-....+..+ .++ +..+.++++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~-~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVY-ESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34789999999999984 32 11100011111 111 468999999999999999999998
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=94.33 E-value=0.088 Score=49.19 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccc---ccCCCCCCCcc-c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWI---ANDPTPPKPFV-G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~---~~~~~~~~~~~-~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|+ +.-.. .-++......+ + +..+.|+++|+.|+++||+||+|+
T Consensus 24 ~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 24 MGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp HTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 345789999999999984 32110 00111111122 2 468999999999999999999997
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=94.28 E-value=0.071 Score=52.27 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=39.3
Q ss_pred HHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+++|=|. |. ..-....+..+ .++ +..+.++++|+.|+++||+||||+
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~-~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 113 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHY-DSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 113 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999984 31 11000001011 111 468999999999999999999997
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=94.23 E-value=0.075 Score=51.88 Aligned_cols=58 Identities=26% Similarity=0.346 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|+ |.- .-....+..+ .++ +..+.|+++|+.|+++||+||+|+
T Consensus 34 ~~~ldyl~~lGv~~i~l~Pi~~-~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 99 (555)
T 2ze0_A 34 IEKLDYLVELGVDIVWICPIYR-SPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDL 99 (555)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-CCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccc-CCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 345889999999999983 321 1110011111 111 368999999999999999999997
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=94.22 E-value=0.075 Score=51.93 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|. |.- .-....+..+ .++ +..+.++++|+.|+++||+||||+
T Consensus 35 ~~~Ldyl~~LGv~~I~L~Pi~~-~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 100 (557)
T 1zja_A 35 TEKLDYLKGLGIDAIWINPHYA-SPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDV 100 (557)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCcc-CCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 345789999999999983 321 1000000001 111 468999999999999999999998
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=94.13 E-value=0.063 Score=51.49 Aligned_cols=137 Identities=14% Similarity=0.235 Sum_probs=78.2
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCC---
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQ--- 130 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~--- 130 (341)
.+-++.|+++|+|+|=|. | +. ........+ .++ +..+.++++|+.|+++||+||+|+ |..+...
T Consensus 59 ~~~LdyL~~LGv~~I~L~Pi-~~-~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~ 136 (488)
T 2wc7_A 59 MEDLDYIQNLGINAIYFTPI-FQ-SASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFH 136 (488)
T ss_dssp HHTHHHHHHHTCCEEEESCC-EE-ECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHH
T ss_pred HHhhHHHHHcCCCEEEECCC-CC-CCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCHHHH
Confidence 356899999999999984 3 11 100000011 111 368999999999999999999998 4332110
Q ss_pred --------C---------CCC---CCCC-CCC-----------ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeec
Q 019395 131 --------N---------GNE---HSAT-RDG-----------FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELIN 177 (341)
Q Consensus 131 --------~---------~~~---~~g~-~~~-----------~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~N 177 (341)
+ .+. ..+. ... ...|. +..++..++.++..+ .| +-..+- +|.++
T Consensus 137 ~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~-gvDGfR-~D~~~ 213 (488)
T 2wc7_A 137 DVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KF-GIDGWR-LDVPF 213 (488)
T ss_dssp HHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HH-TCCEEE-ESSGG
T ss_pred HHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHH-HC-CCCEEE-Eeccc
Confidence 0 000 0000 000 11122 566777777777777 44 333444 66676
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 178 EPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 178 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
+... + .+.+++.+++++..|+..+ ++..|
T Consensus 214 ~i~~-----~---~~~~~~~~~~~~~~p~~~~-vgE~~ 242 (488)
T 2wc7_A 214 EIKT-----P---GFWQEFRDRTKAINPEAYI-VGEVW 242 (488)
T ss_dssp GCCC-----T---THHHHHHHHHHHHCTTCEE-EECCC
T ss_pred ccCh-----H---HHHHHHHHHHHhhCCCeEE-EEEec
Confidence 6431 1 2556667778888887654 45444
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.2 Score=49.90 Aligned_cols=58 Identities=21% Similarity=0.350 Sum_probs=39.0
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccC-----------CCC-------CCCccc---chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAND-----------PTP-------PKPFVG---GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~-----------~~~-------~~~~~~---~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.-++.|+++|+|+|=| ||.-..... ... ...|-. ...+.|+++|+.|+++||+||||+
T Consensus 183 ~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~ 262 (657)
T 2wsk_A 183 VMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDI 262 (657)
T ss_dssp HHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4599999999999998 332110000 000 011211 148999999999999999999997
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.057 Score=53.74 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=39.1
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccCCCCC--CC-----cc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIANDPTPP--KP-----FV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~--~~-----~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-|+.|+++|+|+|=| ||. ..+... .+ .+ =+..+.++++|+.|+++||+||||+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif----~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIF----SSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCE----EESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCC----CCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 4578999999999998 441 111110 00 11 1468999999999999999999998
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=94.04 E-value=0.1 Score=49.79 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCC----CCCCCcc----------cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDP----TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~----~~~~~~~----------~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=| |+.- ..... .....|+ -+..+.++++|+.|+++||+||||+
T Consensus 46 ~~~LdyL~~lGvt~I~l~Pi~~-~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (478)
T 2guy_A 46 IDKLDYIQGMGFTAIWITPVTA-QLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (478)
T ss_dssp HHTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccc-CCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34578999999999999 4421 11000 0000111 1358999999999999999999997
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=94.03 E-value=0.076 Score=51.69 Aligned_cols=57 Identities=25% Similarity=0.332 Sum_probs=39.4
Q ss_pred HHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+|+|=|. |. ..-....+..+ .++ +..+.++++|+.|+++||+||+|+
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~-~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVY-DSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDL 99 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCE-ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999983 32 11000001011 111 468999999999999999999998
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=93.98 E-value=0.36 Score=48.85 Aligned_cols=22 Identities=18% Similarity=0.288 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCCeEEEec
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.|+++|+.|+++||+||||+
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDv 293 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDV 293 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEE
Confidence 8999999999999999999997
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=93.96 E-value=0.099 Score=50.04 Aligned_cols=58 Identities=28% Similarity=0.367 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC--CC--------CC------ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT--PP--------KP------FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~--------~~------~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+++|=|+=-+. ...+. +. +. .++ +..+.|+++|+.|+++||+||||+
T Consensus 28 ~~~LdyL~~LGvt~IwL~Pi~~-~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 28 NSDASNLKSKGITAVWIPPAWK-GASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHHTCCEEEECCCSE-ESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccc-CCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3457899999999999841111 10110 00 00 122 468999999999999999999997
|
| >2ddx_A Beta-1,3-xylanase; glycoside hydrolase, TIM barrel, hydrola; 0.86A {Vibrio SP} | Back alignment and structure |
|---|
Probab=93.90 E-value=0.35 Score=43.82 Aligned_cols=118 Identities=19% Similarity=0.177 Sum_probs=65.2
Q ss_pred HHHHHHHHHhCCCCceeEEEeecCCCCC--CCChHHHHHHHHHHHHHHHhcC--CCceEEEeC-CCCCCChhhhhhccCC
Q 019395 155 AVIDFLAARYANRPSLAAIELINEPLAP--GVALDTLKSYYKAGYDAVRKYT--STAYVIMSN-RLGPADHKELLSFASG 229 (341)
Q Consensus 155 ~~~~~la~~y~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~~aIR~~~--p~~~v~~~~-~~~~~~~~~~~~~~~~ 229 (341)
+.++.+++..++...-+.|-+..|.++. +.+++.+++.++.+++++|+.+ ++.+.+... .........+....++
T Consensus 93 ~~i~~~a~~l~~~gvPV~~R~~HEmnG~W~~~~p~~y~~~wr~v~d~~r~~g~~~N~~wvWspn~~~p~~~~~~~~~YPG 172 (333)
T 2ddx_A 93 ANIDTLLNTLAGYDRPVYLRWAYEVDGPWNGHSPSGIVTSFQYVHDRIIALGHQAKISLVWQVASYCPTPGGQLDQWWPG 172 (333)
T ss_dssp HHHHHHHHHHHTTCSCEEEEETSSTTCGGGCCCHHHHHHHHHHHHHHHHHHTCTTTEEEEEECCCCTTSCSSCCGGGCCC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCCcCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEeCCCCCCCCCCchhhcCCC
Confidence 3445555554443222337899999863 3567899999999999999986 444433332 1111111223333233
Q ss_pred CC-cEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCC
Q 019395 230 LS-RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286 (341)
Q Consensus 230 ~~-~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~ 286 (341)
++ =.++.+-.|.+-. . + ...++ .+..+++..++|+.|+|+|..
T Consensus 173 DdyVDivG~D~Y~~~~--~---~----~~~~~-----~~~~~a~~~~KPi~i~E~G~~ 216 (333)
T 2ddx_A 173 SEYVDWVGLSYFAPQD--C---N----WDRVN-----EAAQFARSKGKPLFLNESTPQ 216 (333)
T ss_dssp GGGCSEEEEEESSGGG--G---T----THHHH-----HHHHHHHHHTCCEEEEEECCT
T ss_pred CCEEEEEEEeccCCCC--c---C----HHHHH-----HHHHHHhcCCCcEEEeccCCc
Confidence 32 2467777785311 0 0 11111 122334455788999999975
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.11 Score=49.72 Aligned_cols=58 Identities=24% Similarity=0.324 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCC-C---------C------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTP-P---------K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~-~---------~------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+++|=|+=-+. ...+.. + + ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~LdyL~~LGvt~I~l~Pi~~-~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 26 HDDAAALSDAGITAIWIPPAYK-GNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHHTCCEEEECCCSE-ESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccc-CCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4457899999999999841111 000000 0 0 0222 468999999999999999999997
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=93.77 E-value=0.11 Score=49.62 Aligned_cols=58 Identities=26% Similarity=0.280 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC--CC--------C------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT--PP--------K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~--------~------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+=-+. ...+. +. + ..++ +..+.|+++|+.|+++||+||||+
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~-~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYK-GLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSE-ESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEcCcccc-CCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4457899999999999842111 10100 00 0 0112 468999999999999999999997
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=93.75 E-value=0.11 Score=49.67 Aligned_cols=58 Identities=16% Similarity=0.259 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCC----CCCCCcc--------c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDP----TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~----~~~~~~~--------~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+ +. ...... .....|+ + +..+.++++|+.|+++||+||+|+
T Consensus 46 ~~~LdyL~~LGv~~I~l~Pi~-~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 46 IDHLDYIEGMGFTAIWISPIT-EQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HHTHHHHHTTTCCEEEECCCE-EECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCccc-cCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 445799999999999984 32 111000 0000111 1 358999999999999999999997
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=93.71 E-value=0.1 Score=51.31 Aligned_cols=57 Identities=19% Similarity=0.215 Sum_probs=39.1
Q ss_pred HHHHHHHHCCCCEEEcC-cccccccCCCCCCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+.++.|+++|+|+|=|. |. ..-....+..+ .++ +..+.++++|+.|+++||+||+|+
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~-~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 108 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFY-DSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDL 108 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCE-ECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCcc-cCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45789999999999983 31 11000001011 111 368999999999999999999997
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=93.67 E-value=0.14 Score=49.51 Aligned_cols=58 Identities=22% Similarity=0.255 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC--CC--------C------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT--PP--------K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~--------~------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+=-+. ...+. +. + ..++ +..+.|+++|+.|+++||+||||+
T Consensus 27 ~~~LdyLk~LGvt~IwL~Pi~~-~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 27 ANEANNLSSLGITALWLPPAYK-GTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHHTTCCEEEECCCSE-ESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccc-CCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4457999999999999841111 10100 00 0 0112 468999999999999999999997
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=93.54 E-value=1.6 Score=41.62 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=80.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc--cCCCCCCCcc-------cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA--NDPTPPKPFV-------GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~--~~~~~~~~~~-------~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
++-.+.++++|++.|=|--..-.. +=|+....++ ...-+.+.++++.|+++||++-+-++... ++
T Consensus 65 ~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d------~~ 138 (478)
T 3ues_A 65 DQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWD------RT 138 (478)
T ss_dssp HHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCC------SS
T ss_pred HHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHH------hC
Confidence 677888999999999884311000 0011111221 11247899999999999999998776542 11
Q ss_pred CCCCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC--CCCCCCChHHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 136 SATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINE--PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 136 ~g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE--P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
. +.+. +.+.+.+..-+++|..+|+....++ +|-.+. |..... ..++ .+.++.||+..|+.+|..
T Consensus 139 ~------~~y~~~~~y~~~~~~ql~EL~~~Yg~~~~~W-~Dg~~~~~~~~~~~-~~~~----~~~~~~i~~~qP~~vi~~ 206 (478)
T 3ues_A 139 E------ESYGKGKAYDDFYVGQLTELLTQYGPIFSVW-LDGANGEGKNGKTQ-YYDW----DRYYNVIRSLQPDAVISV 206 (478)
T ss_dssp C------TTTTSSHHHHHHHHHHHHHHHHSSSCCSEEE-ECCCCCCCTTSCCC-CCCH----HHHHHHHHHHCTTSEEEE
T ss_pred C------cccCchHHHHHHHHHHHHHHHhcCCcceEEE-eeCCCCCCCccchh-hhhH----HHHHHHHHHHCcCEEEEC
Confidence 0 1121 3566777788889999998766666 777663 221111 1123 468899999999987643
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=93.48 E-value=0.9 Score=43.18 Aligned_cols=129 Identities=15% Similarity=0.120 Sum_probs=79.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc--cCCCCCCCccc-------chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA--NDPTPPKPFVG-------GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~--~~~~~~~~~~~-------~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
++-.+.+|++|++.|=+--..-.. +=|+....++. ..-+.+.++++.|+++||++-+-++...- +
T Consensus 57 ~~w~~~~k~aGaky~v~takHHdGf~lw~S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~dw------~ 130 (469)
T 3eyp_A 57 RQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPHDR------H 130 (469)
T ss_dssp HHHHHHHHHTTCCEEEEEEECTTCCBSSCCTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSSCH------H
T ss_pred HHHHHHHHHcCCCEEEEEEEeCCCccccCCCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChhHh------C
Confidence 677888999999999873211000 00222122211 12388999999999999999998875321 0
Q ss_pred CCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEE
Q 019395 136 SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVI 210 (341)
Q Consensus 136 ~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~ 210 (341)
.. ..+.+. +.+.+.+..-+++|..+|+.-..++ +|-.+.+. .+......|. +.||+..|+.+|+
T Consensus 131 ~~---~~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~~lW-~Dg~~~~~---~~~~~~~~w~----~~i~~~qP~~vi~ 195 (469)
T 3eyp_A 131 EH---LSPLYTTERYKEYYAHQLGELMSDYGKIWETW-WDGAGADE---LTTPVYRHWY----KIVREKQPDCVIF 195 (469)
T ss_dssp HH---TSTTCCHHHHHHHHHHHHHHHHHSSCCCCEEE-CCCTTCTT---CCHHHHHHHH----HHHHHHCTTCEEE
T ss_pred CC---cCcccCcHHHHHHHHHHHHHHHhcCCcccEEE-eCCCCCCC---ccchhHhHHH----HHHHHHCcCcEEe
Confidence 00 001122 4566777778888999998655666 77666543 1223333333 8899999988664
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=93.36 E-value=0.14 Score=51.37 Aligned_cols=59 Identities=20% Similarity=0.280 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCC-----CCCCCcc--------c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDP-----TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~-----~~~~~~~--------~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+++|=|+=-+.....| .....|+ + +..+.++++|+.|+++||+||+|+
T Consensus 55 ~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 55 RQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 445789999999999984212111001 0000111 1 358999999999999999999997
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=93.34 E-value=0.055 Score=51.71 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc----------cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA----------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~----------~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-++.|+++|+++|=|+=-+... -++... ..++ +..+.++++|+.|+++||+||+|+
T Consensus 26 ~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy-~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~ 95 (471)
T 1jae_A 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (471)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccc-cccCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 444689999999999984211111 111111 1122 468999999999999999999997
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=93.23 E-value=0.14 Score=50.74 Aligned_cols=139 Identities=13% Similarity=0.196 Sum_probs=74.0
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCC--CCCCc-----c--cchHHHHHHHHHHHHHcCCeEEEecC---CCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPT--PPKPF-----V--GGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGSQN 131 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~--~~~~~-----~--~~~l~~ld~~i~~a~~~gi~vildlh---~~~g~~~ 131 (341)
.+-++.|+++|+|+|-|+ +. .+.... ...+. + -+..+.|+++|+.|+++||+||+|+- ..+.+.
T Consensus 157 ~~~L~yl~~lGv~~v~l~Pi~--~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~- 233 (618)
T 3m07_A 157 IAKLPYLAELGVTVIEVMPVA--QFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGN- 233 (618)
T ss_dssp HTTHHHHHHHTCCEEEECCCE--ECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-
T ss_pred HHHHHHHHHcCCCEEEeCChh--ccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCCcc-
Confidence 345789999999999983 31 111000 00010 1 13579999999999999999999973 222110
Q ss_pred CCCC-CCC---CCCccCC------c-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHH
Q 019395 132 GNEH-SAT---RDGFQEW------G-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAV 200 (341)
Q Consensus 132 ~~~~-~g~---~~~~~~w------~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aI 200 (341)
.... ... ......| . +...+..++.++.+++.|+= ..+- +|....-.. ..+ ..+.+++.++|
T Consensus 234 ~~~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gv-DGfR-~D~~~~~~~-~~~----~~f~~~l~~~v 306 (618)
T 3m07_A 234 YLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHL-DGLR-FDAIDQIED-SSA----RHVLVEIAQRI 306 (618)
T ss_dssp CHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTC-SEEE-ETTGGGCCC-CSS----SCHHHHHHHHH
T ss_pred cccccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCc-cEEE-ecchhhhcc-cch----HHHHHHHHHHH
Confidence 0000 000 0001112 2 56777778888888877632 2221 333322110 001 23555666777
Q ss_pred HhcCCC-ceEEEeC
Q 019395 201 RKYTST-AYVIMSN 213 (341)
Q Consensus 201 R~~~p~-~~v~~~~ 213 (341)
|+..|+ ..++++.
T Consensus 307 ~~~~p~~~~~li~E 320 (618)
T 3m07_A 307 REDITDRPIHLTTE 320 (618)
T ss_dssp HHHCCSSCCEEEEC
T ss_pred HHhCCCCCEEEEEE
Confidence 877775 3455554
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=93.23 E-value=0.06 Score=50.64 Aligned_cols=59 Identities=22% Similarity=0.279 Sum_probs=39.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCC-------CCCc--------cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTP-------PKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~-------~~~~--------~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+=-+.....+.. ...| ++ +..+.++++|+.|+++||+||+|+
T Consensus 20 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~ 95 (422)
T 1ua7_A 20 KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 34578999999999998321111000000 0001 11 468999999999999999999997
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=93.20 E-value=0.087 Score=54.25 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHcCCeEEEec
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildl 123 (341)
.++.++++|+.|+++||+||||+
T Consensus 377 ~~~efk~LV~~aH~~GIkVIlDv 399 (884)
T 4aio_A 377 RIIEYRQMVQALNRIGLRVVMDV 399 (884)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCceeeee
Confidence 47789999999999999999998
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=93.16 E-value=0.15 Score=50.28 Aligned_cols=137 Identities=12% Similarity=0.146 Sum_probs=74.6
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccC-CC-CCCCc-----cc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCCC-
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAND-PT-PPKPF-----VG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQN- 131 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~-~~-~~~~~-----~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~- 131 (341)
+-++.|+++|+|+|=| ||. .... .. ...+. ++ +..+.++++|+.|+++||+||+|+ |..+.+..
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~--~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~ 225 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLA--AFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYL 225 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCE--ECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCH
T ss_pred HHHHHHHHcCCCEEEECChh--hccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccCCccc
Confidence 4579999999999998 341 1110 00 00110 11 358999999999999999999998 43321110
Q ss_pred -CCC--C-CCC----CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHh
Q 019395 132 -GNE--H-SAT----RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRK 202 (341)
Q Consensus 132 -~~~--~-~g~----~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~ 202 (341)
.+. . ... ......|. +...+..++.++..++.|+ -..+- +|.++.-... .+. .+.+++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~g-vDGfR-~D~~~~i~~~-~~~----~fl~~~~~~v~~ 298 (602)
T 2bhu_A 226 SSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH-FDGLR-LDATPYMTDD-SET----HILTELAQEIHE 298 (602)
T ss_dssp HHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHC-CSEEE-ETTGGGCCCC-SSS----CHHHHHHHHHHT
T ss_pred cccCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhC-CCEEE-EechHhhhcc-chH----HHHHHHHHHHhh
Confidence 000 0 000 00011222 5667777788888887662 22332 4444433210 011 355566667777
Q ss_pred cCCCceEEEe
Q 019395 203 YTSTAYVIMS 212 (341)
Q Consensus 203 ~~p~~~v~~~ 212 (341)
. |+..++-+
T Consensus 299 ~-~~~~li~E 307 (602)
T 2bhu_A 299 L-GGTHLLLA 307 (602)
T ss_dssp T-CSCCEEEE
T ss_pred c-CCeEEEEE
Confidence 7 76655544
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=93.14 E-value=1.2 Score=44.09 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=38.7
Q ss_pred HHHHHHHH-CCCCEEEc-Ccccccc---cCCCCCCCccc--chHHHHHHHHHHHHHcC--C--eEEEec
Q 019395 66 EDFKFLSS-NGINAVRI-PVGWWIA---NDPTPPKPFVG--GSSKVLDNAFDWAEKYG--V--KVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~-~G~N~VRl-pi~~~~~---~~~~~~~~~~~--~~l~~ld~~i~~a~~~g--i--~vildl 123 (341)
+-++.|++ +|+|+|=| ||.-... -++......++ +..+.++++|+.|+++| | +||||+
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~ 263 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDG 263 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEE
Confidence 45789999 99999998 3321000 00000000011 35899999999999999 9 999998
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=92.94 E-value=0.083 Score=52.52 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccC--CC---CC---------CCccc------chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIAND--PT---PP---------KPFVG------GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~--~~---~~---------~~~~~------~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=| ||.-..... .. +. ..|.. ...+.++++|+.|+++||+||||+
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD~ 202 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDF 202 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEEE
Confidence 46689999999999998 331100000 00 00 01111 127999999999999999999997
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=92.85 E-value=0.19 Score=50.21 Aligned_cols=59 Identities=19% Similarity=0.289 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccc---ccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWI---ANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~---~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+++|-|+ |.-.. .-++......+ -+..+.++++|+.|+++||+||+|+
T Consensus 63 ~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~ 127 (669)
T 3k8k_A 63 TQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDY 127 (669)
T ss_dssp HTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 345889999999999984 31000 00111111111 1468999999999999999999997
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=92.84 E-value=0.15 Score=48.20 Aligned_cols=59 Identities=27% Similarity=0.296 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-------CCCCC---C------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-------DPTPP---K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-------~~~~~---~------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=|+=-+.... ++... + ..++ +..+.++++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 107 (435)
T 1mxg_A 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (435)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4558899999999999841111000 00000 0 1122 368999999999999999999997
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=92.83 E-value=0.12 Score=51.90 Aligned_cols=54 Identities=9% Similarity=0.212 Sum_probs=39.4
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCCCCCCCc--------c--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDPTPPKPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~~--------~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|. |. . .+.. ..| + -+..+.++++|+.|+++||+||||+
T Consensus 268 ~~kLdyLk~LGvt~IwL~Pi~-~---s~~~-~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 332 (696)
T 4aee_A 268 MKHIDHLEDLGVETIYLTPIF-S---STSY-HRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDI 332 (696)
T ss_dssp HTTHHHHHHHTCCEEEECCCE-E---ESSS-SCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhHHHHHcCCCEEEECCcc-c---CCCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEec
Confidence 445889999999999983 31 1 1110 111 1 1468999999999999999999997
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=92.53 E-value=0.22 Score=49.33 Aligned_cols=58 Identities=10% Similarity=0.161 Sum_probs=39.5
Q ss_pred HHHHHHHHCCCCEEEcC-ccccc------ccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWI------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~------~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+|+|=|. +.-.. .-++......++ +..+.++++|+.|+++||+||+|+
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45789999999999983 32100 000111111112 468999999999999999999998
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=92.51 E-value=0.24 Score=49.67 Aligned_cols=138 Identities=11% Similarity=0.154 Sum_probs=75.0
Q ss_pred HHHHHHHHCCCCEEEcCcccccccC-------------CCCCCCc------------cc--chHHHHHHHHHHHHHcCCe
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIAND-------------PTPPKPF------------VG--GSSKVLDNAFDWAEKYGVK 118 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~-------------~~~~~~~------------~~--~~l~~ld~~i~~a~~~gi~ 118 (341)
+-++.|+++|||+|=|+=-+..-.. ...+.+| ++ +..+.++++|+.|+++||+
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 4589999999999998421111000 0001111 11 3589999999999999999
Q ss_pred EEEecCCCCCCCCC----------CCCCCCC----CCc--------cCCc---hhHHHHHHHHHHHHHHHhCCCCceeEE
Q 019395 119 VIVDLHAAPGSQNG----------NEHSATR----DGF--------QEWG---DSNVADTVAVIDFLAARYANRPSLAAI 173 (341)
Q Consensus 119 vildlh~~~g~~~~----------~~~~g~~----~~~--------~~w~---~~~~~~~~~~~~~la~~y~~~~~v~~~ 173 (341)
||+|+--..+..+. ....|.. ... ..+. +..++..++.++.+.+ | +-..+- +
T Consensus 337 VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~-~-GVDGfR-l 413 (695)
T 3zss_A 337 IALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMD-H-GVRIFR-V 413 (695)
T ss_dssp EEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHH-T-TCCEEE-E
T ss_pred EEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHH-h-CCCEEE-e
Confidence 99997321111100 0000100 000 1111 3455666677777776 4 333332 4
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 174 ELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 174 el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
|..++- -..+.+++.++|++..|+..+ ++..|.
T Consensus 414 D~a~~~---------~~~f~~~~~~~v~~~~pd~~~-vgE~~~ 446 (695)
T 3zss_A 414 DNPHTK---------PVAFWERVIADINGTDPDVIF-LAEAFT 446 (695)
T ss_dssp SSGGGS---------CHHHHHHHHHHHHHHCTTCEE-EECCCS
T ss_pred cCcchh---------hHHHHHHHHHHHHhhCCCceE-EEeecC
Confidence 444321 245666777888888998755 455553
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=92.47 E-value=0.23 Score=49.37 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCCEEEc-Ccccccc------cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIA------NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~------~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=| |+.-... -++......++ +..+.++++|+.|+++||+||+|+
T Consensus 109 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~ 176 (644)
T 3czg_A 109 AERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADF 176 (644)
T ss_dssp HHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34579999999999998 3321100 00001011112 468999999999999999999997
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=92.44 E-value=1.1 Score=42.34 Aligned_cols=134 Identities=10% Similarity=0.012 Sum_probs=78.1
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccc--cCCCCCCCcccc----hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIA--NDPTPPKPFVGG----SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSA 137 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~--~~~~~~~~~~~~----~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g 137 (341)
.++-.+.+|++|++.|=|--..-.. +=|+....++.. .-+.|.++++.|+++||++-|-+|...-.... .+
T Consensus 80 p~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~~dw~~p~---y~ 156 (450)
T 2wvv_A 80 AKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSVMDWSNPD---YR 156 (450)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEESCCTTCTT---CC
T ss_pred HHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecHHHhcCCc---cc
Confidence 3677788899999999884211000 002221222211 25789999999999999999877754211000 00
Q ss_pred CCCCccCCc------hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceE
Q 019395 138 TRDGFQEWG------DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 138 ~~~~~~~w~------~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
. ...+. +.+.+.+..-+++|.++|+.-..++ +|-.++.. ...-.-...++++.||+..|+.+|
T Consensus 157 ~---~~~~~~~~~~~~~y~~~~~~Ql~ELlt~YG~~d~lW-fDg~~~~~-----~~~~~~~~~~~~~~i~~~qP~~vv 225 (450)
T 2wvv_A 157 Y---DIKSKEDSIAFSRFLEFTDNQLKELATRYPTVKDFW-FDGTWDAS-----VKKNGWWTAHAEQMLKELVPGVAI 225 (450)
T ss_dssp S---SCCSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCEEE-EESCCSHH-----HHHTHHHHHHHHHHHHHHSTTCEE
T ss_pred c---cccccccccchHHHHHHHHHHHHHHHHcCCCcCEEE-EcCCCCcC-----cchhhHHHHHHHHHHHHhCCcEEE
Confidence 0 01111 2345556667788999996544555 77644321 011223467788999999997655
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=92.19 E-value=0.19 Score=49.52 Aligned_cols=58 Identities=24% Similarity=0.201 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCC---CCC--------C------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDP---TPP--------K------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~---~~~--------~------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+++|=|+=-+. ...+ .+. + ..++ +..+.++++|+.|+++||+||+|+
T Consensus 153 ~~~LdyLk~LGvtaIwL~Pi~~-~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 153 AERAPELAEAGFTAVWLPPANK-GMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHHTCCEEECCCCSE-ETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccc-CCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4568899999999999842111 0000 000 0 1222 468999999999999999999997
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=91.95 E-value=0.22 Score=49.84 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=39.9
Q ss_pred HHHHH--HHHHCCCCEEEcCcccccccCC--------CCCCCcc--------c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFK--FLSSNGINAVRIPVGWWIANDP--------TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~--~i~~~G~N~VRlpi~~~~~~~~--------~~~~~~~--------~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++ .|+++|+++|=|.=-+.....+ .....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45688 9999999999984212110000 0001111 1 358999999999999999999997
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.95 E-value=0.21 Score=49.98 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=40.3
Q ss_pred HHHHH--HHHHCCCCEEEcCcccccccCC-------CCCCCcc--------c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFK--FLSSNGINAVRIPVGWWIANDP-------TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~--~i~~~G~N~VRlpi~~~~~~~~-------~~~~~~~--------~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++ .|+++|+|+|=|+=-+.....+ .....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 55 ~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 55 INKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45688 9999999999984212111000 0001121 1 368999999999999999999997
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=91.82 E-value=0.23 Score=49.69 Aligned_cols=59 Identities=24% Similarity=0.279 Sum_probs=39.9
Q ss_pred HHHHH--HHHHCCCCEEEcCcccccccCC---------CCCCCcc--------c--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFK--FLSSNGINAVRIPVGWWIANDP---------TPPKPFV--------G--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~--~i~~~G~N~VRlpi~~~~~~~~---------~~~~~~~--------~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++ .|+++|+++|=|+=-+.....+ .....|+ + +..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~ 137 (683)
T 3bmv_A 58 INKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (683)
T ss_dssp HHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45588 9999999999984212110000 0001111 1 358999999999999999999997
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=91.79 E-value=0.26 Score=49.06 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=39.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC--CCCC-----cc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT--PPKP-----FV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~--~~~~-----~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+++|=|+=.+....... +..+ .+ -+..+.++++|+.|+++||+||+|+
T Consensus 114 ~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~ 181 (655)
T 3ucq_A 114 EERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDL 181 (655)
T ss_dssp HTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4557899999999999952221100000 0011 11 1468999999999999999999997
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=91.26 E-value=0.29 Score=48.98 Aligned_cols=58 Identities=16% Similarity=0.266 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCc--------c--cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~--------~--~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-++.|+++|+++|=|+=-+. .. +.....| + -+..+.++++|+.|+++||+||+|+-
T Consensus 20 ~~~LdYLk~LGVtaIwLsPi~~-~~-~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 20 IDNLWYFXDLGVSHLYLSPVLM-AS-PGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-EC-TTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEECCccc-CC-CCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3457899999999999842111 11 1010111 1 14689999999999999999999973
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=91.22 E-value=0.38 Score=49.87 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccC--------CCCCCC---c------cc--chHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAND--------PTPPKP---F------VG--GSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~--------~~~~~~---~------~~--~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-++.|+++|+++|=|+=-+..... .....+ | ++ +..+.|+++|+.|+++||+||+|+-
T Consensus 856 ~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 856 AKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 45699999999999998422211101 000000 0 11 3689999999999999999999983
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=90.94 E-value=0.47 Score=49.35 Aligned_cols=59 Identities=20% Similarity=0.173 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccc----c---cCCCCC---CCc------cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWI----A---NDPTPP---KPF------VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~----~---~~~~~~---~~~------~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+++|=|+ +.-.. + ...... +.+ ++ +..+.|+++|+.|+++||+||||+
T Consensus 689 ~~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDv 766 (1039)
T 3klk_A 689 AQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADW 766 (1039)
T ss_dssp HHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 345899999999999984 32110 0 000000 011 11 468999999999999999999997
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=90.73 E-value=0.52 Score=48.15 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=39.8
Q ss_pred HHHHHHHHCCCCEEEcCcccccccC--------CCCCCC---c--c------cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIAND--------PTPPKP---F--V------GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~--------~~~~~~---~--~------~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
+-++.|+++|+++|=|+=-+..... .....+ | + -+..+.|+++|+.|+++||+||+|+-
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4599999999999998421111000 000000 1 1 13689999999999999999999983
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=90.25 E-value=0.38 Score=47.68 Aligned_cols=60 Identities=12% Similarity=0.103 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCEEEcCccccccc-CCCCCCCc-----c--cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAN-DPTPPKPF-----V--GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~-~~~~~~~~-----~--~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+.++.|+++|+++|=|+=.+.... ......+. + -+..+.++++|+.|+++||+||+|+-
T Consensus 18 ~~~LdyL~~LGvt~V~LsPi~e~~~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 18 RNRLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp HTTHHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCCccCCCCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4557899999999999852221110 01011111 1 24689999999999999999999974
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=89.66 E-value=0.62 Score=43.04 Aligned_cols=76 Identities=13% Similarity=0.204 Sum_probs=53.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++|++++++|++.+=|...+ .+ .+.+ +.|..+++.|.++|+++.+|+..+.+
T Consensus 106 ~~hi~~ak~aGIDgfal~w~~---~~----~~~d----~~l~~~~~aA~~~g~k~~f~~~~y~~---------------- 158 (382)
T 4acy_A 106 RKHIRMHIKANVGVLSVTWWG---ES----DYGN----QSVSLLLDEAAKVGAKVCFHIEPFNG---------------- 158 (382)
T ss_dssp HHHHHHHHHHTEEEEEEEECG---GG----GTTC----HHHHHHHHHHHHHTCEEEEEECCCTT----------------
T ss_pred HHHHHHHHHcCCCEEEEEecC---CC----CchH----HHHHHHHHHHHHcCCEEEEEeecCCC----------------
Confidence 899999999999999876532 11 1222 57888999999999999988765421
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCce
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSL 170 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v 170 (341)
...+...+-|+.+.++|+++|+.
T Consensus 159 ---~~~~~~~~dv~~li~~Y~~~paY 181 (382)
T 4acy_A 159 ---RSPQTVRENIQYIVDTYGDHPAF 181 (382)
T ss_dssp ---CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ---CChHHHHHHHHHHHHHhcCCCce
Confidence 11245566777777777765543
|
| >1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6 | Back alignment and structure |
|---|
Probab=88.28 E-value=7.6 Score=35.50 Aligned_cols=137 Identities=12% Similarity=0.089 Sum_probs=80.2
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCCC-----------CCCcc-----cc--hHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPTP-----------PKPFV-----GG--SSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~~-----------~~~~~-----~~--~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-++.|+..++|.+-+.+.- |.+.-+.. .+.|. .+ .-+.++++|+.|+++||.||..+
T Consensus 36 k~~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~rgI~VIPEI 115 (367)
T 1yht_A 36 KSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPEL 115 (367)
T ss_dssp HHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEec
Confidence 677888999999999988753 33321110 01110 01 36899999999999999999865
Q ss_pred CCCCCCCCC------------C-C--CCCCCCCccCC-chhHHHHHHHHHHHHHHHhCCC-Cce-eEEEeecCCCCCCCC
Q 019395 124 HAAPGSQNG------------N-E--HSATRDGFQEW-GDSNVADTVAVIDFLAARYANR-PSL-AAIELINEPLAPGVA 185 (341)
Q Consensus 124 h~~~g~~~~------------~-~--~~g~~~~~~~w-~~~~~~~~~~~~~~la~~y~~~-~~v-~~~el~NEP~~~~~~ 185 (341)
-. ||-... + . .+....+...- .++..+-..++++++++.|.+. +.+ +| .-|.......
T Consensus 116 D~-PGH~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~Ev~~lFp~~s~~iHiG---gDE~~~~~~~ 191 (367)
T 1yht_A 116 DS-PNHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIG---GDEFGYSVES 191 (367)
T ss_dssp EE-SSSCHHHHHHHHHHHCHHHHHHHBCSSCTTSBCTTCHHHHHHHHHHHHHHHHHHGGGCSEEEEE---CCSCCTTSCC
T ss_pred cc-hHHHHHHHHhcccccCcccccccCCCCCCceeCCCCHHHHHHHHHHHHHHHHhcCCCccEEEeC---Cccccccccc
Confidence 32 221100 0 0 00000000000 1456666778888888888752 333 22 2454332234
Q ss_pred hHHHHHHHHHHHHHHHhcCC
Q 019395 186 LDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 186 ~~~~~~~~~~~~~aIR~~~p 205 (341)
...+..|++++.+.+++.+.
T Consensus 192 ~~~~~~f~~~~~~~v~~~g~ 211 (367)
T 1yht_A 192 NHEFITYANKLSYFLEKKGL 211 (367)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHCCC
Confidence 56788999999999998754
|
| >1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2 | Back alignment and structure |
|---|
Probab=87.81 E-value=3.6 Score=38.83 Aligned_cols=120 Identities=12% Similarity=0.094 Sum_probs=75.6
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCe-EEEec-CCCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDL-HAAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~-vildl-h~~~g~~~~~~~~g~ 138 (341)
.++++.++.|+++|+|.|-|++. .+ ++.--... .....+.+.++|+.+++.|+. |-+|+ .+.||
T Consensus 150 ~l~~e~l~~L~~~G~~rislGvQ--S~-~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~GlPg---------- 216 (457)
T 1olt_A 150 EIELDVLDHLRAEGFNRLSMGVQ--DF-NKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPK---------- 216 (457)
T ss_dssp SCCTHHHHHHHHTTCCEEEEEEE--CC-CHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTT----------
T ss_pred cCCHHHHHHHHHcCCCEEEEeec--cC-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEcCCCC----------
Confidence 36899999999999987766552 11 11000000 012468888999999999998 88887 45553
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC----------CChHHHHHHHHHHHHHHHhcCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG----------VALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~----------~~~~~~~~~~~~~~~aIR~~~p 205 (341)
.+.+.+.+.++.+.+ + +-..|..+.+..+|.... .+.+...+.++.+.+.+++.+-
T Consensus 217 ---------et~e~~~~tl~~~~~-l-~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy 282 (457)
T 1olt_A 217 ---------QTPESFAFTLKRVAE-L-NPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGY 282 (457)
T ss_dssp ---------CCHHHHHHHHHHHHH-H-CCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------CCHHHHHHHHHHHHh-c-CcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCC
Confidence 234556666665554 2 234566677877776421 1345666778888888887653
|
| >1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1 | Back alignment and structure |
|---|
Probab=87.58 E-value=7.8 Score=32.84 Aligned_cols=84 Identities=18% Similarity=0.080 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
+..+.+.++.|.++||.+|+.+|.. ... +.+ ... .+.+++||..|=--.
T Consensus 100 ~~e~~~k~~~A~~~GL~~ivcVge~---------------------~e~-------~~~-~~~--~~~iIayep~waiGt 148 (226)
T 1w0m_A 100 LNDLARLVAKAKSLGLDVVVCAPDP---------------------RTS-------LAA-AAL--GPHAVAVEPPELIGT 148 (226)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSH---------------------HHH-------HHH-HHT--CCSEEEECCGGGTTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCH---------------------HHH-------HHH-hcC--CCCEEEEcChhhhcc
Confidence 4568999999999999999999963 111 111 112 345888766554322
Q ss_pred CCCChHHHH-HHHHHHHHHHHhcCCCceEEEeCCCCC
Q 019395 182 PGVALDTLK-SYYKAGYDAVRKYTSTAYVIMSNRLGP 217 (341)
Q Consensus 182 ~~~~~~~~~-~~~~~~~~aIR~~~p~~~v~~~~~~~~ 217 (341)
+.+..... +..+++.+.||...++..|+.+++-.+
T Consensus 149 -G~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~ 184 (226)
T 1w0m_A 149 -GRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIES 184 (226)
T ss_dssp -SCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred -CCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCc
Confidence 21112222 337888899999888888888865543
|
| >3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0 | Back alignment and structure |
|---|
Probab=86.54 E-value=11 Score=32.21 Aligned_cols=118 Identities=13% Similarity=0.074 Sum_probs=68.4
Q ss_pred cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeec
Q 019395 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELIN 177 (341)
Q Consensus 99 ~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~N 177 (341)
+..++.+++.|+.|++.|...|+- | +|... + .. ....+.+++.++.+++.-+...-.+++|.+|
T Consensus 89 ~~~~~~~~~~i~~A~~lGa~~v~~-~--~g~~~-----~-------~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n 153 (269)
T 3ngf_A 89 QEFRDNVDIALHYALALDCRTLHA-M--SGITE-----G-------LDRKACEETFIENFRYAADKLAPHGITVLVEPLN 153 (269)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEC-C--BCBCT-----T-------SCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEE-c--cCCCC-----C-------CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCC
Confidence 347899999999999999987763 3 22100 0 11 3566778888888888776666567788888
Q ss_pred C---CCCCCCChHHHHHHHHHHHHHHHhcC-CCceEEEeCCC---CCCChhhhhhccCCCCcEEEEeeecC
Q 019395 178 E---PLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNRL---GPADHKELLSFASGLSRVVIDVHYYN 241 (341)
Q Consensus 178 E---P~~~~~~~~~~~~~~~~~~~aIR~~~-p~~~v~~~~~~---~~~~~~~~~~~~~~~~~~v~~~H~Y~ 241 (341)
- |...-.+. .++...+++++ |+.-+.+..++ .+.++..++... ..-+.-+|.-.
T Consensus 154 ~~~~~~~~~~~~-------~~~~~l~~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~---~~~i~~vHl~D 214 (269)
T 3ngf_A 154 TRNMPGYFIVHQ-------LEAVGLVKRVNRPNVAVQLDLYHAQIMDGDLTRLIEKM---NGAFSHVQIAS 214 (269)
T ss_dssp TTTSTTBSCCCH-------HHHHHHHHHHCCTTEEEEEEHHHHHHHTCCHHHHHHHT---TTSEEEEEECC
T ss_pred cccCccchhcCH-------HHHHHHHHHhCCCCCCeEEEhhhHHhhCCCHHHHHHHh---hhhEEEEEEec
Confidence 3 32111222 23445566666 55556665321 112344444321 22355677664
|
| >1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1 | Back alignment and structure |
|---|
Probab=86.18 E-value=10 Score=32.14 Aligned_cols=81 Identities=16% Similarity=0.105 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~ 180 (341)
.+..+.+.++.|.++||.+|+.+|..- .. +.+ ... .+.+++||..|=--
T Consensus 102 ~~~e~~~k~~~A~~~GL~~ivcVge~~---------------------e~-------~~~-~~~--~~~iIayep~waiG 150 (225)
T 1hg3_A 102 ILADLEAAIRRAEEVGLMTMVCSNNPA---------------------VS-------AAV-AAL--NPDYVAVEPPELIG 150 (225)
T ss_dssp BHHHHHHHHHHHHHHTCEEEEEESSHH---------------------HH-------HHH-HTT--CCSEEEECCTTTTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCHH---------------------HH-------HHH-hcC--CCCEEEEeChhhhc
Confidence 355689999999999999999999631 11 111 111 34688876665432
Q ss_pred CC----CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 181 AP----GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 181 ~~----~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
.+ ..+. ...+++.+.||...++..|+.+++-.
T Consensus 151 tG~~v~t~~~----d~~~~~~~~ir~~~~~~~ilyggsV~ 186 (225)
T 1hg3_A 151 TGIPVSKAKP----EVITNTVELVKKVNPEVKVLCGAGIS 186 (225)
T ss_dssp TSCCTTTSCT----HHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred cCCCCCCCCh----hHHHHHHHHHHhccCCCEEEEeCCCC
Confidence 21 1222 23567788888887888888886554
|
| >2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* | Back alignment and structure |
|---|
Probab=85.40 E-value=22 Score=35.66 Aligned_cols=147 Identities=10% Similarity=0.029 Sum_probs=75.3
Q ss_pred cCHHHH----HHHHHCCCCEEEcCcccccccCC--CCCCCc--ccchHHH-HHHHHHHHHHcCCeEEEecCCC---CCCC
Q 019395 63 ITDEDF----KFLSSNGINAVRIPVGWWIANDP--TPPKPF--VGGSSKV-LDNAFDWAEKYGVKVIVDLHAA---PGSQ 130 (341)
Q Consensus 63 ~~e~d~----~~i~~~G~N~VRlpi~~~~~~~~--~~~~~~--~~~~l~~-ld~~i~~a~~~gi~vildlh~~---~g~~ 130 (341)
++|+.+ +.++++|++.|=|--+|...... ..-+.+ +++.+-. ++.+++.+++.||++.|-+.-. +.+.
T Consensus 343 ~~e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~GlW~~P~~v~~~S~ 422 (720)
T 2yfo_A 343 FTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINEDSD 422 (720)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEEEEEECTTEECSSSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEEEEEecccccCCCCH
Confidence 455544 55678999998887677422111 011122 2223333 8899999999999988865421 1110
Q ss_pred ----CC---CCCCC-CCC-C----ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC-CCC--hHHHHHHH
Q 019395 131 ----NG---NEHSA-TRD-G----FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP-GVA--LDTLKSYY 193 (341)
Q Consensus 131 ----~~---~~~~g-~~~-~----~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~-~~~--~~~~~~~~ 193 (341)
.. ....+ ... + ..... ++.++.+.+.++.+.+.+ +-..+- ||- |.+... ..+ .......+
T Consensus 423 l~~~hpdw~~~~~~~~~~~~~~~~~LD~t~Pea~~~~~~~l~~l~~~~-GIDy~K-~D~-n~~~~~~~~~~~~~~y~~~~ 499 (720)
T 2yfo_A 423 LYRAHPDWAIRIQGKKPVRSRNQLLLDFSRKEVRDCVFDQICVVLDQG-KIDYVK-WDM-NRSMADVYAGNLSYDYVLGV 499 (720)
T ss_dssp HHHHCGGGBCCCTTSCCCCBTTBEEBCTTSHHHHHHHHHHHHHHHTTS-CCCEEE-ECC-CSCCCSCCSTTHHHHHHHHH
T ss_pred HHHhCcceEEECCCcCcccCCceEEECCCCHHHHHHHHHHHHHHHHHc-CCCEEE-ECC-CCCccccCCccHHHHHHHHH
Confidence 00 00000 000 0 01122 566666667776666555 333343 553 432211 111 12233334
Q ss_pred HHHHHHHHhcCCCceEEEe
Q 019395 194 KAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 194 ~~~~~aIR~~~p~~~v~~~ 212 (341)
.++.++||+..|+..+...
T Consensus 500 y~l~~~l~~~~p~v~~e~C 518 (720)
T 2yfo_A 500 YDFMERLCSRYPDLLLEGC 518 (720)
T ss_dssp HHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHHHhCCCcEEEec
Confidence 5678889999998655543
|
| >2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=85.21 E-value=3.5 Score=41.50 Aligned_cols=60 Identities=10% Similarity=0.095 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-++.|+..++|.+-+++.-.......-.++|.....+.+.++++.|+++||.||..+|
T Consensus 169 ~~~id~ma~~K~N~~h~hl~Dd~~~~~~wr~~y~~~~~~~~~elv~ya~~rgI~vv~~i~ 228 (737)
T 2v5d_A 169 LDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGIS 228 (737)
T ss_dssp HHHHHHHHHTTCCEEECCCSCCSTTTTTC-----CTTHHHHHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHhCCeEEEEecccccchhhccCcCCCHHHHHHHHHHHHHHHHCCCEEEEecC
Confidence 677888899999998876532111100111234444477999999999999999997775
|
| >2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=85.18 E-value=1.6 Score=40.00 Aligned_cols=51 Identities=16% Similarity=0.113 Sum_probs=38.3
Q ss_pred HHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
+.++.+++.||..|=.++. .|.. -.+...+.+++++++|+++||.||+|+.
T Consensus 21 ~yi~~a~~~Gf~~IFTSL~-----~~e~---~~~~~~~~~~~l~~~a~~~g~~vi~DIs 71 (372)
T 2p0o_A 21 IYIKKMKALGFDGIFTSLH-----IPED---DTSLYRQRLTDLGAIAKAEKMKIMVDIS 71 (372)
T ss_dssp HHHHHHHHTTCCEEEEEEC-----CC--------CHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHCCCCEEEccCC-----ccCC---ChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 5688888999998866553 1211 1245789999999999999999999975
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=84.81 E-value=2.7 Score=38.69 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=52.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchH-HHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS-KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l-~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
+++|+++++.|++.+=+...+ + +.. .- ..|..+++.|.++|+++.++++.+.+
T Consensus 107 ~~h~~~Ak~aGIDgf~l~w~~-----~---~~~---~d~~~l~~~l~aA~~~~~k~~f~~~~~~~--------------- 160 (380)
T 4ad1_A 107 TKHMDMFVMARTGVLALTWWN-----E---QDE---TEAKRIGLILDAADKKKIKVCFHLEPYPS--------------- 160 (380)
T ss_dssp HHHHHHHHHHTEEEEEEEECC-----C---CSH---HHHHHHHHHHHHHHHTTCEEEEEECCCTT---------------
T ss_pred HHHHHHHHHcCCCEEEEEecC-----C---CCc---ccHHHHHHHHHHHHHcCCeEEEEECCCCC---------------
Confidence 899999999999999875321 1 111 12 56788899999999999988875421
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCce
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSL 170 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v 170 (341)
...+...+-++.|.++|.++|+.
T Consensus 161 ----~~~~~~~~di~~li~~Y~~~pay 183 (380)
T 4ad1_A 161 ----RNVQNLRENIVKLITRYGNHPAF 183 (380)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ----CChHHHHHHHHHHHHHhcCCCce
Confidence 11244556677777777765543
|
| >3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural genomics, joint center for structural genomics, JCSG; 1.55A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.03 E-value=15 Score=34.59 Aligned_cols=97 Identities=12% Similarity=0.127 Sum_probs=61.4
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecC-C
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE-P 179 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE-P 179 (341)
.|+.-++.|+.++++|++|+|.+-+..++ .++ ....+...+.|++-++.+.++| .+-|+||-=| |
T Consensus 226 ~L~~~~~~v~~lq~~glKVllSIgGg~~~-~gf---------~~ls~~~r~~Fa~~v~~~v~~y----glDGIDiDwEYp 291 (451)
T 3poh_A 226 LLDNNETLLQPLRRRGVKVLLGLLGNHDI-TGL---------AQLSEQGAKDFAREVAQYCKAY----NLDGVNYDDEYS 291 (451)
T ss_dssp HHHTHHHHTHHHHHTTCEEEEEEECCSSS-CCT---------TCBCHHHHHHHHHHHHHHHHHT----TCCEEEEECCSC
T ss_pred hhhChHHHHHHHHHCCCEEEEEECcCCCC-CCc---------ccCCHHHHHHHHHHHHHHHHHh----CCCcEEEeccCC
Confidence 45555889999999999999988542111 111 1113567788999999999999 4455666555 3
Q ss_pred CCCC-----CChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 180 LAPG-----VALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 180 ~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
..++ ....+ ..-+..+++++|+.-|+.+|.+-
T Consensus 292 ~~~~~g~~~~~~~d-~~nf~~Ll~eLR~~lp~kllT~A 328 (451)
T 3poh_A 292 NSPDLSNPSLTNPS-TAAAARLCYETKQAMPDKLVTVF 328 (451)
T ss_dssp CCCCTTSTTBCSCC-HHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCCCCCCcCCCC-HHHHHHHHHHHHHhCCCCEEEEE
Confidence 3211 11112 23445667788888888777765
|
| >2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A* | Back alignment and structure |
|---|
Probab=83.47 E-value=19 Score=33.89 Aligned_cols=134 Identities=11% Similarity=-0.013 Sum_probs=75.0
Q ss_pred CHHHHHHHHHCCCCEEEcCcc----cccccCCCCCCCcc----cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCC-CC
Q 019395 64 TDEDFKFLSSNGINAVRIPVG----WWIANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNG-NE 134 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~----~~~~~~~~~~~~~~----~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~-~~ 134 (341)
.++-.+.+|++|++.|=|--. +-.+ |+....++ ...-+.|.++++.|+++||++-+-+++...-.+. ..
T Consensus 107 p~~Wa~~~k~AGakyvvlTaKHHDGF~lw--pSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~GlY~S~~~dW~~p~~~ 184 (455)
T 2zxd_A 107 PQEWADLFKKAGAKYVIPTTKHHDGFCLW--GTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTTEP 184 (455)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSS--CCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEEEEEECSCCGGGCCSC
T ss_pred HHHHHHHHHHhCCCEEEEEeeccCCcccc--CCCCCCCcccccCCCCChHHHHHHHHHHcCCeEEEEecCCccccCcccc
Confidence 367778889999999988431 1111 11111221 1134889999999999999999988832211111 00
Q ss_pred CCCCCC--CccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceE
Q 019395 135 HSATRD--GFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 135 ~~g~~~--~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
...... ....-.+.+.+.+..-+++|.++|+ |.++=+|-.- |. ...+ -..++++.+|+..|+.+|
T Consensus 185 ~~~~~~~y~~~~~~~~y~~~~~~Ql~ELlt~Y~--pd~lWfDg~~-~~-----~~~w--~~~~~~~~~~~~~P~~vv 251 (455)
T 2zxd_A 185 IRYPEDLSYIRPNTYEYADYAYKQVMELVDLYL--PDVLWNDMGW-PE-----KGKE--DLKYLFAYYYNKHPEGSV 251 (455)
T ss_dssp CCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHC--CSEEEEESCC-CG-----GGTT--HHHHHHHHHHHHCTTCCB
T ss_pred cccccccccCCCccHHHHHHHHHHHHHHHhhcC--CcEEEECCCC-Cc-----cchh--hHHHHHHHHHHhCCCEEE
Confidence 000000 0000014667778888899999996 3344367321 22 1101 134566678888886544
|
| >1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=83.18 E-value=6.2 Score=35.09 Aligned_cols=126 Identities=11% Similarity=0.065 Sum_probs=74.0
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
+.++++...+.|+..||+.++-+.......-..-.++.++.+.++|+.|+++|+.|...+-..-+.. ..+
T Consensus 83 ~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~----~~~------ 152 (307)
T 1ydo_A 83 NQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCP----YEK------ 152 (307)
T ss_dssp SHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBT----TTB------
T ss_pred CHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCC----cCC------
Confidence 5789999999999999997753322111111111255789999999999999999987765432111 001
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+...+.+.++.+.+.+.=.+ .| . |-.= .+ ...+.+.. ++++++|+.-|+.+|-++.
T Consensus 153 ---~~~~~~~~~~~~~~~~~Ga~--~i-~--l~DT-~G-~~~P~~v~----~lv~~l~~~~~~~~l~~H~ 208 (307)
T 1ydo_A 153 ---DVPIEQVIRLSEALFEFGIS--EL-S--LGDT-IG-AANPAQVE----TVLEALLARFPANQIALHF 208 (307)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCS--CE-E--EECS-SC-CCCHHHHH----HHHHHHHTTSCGGGEEEEC
T ss_pred ---CCCHHHHHHHHHHHHhcCCC--EE-E--EcCC-CC-CcCHHHHH----HHHHHHHHhCCCCeEEEEE
Confidence 13456677777777653211 22 1 2211 11 23344443 4566677766777787774
|
| >4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens} | Back alignment and structure |
|---|
Probab=82.06 E-value=27 Score=31.01 Aligned_cols=94 Identities=14% Similarity=0.077 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecC-CC
Q 019395 102 SKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE-PL 180 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE-P~ 180 (341)
-..+.+-|..|++.|++|+|.+=+..+.. .......+.|++-+..+.++| .+-|+||-=| |.
T Consensus 82 ~~~~~~~i~~~~~~g~kvllSiGG~~~~~-------------~~~~~~r~~F~~s~~~~l~~y----gfDGiDiDwE~p~ 144 (328)
T 4axn_A 82 DTEFRRQVGVLNSQGRAVLISLGGADAHI-------------ELKTGDEDKLKDEIIRLVEVY----GFDGLDIDLEQAA 144 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEETTCCC-------------CCCTTCHHHHHHHHHHHHHHH----CCCEEEEEECTTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCCCc-------------cCChHHHHHHHHHHHHHHHHh----CCCeEEEecccCC
Confidence 46677889999999999999986543211 011245677888888888888 4667777767 32
Q ss_pred CC-CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 181 AP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 181 ~~-~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
.. ......+..+.+++.+..++.+++.+|.+.
T Consensus 145 ~~~~~~~~~~~~~l~~l~~~~~~~g~~~~lt~A 177 (328)
T 4axn_A 145 IGAANNKTVLPAALKKVKDHYAAQGKNFIISMA 177 (328)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHTTTCCCEEEEC
T ss_pred CCCcchHHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 21 122345566666666666666676666654
|
| >2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A* | Back alignment and structure |
|---|
Probab=81.80 E-value=4.4 Score=39.62 Aligned_cols=60 Identities=10% Similarity=0.095 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-++.|+..++|.+-+.+.-.......-.++|.....+.+.++++.|+++||.||..+|
T Consensus 169 k~~id~ma~~KlN~~h~Hl~DDq~~~~~wr~~Yp~~~~~~i~elv~yA~~rgI~vv~~i~ 228 (594)
T 2v5c_A 169 LDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAENKVDFVFGIS 228 (594)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCGGGTTTTTSCCCGGGHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHhCCcEEEEecccCcccccccCCCCCHHHHHHHHHHHHHHHHCCcEEEEecC
Confidence 677788899999998876632110001111245444577999999999999999998876
|
| >1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12 | Back alignment and structure |
|---|
Probab=81.64 E-value=1.7 Score=40.04 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=35.7
Q ss_pred HHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 66 EDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
+.++.+++.||..|=.++. .+. .-.+...+++++++++|+++||.||+|+-.
T Consensus 45 ~Yi~~a~~~Gf~~IFTSL~-----~~e---~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp 96 (385)
T 1x7f_A 45 AYISAAARHGFSRIFTCLL-----SVN---RPKEEIVAEFKEIINHAKDNNMEVILDVAP 96 (385)
T ss_dssp HHHHHHHTTTEEEEEEEEC-----CC-----------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHCCCCEEEccCC-----ccC---CChHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 5677788889987755542 121 112456899999999999999999999863
|
| >1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 | Back alignment and structure |
|---|
Probab=81.17 E-value=8.4 Score=34.81 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=65.3
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
++++++..++.|++.|||+++- .. .+.+.++++.|+++|+.|+..+-..+.
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~---------s~-----~~~~~~~i~~ak~~G~~v~~~~~~a~~--------------- 145 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHC---------TE-----ADVSKQHIEYARNLGMDTVGFLMMSHM--------------- 145 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEET---------TC-----GGGGHHHHHHHHHHTCEEEEEEESTTS---------------
T ss_pred cHHHHHHHHhCCcCEEEEEEec---------cH-----HHHHHHHHHHHHHCCCEEEEEEEeCCC---------------
Confidence 5899999999999999997532 11 134678899999999999998743320
Q ss_pred CCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-CChHHHHHHHHHHHHHHHhcCC-CceEEEeC
Q 019395 144 EWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTS-TAYVIMSN 213 (341)
Q Consensus 144 ~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p-~~~v~~~~ 213 (341)
...+++.++.+.+.+ ++ ...+ +=+...+ ..+.. +.++++++|+.-| +.+|-++.
T Consensus 146 ----~~~e~~~~ia~~~~~-~G--a~~i-----~l~DT~G~~~P~~----v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 146 ----IPAEKLAEQGKLMES-YG--ATCI-----YMADSGGAMSMND----IRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp ----SCHHHHHHHHHHHHH-HT--CSEE-----EEECTTCCCCHHH----HHHHHHHHHHHSCTTSEEEEEC
T ss_pred ----CCHHHHHHHHHHHHH-CC--CCEE-----EECCCcCccCHHH----HHHHHHHHHHhcCCCceEEEEE
Confidence 224566666666554 31 1122 2122111 22333 4455666777664 78888874
|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
Probab=80.16 E-value=41 Score=33.60 Aligned_cols=60 Identities=17% Similarity=0.134 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccC-CCCCCCcccchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAND-PTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~-~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+.++.|+..++|.+-+.+.-..... ..-..+|-....+.+.++++.|+++||.||..+|
T Consensus 147 k~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr~~yP~lt~~ei~elv~yA~~rgI~vvpeI~ 207 (716)
T 2cho_A 147 LSQLKFYGKNKMNTYIYGPKDDPYHSAPNWRLPYPDKEAAQLQELVAVANENEVDFVWAIH 207 (716)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCcEEEEeeccCcccccccccccCChhhHHHHHHHHHHHHHcCCEEEEeec
Confidence 67778899999999887663110000 0000123222567899999999999999999996
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 341 | ||||
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 1e-64 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 9e-61 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 2e-32 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 3e-24 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 1e-23 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 1e-22 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 4e-21 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 4e-18 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 1e-16 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 2e-13 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 4e-13 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 5e-12 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 2e-11 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 2e-10 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 4e-10 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 8e-10 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 1e-09 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 2e-09 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 2e-07 | |
| d1foba_ | 334 | c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi | 4e-07 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 5e-06 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 6e-04 |
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 208 bits (529), Expect = 1e-64
Identities = 91/342 (26%), Positives = 148/342 (43%), Gaps = 43/342 (12%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY G D A LQ HW ++ ++DF ++S G N VRIP+G+W
Sbjct: 50 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVS 109
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G LD A WA +KV VDLH A GSQNG ++S RD ++ DSN+A T+ V++
Sbjct: 110 GLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLN 169
Query: 159 FLAARYAN---RPSLAAIELINEPLAPGVALDT-LKSYYKAGYDAVRKY-TSTAYVIMSN 213
++ +Y+ + IELINEPL P + +D Y Y+ +R S +I+ +
Sbjct: 170 YILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHD 229
Query: 214 RLGPAD-HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN----------- 261
P + + ++ G V ID H+Y +F+++ ++ ++I
Sbjct: 230 AFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHIKVACEWGTGVLNESHW 289
Query: 262 ----QRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS--------------------KQDY 297
+ A+ L + F + W D + K++
Sbjct: 290 IVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYWSDERKENT 349
Query: 298 QRFANAQLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 338
+R+ AQLD + GW W +K E + W + ++ NG
Sbjct: 350 RRYVEAQLDAF-EMRGGWIIWCYKTESSLEWDAQRLMFNGLF 390
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 197 bits (502), Expect = 9e-61
Identities = 100/336 (29%), Positives = 157/336 (46%), Gaps = 38/336 (11%)
Query: 39 EYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV 98
EY T G + A ++LQ HW ++IT++DFK +S+ G+N VRIP+G+W A P+V
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVID 158
G + L+ A WA K ++V +DLH APGSQNG ++S RD + N T+ V++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 159 FLAARYANRPS---LAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215
+ +Y + IEL+NEPL P + +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 216 GPADH-KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGA----- 269
+ L+ A G VV+D H+Y +FS N+ +I N
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 283
Query: 270 -----------------------VTTSNGPLTFVGEWTCEWNVK---DASKQDYQRFANA 303
+ ++G ++ D K D +R+ A
Sbjct: 284 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEA 343
Query: 304 QLDVYGRATFGWAYWAHKCE-ANHWSLKWMIENGYI 338
QLD + T GW +W+ K E A WS + + NG
Sbjct: 344 QLDAF-EYTGGWVFWSWKTENAPEWSFQTLTYNGLF 378
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 121 bits (303), Expect = 2e-32
Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 47/311 (15%)
Query: 49 DKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNA 108
+ ++H+D++IT++D + ++ G + VR+P + I + +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 109 FDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRP 168
+W +KY + +++D+H APG + + ++T + V + FLA RY N
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTST----LFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 169 SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFAS 228
A EL+N+ + P A+R+ ST ++ + + +
Sbjct: 131 EHIAFELLNQVVEPDS--TRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 229 GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVN---------------------------- 260
+V + H+YN F + ++ N
Sbjct: 189 DDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL 248
Query: 261 ----------NQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGR 310
+ + GE+ + A + ++ + +
Sbjct: 249 NNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGV---IAIADLESRIKWHEDYISLLEE 305
Query: 311 ATFGWAYWAHK 321
G A W +K
Sbjct: 306 YDIGGAVWNYK 316
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 98.7 bits (245), Expect = 3e-24
Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 31/282 (10%)
Query: 46 FGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVL 105
FG P V + + L S G+N R+P + L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 106 DNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYA 165
+ + G +VD H + S+ +D +A+++A
Sbjct: 75 IATVNAITQKGAYAVVDPH-------------NYGRYYNSIISSPSDFETFWKTVASQFA 121
Query: 166 NRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM-------SNRLGPA 218
+ P + + NE + + +A D +R +T+ I
Sbjct: 122 SNPLV-IFDTDNEYHDMDQ--TLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 219 DHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 278
+ + S +++ ++H Y + +G + + +R + +NG
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDS--DGSGTSATCVSSTIGQERITSATQWLRANGKKG 236
Query: 279 FVGEW-TCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWA 319
+GE+ NV + + + DV+ G +WA
Sbjct: 237 IIGEFAGGADNVCETAITGMLDYMAQNTDVW----TGAIWWA 274
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 98.1 bits (243), Expect = 1e-23
Identities = 45/311 (14%), Positives = 89/311 (28%), Gaps = 46/311 (14%)
Query: 60 DSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKV 119
T + + G N VRIPV W + ++ + V
Sbjct: 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWMNRVQEVVNYCIDNKMYV 117
Query: 120 IVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 179
I++ H G S+ ++ S+ +V +AAR+AN E +NEP
Sbjct: 118 ILNTHHDVDKVKGYFPSS------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEP 171
Query: 180 LAPG---------------VALDTLKSYYKAGYDAVRKY---------TSTAYVIMSNRL 215
G +++ + + + VR YV +
Sbjct: 172 RLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGA 231
Query: 216 GPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNN---------QRASD 266
+ + +++++ VH Y ++ + + N +
Sbjct: 232 TNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDN 291
Query: 267 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-- 324
+ TS G +GE ++ +Y + AQ G W
Sbjct: 292 IYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARGILCILWDNNNFSGTGEL 351
Query: 325 ----NHWSLKW 331
+ S ++
Sbjct: 352 FGFFDRRSCQF 362
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 94.0 bits (232), Expect = 1e-22
Identities = 47/288 (16%), Positives = 86/288 (29%), Gaps = 28/288 (9%)
Query: 54 VLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAE 113
+EDF +++ N VRIP+ + +D P + +D W E
Sbjct: 12 AFSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGE 71
Query: 114 KYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAI 173
KYG+ + + LH APG E + + + + A + +
Sbjct: 72 KYGIHICISLHRAPGYSVNKEVEEKTNLW-KDETAQEAFIHHWSFIARRYKGISSTHLSF 130
Query: 174 ELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGL 230
LINEP P ++++ S K +RK +I+ + + +
Sbjct: 131 NLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIII----DGLGYGNIPVDDLTI 186
Query: 231 SRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVT-----------------TS 273
V Y FS + D+ + +
Sbjct: 187 ENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQ 246
Query: 274 NGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321
G F GE ++ L+++ G+A W +
Sbjct: 247 KGIEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFR 291
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 90.5 bits (223), Expect = 4e-21
Identities = 48/309 (15%), Positives = 92/309 (29%), Gaps = 38/309 (12%)
Query: 43 TNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS 102
N FG + V+ W + S G N +R+P I T P
Sbjct: 26 INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 103 ----------KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD 152
+V+D +A + G+++I+D H S + A
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQ--------SALWYTSSVSEAT 136
Query: 153 TVAVIDFLAARYANRPSLAAIELINEPLAP-----GVALDTLKSYYKAGYDAVRKYTSTA 207
++ + LA RY P++ +L NEP P G + + +AV
Sbjct: 137 WISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196
Query: 208 YVIMSNRLGPADH-----------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNI 256
+ + + + +R+V H Y +
Sbjct: 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256
Query: 257 DYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS--KQDYQRFANAQLDVYGRATFG 314
+ + + G + N ++GE+ + ++ YG +F
Sbjct: 257 NNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQ-YGADSFQ 315
Query: 315 WAYWAHKCE 323
W +W+ +
Sbjct: 316 WTFWSWNPD 324
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 82.2 bits (202), Expect = 4e-18
Identities = 42/255 (16%), Positives = 74/255 (29%), Gaps = 13/255 (5%)
Query: 58 HWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
+ +S + FK L G+N VR+ + + + A G+
Sbjct: 34 YNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGM 93
Query: 118 KVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELI 176
K++ D H + + + A + + L A A + +++
Sbjct: 94 KLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVG 153
Query: 177 NEP---LAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRV 233
NE LA + + AG AVR+ S V + P A L R
Sbjct: 154 NETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFT-NPETSGRYAWIAETLHRH 212
Query: 234 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS 293
+D + + S L +V + G V E + + +D
Sbjct: 213 HVDYDVF--------ASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGD 264
Query: 294 KQDYQRFANAQLDVY 308
N Q
Sbjct: 265 GHGNTAPKNGQTLNN 279
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 78.0 bits (191), Expect = 1e-16
Identities = 40/265 (15%), Positives = 89/265 (33%), Gaps = 14/265 (5%)
Query: 59 WDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGV 117
+ + + F LS++ G N +R+ + T P+ ++ + A ++ +
Sbjct: 48 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-----DLVYEGIELAFEHDM 102
Query: 118 KVIVDLH-AAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 176
VIVD H APG + +S D F+E ++ ++ AN PS
Sbjct: 103 YVIVDWHVHAPGDPRADVYSGAYDFFEEI--ADHYKDHPKNHYIIWELANEPSPNNNGGP 160
Query: 177 NEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVID 236
+ +K Y + + +R+ ++ + + ++
Sbjct: 161 GLT-NDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADNPIDA-ENIMYS 218
Query: 237 VHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296
VH+Y + + + +++ + + F EW + +
Sbjct: 219 VHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEWG--TSQANGDGGP 275
Query: 297 YQRFANAQLDVYGRATFGWAYWAHK 321
Y A+ L+ + WA W+
Sbjct: 276 YFDEADVWLNFLNKHNISWANWSLT 300
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 67.9 bits (165), Expect = 2e-13
Identities = 44/274 (16%), Positives = 82/274 (29%), Gaps = 41/274 (14%)
Query: 58 HWDSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+ ++ E K+L + GIN R + P + + A + A
Sbjct: 36 WYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSVK-----EKVKEAVEAAIDLD 90
Query: 117 VKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELI 176
+ VI+D H + + D ++ Y + P++ E+
Sbjct: 91 IYVIIDWHILSD---------------NDPNIYKEEAKDFFDEMSELYGDYPNV-IYEIA 134
Query: 177 NEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVI 235
NEP V + +K Y + +R +I+ D V+
Sbjct: 135 NEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMY 194
Query: 236 DVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQ 295
H+Y +G N++ +DY + G FV EW +
Sbjct: 195 AFHFY----AGTHGQNLRDQVDYALD------------QGAAIFVSEWG--TSAATGDGG 236
Query: 296 DYQRFANAQLDVYGRATFGWAYWAHKCEANHWSL 329
+ A +D WA W+ + +
Sbjct: 237 VFLDEAQVWIDFMDERNLSWANWSLTHKDESSAA 270
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 67.0 bits (162), Expect = 4e-13
Identities = 34/329 (10%), Positives = 86/329 (26%), Gaps = 41/329 (12%)
Query: 36 LRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTP-- 93
L G Q + D Q + + S+G N+VR+ + + P
Sbjct: 18 LSGANQAWVNYARDFGH--NQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDN 75
Query: 94 ---PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNV 150
+ A+++ + + L Q+ + S +
Sbjct: 76 NGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYI 135
Query: 151 ADTVAVIDFLAARYANRPSLAAIELINE---------------------------PLAPG 183
+ +A N +L +++NE
Sbjct: 136 DHALK---PMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHL 192
Query: 184 VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLF 243
+ + + A+++ A V + + AD + ++
Sbjct: 193 YSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSG 252
Query: 244 SNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANA 303
+ +F ++ ++ N+ +GE+ E +S+ ++
Sbjct: 253 TLSFYQVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAYT- 311
Query: 304 QLDVYGRATFGWAYWAHKCEANHWSLKWM 332
Y A + W+ ++ +
Sbjct: 312 --KGYSGA-WTWSRTDVSWNNQLRGMQHL 337
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 63.3 bits (153), Expect = 5e-12
Identities = 41/275 (14%), Positives = 84/275 (30%), Gaps = 46/275 (16%)
Query: 60 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
+ + T + L + + VR +G + G+ ++ D A +
Sbjct: 36 EKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIANDMY 92
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
I+ H ++N ++ + +A +Y N+P+ E+ NE
Sbjct: 93 AIIGWH------------------SHSAENNRSEAIRFFQEMARKYGNKPN-VIYEIYNE 133
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 238
PL +T+K Y +A A+R +I+ + E + +H
Sbjct: 134 PLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLH 192
Query: 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD-- 296
+Y +G +++ N + + EW +A
Sbjct: 193 FYA----GTHGESLRNKARQALNNG----------------IALFVTEWGTVNADGNGGV 232
Query: 297 YQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 331
Q +A + A WA + S +
Sbjct: 233 NQTETDAWVTFMRDNNISNANWALNDKNEGASTYY 267
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 61.5 bits (148), Expect = 2e-11
Identities = 39/288 (13%), Positives = 76/288 (26%), Gaps = 51/288 (17%)
Query: 55 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 114
W + +++ G N VRI + + + + N AE
Sbjct: 25 HGHAWYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAED 76
Query: 115 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 174
+ ++++H A G + + D + E + + I
Sbjct: 77 NNLVAVLEVHDATGYDSIASLNRAVDYWIEM---------------RSALIGKEDTVIIN 121
Query: 175 LINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM------SNRLGPADHKELLSFAS 228
+ NE YK +R +++ D+ + A
Sbjct: 122 IANEWFGSWDG-AAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNAD 180
Query: 229 GLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288
+ +H Y N + V+ NID V N +GE+
Sbjct: 181 PQRNTMFSIHMYEYAGGNAS--QVRTNIDRVLN------------QDLALVIGEFGHRHT 226
Query: 289 VKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 336
D + + + GW W+ K W + +
Sbjct: 227 NGDVDESTI-------MSYSEQRGVGWLAWSWKGNGPEWEYLDLSNDW 267
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 58.7 bits (141), Expect = 2e-10
Identities = 37/290 (12%), Positives = 76/290 (26%), Gaps = 51/290 (17%)
Query: 55 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEK 114
+W T F + S+G N VR+ + + P + N ++
Sbjct: 26 HPHNWYPQHTQ-AFADIKSHGANTVRVVLSNGVRWSKNGPSD--------VANVISLCKQ 76
Query: 115 YGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIE 174
+ ++++H G + S W L + I
Sbjct: 77 NRLICMLEVHDTTGYGEQSGASTLDQAVDYW------------IELKSVLQGEEDYVLIN 124
Query: 175 LINEPLAP-GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLS-------F 226
+ NEP + + A +R +++ D +
Sbjct: 125 IGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYA 184
Query: 227 ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286
+ V +H Y ++S + +++ N PL +GE+
Sbjct: 185 SDPTGNTVFSIHMYGVYSQAS---TITSYLEHFVNA-----------GLPL-IIGEF--- 226
Query: 287 WNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMIENG 336
D + + R G+ W+ M+ N
Sbjct: 227 ----GHDHSDGNPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYNF 272
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 57.7 bits (138), Expect = 4e-10
Identities = 51/292 (17%), Positives = 95/292 (32%), Gaps = 43/292 (14%)
Query: 58 HWDSYIT-----DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS---------- 102
+W S++T D F +SS+G+ VR+ + P+P + + S
Sbjct: 27 YWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGA 86
Query: 103 ---KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSN----VADTVA 155
+ LD AE++ +K+I+ G G
Sbjct: 87 DGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRK 146
Query: 156 VIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIM---- 211
+ + +RYAN ++ A EL NEP G + D + + + V+ S V +
Sbjct: 147 YVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEG 206
Query: 212 -----SNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 266
+ P + E FA + +D ++L+ +++ N + N +
Sbjct: 207 LGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT-----NYTWGNGWIQTH 261
Query: 267 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYW 318
A + P E+ + N R G +W
Sbjct: 262 AAACLAAGKPC-VFEEYGAQQNPCTNEAPWQTTSLTT------RGMGGDMFW 306
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 56.8 bits (136), Expect = 8e-10
Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 44/263 (16%)
Query: 60 DSYITDEDFKFLSSN-GINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK 118
+ + T E + +R +G + G+ LD + A +
Sbjct: 36 EKFYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMY 94
Query: 119 VIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE 178
VI+D H+ ++ A V + +A +Y ++ E+ NE
Sbjct: 95 VIIDFHSHE------------------AHTDQATAVRFFEDVATKYGQYDNV-IYEIYNE 135
Query: 179 PLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVH 238
PL ++ +K Y + D +R +++ D + + +H
Sbjct: 136 PLQIS-WVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLH 194
Query: 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 298
+Y Q +D + EW +A
Sbjct: 195 FYAGTHGQSYRNKAQTALDNGIAL--------------------FATEWGTVNADGNGGV 234
Query: 299 R--FANAQLDVYGRATFGWAYWA 319
+A + + A WA
Sbjct: 235 NINETDAWMAFFKTNNISHANWA 257
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 56.6 bits (135), Expect = 1e-09
Identities = 43/299 (14%), Positives = 82/299 (27%), Gaps = 36/299 (12%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--KVLDNAFDWAEK 114
D F+ S +N R + P P V + LD A+K
Sbjct: 34 DPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKK 93
Query: 115 YGVKVIVDLHAAPGSQNG----NEHSATRDGFQEWGDSNVADTVAVIDFLA--------- 161
YG+ +I+ L + G E + R D + + +
Sbjct: 94 YGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRV 153
Query: 162 -----ARYANRPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVI----- 210
Y + P++ + ELINEP P + T +++ ++ S +
Sbjct: 154 NTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEG 213
Query: 211 ----MSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASD 266
+ P + +F S ID +++ N + Q+ D +Q
Sbjct: 214 FYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQV 273
Query: 267 LGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRA------TFGWAYWA 319
+ + E+ + + G +W
Sbjct: 274 HIDDSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQ 332
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 55.8 bits (133), Expect = 2e-09
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 19/172 (11%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYG 116
+HW ED + + G++ VRI W +P P + G LD A G
Sbjct: 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGW----LDEAIATLAAEG 64
Query: 117 VKVIVDLHAAPGSQ--------------NGNEHSATRDGFQEWGDSNVAD-TVAVIDFLA 161
+KV++ A + G + + ++ LA
Sbjct: 65 LKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLA 124
Query: 162 ARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213
RY ++A + NE +A + T +
Sbjct: 125 ERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEA 176
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 49.8 bits (117), Expect = 2e-07
Identities = 34/307 (11%), Positives = 83/307 (27%), Gaps = 44/307 (14%)
Query: 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSS--------KVLDNA 108
+ D ++ L + G+N +R+ + + KP V + LD
Sbjct: 36 EVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYL 95
Query: 109 FDWAEKYGVKVIVDLHAAPGSQNG-NEHSATRDGFQEWGDSNVADTVAVIDFLAARY--- 164
K + V++ + G ++ A +G + + A + A+ Y
Sbjct: 96 LVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSE 155
Query: 165 -------------------------ANRPSLAAIELINEPLAP-----GVALDTLKSYYK 194
+ ++ + +L NEP +
Sbjct: 156 KAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIYIDWVH 215
Query: 195 AGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ 254
A ++ + V + ++ F + ID Y+++ N++ + +
Sbjct: 216 AAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTK 275
Query: 255 NIDYVNNQRASDLGAVTTSNGPLTFVGE--WTCEWNVKDASKQDYQRFANAQLDVYGRAT 312
+ + + + + E+ + D Y R
Sbjct: 276 PAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGV 335
Query: 313 FGWAYWA 319
F +
Sbjct: 336 FELMLAS 342
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Score = 48.5 bits (115), Expect = 4e-07
Identities = 29/269 (10%), Positives = 71/269 (26%), Gaps = 33/269 (12%)
Query: 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 123
T L+ GIN++R V +P+ + G+ + +DL
Sbjct: 29 TQALETILADAGINSIRQRV----WVNPSDGS----YDLDYNLELAKRVKAAGMSLYLDL 80
Query: 124 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVA-VIDFLAARYANRPSLAAIELINEPLAP 182
H + + ++ + T G+ + + + +A I I +
Sbjct: 81 HLSDTWADPSDQT-TPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRA 139
Query: 183 GVAL--------DTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSF-------A 227
G+ + + +G V+ + L + ++
Sbjct: 140 GLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLAT 199
Query: 228 SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEW 287
L D + + + + N + ++ V E
Sbjct: 200 GELLSTDFDYFGVSYYPFYSASATLASLKTSLAN--------LQSTYDKPVVVVETNWPV 251
Query: 288 NVKDASKQDYQRFANAQLDVYGRATFGWA 316
+ + + ++ V G+ F
Sbjct: 252 SCPNPAYAFPSDLSSIPFSVAGQQEFLEK 280
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Score = 45.3 bits (106), Expect = 5e-06
Identities = 29/260 (11%), Positives = 67/260 (25%), Gaps = 22/260 (8%)
Query: 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDL 123
L++NG+N VR V +P + A+ G+ V +D
Sbjct: 29 AQPLENILAANGVNTVRQRV----WVNPADGN----YNLDYNIAIAKRAKAAGLGVYIDF 80
Query: 124 HAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINE----- 178
H + + + + + + +D + + NE
Sbjct: 81 HYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGL 140
Query: 179 --PLAPGVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLGPADHKELLSFASGL--SRV 233
P + + ++ S IM + D + + +
Sbjct: 141 LWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGT 200
Query: 234 VIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDAS 293
+ + + + + + + + S L + + V E + +
Sbjct: 201 LELSDFDMMGVSFYPFYSSSATL----SALKSSLDNMAKTWNKEIAVVETNWPISCPNPR 256
Query: 294 KQDYQRFANAQLDVYGRATF 313
N G+ TF
Sbjct: 257 YSFPSDVKNIPFSPEGQTTF 276
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 38.8 bits (89), Expect = 6e-04
Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 27/169 (15%)
Query: 45 GFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKV 104
G+ PD + + + K++ + G+N VR +P
Sbjct: 27 GYTPDLFLRWNETAAA-----DKLKYVLNLGLNTVR----LEGHIEP------------- 64
Query: 105 LDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARY 164
D FD A+ GV + + + W +S+ A + A R
Sbjct: 65 -DEFFDIADDLGVLTMPGWECCDK---WEGQVNGEEKGEPWVESDYPIAKASMFSEAERL 120
Query: 165 ANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213
+ PS+ + + ++ KA D + A S
Sbjct: 121 RDHPSVISFHIGSDFAPDRRIEQGYLDAMKA-ADFLLPVIPAASARPSP 168
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 100.0 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 100.0 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.95 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.94 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.92 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.91 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.9 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.85 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.85 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.84 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.84 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.83 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.83 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.82 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 99.8 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.8 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.8 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.79 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.78 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 99.77 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.69 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.69 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.66 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 99.6 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.36 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.36 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 99.25 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.22 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 99.2 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 99.14 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 99.1 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 99.08 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 99.08 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.03 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 99.02 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.99 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.97 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.83 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 98.59 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.55 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 98.54 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.48 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 98.4 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 98.35 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 98.18 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 98.04 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 97.87 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 97.16 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 97.14 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 97.03 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 96.93 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.9 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 96.83 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 96.82 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 96.77 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 96.65 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 96.64 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 96.51 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 96.34 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 96.28 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 96.25 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 96.11 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 96.07 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 96.07 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 96.02 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 95.94 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 95.94 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 95.73 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 95.71 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 95.57 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 95.46 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 95.36 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 95.33 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 95.31 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 95.3 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 95.19 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 95.08 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 95.02 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 94.79 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 94.77 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 94.53 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 93.83 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 93.75 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 93.16 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 93.13 | |
| d1odza_ | 381 | Mannanase A, ManA {Pseudomonas cellulosa (Cellvibr | 92.5 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 91.58 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 91.39 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 89.58 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 87.31 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 87.18 | |
| d1i60a_ | 278 | Hypothetical protein IolI {Bacillus subtilis [TaxI | 87.17 | |
| d1olta_ | 441 | Oxygen-independent coproporphyrinogen III oxidase | 87.14 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 86.31 | |
| d1w0ma_ | 226 | Triosephosphate isomerase {Thermoproteus tenax [Ta | 85.18 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 83.36 | |
| d2q02a1 | 271 | Putative cytoplasmic protein STM4435 {Salmonella t | 82.13 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 81.57 |
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=2.2e-55 Score=415.84 Aligned_cols=319 Identities=33% Similarity=0.581 Sum_probs=258.6
Q ss_pred ccCC-CCccc----CCcccccccccC-----CcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCc
Q 019395 14 DYGS-SSWDD----SDPSVFKLNIVS-----TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPV 83 (341)
Q Consensus 14 ~~~~-~~~~~----~~p~~f~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi 83 (341)
.|.. |+|.. ++|++|...... .+.+|+++++.+|.+.+...|+.||++|||++||+.||++|||+|||||
T Consensus 10 rGvNlGgwlv~E~w~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~G~N~VRiPv 89 (394)
T d2pb1a1 10 RGVNLGGWFVLEPYMTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPI 89 (394)
T ss_dssp EEEECTTSSSCCTTTCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHTTCCEEEEEE
T ss_pred EEEecchhhccCcccCchhhhhccCCCccccccchHHHHHHHhChHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEEe
Confidence 4556 88855 689999765432 3578999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 84 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
+||.+..+ +++++.++.+++||++|++|+++||+||||||..||++++.+++|... ...|. +.++++++++|+.||+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~ia~ 167 (394)
T d2pb1a1 90 GYWAFQLL-DNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRD-SYNFQNGDNTQVTLNVLNTIFK 167 (394)
T ss_dssp EGGGTCCC-TTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTT-CCCTTSTTHHHHHHHHHHHHHH
T ss_pred cHHHhcCC-CCCccchhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcCCcCccC-ccccccHHHHHHHHHHHHHHHH
Confidence 99877544 446788889999999999999999999999999999999998887543 33455 8899999999999999
Q ss_pred HhCCCC---ceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCC-ChhhhhhccCCCCcEEEEee
Q 019395 163 RYANRP---SLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DHKELLSFASGLSRVVIDVH 238 (341)
Q Consensus 163 ~y~~~~---~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~-~~~~~~~~~~~~~~~v~~~H 238 (341)
||++++ .|++|||+|||..+....+.+++++++++++||+++|+++|++++++.+. .+..++..+....++|+++|
T Consensus 168 ~~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~~vv~d~H 247 (394)
T d2pb1a1 168 KYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHH 247 (394)
T ss_dssp HHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEE
T ss_pred HHccCCCCCceEEEeecccCCcccccHHHHHHHHHHHHHHHHHhCCCCeEEEcCCCcchhhhhhhccCCCCCceEEEeee
Confidence 999876 68999999999875566789999999999999999999999999876543 34455554456789999999
Q ss_pred ecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC-----------------------------
Q 019395 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV----------------------------- 289 (341)
Q Consensus 239 ~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~----------------------------- 289 (341)
+|.+|+......+..+++...+.... ... ....|+++|||+.+.+.
T Consensus 248 ~Y~~f~~~~~~~~~~~~i~~~~~~~~----~~~-~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~ 322 (394)
T d2pb1a1 248 HYQVFSGGELSRNINDHISVACNWGW----DAK-KESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQP 322 (394)
T ss_dssp CCSCSSHHHHTCCHHHHHHHHHHHHH----HHH-TCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGG
T ss_pred cccccCCccccCCHHHHHHhhhhhhh----hhh-cccCcceeceecccchhhhhhhcccccccccccccCCCcccccccc
Confidence 99999866666666666666554221 111 22345777777653211
Q ss_pred ----C---CCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC-CCCChHHHHHCCCccc
Q 019395 290 ----K---DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 340 (341)
Q Consensus 290 ----~---~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-~~W~~~~~~~~g~~~~ 340 (341)
. ....+.+++|+++|+++|+ .+.||+||+||+++ ++|||+.+++.|+||+
T Consensus 323 ~~d~~~~~~~~~~~~r~~~~aQ~~~~e-~~~GW~fWt~K~~~~~~W~~~~~~~~G~iP~ 380 (394)
T d2pb1a1 323 LLDISQWSDEHKTDTRRYIEAQLDAFE-YTGGWVFWSWKTENAPEWSFQTLTYNGLFPQ 380 (394)
T ss_dssp GSSGGGCCHHHHHHHHHHHHHHHHHHH-TTTEEEESCSCCSSCGGGCHHHHHHTTCSCS
T ss_pred ccChhhcCHHHHHHHHHHHHHHHHHHh-cCCcEEEeccccCCCCCCCHHHHHHCCCcCC
Confidence 0 0113567899999999997 56799999999887 8999999999999984
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.3e-55 Score=414.07 Aligned_cols=321 Identities=29% Similarity=0.516 Sum_probs=257.0
Q ss_pred eccCC-CCccc----CCcccccccccC------CcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 13 ADYGS-SSWDD----SDPSVFKLNIVS------TLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 13 ~~~~~-~~~~~----~~p~~f~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
..|.. |+|.. ++|++|...... ...||+++++.+|.+.+...++.||++||||+||+.||++|||+|||
T Consensus 13 ~rGvNlGgWlv~E~wi~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~~i~~~G~N~VRi 92 (408)
T d1h4pa_ 13 IRGVNIGGWLLLEPYITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRI 92 (408)
T ss_dssp EEEEECTTSSSCCTTTSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEE
T ss_pred eeEEecchhhccccccCchhhhhccccccccccccchHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEE
Confidence 35666 88855 789999865532 35689999999999999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCC-cccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHH
Q 019395 82 PVGWWIANDPTPPKP-FVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFL 160 (341)
Q Consensus 82 pi~~~~~~~~~~~~~-~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~l 160 (341)
||+||.+... +.++ +....+++||++|++|+++||+||||||+.||++++.+++|.......+.+.++++++++|+.|
T Consensus 93 Pi~~~~~~~~-~~~~~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 171 (408)
T d1h4pa_ 93 PIGYWAFQIL-DDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYI 171 (408)
T ss_dssp EEEGGGTCCC-TTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHHHHHHHHHHHHH
T ss_pred eccHHHhcCC-CCCCCcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCCCCcCCCCCCcccccccCCchHHHHHHHHHHHH
Confidence 9999976543 3334 3456899999999999999999999999999999999988865433333388999999999999
Q ss_pred HHHhCCC---CceeEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCC-CceEEEeCCCCCCC-hhhhhhccCCCCcEE
Q 019395 161 AARYANR---PSLAAIELINEPLAPGVA-LDTLKSYYKAGYDAVRKYTS-TAYVIMSNRLGPAD-HKELLSFASGLSRVV 234 (341)
Q Consensus 161 a~~y~~~---~~v~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p-~~~v~~~~~~~~~~-~~~~~~~~~~~~~~v 234 (341)
|+||+++ +.|+||||+|||..+... .+.+..++++++++||+..+ +.+|+++++|.+.. +..++.......+++
T Consensus 172 a~r~~~~~~~~~v~g~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~~~~~~~~~~vv 251 (408)
T d1h4pa_ 172 LKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVT 251 (408)
T ss_dssp HHHTTSHHHHTTEEEEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEE
T ss_pred HHHhcccccccceeeeecccCccccccchHHHHHHHHHHHHHHHHhccccCceEEEecCCCChhhhhhhcccCCCCceeE
Confidence 9999996 579999999999864333 34678899999999998654 56778888876533 456665545678899
Q ss_pred EEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC------------------------
Q 019395 235 IDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK------------------------ 290 (341)
Q Consensus 235 ~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~------------------------ 290 (341)
+++|+|.+|+......+..+.+..++..... ..+ ...|+++|||+++.+.+
T Consensus 252 ~D~H~Y~~f~~~~~~~s~~~~i~~~~~~~~~----~~~-~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~ 326 (408)
T d1h4pa_ 252 IDHHHYQVFASDQLERSIDEHIKVACEWGTG----VLN-ESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTS 326 (408)
T ss_dssp EEEEECSCSSHHHHTCCHHHHHHHHHHHHHH----HTT-CSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCC
T ss_pred eeccceeeecCCcccCChhhhhhhhhhhhhh----hhc-ccCCcccccccccccchhhhcccccccceeecccccCCcCc
Confidence 9999999987666667777777776654322 122 35679999998753210
Q ss_pred ----------------CCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC-CCCChHHHHHCCCccc
Q 019395 291 ----------------DASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA-NHWSLKWMIENGYIKL 340 (341)
Q Consensus 291 ----------------~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~-~~W~~~~~~~~g~~~~ 340 (341)
...++.+++|.++|+++|+ .+.||+||+||+|+ ++|||+.+++.|+||+
T Consensus 327 ~~~g~c~~~~~~~~~~~~~~~~~r~~~eaQ~~~ye-~~~GW~fWt~K~e~~~~W~~~~~~~~g~iP~ 392 (408)
T d1h4pa_ 327 SYIGSCANNDDIAYWSDERKENTRRYVEAQLDAFE-MRGGWIIWCYKTESSLEWDAQRLMFNGLFPQ 392 (408)
T ss_dssp CBCSCCTTTTCGGGCCHHHHHHHHHHHHHHHHHHT-TTTEEEESCSCCSSCSTTCHHHHHHTTSSCS
T ss_pred cccccccccCChhhCCHHHHHHHHHHHHHHHHHHh-cCCCEEEeeeeCCCCCCCCHHHHHHCCCcCC
Confidence 0113456889999999998 47899999999998 8999999999999985
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=7.1e-44 Score=330.41 Aligned_cols=255 Identities=20% Similarity=0.342 Sum_probs=194.1
Q ss_pred HHHHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 55 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 55 ~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
.++||++++||+||+.||++|||+|||||+|+.+....+...++++.+++||++|++|+++||+||||+|+.|+.+....
T Consensus 21 ~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p~~~~~~~ 100 (340)
T d1ceoa_ 21 SKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDF 100 (340)
T ss_dssp CHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC------
T ss_pred chhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 34899999999999999999999999999998776554556778889999999999999999999999999998765433
Q ss_pred CCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 135 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 135 ~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
.. ...|. +..+++++++|+.||+||+++|.|++|||+|||+. ...+.|.+++++++++||+++|+++|++++
T Consensus 101 ~~-----~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~--~~~~~~~~~~~~~~~aIR~~dp~~~I~v~g 173 (340)
T d1ceoa_ 101 KT-----STLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVE--PDSTRWNKLMLECIKAIREIDSTMWLYIGG 173 (340)
T ss_dssp -------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCC--SSSHHHHHHHHHHHHHHHHHCSSCCEEEEC
T ss_pred cc-----ccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCC--CCHHHHHHHHHHHHHHHHhcCCCcEEEeCC
Confidence 22 12244 67889999999999999999999999999999985 356789999999999999999999999985
Q ss_pred C-CCCCChhhhhhc-cCCCCcEEEEeeecCCCCccccCccc---------------------------------------
Q 019395 214 R-LGPADHKELLSF-ASGLSRVVIDVHYYNLFSNNFNGLNV--------------------------------------- 252 (341)
Q Consensus 214 ~-~~~~~~~~~~~~-~~~~~~~v~~~H~Y~~~~~~~~~~~~--------------------------------------- 252 (341)
. |.+ ...+..+ ...++|+++++|.|.|+. ++++..
T Consensus 174 ~~~~~--~~~~~~~~~~~d~nv~~~~H~Y~p~~--fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 249 (340)
T d1ceoa_ 174 NNYNS--PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELN 249 (340)
T ss_dssp HHHHC--GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGT
T ss_pred CCcCC--chhhhcCCCCCCCCEEEEEeccCccc--cccccccccccccccccccCCCccccccccccccccccccccccc
Confidence 3 321 2233332 246789999999998752 111100
Q ss_pred --hhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 253 --QQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
......+... ...+..+.++.+.||+|||||+.. ..+.+...+|++++++++++.++||++|+|+..+
T Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~g~Pv~igEFG~~~---~~~~~~~~~~~~~~~~~~~~~~igw~~W~~~~~~ 319 (340)
T d1ceoa_ 250 NLKLNKELLRKD-LKPAIEFREKKKCKLYCGEFGVIA---IADLESRIKWHEDYISLLEEYDIGGAVWNYKKMD 319 (340)
T ss_dssp TCEESHHHHHHH-HHHHHHHHHHHCCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBSTT
T ss_pred cccccHHHHHHH-HHHHHHHHHHcCCCEEEEccCCcC---CCCHHHHHHHHHHHHHHHHHcCCcEEEeCCCCCC
Confidence 0001122211 123344556668889999999754 2356667889999999999999999999998743
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=2.1e-39 Score=301.27 Aligned_cols=264 Identities=18% Similarity=0.273 Sum_probs=185.5
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCC----------CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPP----------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGN 133 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~----------~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~ 133 (341)
.++||+.||++|||+|||||+|+.+.+.... ..+...++++||++|++|+++||+||||||..++..+..
T Consensus 46 ~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~ 125 (358)
T d1ecea_ 46 YRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSA 125 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCS
T ss_pred HHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHHHCCCceeeecccccccCCCc
Confidence 3999999999999999999999876543211 122356899999999999999999999999876543321
Q ss_pred CCCCCCCCccCCc--hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-----CChHHHHHHHHHHHHHHHhcCCC
Q 019395 134 EHSATRDGFQEWG--DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-----VALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 134 ~~~g~~~~~~~w~--~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.|. +...++++++|+.|++||+++|.|++|||+|||..+. .....+.+++++++++||+++|+
T Consensus 126 ----------~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~ 195 (358)
T d1ecea_ 126 ----------LWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPN 195 (358)
T ss_dssp ----------SSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTT
T ss_pred ----------cccCChHHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCC
Confidence 122 4678899999999999999999999999999998632 23467899999999999999999
Q ss_pred ceEEEeCCCC--------CCChhhhhh---ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCC
Q 019395 207 AYVIMSNRLG--------PADHKELLS---FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNG 275 (341)
Q Consensus 207 ~~v~~~~~~~--------~~~~~~~~~---~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
++|++++... ......... .....+++|+++|.|.++...............+.......+..+.++.+
T Consensus 196 ~~v~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (358)
T d1ecea_ 196 LLIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNI 275 (358)
T ss_dssp SEEEEECBSEETTEECSTTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTS
T ss_pred cEEEEeccccCccccccccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHhcC
Confidence 9999974211 011111111 11345789999999987643222222222222233333334445556667
Q ss_pred CceEEEeecCCCCCCCCCHHH----HHHHHHHHHHHHccCCCcEEEeccccCC--------CCCChHHHHHCCCccc
Q 019395 276 PLTFVGEWTCEWNVKDASKQD----YQRFANAQLDVYGRATFGWAYWAHKCEA--------NHWSLKWMIENGYIKL 340 (341)
Q Consensus 276 ~pv~vGE~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Gw~~W~~k~~~--------~~W~~~~~~~~g~~~~ 340 (341)
.||+|||||+.... ..... +..|++.+. .+...++||+||+||+++ .+|+....++.|+|+.
T Consensus 276 ~Pv~igEfG~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~gw~~W~~k~~~~~~~G~~~~dw~~~~~~~~~~i~~ 349 (358)
T d1ecea_ 276 APVWLGEFGTTLQS--TTDQTWLKTLVQYLRPTA-QYGADSFQWTFWSWNPDSGDTGGILKDDWQTVDTVKDGYLAP 349 (358)
T ss_dssp SCEEEEECCCCCCS--HHHHHHHHHHHHHTCCHH-HHTTSSCEEEESCSCSCCTTTCCSBCTTSSSBCHHHHHHHGG
T ss_pred CeEEEecCCCCCCC--CChHHHHHHHHHHHHHHH-HhcccCceEEEEcCCCCCCCCcceecCCCCCCChhhhhhccc
Confidence 78999999987642 12222 334444333 344578999999999875 4698888888888764
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=5.6e-39 Score=292.82 Aligned_cols=242 Identities=16% Similarity=0.158 Sum_probs=176.4
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
.|+ +|++++||+.||++|||+|||||.|+.+.+......++++.+++|+++|++|.++||+||||+|+.....+
T Consensus 27 ~~~-~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~~~~~~~----- 100 (305)
T d1h1na_ 27 KDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYN----- 100 (305)
T ss_dssp TTB-CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETT-----
T ss_pred CCc-ccCCHHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHHHHHHHHHhcCCeEEEecccCCcccc-----
Confidence 455 68899999999999999999999998766544445678889999999999999999999999998743211
Q ss_pred CCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC-CCceEEEeCC-
Q 019395 137 ATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNR- 214 (341)
Q Consensus 137 g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~-p~~~v~~~~~- 214 (341)
.. ....+++.++|++||++|++++.| +|||+|||+ ..+.+.|..++++++++||+++ ++++|+++..
T Consensus 101 -----~~---~~~~~~~~~~W~~ia~~~~~~~~v-~~el~NEP~--~~~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~~~ 169 (305)
T d1h1na_ 101 -----SI---ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYH--DMDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNS 169 (305)
T ss_dssp -----EE---CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCC--SSCHHHHHHHHHHHHHHHHHTTCCSSCEEEECTG
T ss_pred -----cc---cccHHHHHHHHHHHHHHhCCCCee-EEEeccCCC--CccHHHHHHHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 00 134578899999999999999987 599999998 4567899999999999999998 5677887743
Q ss_pred CCCC-Ch----hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC
Q 019395 215 LGPA-DH----KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289 (341)
Q Consensus 215 ~~~~-~~----~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~ 289 (341)
|... .+ ..+....++.+|+||++|.|.+++.... ..+.............+..+.+.++.|++|||||...+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~g~p~~igEfG~~~~- 246 (305)
T d1h1na_ 170 WTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDGSGT--SATCVSSTIGQERITSATQWLRANGKKGIIGEFAGGAD- 246 (305)
T ss_dssp GGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTTSSSC--CSCCSCTTHHHHHHHHHHHHHHHTTCCEEEEEEECCSS-
T ss_pred ccccccccccCcccccCCCCCCCEEEEEEeCCCCCCCCc--cccccccchHHHHHHHHHHHHHHcCCcEEEEcCCCCCC-
Confidence 3221 11 1222233456799999999987653221 11111111112222334456677788999999997532
Q ss_pred CCCCHHHHHHHHHHHHHHHccCC---CcEEEeccccC
Q 019395 290 KDASKQDYQRFANAQLDVYGRAT---FGWAYWAHKCE 323 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~---~Gw~~W~~k~~ 323 (341)
+....+++.+++.+++.+ +||++|+.+.-
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~gw~~W~~g~~ 278 (305)
T d1h1na_ 247 -----NVCETAITGMLDYMAQNTDVWTGAIWWAAGPW 278 (305)
T ss_dssp -----HHHHHHHHHHHHHHHTCTTTEEEEEEEEECTT
T ss_pred -----CcHHHHHHHHHHHHHHcCCcceEEEEecCCCC
Confidence 345577888888888776 77888887643
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.6e-38 Score=290.14 Aligned_cols=257 Identities=20% Similarity=0.287 Sum_probs=192.5
Q ss_pred HHHHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 55 LQDHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 55 ~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
++.|+.++++|+||+.||++|||+|||||.|+.+.+..++..++++.|++|+++|++|.++||+||||+|+.||.+++..
T Consensus 13 ~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~~~ 92 (325)
T d1vjza_ 13 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKE 92 (325)
T ss_dssp SSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTT
T ss_pred hhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccCcc
Confidence 33677788999999999999999999999998877655555677889999999999999999999999999999877655
Q ss_pred CCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCceE
Q 019395 135 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 135 ~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
.+. ....|. ...+++++.+|+.++++|++++ .+++|||+|||..+ ....+.+.+++++++++||+++|+++|
T Consensus 93 ~~~---~~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v 169 (325)
T d1vjza_ 93 VEE---KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLI 169 (325)
T ss_dssp SCC---SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred ccc---ccccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHhccCCCcEE
Confidence 443 234455 7788999999999999999875 57899999999853 245678999999999999999999999
Q ss_pred EEeCCCCCCChhhhhhccCCCCcEEEEeeecCCCCccccC-----------c--------cchhhhHHHHhhhhhhhhhh
Q 019395 210 IMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSNNFNG-----------L--------NVQQNIDYVNNQRASDLGAV 270 (341)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~-----------~--------~~~~~~~~~~~~~~~~~~~~ 270 (341)
++++.. +...........++++++|.|.++...... . ........+...+. .+...
T Consensus 170 ~v~g~~----~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (325)
T d1vjza_ 170 IIDGLG----YGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYL-TWIKL 244 (325)
T ss_dssp EEECHH----HHTBCCTTCCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHH-HHHGG
T ss_pred EecCCc----cccccCCcccccceeeeecccccccccccccccccccccccCCCCccccccccccHHHHHHHHH-HHHHH
Confidence 998521 111111224567899999999765321000 0 00001111111111 11122
Q ss_pred hccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 271 TTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 271 ~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
. ..+.||+|||||+.. ..+.+...+|++++++++++.++||++|+||..
T Consensus 245 ~-~~g~Pv~~gEfG~~~---~~~~~~~~~~~~~~l~~~~~~g~g~~~W~~~~~ 293 (325)
T d1vjza_ 245 R-QKGIEVFCGEMGAYN---KTPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 293 (325)
T ss_dssp G-GGTCEEEEEEECCCT---TSCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred H-hcCCCEEEeeccCcC---CCCcHHHHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 2 236689999999743 346677889999999999999999999999854
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=2.5e-36 Score=283.44 Aligned_cols=254 Identities=17% Similarity=0.214 Sum_probs=183.2
Q ss_pred HHHHh-hccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 56 QDHWD-SYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 56 ~~~~~-~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
|..|. ..+|+++|+.||++|||+|||||.|+.++++.+ ..+++..|++|+++|++|.++||+||||+|+.++.+++..
T Consensus 54 e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~-~~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~ 132 (380)
T d1edga_ 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSD-YKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF 132 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTT-TEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC
T ss_pred CCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCCCC-CccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC
Confidence 46775 458999999999999999999999987776543 4677889999999999999999999999999987765443
Q ss_pred CCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC---------------hHHHHHHHHHHHH
Q 019395 135 HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA---------------LDTLKSYYKAGYD 198 (341)
Q Consensus 135 ~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~---------------~~~~~~~~~~~~~ 198 (341)
.++ |. ....+++.++|++||+||++++.+++||++|||+..... ...+.++++.+++
T Consensus 133 ~~~-------~~~~~~~~~~~~~W~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (380)
T d1edga_ 133 PSS-------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVN 205 (380)
T ss_dssp SSG-------GGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-------cCcHHHHHHHHHHHHHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHH
Confidence 322 33 678889999999999999999999999999999863211 1357889999999
Q ss_pred HHHhcC---CCceEEEeCCCCCCCh--hhhhhc----cCCCCcEEEEeeecCCCCccccC----------ccchhhhHHH
Q 019395 199 AVRKYT---STAYVIMSNRLGPADH--KELLSF----ASGLSRVVIDVHYYNLFSNNFNG----------LNVQQNIDYV 259 (341)
Q Consensus 199 aIR~~~---p~~~v~~~~~~~~~~~--~~~~~~----~~~~~~~v~~~H~Y~~~~~~~~~----------~~~~~~~~~~ 259 (341)
+||+++ |+++|++++...+.+. ...+.. ...++++++++|+|.|+...... .........+
T Consensus 206 ~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d~~~~~~~li~s~H~Y~p~~f~~~~~~~~~~~~~~~~~~~~~~~i 285 (380)
T d1edga_ 206 TVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEV 285 (380)
T ss_dssp HHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHHHHTSCGGGTCCCCCCTTCHHHHHHH
T ss_pred HHHHhccCCCceEEEeCCCccCCccccchhhcccccccCCCCCEEEEEeecCccccccccCCcCCCCccccCccccHHHH
Confidence 999986 5677888753322111 111111 13467999999999886421100 0111111122
Q ss_pred HhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 260 NNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 260 ~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
...+ ..+..+.++.+.||+|||||+... ...+...+|++.+++..++.+++|++|...
T Consensus 286 ~~~~-~~~~~~~~~~giPviiGEfG~~~~---~~~~~r~~~~~~~~~~a~~~gi~~~~Wdn~ 343 (380)
T d1edga_ 286 TWFM-DNIYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNN 343 (380)
T ss_dssp HHHH-HHHHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred HHHH-HHHHHHHHhcCceEEEecccCcCC---CChHHHHHHHHHHHHHHHHcCCcEEEECCC
Confidence 2111 223333445577899999998653 245566778888888888899999999754
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=2.1e-35 Score=268.51 Aligned_cols=270 Identities=17% Similarity=0.242 Sum_probs=185.0
Q ss_pred CceeeeccCCCCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHH-HCCCCEEEcCcccc
Q 019395 8 ETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLS-SNGINAVRIPVGWW 86 (341)
Q Consensus 8 ~~~~~~~~~~~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~-~~G~N~VRlpi~~~ 86 (341)
-|.++.+|+...-....|-++.+.+. .|. ..+..+++++||+.|+ ++|+|+||+|+...
T Consensus 6 ~g~l~v~g~~ivd~nG~~v~lrGvn~------------~~~--------~~~~~~~~~~~~~~l~~~~G~N~VR~~~~~~ 65 (300)
T d7a3ha_ 6 HGQLSISNGELVNERGEQVQLKGMSS------------HGL--------QWYGQFVNYESMKWLRDDWGINVFRAAMYTS 65 (300)
T ss_dssp HCSCEEETTEEECTTSCBCCCEEEEE------------SCH--------HHHGGGCSHHHHHHHHHHTCCCEEEEEEESS
T ss_pred CCeEEEeCCEEECCCCCEEEEEEEeC------------CCc--------ccccccCCHHHHHHHHHHcCCCEEEEeeEcC
Confidence 35666677663323355666666431 111 3455678899999986 69999999998542
Q ss_pred cccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCC
Q 019395 87 IANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYAN 166 (341)
Q Consensus 87 ~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~ 166 (341)
+ .....++..+++||++|++|.++||+||||+|..++... ..+.+++.++|+.+++|||+
T Consensus 66 ----~-~~~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~~---------------~~~~~~~~~~w~~ia~ryk~ 125 (300)
T d7a3ha_ 66 ----S-GGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFDEMSELYGD 125 (300)
T ss_dssp ----T-TSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHHHHHHHHTT
T ss_pred ----c-cCcccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCCC---------------hhhHHHHHHHHHHHHHHhCC
Confidence 1 112345778999999999999999999999998754311 24578899999999999999
Q ss_pred CCceeEEEeecCCCCCCC-ChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhhhccCCCCcEEEEeeecCCCCc
Q 019395 167 RPSLAAIELINEPLAPGV-ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLSRVVIDVHYYNLFSN 245 (341)
Q Consensus 167 ~~~v~~~el~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~ 245 (341)
+|.|+ |||+|||..... ..+.+..++++++++||+++|+++|++++.............+..++++++++|.|.++..
T Consensus 126 ~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~niv~~~H~Y~~~~~ 204 (300)
T d7a3ha_ 126 YPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAFHFYAGTHG 204 (300)
T ss_dssp CTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEEEEETTSCC
T ss_pred CCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCcccccchhhcCCCCCCCEEEEECCccCcCc
Confidence 99986 999999986433 3468999999999999999999999998532212222222333567899999999987532
Q ss_pred cccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC-CCCCHHHHHHHHHHHHHHHccCCCcEEEeccccCC
Q 019395 246 NFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVYGRATFGWAYWAHKCEA 324 (341)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~ 324 (341)
....+. +.. ....+.||+|||||+.... .... ...++++.++.++++++||++|+|+...
T Consensus 205 -------~~~~~~--------~~~-~~~~~~Pv~~gEfG~~~~~~~~~~---~~~~~~~~~~~~~~~~igw~~W~~~~~~ 265 (300)
T d7a3ha_ 205 -------QNLRDQ--------VDY-ALDQGAAIFVSEWGTSAATGDGGV---FLDEAQVWIDFMDERNLSWANWSLTHKD 265 (300)
T ss_dssp -------HHHHHH--------HHH-HHHTTCCEEEEEEESSCTTSCSCC---CHHHHHHHHHHHHHTTCCEEEEEESCCS
T ss_pred -------ccHHHH--------HHH-HHhcCCCEEEeecCCccCCCCCCc---CHHHHHHHHHHHHHcCCeEEEEeCcCCC
Confidence 111111 111 1234668999999986421 1111 1234444566677889999999997332
Q ss_pred -------------CCCChHHHHHCCC
Q 019395 325 -------------NHWSLKWMIENGY 337 (341)
Q Consensus 325 -------------~~W~~~~~~~~g~ 337 (341)
+.|+...+.+.|.
T Consensus 266 ~~~~~~~~~~~~~~~w~~~~l~~~G~ 291 (300)
T d7a3ha_ 266 ESSAALMPGANPTGGWTEAELSPSGT 291 (300)
T ss_dssp STTCSBCTTCCTTCCCCGGGBCHHHH
T ss_pred CCcceeecCCCcCCCCCcccccHHHH
Confidence 4677666555543
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=100.00 E-value=2.2e-35 Score=267.50 Aligned_cols=223 Identities=17% Similarity=0.214 Sum_probs=163.9
Q ss_pred hccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 139 (341)
Q Consensus 61 ~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~ 139 (341)
.++++++++.|+ ++|+|+||+||+++... +...+..++..+++||++|++|+++||+||||+|....
T Consensus 37 ~~~~~~~~~~l~~~~g~N~VR~~~~~~~~~-~~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~~----------- 104 (293)
T d1tvna1 37 KFYTAETVAKAKTEFNATLIRAAIGHGTST-GGSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA----------- 104 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECCTTS-TTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred cccCHHHHHHHHHhCCCcEEEEeccccccc-ccccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCCC-----------
Confidence 356789999987 58999999999876443 33334556778999999999999999999999997632
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Q 019395 140 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD 219 (341)
Q Consensus 140 ~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~ 219 (341)
...++.+.++|+.|++|||++|.|+ |||+|||+. ......+++++++++++||+++|+++|++++......
T Consensus 105 -------~~~~~~~~~~w~~~a~r~k~~~~V~-~el~NEP~~-~~~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~ 175 (293)
T d1tvna1 105 -------HTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQ-ISWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQD 175 (293)
T ss_dssp -------GGCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCS-CCTTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCCeEE-EEEecccCC-CCcHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccccc
Confidence 1457899999999999999999987 999999986 3345789999999999999999999999985322233
Q ss_pred hhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC-CCCCHHHHH
Q 019395 220 HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQ 298 (341)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~-~~~~~~~~~ 298 (341)
.......+..+.++|+++|.|.++.. +...+.+ .. ....+.||+|||||+.... .... ..
T Consensus 176 ~~~~~~~~~~~~~~v~s~H~Y~~~~~-------~~~~~~~--------~~-~~~~g~Pv~vgEfG~~~~~~~~~~---~~ 236 (293)
T d1tvna1 176 VDVASQNPIDRANIAYTLHFYAGTHG-------QSYRNKA--------QT-ALDNGIALFATEWGTVNADGNGGV---NI 236 (293)
T ss_dssp HHHHHHSCCCSSSEEEEEEEETTTCC-------HHHHHHH--------HH-HHHTTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhcCCccCCCceEEEEeeccccc-------hHHHHHH--------HH-HHhcCCCeEeeccCCcccCCCCCC---CH
Confidence 33444444577899999999987532 1111111 11 2234678999999976421 1111 12
Q ss_pred HHHHHHHHHHccCCCcEEEeccccC
Q 019395 299 RFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 299 ~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.++++.++.+++.++||++|+|+..
T Consensus 237 ~~~~~~~~~~~~~~igw~~W~~~d~ 261 (293)
T d1tvna1 237 NETDAWMAFFKTNNISHANWALNDK 261 (293)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCS
T ss_pred HHHHHHHHHHHHhCCeEEEEEeecC
Confidence 3344445566677899999999744
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=3.3e-35 Score=266.33 Aligned_cols=228 Identities=14% Similarity=0.208 Sum_probs=168.8
Q ss_pred HhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 59 WDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 59 ~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
|....+++||+.||++|+|+||||+.+. ..+.++.+++||++|++|.++||+||||+|..++...
T Consensus 29 ~~~~~~~~d~~~~~~~G~N~VRl~~~~~--------~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~~------- 93 (297)
T d1wkya2 29 WYKDQATTAIEGIANTGANTVRIVLSDG--------GQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS------- 93 (297)
T ss_dssp GCGGGHHHHHHHHHTTTCSEEEEEECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC-------
T ss_pred cCchHHHHHHHHHHHCCCcEEEEeccCC--------CccCccHHHHHHHHHHHHHHCCCceEeeccccccccc-------
Confidence 3344568999999999999999998642 3566778999999999999999999999998754311
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPA 218 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~ 218 (341)
....+.+.++|+.+++||+++|.|++|+++|||.. ......+..++++++++||+++|+++|++++...+.
T Consensus 94 --------~~~~~~~~~~w~~~a~~~~~~p~v~~~~l~NEp~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~ 164 (297)
T d1wkya2 94 --------IASLNRAVDYWIEMRSALIGKEDTVIINIANEWFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWGQ 164 (297)
T ss_dssp --------HHHHHHHHHHHHHTGGGTTTCTTTEEEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTT
T ss_pred --------cccHHHHHHHHHHHHHHhcCCCCEEEEeccccccc-cchhhhhhhhhhhhHHHHHhcCCCceEEEecCCccc
Confidence 36678899999999999999999999999999986 455678999999999999999999999998643333
Q ss_pred Chhhhhh------ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCC
Q 019395 219 DHKELLS------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDA 292 (341)
Q Consensus 219 ~~~~~~~------~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~ 292 (341)
....+.. ...+.+++++++|.|.++... ... +.. .+.. ....+.||+|||||+.......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~i~y~~H~Y~~~~~~------~~~---~~~----~~~~-~~~~g~Pv~vgEfG~~~~~~~~ 230 (297)
T d1wkya2 165 FPQSIHDYGREVFNADPQRNTMFSIHMYEYAGGN------ASQ---VRT----NIDR-VLNQDLALVIGEFGHRHTNGDV 230 (297)
T ss_dssp BTHHHHHHHHHHHHTCTTCCEEEEEEESTTTSSS------HHH---HHH----HHHH-HHTTTCCEEEEEECSEETTEEC
T ss_pred ccchhhhccccccCCCcccceeEeeccccCCCCC------hhh---HHH----HHHH-HhhcCCCEEEEeecccCCCCcH
Confidence 3322211 125678999999999765321 111 111 1111 1234678999999986532222
Q ss_pred CHHHHHHHHHHHHHHHccCCCcEEEeccccCCCCCChHH
Q 019395 293 SKQDYQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKW 331 (341)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W~~~~ 331 (341)
.. +++++.++++++||++|+|+...+.|++..
T Consensus 231 ~~-------~~~~~~~~~~~~gw~~W~~~~~~~~~~~~~ 262 (297)
T d1wkya2 231 DE-------STIMSYSEQRGVGWLAWSWKGNGPEWEYLD 262 (297)
T ss_dssp CH-------HHHHHHHHHTTCEEEESCSSCCCGGGGGGC
T ss_pred HH-------HHHHHHHHHcCCeEEEEEEECCCCCccccc
Confidence 22 234455667889999999998766666554
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=3e-35 Score=273.84 Aligned_cols=273 Identities=15% Similarity=0.173 Sum_probs=177.4
Q ss_pred ecCceeeeccCC-CCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHH-CCCCEEEcCc
Q 019395 6 ISETRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSS-NGINAVRIPV 83 (341)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~-~G~N~VRlpi 83 (341)
++-.+|+.+|+. ..-..+.|-.+.+.+. .|. ..+..++++++++.|++ +|+|+||||+
T Consensus 14 ~~~~~l~~~G~~~l~d~~G~~v~lrGv~~------------~~~--------~w~~~~~~~~~~~~l~~~~G~N~VRlp~ 73 (357)
T d1g01a_ 14 GALQLVELNGQLTLAGEDGTPVQLRGMST------------HGL--------QWFGEIVNENAFVALSNDWGSNMIRLAM 73 (357)
T ss_dssp CSCEEEEETTEEEEECTTSCBCCCEEEEE------------SCH--------HHHGGGCSHHHHHHHHTTSCCSEEEEEE
T ss_pred cCCCeEEEcCeEEEECCCCCEEEEEEEec------------Ccc--------hhcccccCHHHHHHHHHhcCCCEEEEee
Confidence 344566777764 3322345666665431 111 34567889999999985 8999999999
Q ss_pred ccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHH
Q 019395 84 GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAAR 163 (341)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~ 163 (341)
.+. + .+..++++++++||++|++|.++||+||||+|..++.... ....+.+.++|+.||+|
T Consensus 74 ~~~----~-~~~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~--------------~~~~~~~~~~W~~iA~r 134 (357)
T d1g01a_ 74 YIG----E-NGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPR--------------ADVYSGAYDFFEEIADH 134 (357)
T ss_dssp ESS----S-SSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTT--------------SGGGTTHHHHHHHHHHH
T ss_pred eec----C-CCCccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCCC--------------hhhhhhhHHHHHHHHHH
Confidence 653 2 2235567789999999999999999999999987643210 13445678899999999
Q ss_pred hCCCCc--eeEEEeecCCCCCCC----------ChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhhhhccCCCC
Q 019395 164 YANRPS--LAAIELINEPLAPGV----------ALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKELLSFASGLS 231 (341)
Q Consensus 164 y~~~~~--v~~~el~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~~~~~~~~~ 231 (341)
|+++|. +++|||+|||+.... ....++.++++++++||+.+++++|+.+..|. .........+..++
T Consensus 135 y~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~iiv~~~~w~-~~~~~~~~~~~~~~ 213 (357)
T d1g01a_ 135 YKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWS-QRPDLSADNPIDAE 213 (357)
T ss_dssp HTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHH-TCHHHHHHSCCSSS
T ss_pred HhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCCceEEEecCCcc-ccchhcccccCCCC
Confidence 999874 678999999986321 12578999999999999998765444333333 23333333334678
Q ss_pred cEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC-CCCCHHHHHHHHHHHHHHHcc
Q 019395 232 RVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV-KDASKQDYQRFANAQLDVYGR 310 (341)
Q Consensus 232 ~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 310 (341)
|+||++|+|.++.......................+.. ....+.||+|||||+.... .... ...+....++.+++
T Consensus 214 nvvys~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~Pv~vgEfG~~~~~~~~~~---~~~~~~~~~~~~~~ 289 (357)
T d1g01a_ 214 NIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRY-ALDNGVAVFATEWGTSQANGDGGP---YFDEADVWLNFLNK 289 (357)
T ss_dssp SEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHHHHHHH-HHHTTCCEEEEEEESSBTTTBSCC---CHHHHHHHHHHHHH
T ss_pred CEEEEEEEecCccCCccCCCCcccchHHHHHHHHHHHH-HHHcCCCEEEEecCCcCCCCCCCc---CHHHHHHHHHHHHH
Confidence 99999999987543211111100001111111112222 2334668999999976431 1111 12344445667778
Q ss_pred CCCcEEEecccc
Q 019395 311 ATFGWAYWAHKC 322 (341)
Q Consensus 311 ~~~Gw~~W~~k~ 322 (341)
+++||++|+++.
T Consensus 290 ~~isw~~W~~~~ 301 (357)
T d1g01a_ 290 HNISWANWSLTN 301 (357)
T ss_dssp TTCCEEEEEECC
T ss_pred cCCceEEEeCcC
Confidence 999999999974
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=100.00 E-value=1.5e-34 Score=261.79 Aligned_cols=226 Identities=19% Similarity=0.216 Sum_probs=163.7
Q ss_pred hccCHHHHHHHH-HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCC
Q 019395 61 SYITDEDFKFLS-SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATR 139 (341)
Q Consensus 61 ~~~~e~d~~~i~-~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~ 139 (341)
.+.++++++.|+ ++|+|+||+|+...... ......+..+++||++|++|.++||+||||+|...+
T Consensus 37 ~~~~~~~~~~l~~~~G~N~vR~~~~~~~~~---~~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~----------- 102 (291)
T d1egza_ 37 KFYTADTVASLKKDWKSSIVRAAMGVQESG---GYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA----------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECSSTT---STTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred cccCHHHHHHHHHhcCCCEEEEeccccccC---CcccCcHHHHHHHHHHHHHHHHCCCeEeeeeccCCC-----------
Confidence 457899999998 58999999999653211 111222457999999999999999999999998642
Q ss_pred CCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Q 019395 140 DGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPAD 219 (341)
Q Consensus 140 ~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~ 219 (341)
....+.+.++|+.|++|||++|.|+ |||+|||.. ....+.++.++++++++||+++|+++|++++.....+
T Consensus 103 -------~~~~~~~~~~w~~la~ryk~~p~v~-~el~NEP~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~ 173 (291)
T d1egza_ 103 -------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQ-VSWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQN 173 (291)
T ss_dssp -------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCS-CCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCccee-eeeccCcCC-CcchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 1457889999999999999999986 999999986 3445689999999999999999999999985322233
Q ss_pred hhhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC-CCCCCHHHHH
Q 019395 220 HKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN-VKDASKQDYQ 298 (341)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~-~~~~~~~~~~ 298 (341)
.......+...+++||++|.|.++... ...+.+ . .....++||+|||||+... ..... ..
T Consensus 174 ~~~~~~~~~~~~n~vys~H~Y~~~~~~-------~~~~~~--------~-~~~~~~~Pv~vgEfG~~~~~~~~~~---~~ 234 (291)
T d1egza_ 174 VDEASRDPINAKNIAYTLHFYAGTHGE-------SLRNKA--------R-QALNNGIALFVTEWGTVNADGNGGV---NQ 234 (291)
T ss_dssp HHHHHTSCCCSSSEEEEEEEETTTCCH-------HHHHHH--------H-HHHHTTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhhcccCCCcEEEEecccCCCCch-------hHHHHH--------H-HHHHcCCCeEecccCCcccCCCCCc---CH
Confidence 333333335678999999999875421 111111 1 1123467899999997532 11111 12
Q ss_pred HHHHHHHHHHccCCCcEEEeccccCCCCCC
Q 019395 299 RFANAQLDVYGRATFGWAYWAHKCEANHWS 328 (341)
Q Consensus 299 ~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W~ 328 (341)
.+++..++.++++++||++|+|+..+..|+
T Consensus 235 ~~~~~~~~~~~~~~i~w~~W~~~~~~~~~~ 264 (291)
T d1egza_ 235 TETDAWVTFMRDNNISNANWALNDKNEGAS 264 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCSSSTTC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeeCCCCCee
Confidence 345556677788999999999995544444
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=100.00 E-value=2.7e-33 Score=254.33 Aligned_cols=227 Identities=14% Similarity=0.204 Sum_probs=163.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++|+.||++|+|+||||+.+. ..+.+..++.++++|++|.++||+||||+|..++......
T Consensus 35 ~~~~~~i~~~G~N~VRl~~~~~--------~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~---------- 96 (302)
T d1bqca_ 35 TQAFADIKSHGANTVRVVLSNG--------VRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSG---------- 96 (302)
T ss_dssp TTHHHHHHHTTCSEEEEEECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTT----------
T ss_pred HHHHHHHHhcCCCEEEEecccc--------cccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCCCc----------
Confidence 5789999999999999998753 2344567899999999999999999999998765433211
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhh
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 223 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~ 223 (341)
+..++.+.+.|+.|++||+++|.+++|||+|||.... .....+..++++++++||+.+|+++|+++....+.++...
T Consensus 97 --~~~~~~~~~~w~~ia~~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~~ 174 (302)
T d1bqca_ 97 --ASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNT 174 (302)
T ss_dssp --CCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCH
T ss_pred --hHHHHHHHHHHHHHHHHhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchhh
Confidence 2567899999999999999999999999999998522 2235788999999999999999999999865433333221
Q ss_pred h-------hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHH
Q 019395 224 L-------SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD 296 (341)
Q Consensus 224 ~-------~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~ 296 (341)
. ...+..++++|++|.|.++... ..+... +....+ .++||+|||||+.........
T Consensus 175 ~~~~~~~~~~~~~~~~~vy~~H~Y~~~~~~----------~~~~~~----~~~~~~-~~~Pv~vgEfG~~~~~~~~~~-- 237 (302)
T d1bqca_ 175 MRNNADQVYASDPTGNTVFSIHMYGVYSQA----------STITSY----LEHFVN-AGLPLIIGEFGHDHSDGNPDE-- 237 (302)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEEESGGGCSH----------HHHHHH----HHHHHH-HTCCEEEEEECCTTSTTCCCH--
T ss_pred hccchhccccCCcccceEEEeeecCCCCCH----------HHHHHH----HHHhhh-cCCcEEEEecCCcCCCCcHHH--
Confidence 1 1124678999999999876421 111111 111122 266899999998653222222
Q ss_pred HHHHHHHHHHHHccCCCcEEEeccccCCCCCChHHHH
Q 019395 297 YQRFANAQLDVYGRATFGWAYWAHKCEANHWSLKWMI 333 (341)
Q Consensus 297 ~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W~~~~~~ 333 (341)
+.+++.++++++||++|+|+.....|++..+.
T Consensus 238 -----~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~ 269 (302)
T d1bqca_ 238 -----DTIMAEAERLKLGYIGWSWSGNGGGVEYLDMV 269 (302)
T ss_dssp -----HHHHHHHHHHTCEEEESCSSCCCTTTGGGCSB
T ss_pred -----HHHHHHHHHcCCeEEEEEecCCCCCcchhhcc
Confidence 33333444567999999999877666655433
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.95 E-value=2.2e-27 Score=218.07 Aligned_cols=281 Identities=18% Similarity=0.173 Sum_probs=175.7
Q ss_pred CceeeeccCCCCcccCCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccccc
Q 019395 8 ETRLTADYGSSSWDDSDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWWI 87 (341)
Q Consensus 8 ~~~~~~~~~~~~~~~~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~ 87 (341)
.++|+.+|.+-.. +++|-.|.+.+. +.+ .. ..+. ..+ +++|+.|+++|+|+||+++....
T Consensus 2 ~~~v~~~g~~f~~-nG~p~~~~G~N~------~~~-~~-~~~~------~~~-----~~~l~~~~~~G~N~iR~~~~~~~ 61 (344)
T d1qnra_ 2 SSFVTISGTQFNI-DGKVGYFAGTNC------YWC-SF-LTNH------ADV-----DSTFSHISSSGLKVVRVWGFNDV 61 (344)
T ss_dssp CCCCEEETTEEEE-TTEESCEEEEEC------GGG-GG-CCCH------HHH-----HHHHHHHHHTTCCEEECCCCCEE
T ss_pred CCcEEEECCEEEE-CCEEEEEEEEcc------CCC-Cc-CCCH------HHH-----HHHHHHHHhcCCCEEEECCcccc
Confidence 4677888877222 467877877541 111 11 1111 112 89999999999999999765432
Q ss_pred ccCCCC-------------CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC--CC-CCCCccCCc-hhHH
Q 019395 88 ANDPTP-------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH--SA-TRDGFQEWG-DSNV 150 (341)
Q Consensus 88 ~~~~~~-------------~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~--~g-~~~~~~~w~-~~~~ 150 (341)
..++.+ ...+.+..++.||+++++|+++||+||||+|..++...+... .+ .......+. +..+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (344)
T d1qnra_ 62 NTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQ 141 (344)
T ss_dssp SSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTTSHHHHHHHHHCSCTTGGGGCHHHH
T ss_pred cccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCccccccccccccccccccccccCCHHHH
Confidence 222211 123456789999999999999999999999987654321000 00 001112233 6778
Q ss_pred HHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CCCCCh---------
Q 019395 151 ADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LGPADH--------- 220 (341)
Q Consensus 151 ~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~~~~~--------- 220 (341)
+.+.++|+.+++||+++|.|++|+|.|||.....+...+..++++++++||+.+|+++|+++.. +.....
T Consensus 142 ~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~~~~v~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T d1qnra_ 142 TQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAYPYTYG 221 (344)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCCTTSCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCCCCEEEEccccccccccccccccccc
Confidence 8999999999999999999999999999987666678899999999999999999999998742 211100
Q ss_pred --hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHH
Q 019395 221 --KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQ 298 (341)
Q Consensus 221 --~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~ 298 (341)
..+.........+++++|.|.... ..........+. ......+..++||+|||||+..+ ......
T Consensus 222 ~~~d~~~~~~~~~~D~~~~H~Y~~~~----~~~~~~~~~~~~-----~~~~~~~~~~kPv~v~EfG~~~~----~~~~~~ 288 (344)
T d1qnra_ 222 EGTDFAKNVQIKSLDFGTFHLYPDSW----GTNYTWGNGWIQ-----THAAACLAAGKPCVFEEYGAQQN----PCTNEA 288 (344)
T ss_dssp SSCCHHHHHTCTTCCSEEEEECHHHH----TCCSTHHHHHHH-----HHHHHHHHTTSCEEEEEECCSSC----HHHHHH
T ss_pred cccchhhcccCCCceEEEEeecCccc----ccchhHHHHHHH-----HHHHHHhhcCCCEEEEecCcCCC----CCccHH
Confidence 011111122344589999994311 011111111111 11122334577899999998642 122222
Q ss_pred HHHHHHHHHHccCCCcEEEeccccC
Q 019395 299 RFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 299 ~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.+.... ......+|+++|+|...
T Consensus 289 ~~~~~~--~~~~~~~G~~~W~~~~~ 311 (344)
T d1qnra_ 289 PWQTTS--LTTRGMGGDMFWQWGDT 311 (344)
T ss_dssp HHHHHH--HTSTTEEEEEESCEECB
T ss_pred HHHHHH--HhccCcceEEEEEcCcc
Confidence 232221 22346779999999754
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.94 E-value=2.6e-26 Score=212.07 Aligned_cols=256 Identities=14% Similarity=0.116 Sum_probs=162.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc---cCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC-------
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA---NDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE------- 134 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~---~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~------- 134 (341)
+++|+.||++|+|+||+++..+.. ..+. ++.+++..++.||++|++|.++||+||+|+|...+...+..
T Consensus 42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~-~g~~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~~ 120 (370)
T d1rh9a1 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSA-PGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAV 120 (370)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEE-TTEECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEECCccCccCcccCCC-CCcccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCcccccccc
Confidence 889999999999999997643322 2222 24677889999999999999999999999997644321100
Q ss_pred CCC--CCCCccCCc-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCC-CChHHHHHHHHHHHHHHHh
Q 019395 135 HSA--TRDGFQEWG-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPG-VALDTLKSYYKAGYDAVRK 202 (341)
Q Consensus 135 ~~g--~~~~~~~w~-~~~~~~~~~~~~~la~~--------y~~~~~v~~~el~NEP~~~~-~~~~~~~~~~~~~~~aIR~ 202 (341)
..+ .......|. +...+.+.+.++.+++| |++++.|++|++.|||.... .+.+.+.+++++++++||+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~ 200 (370)
T d1rh9a1 121 QRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKS 200 (370)
T ss_dssp HTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHHh
Confidence 000 011122233 67788899999999987 58899999999999997632 4567899999999999999
Q ss_pred cCCCceEEEeCC-CCCCChhhh-h----------hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhh
Q 019395 203 YTSTAYVIMSNR-LGPADHKEL-L----------SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAV 270 (341)
Q Consensus 203 ~~p~~~v~~~~~-~~~~~~~~~-~----------~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (341)
++|+++|+++.. +........ . .........++++|.|.... ......... ..............
T Consensus 201 ~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~h~Y~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 277 (370)
T d1rh9a1 201 IDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQW--LPGLTQEAQ-DKWASQWIQVHIDD 277 (370)
T ss_dssp HCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHH--STTSCHHHH-HHHHHHHHHHHHHH
T ss_pred hCCCCeEEEeccccccccccccCCCcccccccccccccCCcceEEEeccccCcc--ccCCcchhh-hhHHHHHHHHHHHH
Confidence 999999998732 211110000 0 00012234578999995311 111111111 11111112222233
Q ss_pred hccCCCceEEEeecCCCCCCCCCHHHHH----HHHHHHHHHHcc--CCCcEEEeccccCC
Q 019395 271 TTSNGPLTFVGEWTCEWNVKDASKQDYQ----RFANAQLDVYGR--ATFGWAYWAHKCEA 324 (341)
Q Consensus 271 ~~~~~~pv~vGE~g~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~Gw~~W~~k~~~ 324 (341)
.+..++||+|||||......+....... .++....++..+ ...||+||+|+++.
T Consensus 278 ~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 337 (370)
T d1rh9a1 278 SKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQG 337 (370)
T ss_dssp HHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTT
T ss_pred HHhCCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEeeecCCC
Confidence 4445678999999987654444444333 333333333333 34699999999885
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.92 E-value=6.8e-25 Score=199.97 Aligned_cols=236 Identities=13% Similarity=0.074 Sum_probs=154.6
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCC-----CCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCC
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPT-----PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSAT 138 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~-----~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~ 138 (341)
+++||+.||++|+|+|||++.++....+. .+..+++..++.++++|+.|.++||+||+|+|..++.++.....
T Consensus 44 ~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~-- 121 (350)
T d2c0ha1 44 FESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL-- 121 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHH--
T ss_pred HHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCccc--
Confidence 38999999999999999998775433221 11234567899999999999999999999999886643321100
Q ss_pred CCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC---------------------------CCChHHHH
Q 019395 139 RDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP---------------------------GVALDTLK 190 (341)
Q Consensus 139 ~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~---------------------------~~~~~~~~ 190 (341)
....+. +...+.+.++|+.|++||+++|.|++|+|.|||... ......+.
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (350)
T d2c0ha1 122 --NGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEIG 199 (350)
T ss_dssp --HHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHHH
T ss_pred --CcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHHH
Confidence 011122 556778889999999999999999999999999741 11245688
Q ss_pred HHHHHHHHHHHhcCCCceEEEeC-CCC-C------CCh---hhhh--hccCCCCcEEEEeeecCCCCccccCccchhhhH
Q 019395 191 SYYKAGYDAVRKYTSTAYVIMSN-RLG-P------ADH---KELL--SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNID 257 (341)
Q Consensus 191 ~~~~~~~~aIR~~~p~~~v~~~~-~~~-~------~~~---~~~~--~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~ 257 (341)
.++..++.+||+.+|+++|.++. ... . ... ..+. .........+++.|.|...........
T Consensus 200 ~~~~~~~~~i~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~------ 273 (350)
T d2c0ha1 200 RFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESP------ 273 (350)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCT------
T ss_pred HHHHHHHHHHHHhCCCceEEecccccCcCcccccccccccccccchhhcccccccceeccccCCCCCcchhhhh------
Confidence 99999999999999999998862 110 0 000 0111 111234556899999975432111000
Q ss_pred HHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccccC
Q 019395 258 YVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHKCE 323 (341)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~~ 323 (341)
.... ......++||+|||||+..... ...+ .+++.. +.....|+++|+|...
T Consensus 274 -~~~~------~~~~~~~kPv~igEfg~~~~~~-~~~~---~~~~~~---~~~~~~G~~~W~~~d~ 325 (350)
T d2c0ha1 274 -FKHS------FSNFRLKKPMVIGEFNQEHGAG-MSSE---SMFEWA---YTKGYSGAWTWSRTDV 325 (350)
T ss_dssp -TSSC------GGGGCCSSCEEEEECCGGGSTT-CCHH---HHHHHH---HHTTCSEEEESCSSSS
T ss_pred -HHHH------HHhccCCCcEEEEecCCCCCCC-ccHH---HHHHHH---HHhCCeEEEEEeeecC
Confidence 0000 1122346789999999865422 2222 222222 3345679999999753
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.91 E-value=6e-24 Score=197.98 Aligned_cols=258 Identities=11% Similarity=0.093 Sum_probs=163.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccc---------cCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIA---------NDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~---------~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
++||+.||++|+|+||+++.+... ..+. .+.+++..+..+|++|++|+++||+||+|+|.......+...
T Consensus 44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~-~g~~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~ 122 (410)
T d1uuqa_ 44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNG-FGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 122 (410)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSS-TTCBCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCcccccccccccCCCcccc-cccccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCccc
Confidence 899999999999999997754322 1222 347888899999999999999999999999987543221000
Q ss_pred -----CCCCCC--------------ccCC-c-hhHHHHHHHHHHHHHHH--------hCCCCceeEEEeecCCCCCCC--
Q 019395 136 -----SATRDG--------------FQEW-G-DSNVADTVAVIDFLAAR--------YANRPSLAAIELINEPLAPGV-- 184 (341)
Q Consensus 136 -----~g~~~~--------------~~~w-~-~~~~~~~~~~~~~la~~--------y~~~~~v~~~el~NEP~~~~~-- 184 (341)
.+.... ...| . +...+.+.+.++.+++| ++++|.|++|+|.|||.....
T Consensus 123 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~ 202 (410)
T d1uuqa_ 123 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 202 (410)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred ccccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcc
Confidence 000000 0011 1 55677888999999987 689999999999999986321
Q ss_pred ---ChHHHHHHHHHHHHHHHhcCCCceEEEeCC-CC--CCChhhhhhccCCCCcEEEEeeecCCCCccccCccchh----
Q 019395 185 ---ALDTLKSYYKAGYDAVRKYTSTAYVIMSNR-LG--PADHKELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQ---- 254 (341)
Q Consensus 185 ---~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~-~~--~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~---- 254 (341)
..+.+..+++.++++||+.+|+++|.++.. +. ......+.........+++++|.|..+...........
T Consensus 203 ~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~ 282 (410)
T d1uuqa_ 203 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPS 282 (410)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHH
T ss_pred cccchhhhhHHHHHHHhhhhhcCCCceEeecccccccccccccchhhhccCCccceEEeecCcccccccccccccccccc
Confidence 245788999999999999999999988732 11 11122222222334556899999964322111111111
Q ss_pred hhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC----CCC----HHHHHHHHHHHHHHHcc--CCCcEEEeccccCC
Q 019395 255 NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK----DAS----KQDYQRFANAQLDVYGR--ATFGWAYWAHKCEA 324 (341)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~----~~~----~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~ 324 (341)
....... .......+.+..++|++++|||...... ... .+.+..+++.+.+.+.. ..+|+++|+|+...
T Consensus 283 ~~~~~~~-~~~~~~~~~~~~~kPv~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 361 (410)
T d1uuqa_ 283 AWEKAQN-YMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYG 361 (410)
T ss_dssp HHHHHHH-HHHHHHHHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETC
T ss_pred hhhhhHH-HHHHHHHHHhhcCCCeeeeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCC
Confidence 1111111 1111223334446789999999754311 111 22345556666666554 35799999998764
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.90 E-value=1.5e-22 Score=189.39 Aligned_cols=238 Identities=16% Similarity=0.223 Sum_probs=156.2
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCC
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRD 140 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~ 140 (341)
.+++.|+.||++|||+||||| |+..... ...++. ...++++++++++|+++||+||||||..+..+.. +...
T Consensus 39 ~~~d~~~~lk~~G~n~VRl~v-w~~~~~~-~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~wadp----~~q~ 112 (387)
T d1ur4a_ 39 KKQDIFKTLKEAGVNYVRVRI-WNDPYDA-NGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADP----AKQK 112 (387)
T ss_dssp CBCCHHHHHHHTTCCEEEEEE-CSCCBCT-TCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSS----SCCC
T ss_pred CcccHHHHHHHcCCCEEEeec-ccCCccc-ccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCCCcCC----CCCC
Confidence 456789999999999999999 5432221 122332 2359999999999999999999999986654321 2122
Q ss_pred CccCCc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 141 GFQEWG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP---GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 141 ~~~~w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
....|. ....+...++.+.++++++..+ .+..|||.|||+.. ..+.+.+.+++++++++||+.+|+..|+++
T Consensus 113 ~p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~ 192 (387)
T d1ur4a_ 113 APKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALH 192 (387)
T ss_dssp CCGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CchhhhccchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 233454 3445556666667777766554 46679999999863 246788999999999999999999999887
Q ss_pred C-CCCCCC-hhhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC
Q 019395 213 N-RLGPAD-HKELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 213 ~-~~~~~~-~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~ 288 (341)
. ...... ...+.+.. ...+..++.+|+|..+.. +.+. +.. .+..+.+..++||+|+|++..+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~-----~~~~----~~~----~l~~l~~~~~k~v~v~E~~~~~t 259 (387)
T d1ur4a_ 193 FTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----TLKN----LTS----VLTSVADTYGKKVMVAETSYTYT 259 (387)
T ss_dssp ECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----CHHH----HHH----HHHHHHHHHCCEEEEEEECCCSC
T ss_pred ccCccchHHHHHHHHHHHhcCCCcccccceeecccCc-----cHHH----HHH----HHHHHHHHhCCceEEEEeccccc
Confidence 3 222222 12233321 345779999999976532 1111 111 22223334477899999986542
Q ss_pred CC------------------CCCHHHHHHHHHHHHHHHcc---CCCcEEEec
Q 019395 289 VK------------------DASKQDYQRFANAQLDVYGR---ATFGWAYWA 319 (341)
Q Consensus 289 ~~------------------~~~~~~~~~~~~~~~~~~~~---~~~Gw~~W~ 319 (341)
.. ..+.+....|++...++... .++|++||.
T Consensus 260 ~~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWe 311 (387)
T d1ur4a_ 260 AEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 311 (387)
T ss_dssp SCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred CCCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 11 13455566666666655433 478999994
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.85 E-value=4.6e-21 Score=181.21 Aligned_cols=305 Identities=17% Similarity=0.189 Sum_probs=188.1
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |++.. +.||+++..... +-........+.|. +||+.| ++|+++|+++|+|++|++|.|
T Consensus 8 G~atsa~QvEG~~~~~g~~~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~ll~~lG~~~yRfsi~W 77 (426)
T d1ug6a_ 8 GVATSAYQIEGATQEDGRGPSIWDAFAQR----PGAIRDGSTGEPAC----DHYRRY--EEDIALMQSLGVRAYRFSVAW 77 (426)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTS----TTSSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH
T ss_pred EEEchHHHhcCCcCCCCCCcchhhhhhcC----CCcccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 678999999 88854 688998764321 11111222334454 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+.++++++++++++|+.|.++||.+||+|||+..++.-.+.+ .|. ++..+.|+++.+.++++|
T Consensus 78 sR-I~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hfd~P~~l~~~g-------Gw~~~~~~~~F~~Ya~~v~~~f 149 (426)
T d1ug6a_ 78 PR-ILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERG-------GWRSRETAFAFAEYAEAVARAL 149 (426)
T ss_dssp HH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTT-------GGGSHHHHHHHHHHHHHHHHHH
T ss_pred HH-cccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEecccccchhhhccC-------ccCCHHHHHHHHHHHHHHHHHh
Confidence 64 455544678899999999999999999999999999986543221222 277 889999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-ChH-------HHHHHHHHHHHHHHhcCCCceEEEeC-CC-CCCChh-
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-ALD-------TLKSYYKAGYDAVRKYTSTAYVIMSN-RL-GPADHK- 221 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~~-------~~~~~~~~~~~aIR~~~p~~~v~~~~-~~-~~~~~~- 221 (341)
++.... |-.+|||+. ++. +.. .+......+++++|+..+....++.. .. ...+..
T Consensus 150 gd~V~~--w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (426)
T d1ug6a_ 150 ADRVPF--FATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEA 227 (426)
T ss_dssp TTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCEECSCHHH
T ss_pred Ccccce--EEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCceeEEeccCCCCccchHH
Confidence 998776 559999963 111 111 12223345667788877765444431 11 001100
Q ss_pred -----h-----hhh------cc-------------------CCCCcEEEEeeecCCCCc-----c---------c--cCc
Q 019395 222 -----E-----LLS------FA-------------------SGLSRVVIDVHYYNLFSN-----N---------F--NGL 250 (341)
Q Consensus 222 -----~-----~~~------~~-------------------~~~~~~v~~~H~Y~~~~~-----~---------~--~~~ 250 (341)
. +++ .+ .......+.+.+|.+..- . . +.+
T Consensus 228 ~~~a~~~~~~~f~d~i~~g~yp~~~~~~~~~~~~~~~d~~~ik~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~~~~~t~~ 307 (426)
T d1ug6a_ 228 VDVADRYHNRFFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAM 307 (426)
T ss_dssp HHHHHHHHTHHHHHHHTTSCSCSCCSSSCCCCCCCTTHHHHHTCCCSEEEEEESCCEEEEECCSSSCEEECCCSSCBCTT
T ss_pred HHHHHHHhhhhcchHhhCCcchhHHhhcccCCCcchhHHHHhcCCcCccceeeEEeEEEecCCcccccccccCCCCccCC
Confidence 0 000 00 012346788888864210 0 0 000
Q ss_pred cchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC---------CCCHHHHHHHHHHHHHHHcc--CCCcEEEec
Q 019395 251 NVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK---------DASKQDYQRFANAQLDVYGR--ATFGWAYWA 319 (341)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~ 319 (341)
..+-....+ ...+..+.+..+.||+|+|.|++.... ....+.++.++...+++.++ .-.|+++|+
T Consensus 308 gw~i~P~gl----~~~l~~~~~~y~~Pi~ITENG~~~~~~~~~~~~i~D~~Ri~yl~~~l~~~~~Ai~dGv~V~GY~~WS 383 (426)
T d1ug6a_ 308 GWEVYPEGL----YHLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWS 383 (426)
T ss_dssp CCBCCHHHH----HHHHHHHHHHCSSCEEEEEECCCCCCCCSSCSSBCCHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CCeECccHh----HHHHHHHHHhcCCcEEEeecCCccCCCCCCccccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecC
Confidence 000001111 112333344445679999999875321 01123455667777676654 567999999
Q ss_pred cccCCCCCChHHHHHCCCc
Q 019395 320 HKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 320 ~k~~~~~W~~~~~~~~g~~ 338 (341)
+-. +-+|.......-|++
T Consensus 384 l~D-n~EW~~Gy~~rfGL~ 401 (426)
T d1ug6a_ 384 LMD-NFEWAFGYTRRFGLY 401 (426)
T ss_dssp SBC-CCCGGGGGGSCCCSE
T ss_pred cch-hcChhhcccCcCceE
Confidence 973 355655444445554
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.85 E-value=7.3e-20 Score=167.01 Aligned_cols=232 Identities=16% Similarity=0.181 Sum_probs=156.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.||++|||+|||+| | .+|.++ ...+++++++++.|+++||+|+||+|..+.... .+....+..
T Consensus 30 ~d~~~~lk~~G~n~VRlrv-W---~~p~~g----~~~~~~~~~~~~~a~~~Gm~vll~~hysd~Wad----p~~q~~P~a 97 (334)
T d1foba_ 30 QALETILADAGINSIRQRV-W---VNPSDG----SYDLDYNLELAKRVKAAGMSLYLDLHLSDTWAD----PSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE-C---SCCTTC----TTCHHHHHHHHHHHHHTTCEEEEEECCSSSCCB----TTBCBCCTT
T ss_pred ccHHHHHHHcCCCEEEeee-e---eCCCCC----cCcHHHHHHHHHHHHHCCCEEEEEecCCCcccC----CCcCCCccc
Confidence 5567889999999999998 4 455543 236999999999999999999999998754321 122223344
Q ss_pred Cc----hhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCC--ceEE
Q 019395 145 WG----DSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTST--AYVI 210 (341)
Q Consensus 145 w~----~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~--~~v~ 210 (341)
|. ....+.+.++++.++++|++.. .+..+++.|||+.. ....+.+.++.+.++++||+++|+ ..|+
T Consensus 98 w~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i~ 177 (334)
T d1foba_ 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccccccee
Confidence 65 4667888899999999998875 35669999998752 245568999999999999999854 4455
Q ss_pred EeCCCCCCC--h----hhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEe
Q 019395 211 MSNRLGPAD--H----KELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGE 282 (341)
Q Consensus 211 ~~~~~~~~~--~----~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE 282 (341)
++...+... . ..+.... ...+..++.+|+|+.+... .+ ++.+.. .+..+.++.++||+|.|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~---~~----l~~l~~----~l~~l~~~y~k~v~I~E 246 (334)
T d1foba_ 178 IHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---AT----LASLKT----SLANLQSTYDKPVVVVE 246 (334)
T ss_dssp EEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHHH----HHHHHHHHHCCCEEEEE
T ss_pred eecccCCChhhhHHHHHHHHhcCCCCCCCcCeEEEecCCCCCCc---cc----HHHHHH----HHHHHHHHhCCceEEEE
Confidence 553222111 1 1222211 1224579999999776421 11 222221 23333444577899999
Q ss_pred ecCCCCCC-------------CCCHHHHHHHHHHHHHHHcc--CCCcEEEec
Q 019395 283 WTCEWNVK-------------DASKQDYQRFANAQLDVYGR--ATFGWAYWA 319 (341)
Q Consensus 283 ~g~~~~~~-------------~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~ 319 (341)
+|..+... ..+.+..++|+.+++.+... .++|.|||.
T Consensus 247 t~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWe 298 (334)
T d1foba_ 247 TNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWE 298 (334)
T ss_dssp CCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred ecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeC
Confidence 99764311 14567778888888776543 678999996
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.84 E-value=7.4e-21 Score=180.71 Aligned_cols=183 Identities=17% Similarity=0.180 Sum_probs=134.3
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.. +.||+++..... +-.....-.++.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~atsa~Q~EG~~~~~g~~~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfsi~W 80 (443)
T d2j78a1 11 GVATASYQIEGSPLADGAGMSIWHTFSHT----PGNVKNGDTGDVAC----DHYNRW--KEDIEIIEKLGVKAYRFSISW 80 (443)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS----TTSSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeechHHHhCcCcCCCCCCccHHHHhhcC----CCcccCCCCCCccC----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 678999999 88854 678988753311 11112222333454 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..+ .|.+.+++++++++.++++|+.|+++||.++|+|||+..++.-.+.+| |. +...+.|.++.+.++++|
T Consensus 81 sRi-~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf~~P~wl~~~gG-------w~~~~~v~~F~~Ya~~v~~~~ 152 (443)
T d2j78a1 81 PRI-LPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFALQLKGG-------WANREIADWFAEYSRVLFENF 152 (443)
T ss_dssp HHH-STTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTTG-------GGSTTHHHHHHHHHHHHHHHH
T ss_pred HHc-eeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCccchhhhhhcCC-------ccChHHHHHHHHHHHHHHHHh
Confidence 655 555446889999999999999999999999999999865543222222 76 889999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
++.... |-.+|||.. ++. +. ..+......++++||+..++..|.+
T Consensus 153 gd~V~~--w~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~A~~~~~~~~~~~~vGi 217 (443)
T d2j78a1 153 GDRVKN--WITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGI 217 (443)
T ss_dssp TTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred Cccccc--eEeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHHHHHHhhhcccCCceee
Confidence 997665 559999984 111 11 1233445567788888888655443
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.84 E-value=4.2e-21 Score=182.53 Aligned_cols=184 Identities=17% Similarity=0.249 Sum_probs=133.5
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.. +.||+++..... +-...+.-..+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~atsa~Q~EG~~~~~g~~~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 81 (447)
T d1e4ia_ 12 GTATAAYQIEGAYQEDGRGLSIWDTFAHT----PGKVFNGDNGNVAC----DSYHRY--EEDIRLMKELGIRTYRFSVSW 81 (447)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS----TTTSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeechHHHhCCCcCCCCCccchhhhhhcC----CCcccCCCCCCccc----chhHhh--HHHHHHHHHhCCCEEEccCCH
Confidence 678999999 88854 688888653211 11112222334455 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.. +.|.+.+++++++++.++++|+.|+++||.++|+|||+.-++.-.+.+ .|. ++..+.|.++.+.++++|
T Consensus 82 sR-I~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~dlP~~l~~~g-------Gw~n~~~~~~F~~Ya~~v~~~f 153 (447)
T d1e4ia_ 82 PR-IFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQALQDAG-------GWGNRRTIQAFVQFAETMFREF 153 (447)
T ss_dssp HH-HSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTT-------TTSSTHHHHHHHHHHHHHHHHT
T ss_pred HH-cccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeeccccchhhhcCC-------CCCCHHHHHHHHHHHHHHHHHh
Confidence 64 456555678899999999999999999999999999986543221122 266 789999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
++.... |-++|||.. |+. +. ..+......+++++|+..|+..|.+.
T Consensus 154 gdrV~~--W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi~ 219 (447)
T d1e4ia_ 154 HGKIQH--WLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIA 219 (447)
T ss_dssp BTTBCE--EEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCccce--EEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHHHHHHHHHhhhcceeeee
Confidence 996554 669999974 111 11 12223334567788888887665553
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.83 E-value=1.6e-20 Score=179.33 Aligned_cols=152 Identities=20% Similarity=0.267 Sum_probs=118.7
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|.+||++|. |+|.+ ++||+++..... +-.....-..+.|. +||+.| ++|+++|+++|+|+.|++|.|
T Consensus 11 G~atsa~Q~EG~~~~~gk~~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 80 (464)
T d1gnxa_ 11 GSATASYQIEGAAAEDGRTPSIWDTYART----PGRVRNGDTGDVAT----DHYHRW--REDVALMAELGLGAYRFSLAW 80 (464)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHTS----TTSSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred eeechHHHhccCcCCCCCcccHhhhhhcC----CCcccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 678999999 99864 688888754311 11122233344455 888888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
..+ .|...+++++++++.++++|+.|.++||.+||+|||+..++.-.+.+ .|. ++..+.|+++.+.++++|
T Consensus 81 sRI-~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~HfdlP~~l~~~g-------GW~n~~~v~~F~~YA~~v~~~f 152 (464)
T d1gnxa_ 81 PRI-QPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQELENAG-------GWPERATAERFAEYAAIAADAL 152 (464)
T ss_dssp HHH-SGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTT-------CTTSTHHHHHHHHHHHHHHHHH
T ss_pred HHc-ccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecCccHHHHhhhC-------CCCCHHHHHHHHHHHHHHHHHh
Confidence 655 45434678899999999999999999999999999996554321122 276 889999999999999999
Q ss_pred CCCCceeEEEeecCCC
Q 019395 165 ANRPSLAAIELINEPL 180 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~ 180 (341)
++.... |-++|||+
T Consensus 153 gd~Vk~--W~T~NEP~ 166 (464)
T d1gnxa_ 153 GDRVKT--WTTLNEPW 166 (464)
T ss_dssp TTTCCE--EEEEECHH
T ss_pred ccccce--eEEccCch
Confidence 997666 55999996
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.83 E-value=5.3e-20 Score=174.90 Aligned_cols=184 Identities=16% Similarity=0.201 Sum_probs=134.8
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|+. +.||+++..... +-.....-.++.|. +||+.| ++|++.|+++|+|+.|++|.|
T Consensus 12 G~atsa~Q~EG~~~~~g~g~s~wd~~~~~----~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 81 (449)
T d1qoxa_ 12 GVATAAYQIEGAYNEDGRGMSIWDTFAHT----PGKVKNGDNGNVAC----DSYHRV--EEDVQLLKDLGVKVYRFSISW 81 (449)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHS----TTTSGGGCCTTTTT----CTTSCH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeechHHHhCcCcCCCCCccchhhhhhcC----CCcccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 678999999 88854 678888653311 11111222334454 888888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.+ +.|.+.+.+++++++.++++|+.|+++||.++|+|||+..++--.+.+ .|. ++.++.|.++.+.++++|
T Consensus 82 sR-i~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~d~P~~l~~~g-------Gw~~~~~~~~F~~Ya~~v~~~f 153 (449)
T d1qoxa_ 82 PR-VLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQALQDQG-------GWGSRITIDAFAEYAELMFKEL 153 (449)
T ss_dssp HH-HSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHTTT-------GGGSTHHHHHHHHHHHHHHHHH
T ss_pred HH-cccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecccccchhcccc-------CcCCHHHHHHHHHHHHHHHHHh
Confidence 65 455544578899999999999999999999999999996554322222 277 889999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 165 ANRPSLAAIELINEPLA------------PGV-AL-------DTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
++.... |-.+|||.. |+. +. ..+......+++++|+..++..|.+.
T Consensus 154 gd~V~~--W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi~ 219 (449)
T d1qoxa_ 154 GGKIKQ--WITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIA 219 (449)
T ss_dssp TTTCCE--EEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred cccccc--eEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeeee
Confidence 996655 669999974 111 11 12233344566788888887666553
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.82 E-value=4.2e-19 Score=161.74 Aligned_cols=232 Identities=16% Similarity=0.140 Sum_probs=151.3
Q ss_pred CHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCcc
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQ 143 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~ 143 (341)
+++-++.||++|||+|||++ | .+|..+ ...+++++++++.|+++||+|||++|..++.... +......
T Consensus 29 ~~~~~~~lk~~G~n~VRi~v-W---~~p~~g----~~~~~~~~~~v~~a~~~gl~vil~~h~~~~wa~~----~~~~~p~ 96 (332)
T d1hjsa_ 29 AQPLENILAANGVNTVRQRV-W---VNPADG----NYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADP----AHQTMPA 96 (332)
T ss_dssp BCCHHHHHHHTTCCEEEEEE-C---SSCTTC----TTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBT----TBCBCCT
T ss_pred cccHHHHHHHcCCCEEEeee-e---ecCCCC----ccCHHHHHHHHHHHHHCCCEEEEEecCCccccCc----cccCCCc
Confidence 46788889999999999998 5 455543 2359999999999999999999999998654321 1111223
Q ss_pred CCc---hhHHHHHHHHHHHHHHHhCCCCc-eeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCC--CceEE
Q 019395 144 EWG---DSNVADTVAVIDFLAARYANRPS-LAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKYTS--TAYVI 210 (341)
Q Consensus 144 ~w~---~~~~~~~~~~~~~la~~y~~~~~-v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p--~~~v~ 210 (341)
.|. ....+.+.++++.++++|++... +..+++.|||+.. ....+.+.++++.++++||+.++ ...|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~ 176 (332)
T d1hjsa_ 97 GWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIM 176 (332)
T ss_dssp TCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCccee
Confidence 343 45567788999999999987754 4557899998741 13456889999999999999774 34444
Q ss_pred EeCCCCCCCh-------hhhhhcc--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEE
Q 019395 211 MSNRLGPADH-------KELLSFA--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVG 281 (341)
Q Consensus 211 ~~~~~~~~~~-------~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vG 281 (341)
++...+ ... ..++... ...+..++++|.|..++. ..+.....+. +..+.+..++++++.
T Consensus 177 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~---~~~~~~~~~~--------~~~~~~~~g~~v~i~ 244 (332)
T d1hjsa_ 177 IHLDNG-WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSS---SATLSALKSS--------LDNMAKTWNKEIAVV 244 (332)
T ss_dssp EEESCT-TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCT---TCCHHHHHHH--------HHHHHHHHCCEEEEE
T ss_pred ecccCc-CchhhhhhHHHHHHhcCcccCCccceEeeeecCCCCC---CCCHHHHHHH--------HHHHHHHhCCceEEE
Confidence 442211 121 1222221 122457999999976432 1122222221 112233336789999
Q ss_pred eecCCCC-------------CCCCCHHHHHHHHHHHHHHHcc--CCCcEEEec
Q 019395 282 EWTCEWN-------------VKDASKQDYQRFANAQLDVYGR--ATFGWAYWA 319 (341)
Q Consensus 282 E~g~~~~-------------~~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~ 319 (341)
|+|.... ....+.+...+|++..+....+ .++|.+||.
T Consensus 245 E~~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~ 297 (332)
T d1hjsa_ 245 ETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp ECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred EeccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 9997432 1123566777888887766554 578999994
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.80 E-value=5e-20 Score=175.76 Aligned_cols=154 Identities=17% Similarity=0.223 Sum_probs=117.5
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|++ +.||+++....... -......+.+.|. +||+.| ++|+++|+++|+|+.|++|.|
T Consensus 10 G~atsa~Q~EG~~~~dg~~~s~wd~~~~~~~---~~~~~~~~~~~a~----d~y~ry--~eDi~l~~~lG~~~yRfSi~W 80 (462)
T d1wcga1 10 GTSTASYQIEGGWNEDGKGENIWDRLVHTSP---EVIKDGTNGDIAC----DSYHKY--KEDVAIIKDLNLKFYRFSISW 80 (462)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHCG---GGSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eEEchHHHhcCCcCCCCCcccHHHHhhhcCC---CcccCCCCCCccc----chhhhh--HHHHHHHHHhCCCEEEeeCcH
Confidence 678999999 88854 68888865321100 0011222333454 788888 999999999999999999999
Q ss_pred ccccCCCC-CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP-PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 86 ~~~~~~~~-~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
..++ |.. .+.+++++++.++++|+.|+++||.++|+|||+..++.-.+.+ .|. ++.++.|.++.+.++++
T Consensus 81 sRI~-P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hfd~P~~l~~~G-------GW~~~~~v~~F~~Ya~~v~~~ 152 (462)
T d1wcga1 81 ARIA-PSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQYLQDLG-------GWVNPIMSDYFKEYARVLFTY 152 (462)
T ss_dssp HHHS-TTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHTT-------GGGSTTHHHHHHHHHHHHHHH
T ss_pred HHcc-cCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccccchhhhhhcC-------CcccHHHHHHHHHHHHHHHHh
Confidence 6554 543 3578899999999999999999999999999996553222222 277 89999999999999999
Q ss_pred hCCCCceeEEEeecCCCC
Q 019395 164 YANRPSLAAIELINEPLA 181 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~~ 181 (341)
|++.... |-++|||..
T Consensus 153 fgd~V~~--W~T~NEP~~ 168 (462)
T d1wcga1 153 FGDRVKW--WITFNEPIA 168 (462)
T ss_dssp HTTTCCE--EEEEECHHH
T ss_pred ccccchh--eeeecCCce
Confidence 9997665 559999973
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.80 E-value=1.1e-19 Score=173.67 Aligned_cols=178 Identities=16% Similarity=0.220 Sum_probs=130.7
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |+|.. +.||+++.+..... ....+.|. +||+.| ++|+++|+++|+|+.|++|+|
T Consensus 12 G~atsa~QiEG~~~~~gkg~s~wd~~~~~~~--------~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSisW 77 (468)
T d1pbga_ 12 GGATAAYQAEGATHTDGKGPVAWDKYLEDNY--------WYTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW 77 (468)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHTTC--------SCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeEChHHHhcCCcCCCCCccchhheeeccCC--------CCCCCccC----chhhhh--HHHHHHHHHhCCCEEEccCCH
Confidence 678999999 99854 67888886532110 11233444 788888 999999999999999999999
Q ss_pred ccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHh
Q 019395 86 WIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARY 164 (341)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y 164 (341)
.++ .|.+.++++++++++++++|+.|.++||.++|+|||+..++.-.+.+ .|. ++.++.|+++.+.++++|
T Consensus 78 sRI-~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~dlP~~l~~~G-------Gw~~~~~v~~F~~Ya~~~~~~f 149 (468)
T d1pbga_ 78 SRI-FPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSNG-------DFLNRENIEHFIDYAAFCFEEF 149 (468)
T ss_dssp HHH-STTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCBHHHHHTT-------GGGSTHHHHHHHHHHHHHHHHC
T ss_pred HHc-CcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecccchhhHhhcC-------ccCCHHHHHHHHHHHHHHHHhc
Confidence 654 45544678999999999999999999999999999996553221221 277 899999999999999999
Q ss_pred CCCCceeEEEeecCCCC------------CCC--ChH-------HHHHHHHHHHHHHHhcCCCceEEE
Q 019395 165 ANRPSLAAIELINEPLA------------PGV--ALD-------TLKSYYKAGYDAVRKYTSTAYVIM 211 (341)
Q Consensus 165 ~~~~~v~~~el~NEP~~------------~~~--~~~-------~~~~~~~~~~~aIR~~~p~~~v~~ 211 (341)
++. . -|-.+|||+. |+. ... .+...-..+++++|+..++..|.+
T Consensus 150 gdv-k--~W~T~NEP~~~~~~gy~~G~~~P~~~~~~~~~~~~~hn~l~AHa~a~~~~~~~~~~~~ig~ 214 (468)
T d1pbga_ 150 PEV-N--YWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGV 214 (468)
T ss_dssp TTC-C--EEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEEEE
T ss_pred CCc-e--EEEEecCccccccccccccccCCccccchhhHHHhhhhHHHHHHHHHHHHHhhccccccce
Confidence 753 3 3779999984 111 111 122233466777888887755444
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.80 E-value=1e-19 Score=174.28 Aligned_cols=312 Identities=14% Similarity=0.171 Sum_probs=186.4
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhh-cC---cchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNG-FG---PDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRI 81 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~-~g---~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRl 81 (341)
|.+||++|. |++.+ +.+|+++... ..+-..... .+ ++.+. +||+.| ++|++.||++|+|+.|+
T Consensus 11 G~Atsa~QiEG~~~~~~~~~s~wd~~~----~~~~~~~~~~~~~d~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRf 80 (489)
T d1uwsa_ 11 GWSQAGFQSEMGTPGSEDPNTDWYKWV----HDPENMAAGLVSGDLPENGP----GYWGNY--KTFHDNAQKMGLKIARL 80 (489)
T ss_dssp EEECCHHHHSCSSTTCCCCCBHHHHHH----HCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEE
T ss_pred eEEchHHHhccCCCCCCCCCcchhhhh----ccCCcccCCCCCCCccccch----hHHHhH--HHHHHHHHHcCCCEEEe
Confidence 678999999 88743 5677665432 111111111 11 11222 578778 99999999999999999
Q ss_pred CcccccccCCCC---------------------------CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCC
Q 019395 82 PVGWWIANDPTP---------------------------PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNE 134 (341)
Q Consensus 82 pi~~~~~~~~~~---------------------------~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~ 134 (341)
+|+|..++ |.+ .+.++++++++++++|+.|.++||.++|+|||+.-++...+
T Consensus 81 SI~WsRI~-P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~l~~~GIeP~VTL~H~dlP~~L~d 159 (489)
T d1uwsa_ 81 NVEWSRIF-PNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHWPLPLWLHD 159 (489)
T ss_dssp ECCHHHHC-CSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCSSCCBTTTBC
T ss_pred cccHHhcC-cCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCccEEEEcCCCCcHHHHh
Confidence 99996554 432 13567889999999999999999999999999976654322
Q ss_pred C----CCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------------CC-CCh-------H
Q 019395 135 H----SATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------------PG-VAL-------D 187 (341)
Q Consensus 135 ~----~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------------~~-~~~-------~ 187 (341)
. .+.-.....|. ++.++.|+++.+.++++|++.... |-.+|||+. ++ .+. .
T Consensus 160 ~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~~~~~gy~g~~~~~pp~~~~~~~~~~~~h 237 (489)
T d1uwsa_ 160 PIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDDLVDE--YSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRRAMY 237 (489)
T ss_dssp HHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTTTCSE--EEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHH
T ss_pred hhhccccccccCCCcCCHHHHHHHHHHHHHHHHHhcCcceE--EEeeCCCcEEeecccccccCCCCcccCCHHHHHHHHH
Confidence 0 00000123387 899999999999999999997766 559999963 11 111 1
Q ss_pred HHHHHHHHHHHHHHhcCCCce-EEEeC----CCCCCChhh-----------hhh------cc----------CCCCcEEE
Q 019395 188 TLKSYYKAGYDAVRKYTSTAY-VIMSN----RLGPADHKE-----------LLS------FA----------SGLSRVVI 235 (341)
Q Consensus 188 ~~~~~~~~~~~aIR~~~p~~~-v~~~~----~~~~~~~~~-----------~~~------~~----------~~~~~~v~ 235 (341)
.+......+++++|+..+..+ +++.. .....+... +++ ++ .......+
T Consensus 238 n~l~Aha~a~~~~~~~~~~~igi~~~~~~~~p~~~~d~~a~~~~~~~~~~~f~d~~~~G~yp~~~~~~~~~~l~~~~Dfi 317 (489)
T d1uwsa_ 238 NIIQAHARAYDGIKSVSKKPVGIIYANSSFQPLTDKDMEAVEMAENDNRWWFFDAIIRGEITRGNEKIVRDDLKGRLDWI 317 (489)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEEEEEEEEESSTTCHHHHHHHHHHHTHHHHHHHHHCEEC----CEECTTTTTCCSEE
T ss_pred HHHHHHHHHHHHHHhhccCcceeEEeccchhhcchhHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhhhhccccCccCcc
Confidence 233344566677888776544 33221 111111100 000 00 01223455
Q ss_pred EeeecCCCCc-----c----------c----------cCccchh--hhHHHHhhhhhhhhhhhccCCCceEEEeecCCCC
Q 019395 236 DVHYYNLFSN-----N----------F----------NGLNVQQ--NIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWN 288 (341)
Q Consensus 236 ~~H~Y~~~~~-----~----------~----------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~ 288 (341)
.+-+|...-. . . ..+...+ ..+.+ ...+..+.+..++||+|+|.|++..
T Consensus 318 GiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl----~~~L~~~~~rY~~PI~ITENG~~~~ 393 (489)
T d1uwsa_ 318 GVNYYTRTVVKRTEKGYVSLGGYGHGCERNSVSLAGLPTSDFGWEFFPEGL----YDVLTKYWNRYHLYMYVTENGIADD 393 (489)
T ss_dssp EEEEEEEEEEEECSSSEEECTTSTTSSCSSSBCTTSCBBCTTCCBCCTHHH----HHHHHHHHHHHCCCEEEEECCCCCT
T ss_pred eecccchhhcccCCCcccccCccCcccccccccCCCCCcCcCCCccCchhh----hHHHHHHhhccCCCEEEecCCCCCC
Confidence 5555532100 0 0 0000000 01111 1122333333467899999999765
Q ss_pred CCCCCHHHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 289 VKDASKQDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
.+....+.++++++....+.++ .-.|+++|++-. +-+|.......-|++
T Consensus 394 ~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~ 444 (489)
T d1uwsa_ 394 ADYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLAD-NYEWASGFSMRFGLL 444 (489)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHTTCCEEEEEESCSBC-CCCGGGGGGSCCCSE
T ss_pred CcchHHHHHHHHHHHHHHHHHcCCCEEEEeeccchh-hhChhhhhhccCceE
Confidence 4444456778888888888775 567999999963 355555444445554
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.79 E-value=4.9e-19 Score=169.14 Aligned_cols=318 Identities=14% Similarity=0.203 Sum_probs=184.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||++|. |++.. +.+|.++..........-....+-.++.+. +||+.| ++|++.|+++|+|+.|++|+|
T Consensus 10 G~Atsa~QiEG~~~~~g~~~s~wd~~~~~~~~~~~~~~~gd~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 83 (481)
T d1qvba_ 10 GYSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGP----GYWNLN--QNDHDLAEKLGVNTIRVGVEW 83 (481)
T ss_dssp EEECCHHHHSCCSTTCCCTTBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eEechHHHhcCCcCCCCCCCcceeeeeccCCcccCCCcCCCCccccc----chhhcc--HHHHHHHHHcCCCEEEccCcH
Confidence 678999998 87743 577776543210000000000111122222 688888 999999999999999999999
Q ss_pred ccccCCCCCC-----------------------------CcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 86 WIANDPTPPK-----------------------------PFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 86 ~~~~~~~~~~-----------------------------~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
..++ |.+.. ..+++++++++++|+.|.++||.++|+|||+.-++.-.+..
T Consensus 84 sRi~-P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~i~~l~~~GI~P~VTL~H~dlP~~L~d~~ 162 (481)
T d1qvba_ 84 SRIF-PKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPLWLHNPI 162 (481)
T ss_dssp HHHC-SSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCBTTTBCHH
T ss_pred HhcC-cCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHHHHHHHHhCCeeEEEEecCCCcHHHhhhh
Confidence 7555 33211 13678999999999999999999999999997665432200
Q ss_pred -----CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC--------------CCC-Ch-------HH
Q 019395 137 -----ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA--------------PGV-AL-------DT 188 (341)
Q Consensus 137 -----g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~--------------~~~-~~-------~~ 188 (341)
|.......|. ++.++.|+++.+.++++|+++... |-++|||.. ++. +. ..
T Consensus 163 ~~~~~g~~~~~GGW~n~~~v~~F~~YA~~v~~~fgdrVk~--WiTiNEP~~~~~~gy~~~~G~~~Pg~~~~~~~~~a~~~ 240 (481)
T d1qvba_ 163 MVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGELPVM--WSTMNEPNVVYEQGYMFVKGGFPPGYLSLEAADKARRN 240 (481)
T ss_dssp HHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTTSCSE--EEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHHHHHHH
T ss_pred hcccccccccCCCccCHHHHHHHHHHHHHHHHHhcchhhe--eEecCCCcEEEeeccccccccCCCCccchhhHhHHHHH
Confidence 0000112387 899999999999999999997665 559999963 111 11 12
Q ss_pred HHHHHHHHHHHHHhcCCCce-EEEeCCC-----CCCCh-hh--------hhhc--------------cCCCCcEEEEeee
Q 019395 189 LKSYYKAGYDAVRKYTSTAY-VIMSNRL-----GPADH-KE--------LLSF--------------ASGLSRVVIDVHY 239 (341)
Q Consensus 189 ~~~~~~~~~~aIR~~~p~~~-v~~~~~~-----~~~~~-~~--------~~~~--------------~~~~~~~v~~~H~ 239 (341)
+......++++||+..+..+ +++...+ ...+. .. +.+. ........+.+-+
T Consensus 241 ~l~AHa~A~~~~~~~~~~~igi~~~~~~~~~~~~~~~~~~~~~~~~~~~f~d~~~~g~~~~~~~~~~~i~~~~DfiGiNy 320 (481)
T d1qvba_ 241 MIQAHARAYDNIKRFSKKPVGLIYAFQWFELLEGPAEVFDKFKSSKLYYFTDIVSKGSSIINVEYRRDLANRLDWLGVNY 320 (481)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEEEECCEEECSSSCCSHHHHHHHHHTSTTTTHHHHSCCSSCCCCCTTTSSCCSEEEEEC
T ss_pred HHHHHHHHHHHHhhcccCccceEEecccccccCCcHHHHHHHHHHhcccccchhhcCCcccCHHHHHHhhccCCcccccc
Confidence 33344456677888776542 2222211 11110 00 0000 0111235677776
Q ss_pred cCCCCc----c--c--cC-----------------ccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCH
Q 019395 240 YNLFSN----N--F--NG-----------------LNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASK 294 (341)
Q Consensus 240 Y~~~~~----~--~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~ 294 (341)
|...-. . . .. ....+.+. -......+..+.+..++|++|+|.|++...+....
T Consensus 321 Yt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~--P~Gl~~~L~~~~~~Y~~Pi~ITENG~~~~~D~~Ri 398 (481)
T d1qvba_ 321 YSRLVYKIVDDKPIILHGYGFLCTPGGISPAENPCSDFGWEVY--PEGLYLLLKELYNRYGVDLIVTENGVSDSRDALRP 398 (481)
T ss_dssp CCEEEEECCTTCCEECTTSGGGSCTTCBCTTSCBBCTTCCBCC--THHHHHHHHHHHHHHCCEEEEEECCCCCTTCSSHH
T ss_pred ccceEEeccCCCccccccccccccCCCcCCCCCCCCccccccC--cHHHHHHHHHHHHhcCCCEEEECCCCCcccChHHH
Confidence 642100 0 0 00 00000000 00011123333344467899999998754344445
Q ss_pred HHHHHHHHHHHHHHcc--CCCcEEEeccccCCCCCChHHHHHCCCc
Q 019395 295 QDYQRFANAQLDVYGR--ATFGWAYWAHKCEANHWSLKWMIENGYI 338 (341)
Q Consensus 295 ~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~~~~~W~~~~~~~~g~~ 338 (341)
+.+++++.+...+.++ ...|+++|++-. +-+|.......-|++
T Consensus 399 ~yl~~hL~~~~~Ai~dGv~V~GY~~WSl~D-n~EW~~Gy~~RfGL~ 443 (481)
T d1qvba_ 399 AYLVSHVYSVWKAANEGIPVKGYLHWSLTD-NYEWAQGFRQKFGLV 443 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEECSBC-CCCGGGTTSSCCCSE
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEeeccchh-hhChhhcccccCceE
Confidence 6778888888888776 678999999963 355554444444543
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.78 E-value=4.8e-20 Score=176.80 Aligned_cols=154 Identities=16% Similarity=0.237 Sum_probs=116.3
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|..||+.|. |+|+. +.||+++....... -........+.|. +||+.| ++|+++||++|+|+.|++|+|
T Consensus 20 G~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~---~~~~~~~~~~~a~----d~y~ry--~eDi~l~~~lG~~~yRfSisW 90 (484)
T d1v02a_ 20 GAATSAYQIEGAWNEDGKGPSTWDHFCHNFP---EWIVDRSNGDVAA----DSYHMY--AEDVRLLKEMGMDAYRFSISW 90 (484)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHCG---GGSTTSCCSSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred eEEchHHHhCcCcCCCCCCccHHHHhhccCC---CcccCCCCCCccc----chhhhh--HHHHHHHHHhCCCEEEccCCH
Confidence 678999999 98854 78888875321000 0011222233454 788888 999999999999999999999
Q ss_pred ccccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
..++ |.. .+++++++++.++++|+.|+++||.+||+|||+.-++.-.+. ...|. ++.++.|+++.+.+++
T Consensus 91 sRI~-P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hfd~P~~l~~~------~Ggw~n~~~~~~F~~Ya~~v~~ 163 (484)
T d1v02a_ 91 PRIL-PKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQALVDA------YGGFLDERIIKDYTDFAKVCFE 163 (484)
T ss_dssp HHHS-TTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHH
T ss_pred HHcC-CCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCCcccceeeee------cCcccCHHHHHHHHHhhHHHHH
Confidence 7554 442 357889999999999999999999999999999654321110 12266 7899999999999999
Q ss_pred HhCCCCceeEEEeecCCC
Q 019395 163 RYANRPSLAAIELINEPL 180 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~ 180 (341)
+|++.... |-.+|||+
T Consensus 164 ~fgd~V~~--W~T~NEP~ 179 (484)
T d1v02a_ 164 KFGKTVKN--WLTFNEPE 179 (484)
T ss_dssp HHTTTCCE--EEEEECHH
T ss_pred Hhcchhhc--eEEecCcc
Confidence 99997766 55999996
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.77 E-value=3.7e-19 Score=170.85 Aligned_cols=154 Identities=16% Similarity=0.189 Sum_probs=115.9
Q ss_pred ceeeeccCC-CCccc--CCcccccccccCCcchhhhhhhhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCccc
Q 019395 9 TRLTADYGS-SSWDD--SDPSVFKLNIVSTLRGEYQITNGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGW 85 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~--~~p~~f~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~ 85 (341)
|.+||++|. |+|.. +.||+++......+ -......+.+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 26 G~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~---~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 96 (490)
T d1cbga_ 26 GTASSAFQYEGAAFEDGKGPSIWDTFTHKYP---EKIKDRTNGDVAI----DEYHRY--KEDIGIMKDMNLDAYRFSISW 96 (490)
T ss_dssp EEECCHHHHCCCSSSTTCCCBHHHHHHHHCG---GGSTTCCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeEChHHHhcCCcCCCCCccchhhhhhccCC---cccCCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 678999999 88854 68888875421100 0111222333455 888888 999999999999999999999
Q ss_pred ccccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHH
Q 019395 86 WIANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAA 162 (341)
Q Consensus 86 ~~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~ 162 (341)
..+ .|.. .+++++++++.++++|+.|+++||.+||+|||+.-++.-.+. ...|. ++..+.|+++.+.+++
T Consensus 97 sRI-~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~HfdlP~~l~~~------~Ggw~n~~~~~~F~~Ya~~v~~ 169 (490)
T d1cbga_ 97 PRV-LPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVPQALEDE------YRGFLGRNIVDDFRDYAELCFK 169 (490)
T ss_dssp HHH-STTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTTHHHHHHHHHHHHHH
T ss_pred HHc-CCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecCCChHHHhhc------ccccCCHHHHHHHHHHHHHHHH
Confidence 655 4542 357889999999999999999999999999998644321111 11255 7899999999999999
Q ss_pred HhCCCCceeEEEeecCCC
Q 019395 163 RYANRPSLAAIELINEPL 180 (341)
Q Consensus 163 ~y~~~~~v~~~el~NEP~ 180 (341)
+|++.... |-++|||.
T Consensus 170 ~fgd~V~~--W~T~NEP~ 185 (490)
T d1cbga_ 170 EFGDRVKH--WITLNEPW 185 (490)
T ss_dssp HHTTTCCE--EEEEECHH
T ss_pred HhcCccce--EEEccCCc
Confidence 99997666 55999986
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.69 E-value=6.7e-17 Score=151.95 Aligned_cols=111 Identities=21% Similarity=0.343 Sum_probs=91.2
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCC
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHS 136 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~ 136 (341)
+||+.| ++|+++|+++|+|+.|++|+|..+ .|.+ +++++++++.++++|+.++++||.+||+|||+.-++.-.+.
T Consensus 47 d~y~ry--~eDi~ll~~lG~~~yRfSisWsRI-~P~~-g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~d~P~~l~~~- 121 (423)
T d1vffa1 47 NHWELY--RDDIQLMTSLGYNAYRFSIEWSRL-FPEE-NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLWFMKK- 121 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCHHHH-CSBT-TBCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHT-
T ss_pred chHHhh--HHHHHHHHHhCCCEEEecCcHHHe-ecCC-CccChHHHHHHHHHHHHHHhcCCeeEEeecCCcchHHHHhh-
Confidence 788888 999999999999999999999654 4554 58889999999999999999999999999998654322111
Q ss_pred CCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 137 ATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 137 g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
..|. ++..+.|.++.+.+++++ ++ |-.|-++|||..
T Consensus 122 ------gGw~~~~~v~~F~~Ya~~~~~~~-d~--Vk~W~T~NEP~~ 158 (423)
T d1vffa1 122 ------GGFLREENLKHWEKYIEKVAELL-EK--VKLVATFNEPMV 158 (423)
T ss_dssp ------TGGGSGGGHHHHHHHHHHHHHHT-TT--CCEEEEEECHHH
T ss_pred ------hhccCHHHHHHHHHHHHHHHHhh-cc--cceeeccCCcce
Confidence 1266 789999999999988766 54 444779999984
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.69 E-value=1.6e-16 Score=144.50 Aligned_cols=253 Identities=12% Similarity=0.110 Sum_probs=147.1
Q ss_pred HHHHHHH-HHCCCCEEEcCcccccccCC----CCC----CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCC
Q 019395 65 DEDFKFL-SSNGINAVRIPVGWWIANDP----TPP----KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEH 135 (341)
Q Consensus 65 e~d~~~i-~~~G~N~VRlpi~~~~~~~~----~~~----~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~ 135 (341)
.+++..+ +++|++.||++-.+...... ... ..| .+..+|++|+.|.++||++++.|...|.....-..
T Consensus 23 ~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~y---d~~~~D~~~~~~~~~g~~~~~~l~~~p~~~~~~~~ 99 (346)
T d1uhva2 23 IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFY---NFTYIDRIFDSFLEIGIRPFVEIGFMPKKLASGTQ 99 (346)
T ss_dssp HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEE---CCHHHHHHHHHHHHHTCEECEEECCCCTTTBSSCC
T ss_pred HHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCccc---ChHhHHHHHHHHHHcCCCeEEEEeccCccccCCCC
Confidence 4455554 67999999986432111100 000 112 26889999999999999999999987754322111
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCC-----CceeEEEeecCCCCC----CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANR-----PSLAAIELINEPLAP----GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~-----~~v~~~el~NEP~~~----~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
...........+...+.+.++++.+++||+++ +.+..||+.|||... ..+.+++.+++++++++||+++|+
T Consensus 100 ~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~~~~~~~aik~~~P~ 179 (346)
T d1uhva2 100 TVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKLYKVTAKAIKEVNEN 179 (346)
T ss_dssp EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHHHHHHHHHHHHHCTT
T ss_pred CcccccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHHHHHHHHHHhccCCC
Confidence 00000000011466788999999999998763 457789999999853 245678999999999999999999
Q ss_pred ceEEEeCCCCCCC--hhhhhhcc--CCCCcEEEEeeecCCCCccccC-------ccchhhhHHHHhhhhhhhhhhhccCC
Q 019395 207 AYVIMSNRLGPAD--HKELLSFA--SGLSRVVIDVHYYNLFSNNFNG-------LNVQQNIDYVNNQRASDLGAVTTSNG 275 (341)
Q Consensus 207 ~~v~~~~~~~~~~--~~~~~~~~--~~~~~~v~~~H~Y~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
..|+..+...... ...++... ......++++|.|......... ...+.....+. .....+.. ....+
T Consensus 180 ~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~ 257 (346)
T d1uhva2 180 LKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFK-TVREIIKN-SHFPN 257 (346)
T ss_dssp SCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHHH-HHHHHHHT-SSCTT
T ss_pred ceEeeccccCCccccHHHHHHHHHhcCCcccceeeecCCCCCCcCCccchhhhhhhhhhHHHHHH-HHHHHHHh-cCCCC
Confidence 8887653222111 22332221 2335668999999643221111 01111111111 11111111 11235
Q ss_pred CceEEEeecCCCCCCCC--CHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 276 PLTFVGEWTCEWNVKDA--SKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 276 ~pv~vGE~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
.|++++|||........ ......+|+...+........+.++|++..
T Consensus 258 ~pi~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d 306 (346)
T d1uhva2 258 LPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 306 (346)
T ss_dssp CCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred ccceeccccCCCCCCCCcccHHHHHHHHHHHHHHhcccccEEEEEEeec
Confidence 68999999976532211 122334555555544444667888998864
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=6.2e-15 Score=131.83 Aligned_cols=213 Identities=16% Similarity=0.195 Sum_probs=134.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+... + ..+ .+++.|.++||.|+.++...... ...
T Consensus 39 ~~d~~~~k~~G~N~iR~~~~------~-----~~~-------~~~~~cD~~Gilv~~e~~~~~~~------------~~~ 88 (304)
T d1bhga3 39 VKDFNLLRWLGANAFRTSHY------P-----YAE-------EVMQMCDRYGIVVIDECPGVGLA------------LPQ 88 (304)
T ss_dssp HHHHHHHHHHTCCEEECTTS------C-----CSS-------THHHHHSTTCCEEEECCSCCCTT------------SSG
T ss_pred HHHHHHHHHcCCCEEEecCC------C-----ChH-------HHHHHHHhcCCeeeecccccccc------------ccc
Confidence 88999999999999998421 1 111 46789999999999998754211 011
Q ss_pred Cc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCCCChhhh
Q 019395 145 WG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGPADHKEL 223 (341)
Q Consensus 145 w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~~~~~~ 223 (341)
.. +...+.+.+.++.++++++++|.|++|++.|||.. .......+.+++++.||+.||+++|...+...... ...
T Consensus 89 ~~~~~~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~---~~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~~-~~~ 164 (304)
T d1bhga3 89 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAA-DKG 164 (304)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCT---TSHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTTT-CSS
T ss_pred ccchHHHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCc---ccchhhhhhHHHHHHHHhhCCCCceeeeccccccc-ccc
Confidence 11 56778899999999999999999999999999975 34567788999999999999999998875433211 111
Q ss_pred hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-------CCCHHH
Q 019395 224 LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK-------DASKQD 296 (341)
Q Consensus 224 ~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~-------~~~~~~ 296 (341)
.....+++.|.|..+...... .+............+.+...+|++++|+|+..... ..+.+.
T Consensus 165 -----~~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~p~~~~e~g~~~~~~~~~~~~~~~~e~~ 233 (304)
T d1bhga3 165 -----APYVDVICLNSYYSWYHDYGH------LELIQLQLATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEY 233 (304)
T ss_dssp -----GGGCSSEEEECCTTSSSSTTC------HHHHHHHHHHHHHHHHHHSCSCEEEEECCCCCCTTCCCSSCCSSCHHH
T ss_pred -----ccccccccccccccccccccc------hhhhhhhhhHHHHHhhccCCCCeEEecchhhcccccCCCcccccCHHH
Confidence 112235777777543211111 11111111111222334456789999999753211 112333
Q ss_pred HHHHHHHHHHHH---cc-CCCcEEEecccc
Q 019395 297 YQRFANAQLDVY---GR-ATFGWAYWAHKC 322 (341)
Q Consensus 297 ~~~~~~~~~~~~---~~-~~~Gw~~W~~k~ 322 (341)
...+++.....+ .. ..+|-++|++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~G~~~w~~~D 263 (304)
T d1bhga3 234 QKSLLEQYHLGLDQKRRKYVVGELIWNFAD 263 (304)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEESBC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeeeEe
Confidence 333333322222 22 467889999874
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.60 E-value=2e-16 Score=151.80 Aligned_cols=153 Identities=11% Similarity=0.099 Sum_probs=113.7
Q ss_pred ceeeeccCC-CCcccCCcccccccccCCcchhhhhh-hhcCcchHHHHHHHHHhhccCHHHHHHHHHCCCCEEEcCcccc
Q 019395 9 TRLTADYGS-SSWDDSDPSVFKLNIVSTLRGEYQIT-NGFGPDKAPQVLQDHWDSYITDEDFKFLSSNGINAVRIPVGWW 86 (341)
Q Consensus 9 ~~~~~~~~~-~~~~~~~p~~f~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~e~d~~~i~~~G~N~VRlpi~~~ 86 (341)
|..||++|. |+| .+.||+++...... .-... ..-..+.|. +||+.| ++|+++||++|+|+.|++|.|.
T Consensus 30 G~atsa~Q~EG~~-gkg~s~wd~~~~~~---~~~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSI~Ws 99 (499)
T d1e4mm_ 30 GVASSAYQIEGTI-GRGLNIWDGFTHRY---PNKSGPDHGNGDTTC----DSFSYW--QKDIDVLDELNATGYRFSIAWS 99 (499)
T ss_dssp EEECCHHHHSCST-TSCCBHHHHHHHHS---HHHHCTTCCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCHH
T ss_pred eeechHHHhCCCC-CCCccHHhHHhhhc---CCccCCCCCCCCccc----chHHHH--HHHHHHHHHhCCCEEEccCCHH
Confidence 678999999 887 45778776432000 00000 111123344 788888 9999999999999999999996
Q ss_pred cccCCCC--CCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHH
Q 019395 87 IANDPTP--PKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAAR 163 (341)
Q Consensus 87 ~~~~~~~--~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~ 163 (341)
+++ |.. .++++++++++++++|+.|.++||.++|+|||+..++.-.+. ...|. ++..+.|+++.+.++++
T Consensus 100 RI~-P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~HfdlP~~l~~~------~GGW~~~~~~~~F~~YA~~v~~~ 172 (499)
T d1e4mm_ 100 RII-PRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLPQTLQDE------YEGFLDPQIIDDFKDYADLCFEE 172 (499)
T ss_dssp HHC-TTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSCCBHHHHHH------HCGGGSTHHHHHHHHHHHHHHHH
T ss_pred HcC-cCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecCchHHHHHHh------cccccCHHHHHHHHHHHHHHHHh
Confidence 554 543 245789999999999999999999999999999654321111 12377 89999999999999999
Q ss_pred hCCCCceeEEEeecCCC
Q 019395 164 YANRPSLAAIELINEPL 180 (341)
Q Consensus 164 y~~~~~v~~~el~NEP~ 180 (341)
|++.... |-.+|||+
T Consensus 173 fgd~Vk~--W~T~NEP~ 187 (499)
T d1e4mm_ 173 FGDSVKY--WLTINQLY 187 (499)
T ss_dssp HTTTCCE--EEEESCTT
T ss_pred hccccce--eEEccCce
Confidence 9997766 55999998
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.36 E-value=1.9e-12 Score=117.29 Aligned_cols=121 Identities=21% Similarity=0.290 Sum_probs=89.4
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEcCc-ccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCC----
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRIPV-GWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQN---- 131 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRlpi-~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~---- 131 (341)
+||+...-++||+.||++|+|+||+++ .|. .+.|.+ +.++ ++.+|++|+.|+++||+|||+|++...++.
T Consensus 9 ~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~-~iep~~-G~~~---~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~~~ 83 (393)
T d1kwga2 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWA-LLEPEP-GRLE---WGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDR 83 (393)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHH-HHCSBT-TBCC---CHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEecccchh-hcCCCC-CccC---HHHHHHHHHHHHHCCCEEEEEcCCCCCchhhhcc
Confidence 345332229999999999999999998 674 556665 3564 789999999999999999999998743210
Q ss_pred -----CCCCCCCCC-----CccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 019395 132 -----GNEHSATRD-----GFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 182 (341)
Q Consensus 132 -----~~~~~g~~~-----~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~ 182 (341)
..+..|... ....+. +...+.+.++++.++.+|++++.+..+++.|||...
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 84 YPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp CGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred CcccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 001111110 011122 788889999999999999999999999999999863
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.36 E-value=4.5e-12 Score=115.92 Aligned_cols=143 Identities=18% Similarity=0.158 Sum_probs=98.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+++|+.||++|+|+||+.+.| ...+|.+ +.|+-+.+..|+++|+.|.++||+|||.+....... +..+ +.+.
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~W-~~~ep~~-g~~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~---w~~~---~~p~ 110 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVDW-ALLEGNP-GHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAE---VSGG---GFPG 110 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECCH-HHHCSBT-TBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTT---BGGG---GCCG
T ss_pred HHHHHHHHHcCCCEEEEecch-hccCCCC-CcccccchhhHHHHHHHHHHcCCEEEEcCCCCcCcc---cccC---CCCc
Confidence 889999999999999999985 5677766 477777888999999999999999999876432110 0000 1111
Q ss_pred Cc-----------hhHHHHHHHHHHHHHHH-----hCCCCceeEEEeecCCCCCC--CChHHHHHHHHHHHHHHHhcCCC
Q 019395 145 WG-----------DSNVADTVAVIDFLAAR-----YANRPSLAAIELINEPLAPG--VALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 145 w~-----------~~~~~~~~~~~~~la~~-----y~~~~~v~~~el~NEP~~~~--~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
|. +...+...++++.++++ |++++.|++|+|-||..... ......+.+.+.+.+..|+.+..
T Consensus 111 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (354)
T d1tg7a5 111 WLQRVDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIV 190 (354)
T ss_dssp GGGGCSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcc
Confidence 11 34555556666666554 68889999999999986421 11122345666667777777877
Q ss_pred ceEEEeCCC
Q 019395 207 AYVIMSNRL 215 (341)
Q Consensus 207 ~~v~~~~~~ 215 (341)
.++...+.+
T Consensus 191 ~p~~~~~~~ 199 (354)
T d1tg7a5 191 VPFISNDAW 199 (354)
T ss_dssp SCBBCCBSS
T ss_pred cceEeccch
Confidence 766655443
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=99.25 E-value=3.7e-10 Score=100.66 Aligned_cols=207 Identities=14% Similarity=0.169 Sum_probs=126.8
Q ss_pred CCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE---ecCC-CCCCCCCCCCCCCCCCccCCc-hh
Q 019395 76 INAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHA-APGSQNGNEHSATRDGFQEWG-DS 148 (341)
Q Consensus 76 ~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil---dlh~-~~g~~~~~~~~g~~~~~~~w~-~~ 148 (341)
||.+-.. +.| ..++|.++ .++ ++.+|++|++|+++||+|.- =.|. .|. ....+. +.
T Consensus 37 fn~~t~~n~~kW-~~~ep~~G-~~~---~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~------------w~~~~~~~~ 99 (302)
T d1nq6a_ 37 FGSVTPENEMKW-DAVESSRN-SFS---FSAADRIVSHAQSKGMKVRGHTLVWHSQLPG------------WVSPLAATD 99 (302)
T ss_dssp CSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEEEEEEESTTCCT------------TTTTSCHHH
T ss_pred CCeeeeccCccc-hhhcCCCC-cCC---cHHHHHHHHHHHHCCCEEEeecccccccccc------------cccccchHH
Confidence 8888875 445 45566654 453 78999999999999999852 1221 111 111133 56
Q ss_pred HHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChHHHH-----HHHHHHHHHHHhcCCCceEEEeCCC-CCC
Q 019395 149 NVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTLK-----SYYKAGYDAVRKYTSTAYVIMSNRL-GPA 218 (341)
Q Consensus 149 ~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~~~~~~-----~~~~~~~~aIR~~~p~~~v~~~~~~-~~~ 218 (341)
..+.+.++++.+++||++. |..||++|||..... ....+. .+++.+++++|+++|+..+++.+.. .+.
T Consensus 100 ~~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd~~~~~~ 177 (302)
T d1nq6a_ 100 LRSAMNNHITQVMTHYKGK--IHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQ 177 (302)
T ss_dssp HHHHHHHHHHHHHHHTTTS--CSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSS
T ss_pred HHHHHHHHHHHHHHHcCCC--cceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecccccccC
Confidence 6778889999999999985 777999999964211 111111 4789999999999999999887421 111
Q ss_pred Ch---------hhhhhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC
Q 019395 219 DH---------KELLSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289 (341)
Q Consensus 219 ~~---------~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~ 289 (341)
.. ..+.....+.+-+.+..|.+.... +.+.. .. .+..+.+ .+.||+|+|++...
T Consensus 178 ~~~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~------~~~~~-~~-------~l~~~~~-~g~pi~iTE~d~~~-- 240 (302)
T d1nq6a_ 178 NAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSDF-QA-------NLQRFAD-LGVDVQITELDIEG-- 240 (302)
T ss_dssp SHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTTH-HH-------HHHHHHT-TTCEEEEEEEEECC--
T ss_pred chhhHHHHHHHHHHHhccCCcceeEEEeccCCCCC------ChHHH-HH-------HHHHHHh-cCCceEEecCCCCC--
Confidence 11 111222234566778888774321 11111 11 1222222 37789999999754
Q ss_pred CCCCHHHHHHHHHHHHHH-HccC-CCcEEEeccc
Q 019395 290 KDASKQDYQRFANAQLDV-YGRA-TFGWAYWAHK 321 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~-~~~~-~~Gw~~W~~k 321 (341)
+.+...+++++.+.+ ++.. ..|.++|.+.
T Consensus 241 ---~~~~Qa~~~~~~~~~~~~~p~v~~i~~W~~~ 271 (302)
T d1nq6a_ 241 ---SGSAQAANYTKVVNACLAVTRCTGITVWGVT 271 (302)
T ss_dssp ---CHHHHHHHHHHHHHHHHTSTTEEEEEESCSC
T ss_pred ---CcHHHHHHHHHHHHHHHccCCceEEEEeCCc
Confidence 334445555555544 3333 3478899775
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.22 E-value=1e-10 Score=103.96 Aligned_cols=119 Identities=20% Similarity=0.116 Sum_probs=86.9
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
+.||+.||++|+|+||+... |. + +++++.|.+.||.|+.++-..-... ...+.. ....
T Consensus 39 ~~di~l~k~~G~N~iR~~h~------p~-----~-------~~~~d~cD~~Gilv~~e~~~~~~~~---~~~~~~-~~~~ 96 (297)
T d1yq2a5 39 REDLALMKRFNVNAIRTSHY------PP-----H-------PRLLDLADEMGFWVILECDLETHGF---EAGGWV-ENPS 96 (297)
T ss_dssp HHHHHHHHHTTCCEEEETTS------CC-----C-------HHHHHHHHHHTCEEEEECSCBCGGG---TTTTTT-TCGG
T ss_pred HHHHHHHHHCCCCEEEccCC------CC-----h-------HHHHHHHHhcCCEEEEeeccccccc---cccCcc-CCcc
Confidence 78999999999999998541 11 1 2788999999999999875431110 000000 0000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
-.+...+.+.+.++.+++|++++|.|+.|.+.||+.. .....++.+.+++.+|++++...+
T Consensus 97 ~~~~~~~~~~~~~~emV~r~~NHPSIi~W~~gNE~~~--------~~~~~~~~~~~k~~D~tRp~~~~~ 157 (297)
T d1yq2a5 97 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT--------GSNLAAMAAWAHARDSSRPVHYEG 157 (297)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECTT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCceEeecccccCCc--------hHHHHHHHHHHHHhccCCcccccC
Confidence 0146778899999999999999999999999999874 134567788999999999987654
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=99.20 E-value=1.4e-10 Score=103.92 Aligned_cols=223 Identities=15% Similarity=0.149 Sum_probs=132.0
Q ss_pred HCCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhH
Q 019395 73 SNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSN 149 (341)
Q Consensus 73 ~~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~ 149 (341)
..-||.+..- +.| ..++|.++ .|+ ++.+|++|++|+++||.|+--....+ ++. ......+. +..
T Consensus 34 ~~~fn~~t~~n~~kW-~~iep~~g-~~~---~~~~D~~v~~a~~~gl~v~gh~lvw~-~~~-------p~~~~~~~~~~~ 100 (312)
T d1fh9a_ 34 DSEFNLVVAENAMKW-DATEPSQN-SFS---FGAGDRVASYAADTGKELYGHTLVWH-SQL-------PDWAKNLNGSAF 100 (312)
T ss_dssp HHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHHTCEEEEEEEEES-SSC-------CHHHHTCCHHHH
T ss_pred HHhCCcccccccCcc-hhhcCCCC-cCC---cHHHHHHHHHHHHCCCEEEEeccccc-ccc-------cccccccchHHH
Confidence 3458888764 445 45566553 453 78999999999999999863111111 100 00011122 455
Q ss_pred HHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----ChHHHH----HHHHHHHHHHHhcCCCceEEEeCCCCC-CC-
Q 019395 150 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----ALDTLK----SYYKAGYDAVRKYTSTAYVIMSNRLGP-AD- 219 (341)
Q Consensus 150 ~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~~~~~~----~~~~~~~~aIR~~~p~~~v~~~~~~~~-~~- 219 (341)
.+.+.++++.+++||++. |..||++|||..... ...... .+++.+++++|+.+|+..+++.+.... ..
T Consensus 101 ~~~~~~~i~~v~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~~~ 178 (312)
T d1fh9a_ 101 ESAMVNHVTKVADHFEGK--VASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEGINA 178 (312)
T ss_dssp HHHHHHHHHHHHHHTTTT--CCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSCSSSSH
T ss_pred HHHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcccccch
Confidence 677789999999999984 778999999975221 111222 578999999999999999988742211 11
Q ss_pred -hhhh---h----hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCC
Q 019395 220 -HKEL---L----SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD 291 (341)
Q Consensus 220 -~~~~---~----~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~ 291 (341)
...+ + ....+.+-+.++.|.+.... .++ +.. .+..+.. .+.||+|+|++.......
T Consensus 179 ~~~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~-------~~~-~~~-------~l~~~~~-~g~pi~iTE~d~~~~~~~ 242 (312)
T d1fh9a_ 179 KSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQV-------PGD-FRQ-------NLQRFAD-LGVDVRITELDIRMRTPS 242 (312)
T ss_dssp HHHHHHHHHHHHHHHTCCCCEEEECCEEETTCC-------CTT-HHH-------HHHHHHT-TTCEEEEEEEEEEEESSC
T ss_pred hHHHHHHHHHHHHhCCCCccceeEeecccccCc-------HHH-HHH-------HHHHHHh-cCCceEEeccccccCCCC
Confidence 1112 1 11234566788888875321 111 111 1122232 367899999997542211
Q ss_pred --CCHHHHHHHHHHHHHHHcc-C-CCcEEEeccccCCCCC
Q 019395 292 --ASKQDYQRFANAQLDVYGR-A-TFGWAYWAHKCEANHW 327 (341)
Q Consensus 292 --~~~~~~~~~~~~~~~~~~~-~-~~Gw~~W~~k~~~~~W 327 (341)
.+.+...+++++.+..+.+ . ..|.++|.+.. ...|
T Consensus 243 ~~~~~~~QA~~~~~~~~~~~~~~~v~~v~~W~~~D-~~~W 281 (312)
T d1fh9a_ 243 DATKLATQAADYKKVVQACMQVTRCQGVTVWGITD-KYSW 281 (312)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT-TTCS
T ss_pred ChhHHHHHHHHHHHHHHHHHhcCCccEEEEeCCcc-CCcc
Confidence 1223445677777765444 3 34788998863 3445
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=99.14 E-value=5.8e-10 Score=100.31 Aligned_cols=220 Identities=12% Similarity=0.133 Sum_probs=127.1
Q ss_pred CCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCCCCCCCCccCCc-hhH
Q 019395 74 NGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEHSATRDGFQEWG-DSN 149 (341)
Q Consensus 74 ~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~~g~~~~~~~w~-~~~ 149 (341)
.=||.+=.. +.| ..++|.++ .++ ++.+|++|++|+++||.|.- |... +.+...+.. ..... +..
T Consensus 37 ~~fn~~t~~n~~kW-~~iEp~~G-~~~---~~~~D~~v~~a~~~gi~v~g--h~l~W~~~~p~~~~-----~~~~~~~~~ 104 (324)
T d1vbua1 37 REFNILTPENQMKW-DTIHPERD-RYN---FTPAEKHVEFAEENDMIVHG--HTLVWHNQLPGWIT-----GREWTKEEL 104 (324)
T ss_dssp HHCSEEEESSTTSH-HHHCCBTT-EEE---CHHHHHHHHHHHHTTCEEEE--EEEECSSSCCHHHH-----TSCCCHHHH
T ss_pred HhcCccccccCCch-HHhcCCCC-ccC---hHHHHHHHHHHHHCCCEEEE--ecCcccccCCcccc-----ccccchHHH
Confidence 348888765 555 45567654 453 78999999999999999853 2111 011100000 00111 456
Q ss_pred HHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC---ChHH----HHHHHHHHHHHHHhcCCCceEEEeCCCCCC-Ch-
Q 019395 150 VADTVAVIDFLAARYANRPSLAAIELINEPLAPGV---ALDT----LKSYYKAGYDAVRKYTSTAYVIMSNRLGPA-DH- 220 (341)
Q Consensus 150 ~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~---~~~~----~~~~~~~~~~aIR~~~p~~~v~~~~~~~~~-~~- 220 (341)
.+.+.++++.+++||++. |..||++|||..... .... ...+++.+++++|+.+|+..+++.+..... ..
T Consensus 105 ~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~~~~~~~~ 182 (324)
T d1vbua1 105 LNVLEDHIKTVVSHFKGR--VKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEINAK 182 (324)
T ss_dssp HHHHHHHHHHHHHHTTTT--CCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSSSHH
T ss_pred HHHHHHHHHHHHHhcCCC--ceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCcHh
Confidence 678889999999999984 556999999964211 1111 136789999999999999988887532211 11
Q ss_pred -hhhhh-------ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCC-
Q 019395 221 -KELLS-------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKD- 291 (341)
Q Consensus 221 -~~~~~-------~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~- 291 (341)
..+.. .....+.+.+..|.+... .+. +.+.. .+..+.+ .+.||+++|+|.......
T Consensus 183 ~~~~~~~v~~l~~~~~~id~iG~q~h~~~~~------~~~----~~~~~----~l~~~~~-~g~pi~iTE~~~~~~~~~~ 247 (324)
T d1vbua1 183 SNFVYNMIKELKEKGVPVDGIGFQMHIDYRG------LNY----DSFRR----NLERFAK-LGLQIYITEMDVRIPLSGS 247 (324)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECCEEETTC------CCH----HHHHH----HHHHHHT-TTCEEEEEEEEEEEESSSC
T ss_pred HHHHHHHHHHHHhCCCCcceeEeeeccCcCC------CCH----HHHHH----HHHHHHh-cCCceeeeeceeccCCCCC
Confidence 11111 112345556666654321 111 22221 1222333 367899999996542221
Q ss_pred --CCHHHHHHHHHHHHHHHcc--CCCcEEEecccc
Q 019395 292 --ASKQDYQRFANAQLDVYGR--ATFGWAYWAHKC 322 (341)
Q Consensus 292 --~~~~~~~~~~~~~~~~~~~--~~~Gw~~W~~k~ 322 (341)
.+.+...++++..+.++-+ ...|-++|.+..
T Consensus 248 ~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D 282 (324)
T d1vbua1 248 EEYYLKKQAEVCAKIFDICLDNPAVKAIQFWGFTD 282 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT
T ss_pred ChHHHHHHHHHHHHHHHHHHhcCCeEEEEEecccc
Confidence 1233455666666655443 345788998763
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=99.10 E-value=6.8e-09 Score=91.51 Aligned_cols=116 Identities=17% Similarity=0.139 Sum_probs=86.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+... |. + ++++++|.++||.|+.++-..-....... ...
T Consensus 40 ~~di~l~k~~G~N~iR~~~~------p~-----~-------~~~~~~~D~~Gilv~~e~~~~~~~~~~~~-------~~~ 94 (292)
T d1jz8a5 40 VQDILLMKQNNFNAVRCSHY------PN-----H-------PLWYTLCDRYGLYVVDEANIETHGMVPMN-------RLT 94 (292)
T ss_dssp HHHHHHHHHTTCCEEECTTS------CC-----C-------HHHHHHHHHHTCEEEEECSCBCTTSSSTT-------TTT
T ss_pred HHHHHHHHhcCCCEEEecCC------CC-----h-------HHHHHHHhhcCCeEEeeeeecccCCcccC-------CCC
Confidence 78999999999999998542 11 1 26789999999999999854311100000 000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
-.+...+.+.+.++.+++|++++|.|++|.+.||+... .....+.+.+++.+|.+++....
T Consensus 95 ~~~~~~~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~~--------~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 95 DDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCHHHHHHHHHHHHHHHHHccCCCcHHHhcccccCCcc--------hhhHHHHHHHHHHhhcCcccccc
Confidence 11567888999999999999999999999999999741 24456677899999999998764
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=99.08 E-value=2.1e-09 Score=95.59 Aligned_cols=211 Identities=16% Similarity=0.214 Sum_probs=124.9
Q ss_pred HHHCCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc--
Q 019395 71 LSSNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-- 146 (341)
Q Consensus 71 i~~~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-- 146 (341)
+-..-||.+=.. +.| ..++|.++ .++ ++.+|++|++|+++||.|.--....+.. .+.|.
T Consensus 32 ~~~~~fn~~t~~n~~kW-~~~ep~~g-~~~---~~~~D~~v~~a~~~gi~v~gh~l~w~~~------------~p~w~~~ 94 (302)
T d1v0la_ 32 IAGREFNMVTAENEMKI-DATEPQRG-QFN---FSSADRVYNWAVQNGKQVRGHTLAWHSQ------------QPGWMQS 94 (302)
T ss_dssp HHHHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECSSS------------CCHHHHT
T ss_pred HHHhhCCeeeecccCch-hhhCCCCC-cCC---hHHHHHHHHHHHHCCCEEEEeccccchh------------ccccccc
Confidence 333457877443 445 45566553 453 6889999999999999986422222111 11232
Q ss_pred ---hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC------C--hHHHHHHHHHHHHHHHhcCCCceEEEeCCC
Q 019395 147 ---DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV------A--LDTLKSYYKAGYDAVRKYTSTAYVIMSNRL 215 (341)
Q Consensus 147 ---~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~------~--~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~ 215 (341)
+...+.+.++++.+++||++. |..||++|||...+. . .....+++..+++++|+++|+..|++.+..
T Consensus 95 ~~~~~~~~~~~~~i~~~~~ry~g~--i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~n~~~ 172 (302)
T d1v0la_ 95 LSGSALRQAMIDHINGVMAHYKGK--IVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYN 172 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTT--CSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred cCcHHHHHHHHHHHHHHHhhcCCC--ceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEeecCcc
Confidence 456677889999999999984 667999999964211 1 112336889999999999999999887431
Q ss_pred C-CCC---hhhhhhc-------cCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeec
Q 019395 216 G-PAD---HKELLSF-------ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWT 284 (341)
Q Consensus 216 ~-~~~---~~~~~~~-------~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g 284 (341)
. +.. ...+... ..+.+.+-+..|.+... .+.++ +.. .+..+.. .+.||+|+|++
T Consensus 173 ~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------p~~~~-~~~-------~l~~~~~-~glpi~iTE~d 237 (302)
T d1v0la_ 173 VENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGS------PYNSN-FRT-------TLQNFAA-LGVDVAITELD 237 (302)
T ss_dssp CCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTT-HHH-------HHHHHHT-TTCEEEEEEEE
T ss_pred cccCChHHHHHHHHHHHHHHhCCCCccceEEeeccCCCC------CCHHH-HHH-------HHHHHHh-cCCceEEeecc
Confidence 1 111 1122221 12344455555654211 11111 111 1222333 36789999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 285 CEWNVKDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
... ...+.+.++++..++. ....|.++|.+.
T Consensus 238 ~~~----~qa~~~~~~~~~~~s~--~~v~gi~~Wg~~ 268 (302)
T d1v0la_ 238 IQG----APASTYANVTNDCLAV--SRCLGITVWGVR 268 (302)
T ss_dssp ETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSB
T ss_pred CCC----CCHHHHHHHHHHHHhh--hCCeEEEECCCc
Confidence 754 2455666666655431 245677889775
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=99.08 E-value=1.9e-09 Score=96.55 Aligned_cols=229 Identities=11% Similarity=0.130 Sum_probs=128.9
Q ss_pred HHHHHCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc
Q 019395 69 KFLSSNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG 146 (341)
Q Consensus 69 ~~i~~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~ 146 (341)
+.+-..-||.+=. .+.| ..++|.++ .|+ ++.+|++|++|+++||.|.--.-..+.. ...+. ....+.
T Consensus 31 ~~~~~~~fn~~t~~n~~kW-~~iep~~G-~~~---~~~~D~~v~~a~~~gi~v~gh~l~w~~~-~p~w~-----~~~~~~ 99 (320)
T d1xyza_ 31 NSILQREFSMVVCENEMKF-DALQPRQN-VFD---FSKGDQLLAFAERNGMQMRGHTLIWHNQ-NPSWL-----TNGNWN 99 (320)
T ss_dssp HHHHHHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECSSS-CCHHH-----HTSCCC
T ss_pred HHHHHHhCCeeeecccCch-HHhCCCCC-ccC---hHHHHHHHHHHHHCCCEEEeeccccCCC-CCcch-----hccccc
Confidence 3333344888743 3555 56677664 554 7889999999999999986432221110 00000 000112
Q ss_pred -hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CChHHH-----HHHHHHHHHHHHhcCCCceEEEeCCC-C
Q 019395 147 -DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VALDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRL-G 216 (341)
Q Consensus 147 -~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~~~~~-----~~~~~~~~~aIR~~~p~~~v~~~~~~-~ 216 (341)
+...+.+.++++.+++||++. |..||++|||.... .....+ ..++..+++++|+.+|+..+++.+.. .
T Consensus 100 ~~~~~~~~~~~i~~v~~ry~g~--i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~~~~~ 177 (320)
T d1xyza_ 100 RDSLLAVMKNHITTVMTHYKGK--IVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYNIE 177 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTT--CSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCS
T ss_pred hHHHHHHHHHHHHHHHHHcCCC--ceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeeccccc
Confidence 456778889999999999985 77799999997521 111111 25688999999999999988887431 1
Q ss_pred CCCh--hhhhhc-----cCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC
Q 019395 217 PADH--KELLSF-----ASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289 (341)
Q Consensus 217 ~~~~--~~~~~~-----~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~ 289 (341)
.... ..++.. .....-..+.+|.|.... .. ...++.+.. .+..+... ++||+++|+|.....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~id~iG~q~h~~~~-----~~-~~~~~~~~~----~l~~~~~~-g~pI~iTE~~~~~~~ 246 (320)
T d1xyza_ 178 DLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFING-----MS-PEYLASIDQ----NIKRYAEI-GVIVSFTEIDIRIPQ 246 (320)
T ss_dssp SSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESS-----CC-HHHHHHHHH----HHHHHHHT-TCEEEEEEEEEEEET
T ss_pred cccHHHHHHHHHHHHHHhCcCccceEEecccccCC-----CC-chHHHHHHH----HHHHHHhc-CCceeeeccccccCC
Confidence 1111 222221 122233455555553211 11 111222222 22223333 678999999964332
Q ss_pred CCC---CHHHHHHHHHHHHHHHcc-CC-CcEEEeccc
Q 019395 290 KDA---SKQDYQRFANAQLDVYGR-AT-FGWAYWAHK 321 (341)
Q Consensus 290 ~~~---~~~~~~~~~~~~~~~~~~-~~-~Gw~~W~~k 321 (341)
... +.+...+++++.+.++.+ .. .|.++|.+.
T Consensus 247 ~~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~ 283 (320)
T d1xyza_ 247 SENPATAFQVQANNYKELMKICLANPNCNTFVMWGFT 283 (320)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSB
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhCCCeeEEEEeecc
Confidence 211 123345677776655444 23 488899886
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.03 E-value=1.9e-09 Score=96.90 Aligned_cols=121 Identities=19% Similarity=0.236 Sum_probs=87.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+. .. +.+ +++++.|.++||.|+.++...+..... ..+ ......
T Consensus 42 ~~~l~~~k~~G~N~iR~~----~~--~~~------------~~f~d~~D~~Gi~V~~e~~~~~~w~~~--~~~-~~~~~~ 100 (339)
T d2vzsa5 42 ADKLKYVLNLGLNTVRLE----GH--IEP------------DEFFDIADDLGVLTMPGWECCDKWEGQ--VNG-EEKGEP 100 (339)
T ss_dssp HHHHHHHHHTTCCEEEEE----SC--CCC------------HHHHHHHHHHTCEEEEECCSSSGGGTT--TST-TSSSCC
T ss_pred HHHHHHHHHcCCCEEEec----CC--CCC------------HHHHHHHHHCCCeEecccccCcccccc--CCc-ccccCC
Confidence 789999999999999983 11 111 358889999999999987654321110 001 011122
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceEEEeC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+.+...+.+.+.++.+++|++++|.|++|.+.||+.. . ..+...+.+.+|+.||.++++...
T Consensus 101 ~~p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~---~----~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 101 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAP---D----RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCC---C----HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCc---h----HHHHHHHHHHHHHhCCCceeEecC
Confidence 3367778889999999999999999999999999874 1 234556677889999999887654
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=99.02 E-value=6.5e-09 Score=92.32 Aligned_cols=208 Identities=15% Similarity=0.210 Sum_probs=125.2
Q ss_pred CCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc------h
Q 019395 76 INAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------D 147 (341)
Q Consensus 76 ~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~------~ 147 (341)
||.+=. .+.| ..++|.++ .++ ++.+|++|++|+++||.|.--....+. + .+.|. +
T Consensus 37 fn~~t~en~~kW-~~iEp~~G-~~~---~~~~D~~v~~a~~~gl~v~gH~lvW~~-~-----------~P~w~~~~~~~~ 99 (301)
T d1ta3b_ 37 FGVITPENSMKW-DALEPSQG-NFG---WSGADYLVDYATQHNKKVRGHTLVWHS-Q-----------LPSWVSSIGDAN 99 (301)
T ss_dssp CSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEECSS-S-----------CCHHHHTCCCHH
T ss_pred CCeecccccCcc-hhhCCCCC-cCC---cHHHHHHHHHHHHCCCEEEEeccccCc-c-----------CchhhhccccHH
Confidence 777764 2334 45667654 443 688999999999999986642111111 0 12232 3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC---CChH--HH--HHHHHHHHHHHHhcCCCceEEEeCC--CCCC
Q 019395 148 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG---VALD--TL--KSYYKAGYDAVRKYTSTAYVIMSNR--LGPA 218 (341)
Q Consensus 148 ~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~---~~~~--~~--~~~~~~~~~aIR~~~p~~~v~~~~~--~~~~ 218 (341)
...+.+.++++.+++||++. |-.||++|||.... .... .. ..++..+++++|+.+|+..+++.+. ....
T Consensus 100 ~~~~~~~~~I~~v~~rY~g~--i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~~ 177 (301)
T d1ta3b_ 100 TLRSVMTNHINEVVGRYKGK--IMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSAS 177 (301)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCTT
T ss_pred HHHHHHHHHHHHHHHhcCCC--cceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeeccccccccc
Confidence 45677889999999999984 67799999995421 1111 11 2688999999999999998888742 2111
Q ss_pred Ch--hhhhh-------ccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC
Q 019395 219 DH--KELLS-------FASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289 (341)
Q Consensus 219 ~~--~~~~~-------~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~ 289 (341)
.. ..+.. .....+.+.+..|..... .+.+. +.. .+..++..+.++|.++|++...
T Consensus 178 ~~~~~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~------~~~~~-~~~-------~l~~~~~~g~~~i~iTE~dv~~-- 241 (301)
T d1ta3b_ 178 YAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSH------WSSTE-AAG-------ALSSLANTGVSEVAITELDIAG-- 241 (301)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTC------CCGGG-HHH-------HHHHHHTTCCSEEEEEEEEETT--
T ss_pred hHHHHHHHHHHHHHHhCCCCcceeeeeeecCCCC------CCHHH-HHH-------HHHHHHHcCCCcccccccccch--
Confidence 11 11211 123456677777765321 11111 111 2223344445679999998754
Q ss_pred CCCCHHHHHHHHHHHHHHHccCCCcEEEecccc
Q 019395 290 KDASKQDYQRFANAQLDVYGRATFGWAYWAHKC 322 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k~ 322 (341)
...+.+.++++..++ .....|.++|.+..
T Consensus 242 --~qa~~~~~~~~~~~~--~p~v~gi~~Wg~~D 270 (301)
T d1ta3b_ 242 --AASSDYLNLLNACLN--EQKCVGITVWGVSD 270 (301)
T ss_dssp --CCHHHHHHHHHHHHT--CTTEEEEEESCSBG
T ss_pred --HHHHHHHHHHHHHHc--ccCceEEEEcCCcc
Confidence 245556666655443 22556888998863
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.99 E-value=1.1e-08 Score=93.40 Aligned_cols=222 Identities=14% Similarity=0.138 Sum_probs=125.1
Q ss_pred HCCCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEE---ecCCCCCCCCCCCCCCCCCCccCCc-
Q 019395 73 SNGINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIV---DLHAAPGSQNGNEHSATRDGFQEWG- 146 (341)
Q Consensus 73 ~~G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vil---dlh~~~g~~~~~~~~g~~~~~~~w~- 146 (341)
..-||+|=. .+.| ..++|.++ .|+ ++.+|++|++|+++||.|.- -.|... +...... .....
T Consensus 44 ~~~fn~~t~eN~mKW-~~iep~~G-~~n---f~~~D~~v~~a~~~gi~v~GH~lvW~~~~--~~~~~~~-----~~~~~~ 111 (364)
T d1us3a2 44 KKHFNHLTAGNIMKM-SYMQPTEG-NFN---FTNADAFVDWATENNMTVHGHALVWHSDY--QVPNFMK-----NWAGSA 111 (364)
T ss_dssp HHHCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEECCGG--GSCHHHH-----TCCSCH
T ss_pred HHhCCeeeecccCCh-HHhcCCCC-ccC---cHHHHHHHHHHHHCCCEEEEeecCCCccc--CCccccc-----cCCccH
Confidence 344777754 3444 45566553 554 78999999999999999863 112110 0000000 00012
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC-------CChHHHH------HHHHHHHHHHHhcCCCceEEEeC
Q 019395 147 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG-------VALDTLK------SYYKAGYDAVRKYTSTAYVIMSN 213 (341)
Q Consensus 147 ~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~-------~~~~~~~------~~~~~~~~aIR~~~p~~~v~~~~ 213 (341)
+...+.+.++++.+++||++...|..||++|||.... .....+. .++..+++++|+.+|+..+++.+
T Consensus 112 ~~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~nd 191 (364)
T d1us3a2 112 EDFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYND 191 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhccccceeecc
Confidence 3455677789999999999766799999999996421 1111122 27888999999999999888874
Q ss_pred CCCCC-C--hhhh-------hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEee
Q 019395 214 RLGPA-D--HKEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 283 (341)
Q Consensus 214 ~~~~~-~--~~~~-------~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~ 283 (341)
..... . ...+ .....+.+-+-+..|.+.... + +..+.. .+..+.. .+.||+|+|+
T Consensus 192 y~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p------~----~~~i~~----~l~~~~~-~g~~I~iTEl 256 (364)
T d1us3a2 192 YNIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYP------S----IANISA----AMKKVVD-LGLLVKITEL 256 (364)
T ss_dssp SSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------C----HHHHHH----HHHHHHT-TTCEEEEEEE
T ss_pred ccccccchhhhHHHHHHHHHHhCCCccccceeeeeccCCCC------C----HHHHHH----HHHHHHh-cCCeeEEEee
Confidence 21111 1 1111 111234556777888774321 1 122221 1222232 3678999999
Q ss_pred cCCCCCC-----------CCC---HHHHHHHHHHHHHHHcc-----CCCcEEEeccc
Q 019395 284 TCEWNVK-----------DAS---KQDYQRFANAQLDVYGR-----ATFGWAYWAHK 321 (341)
Q Consensus 284 g~~~~~~-----------~~~---~~~~~~~~~~~~~~~~~-----~~~Gw~~W~~k 321 (341)
+...... ..+ .....+++++.+.++.+ ...|.++|.+.
T Consensus 257 di~~~~~~~~~~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~~~~~~~~vt~Wg~~ 313 (364)
T d1us3a2 257 DVAVNQPHCDAYPANKINPLTEAAQLAQKKRYCDVVKAYLDTVPVNQRGGISVWGTT 313 (364)
T ss_dssp EEESSCTTSTTTTTTCCCSCCHHHHHHHHHHHHHHHHHHHHHSCGGGEEEEEESCSB
T ss_pred eEecccCccccccccccCCCChHHHHHHHHHHHHHHHHHHhcccccccceEEEecCC
Confidence 8643211 111 22334555555555432 22378899764
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.97 E-value=1.6e-08 Score=90.87 Aligned_cols=222 Identities=11% Similarity=0.124 Sum_probs=123.7
Q ss_pred CCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEe---cC-CCCCCCCCCCCCCCCCCccCCc-h
Q 019395 75 GINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVD---LH-AAPGSQNGNEHSATRDGFQEWG-D 147 (341)
Q Consensus 75 G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vild---lh-~~~g~~~~~~~~g~~~~~~~w~-~ 147 (341)
-||++=.. +.| ..++|.++ .++ ++.+|++|++|+++||.|.-- .| ..|...... . ....+. +
T Consensus 36 ~fn~~t~~n~~kW-~~iep~~g-~~~---~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~W~~~~-~-----~~~~~~~~ 104 (330)
T d1n82a_ 36 HVNSITAENHMKF-EHLQPEEG-KFT---FQEADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQD-G-----QGHFVSRD 104 (330)
T ss_dssp HCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGBC-S-----SSSBCCHH
T ss_pred hcCccccccCCCh-HhhcCCCC-ccC---hHHHHHHHHHHHHCCCEEEEeecccCCCCCchhccC-C-----cCCcCCHH
Confidence 47777764 555 45666653 453 688999999999999987531 23 233221100 0 011122 4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCC----CChHHH-----HHHHHHHHHHHHhcCCCceEEEeCCCCCC
Q 019395 148 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPG----VALDTL-----KSYYKAGYDAVRKYTSTAYVIMSNRLGPA 218 (341)
Q Consensus 148 ~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~----~~~~~~-----~~~~~~~~~aIR~~~p~~~v~~~~~~~~~ 218 (341)
+..+.+.++++.+++||++. |..||++|||.... .....+ ..+++.++.++|+++|+..+++.+.....
T Consensus 105 ~~~~~~~~~i~~v~~ry~g~--v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~~~~~~ 182 (330)
T d1n82a_ 105 VLLERMKCHISTVVRRYKGK--IYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYNDYNECF 182 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--CCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSTTS
T ss_pred HHHHHHHHHHHHHHHhcCCC--ceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeeccccccc
Confidence 55677889999999999985 67799999996421 111112 35788999999999999998887422111
Q ss_pred Ch--hhhhhc---c--CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCC-
Q 019395 219 DH--KELLSF---A--SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVK- 290 (341)
Q Consensus 219 ~~--~~~~~~---~--~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~- 290 (341)
.. ..+... . .+..-..+.+|.|.... .. .++.+.. .+..++.. +.||.++|++......
T Consensus 183 ~~~~~~~~~~v~~l~~~g~~idgiG~q~h~~~~----~~----~~~~i~~----~l~~~~~~-g~~i~iTE~d~~~~~~~ 249 (330)
T d1n82a_ 183 PEKREKIFALVKSLRDKGIPIHGIGMQAHWSLT----RP----SLDEIRA----AIERYASL-GVVLHITELDVSMFEFH 249 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEECCEEESS----SS----CHHHHHH----HHHHHHTT-TCEEEEEEEEEESSCTT
T ss_pred ccchhhHHHHHHHHHhCCCCcceEEEeecCccC----cC----CHHHHHH----HHHHHHhc-CCceeeccccccccCcc
Confidence 10 111111 1 12223445555442111 01 1222222 22233333 6789999998643210
Q ss_pred -------CCCH---HHHHHHHHHHHHHHcc--CC-CcEEEecccc
Q 019395 291 -------DASK---QDYQRFANAQLDVYGR--AT-FGWAYWAHKC 322 (341)
Q Consensus 291 -------~~~~---~~~~~~~~~~~~~~~~--~~-~Gw~~W~~k~ 322 (341)
..+. +....++++.+.++.+ .+ -|.++|.+..
T Consensus 250 ~~~~~~~~~~~~~~~~QA~~~~~~~~~~~~~~p~v~gi~~Wg~~D 294 (330)
T d1n82a_ 250 DRRTDLAAPTSEMIERQAERYGQIFALFKEYRDVIQSVTFWGIAD 294 (330)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESCSBT
T ss_pred cccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCeeEEEEecCcc
Confidence 1112 2345666666655432 33 3888998753
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.83 E-value=6.7e-08 Score=85.67 Aligned_cols=205 Identities=18% Similarity=0.272 Sum_probs=119.6
Q ss_pred CCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc------h
Q 019395 76 INAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG------D 147 (341)
Q Consensus 76 ~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~------~ 147 (341)
||.+=. .+.| ..++|.++ .+ .++.+|++|++|+++||.|.= |..- +++ ..+.|. .
T Consensus 40 fn~~t~eN~~KW-~~~ep~~G-~~---~~~~~D~~v~~a~~~gi~vrG--H~lv------W~~----~~P~W~~~~~~~~ 102 (303)
T d1i1wa_ 40 FGQVTPENSMKW-DATEPSQG-NF---NFAGADYLVNWAQQNGKLIRG--HTLV------WHS----QLPSWVSSITDKN 102 (303)
T ss_dssp CSEEEESSTTSH-HHHCSBTT-BC---CCHHHHHHHHHHHHHTCEEEE--EEEE------CST----TCCHHHHTCCCHH
T ss_pred CCcccccccCcc-hhhcCCCC-cc---ChHHHHHHHHHHHHCCCEEEE--eeee------ecC----cCchhhhcccccH
Confidence 565553 2234 45566553 44 378999999999999998642 2110 000 012232 2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC----C-hHHH--HHHHHHHHHHHHhcCCCceEEEeCC--CCCC
Q 019395 148 SNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV----A-LDTL--KSYYKAGYDAVRKYTSTAYVIMSNR--LGPA 218 (341)
Q Consensus 148 ~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~----~-~~~~--~~~~~~~~~aIR~~~p~~~v~~~~~--~~~~ 218 (341)
...+...++++.+++||++. |..||++|||..... + ..+. .+++..++++.|+++|+..+++.+- ....
T Consensus 103 ~~~~~~~~~i~~v~~rY~g~--i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Ndy~~~~~~ 180 (303)
T d1i1wa_ 103 TLTNVMKNHITTLMTRYKGK--IRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSAS 180 (303)
T ss_dssp HHHHHHHHHHHHHHHHTTTS--CSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSS
T ss_pred HHHHHHHHHHHHHHHHcCCC--CchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeecCcccCCc
Confidence 34556778999999999884 777999999975221 1 1111 2578899999999999999999752 1111
Q ss_pred C--hhhhh-------hccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCC
Q 019395 219 D--HKELL-------SFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNV 289 (341)
Q Consensus 219 ~--~~~~~-------~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~ 289 (341)
. ...+. ....+-+-+-+..|.-.. .... +.. .+..+.+.+++||.++|+....
T Consensus 181 ~~k~~~~~~~v~~l~~~g~~iDgiG~Q~H~~~~--------~~~~----~~~----~~~~~~~~g~~~i~iTElDi~~-- 242 (303)
T d1i1wa_ 181 YPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAG--------QGAS----VLQ----ALPLLASAGTPEVAITELDVAG-- 242 (303)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEECTT--------THHH----HHH----HHHHHHTTCCSEEEEEEEEETT--
T ss_pred HHHHHHHHHHHHHHHhCCCCccceEeeeccCCC--------CcHH----HHH----HHHHHHHcCCCceeeccccccc--
Confidence 1 11121 111233444455553211 1111 111 1223445566679999998643
Q ss_pred CCCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 290 KDASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
.....+.++++..++ .....|.++|.+.
T Consensus 243 --~qa~~y~~~~~~~~~--~p~v~git~Wg~~ 270 (303)
T d1i1wa_ 243 --ASSTDYVNVVNACLN--VSSCVGITVWGVA 270 (303)
T ss_dssp --CCHHHHHHHHHHHHH--CTTEEEEEESCSB
T ss_pred --ccHHHHHHHHHHHhc--cCCceEEEEeCCc
Confidence 345666677666543 1356688899886
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=98.59 E-value=1.7e-06 Score=78.42 Aligned_cols=223 Identities=13% Similarity=0.117 Sum_probs=121.0
Q ss_pred CCCEEEc--CcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCC-CCCCCCCC----CCCCC--CccCC
Q 019395 75 GINAVRI--PVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAP-GSQNGNEH----SATRD--GFQEW 145 (341)
Q Consensus 75 G~N~VRl--pi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~-g~~~~~~~----~g~~~--~~~~w 145 (341)
-||++=. .+-| ..++|.++ .++ ++..|++|++|+++||.|.= |..- +++...+. .|... ....+
T Consensus 43 ~Fn~~t~eN~mKW-~~iep~~G-~~n---~~~aD~~v~~a~~ngi~vrG--H~LvW~~~~P~W~~~~~~~~~~~~~~~~~ 115 (371)
T d1r85a_ 43 HFNSIVAENVMKP-ISIQPEEG-KFN---FEQADRIVKFAKANGMDIRF--HTLVWHSQVPQWFFLDKEGKPMVNETDPV 115 (371)
T ss_dssp HCSEEEESSTTSH-HHHCSBTT-BCC---CHHHHHHHHHHHHTTCEEEE--ECSCCSTTCCGGGGBCTTSSBGGGCCCHH
T ss_pred hcCeecccccCcc-hhhcCCCC-ccC---cHHHHHHHHHHHHCCCEEEE--eEEEeeccccccccccccccccccccccc
Confidence 4888854 2444 45566553 453 78899999999999999743 2221 11111110 11100 00001
Q ss_pred c-----hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCC--h----HHH-HHHHHHHHHHHHhc-CCCceEEEe
Q 019395 146 G-----DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVA--L----DTL-KSYYKAGYDAVRKY-TSTAYVIMS 212 (341)
Q Consensus 146 ~-----~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~--~----~~~-~~~~~~~~~aIR~~-~p~~~v~~~ 212 (341)
. ....+...++++.++.||++ .|..||++|||...... . +.+ ..++..+++..|+. +|...+++.
T Consensus 116 ~~~~~~e~l~~~~~~~I~~v~~rY~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~~p~~~L~~N 193 (371)
T d1r85a_ 116 KREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYGGDNIKLYMN 193 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ccccCHHHHHHHHHHHHHHHHHHcCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhcCCcceeeec
Confidence 1 22345567899999999998 47779999999642211 0 111 35788899999987 567677775
Q ss_pred CC--CCCCChhhh-------hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEee
Q 019395 213 NR--LGPADHKEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEW 283 (341)
Q Consensus 213 ~~--~~~~~~~~~-------~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~ 283 (341)
+. ........+ .....+-+.+-++.|...... +. +.+.. .+..+++. |.||.|+|+
T Consensus 194 dy~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~------~~----~~i~~----~l~~~a~~-Gl~i~ITEl 258 (371)
T d1r85a_ 194 DYNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWP------SE----AEIEK----TINMFAAL-GLDNQITEL 258 (371)
T ss_dssp ESCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSS------CH----HHHHH----HHHHHHHT-TCEEEEEEE
T ss_pred cccccccchhHHHHHHHHHHHHCCCCcceeeccccccCCCC------CH----HHHHH----HHHHHHHc-CCceEEeee
Confidence 42 111111122 111234566778888764221 11 12221 22223333 678999999
Q ss_pred cCCCCCC---------CCC---HHHHHHHHHHHHHHHcc---CCCcEEEeccc
Q 019395 284 TCEWNVK---------DAS---KQDYQRFANAQLDVYGR---ATFGWAYWAHK 321 (341)
Q Consensus 284 g~~~~~~---------~~~---~~~~~~~~~~~~~~~~~---~~~Gw~~W~~k 321 (341)
-...... ..+ .....+++++.+.++.+ ..-|.++|.+.
T Consensus 259 DV~~~~~~~~~~~~~~~~~~e~~~~QA~~y~~~~~~~~~~~p~v~git~WG~~ 311 (371)
T d1r85a_ 259 DVSMYGWPPRAYPTYDAIPKQKFLDQAARYDRLFKLYEKLSDKISNVTFWGIA 311 (371)
T ss_dssp EECSSCSSCCCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSS
T ss_pred EeccCCCccccCcccccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEeCCC
Confidence 6532110 011 12345566666666543 24588999775
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.55 E-value=3.1e-07 Score=81.92 Aligned_cols=120 Identities=20% Similarity=0.166 Sum_probs=83.0
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++||+.||++|+|+||+.-+. .+ + . +.+++.|.++||.|+.++.... +.. .
T Consensus 48 ~~di~l~ke~G~N~IR~~~~~----~~-p-~----------~~f~d~cD~~GilV~~e~~~~~---~~~----------~ 98 (348)
T d2je8a5 48 QTLFRDMKEANMNMVRIWGGG----TY-E-N----------NLFYDLADENGILVWQDFMFAC---TPY----------P 98 (348)
T ss_dssp HHHHHHHHHTTCCEEEECTTS----CC-C-C----------HHHHHHHHHHTCEEEEECSCBS---SCC----------C
T ss_pred HHHHHHHHHcCCCEEecCCCC----CC-C-C----------HHHHHHHHHCCCEEEeccchhc---cCC----------C
Confidence 789999999999999983210 11 1 1 3667999999999999975321 100 0
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC--------CCChHHHHH--------HHHHHHHHHHhcCCCce
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP--------GVALDTLKS--------YYKAGYDAVRKYTSTAY 208 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~--------~~~~~~~~~--------~~~~~~~aIR~~~p~~~ 208 (341)
..+...+.+.+-++.+++|++++|.|++|.+.||+... ......... +.......+++.+|..+
T Consensus 99 ~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
T d2je8a5 99 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 178 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCc
Confidence 11466788888999999999999999999999997531 112222222 22234567788889888
Q ss_pred EEEeC
Q 019395 209 VIMSN 213 (341)
Q Consensus 209 v~~~~ 213 (341)
+...+
T Consensus 179 ~~~~~ 183 (348)
T d2je8a5 179 YVHSS 183 (348)
T ss_dssp EESSB
T ss_pred eecCC
Confidence 87654
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.54 E-value=4.3e-06 Score=75.14 Aligned_cols=185 Identities=12% Similarity=0.087 Sum_probs=106.3
Q ss_pred HCCCCEEEcC--cccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEE---EecCCC-CCCCCCCCCCCCCCCccCCc
Q 019395 73 SNGINAVRIP--VGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVI---VDLHAA-PGSQNGNEHSATRDGFQEWG 146 (341)
Q Consensus 73 ~~G~N~VRlp--i~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vi---ldlh~~-~g~~~~~~~~g~~~~~~~w~ 146 (341)
..-||++=.- +.| ..++|.++ .|+ ++..|++|++|+++||.|- |=.|.. |.... ... ......
T Consensus 33 ~~~Fn~~t~eN~~KW-~~ie~~~G-~~~---~~~~D~~v~~a~~~gi~vrGH~LvW~~~~P~w~~-----~~~-~~~~~~ 101 (350)
T d1ur1a_ 33 AKEFNSITPENCMKW-GVLRDAQG-QWN---WKDADAFVAFGTKHNLHMVGHTLVWHSQIHDEVF-----KNA-DGSYIS 101 (350)
T ss_dssp HHHCSEEEESSTTSH-HHHBCTTC-CBC---CHHHHHHHHHHHHTTCEEEEEEEECSSSSCGGGT-----BCT-TSCBCC
T ss_pred HHHcCeecccccCch-hhhcCCCC-ccC---hHHHHHHHHHHHHCCCEEEEEEEEEccccccccc-----ccC-CccccC
Confidence 3456666432 233 44556553 554 6899999999999999863 334432 21100 000 001112
Q ss_pred -hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCC--ChHH----H-HHHHHHHHHHHHhcCCCceEEEeCCCCCC
Q 019395 147 -DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGV--ALDT----L-KSYYKAGYDAVRKYTSTAYVIMSNRLGPA 218 (341)
Q Consensus 147 -~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~--~~~~----~-~~~~~~~~~aIR~~~p~~~v~~~~~~~~~ 218 (341)
....+...++++.++.||++ .|..||++|||..... .... + ..++..++++.|+.+|+..+++-+-....
T Consensus 102 ~~~l~~~~~~~I~~v~~ry~g--~i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Ndyn~~~ 179 (350)
T d1ur1a_ 102 KAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYNDYNIER 179 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESSTTS
T ss_pred HHHHHHHHHHHHHHHHHhcCC--cceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeeccccccc
Confidence 34556677899999999987 4677999999975221 1111 1 24788999999999999998886421111
Q ss_pred C--hhhh-------hhccCCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecC
Q 019395 219 D--HKEL-------LSFASGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 285 (341)
Q Consensus 219 ~--~~~~-------~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~ 285 (341)
. ...+ .....+-+-+-++.|..... .+ ++.+.. .+..+++. +.+|.++|+..
T Consensus 180 ~~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~~~~------~~----~~~i~~----~l~~~~~l-g~~i~iTElDv 240 (350)
T d1ur1a_ 180 TGKREATVEMIERLQKRGMPIHGLGIQGHLGIDT------PP----IAEIEK----SIIAFAKL-GLRVHFTSLDV 240 (350)
T ss_dssp TTHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SC----HHHHHH----HHHHHHTT-TCEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHhCCCCceEEEEeeeccCCC------CC----HHHHHH----HHHHHHhc-CCceeecccce
Confidence 1 1122 22223456677888976331 11 122221 12223333 66799999875
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.48 E-value=7e-06 Score=71.30 Aligned_cols=209 Identities=15% Similarity=0.113 Sum_probs=118.9
Q ss_pred HCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHH
Q 019395 73 SNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVAD 152 (341)
Q Consensus 73 ~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~ 152 (341)
.+|++.+|+||.. . ...+...-.+++.|.++|++++......|+..-.. +...+...-.++..+.
T Consensus 31 g~g~s~~R~~id~------~------~~~~~~~i~~~k~A~~~~~ki~~spWSpP~wMK~n---~~~~~gg~L~~~~~~~ 95 (277)
T d1nofa2 31 QIGLSIMRVRIDP------D------SSKWNIQLPSARQAVSLGAKIMATPWSPPAYMKSN---NSLINGGRLLPANYSA 95 (277)
T ss_dssp CCCCCEEEEECCS------S------GGGGGGGHHHHHHHHHTTCEEEEECSCCCGGGBTT---SSSBSCCBBCGGGHHH
T ss_pred CCcceEEEeeeCC------C------cchhhHhhHHHHHHHHcCCcEEEcCCCCcHHHcCC---CCcccCCccCHHHHHH
Confidence 5899999999842 1 11223345677778999999999988888753211 1110111112577788
Q ss_pred HHHHHHHHHHHhCCCC-ceeEEEeecCCCCCC------CChHHHHHHHHHHHHHHHhcCCCceEEEeCCCCC--CChhhh
Q 019395 153 TVAVIDFLAARYANRP-SLAAIELINEPLAPG------VALDTLKSYYKAGYDAVRKYTSTAYVIMSNRLGP--ADHKEL 223 (341)
Q Consensus 153 ~~~~~~~la~~y~~~~-~v~~~el~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~~--~~~~~~ 223 (341)
+++++..+++.|+..- .|.++.+.|||.... .+.++..++++.... ...+..|+..+..+. ......
T Consensus 96 ~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~~----~~~~~ki~~~d~~~~~~~~~~~~ 171 (277)
T d1nofa2 96 YTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGS----KFGSLKVIVAESLGFNPALTDPV 171 (277)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGG----GGTTSEEEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhhh----cccccceEeehhcCCcHHHhHHH
Confidence 8888888888887643 578888999998632 234666666655432 223455665532221 111222
Q ss_pred hhcc-CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHHHHHHHH
Q 019395 224 LSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQDYQRFAN 302 (341)
Q Consensus 224 ~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~~~~~~~ 302 (341)
+..+ ....-..+.+|.|.... ... . ..+..+++++++|.++.......+-+.-..+..
T Consensus 172 l~d~~a~~~v~~ia~H~Y~~~~---~~~------~------------~~~~~~K~lw~TE~~~~~~~~~~~w~~a~~~a~ 230 (277)
T d1nofa2 172 LKDSDASKYVSIIGGHLYGTTP---KPY------P------------LAQNAGKQLWMTEHYVDSKQSANNWTSAIEVGT 230 (277)
T ss_dssp HTCHHHHTTCCEEEEECTTSCC---CCC------H------------HHHHTTCEEEEEEECSCTTSCTTCHHHHHHHHH
T ss_pred hhChHHHHHHHHhhccCCCCCc---ccc------h------------hhhCCCccceeEEeeccCCCCcccHHHHHHHHH
Confidence 2211 11223579999995311 000 0 011236689999987533222223344455555
Q ss_pred HHHHHHccCCCcEEEeccc
Q 019395 303 AQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 303 ~~~~~~~~~~~Gw~~W~~k 321 (341)
.....+..+..+|.+|...
T Consensus 231 ~i~~~l~~~~~a~~~W~~~ 249 (277)
T d1nofa2 231 ELNASMVSNYSAYVWWYIR 249 (277)
T ss_dssp HHHHHHHTTEEEEEEEESB
T ss_pred HHHHHHHcCCeeEEEcCCc
Confidence 5556666666789999543
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=98.40 E-value=5.7e-06 Score=74.18 Aligned_cols=124 Identities=19% Similarity=0.277 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHcCCeEE---EecCCCCCCCCCCCCCCCCCCccCCc----hhHHHHHHHHHHHHHHHhCCCCceeEEE
Q 019395 102 SKVLDNAFDWAEKYGVKVI---VDLHAAPGSQNGNEHSATRDGFQEWG----DSNVADTVAVIDFLAARYANRPSLAAIE 174 (341)
Q Consensus 102 l~~ld~~i~~a~~~gi~vi---ldlh~~~g~~~~~~~~g~~~~~~~w~----~~~~~~~~~~~~~la~~y~~~~~v~~~e 174 (341)
++..|+++++|+++||.|. |=.|. ..+ .+.|. .+..+...++++.+++||++. |-.||
T Consensus 59 ~~~~D~~v~~a~~ng~~vrGH~LvW~~--~~~-----------~P~w~~~~~~~~~~~~~~~I~~v~~ry~g~--i~~WD 123 (346)
T d1w32a_ 59 FTNSDRLVSWAAQNGQTVHGHALVWHP--SYQ-----------LPNWASDSNANFRQDFARHIDTVAAHFAGQ--VKSWD 123 (346)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECCC--GGG-----------CCTTCSTTCTTHHHHHHHHHHHHHHHTTTT--CSEEE
T ss_pred chHHHHHHHHHHHCCCEEEEEeeecCC--ccc-----------CcccccCCcHHHHHHHHHHHHHHHHhhCCc--ceEEE
Confidence 6889999999999999874 22332 111 12232 345677889999999999984 77799
Q ss_pred eecCCCCCCC-------------ChHHHH-----HHHHHHHHHHHhcCCCceEEEeCCCCCCC---hhhhhh-------c
Q 019395 175 LINEPLAPGV-------------ALDTLK-----SYYKAGYDAVRKYTSTAYVIMSNRLGPAD---HKELLS-------F 226 (341)
Q Consensus 175 l~NEP~~~~~-------------~~~~~~-----~~~~~~~~aIR~~~p~~~v~~~~~~~~~~---~~~~~~-------~ 226 (341)
++|||..... ....+. .|++.+++..|+.+|+..+++.+...... ...+.. .
T Consensus 124 VvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~dP~a~L~~Ndyn~~~~~~k~~~~~~lv~~L~~~ 203 (346)
T d1w32a_ 124 VVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELYYNDFNTEENGAKTTALVNLVQRLLNN 203 (346)
T ss_dssp EEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEEEEESSTTSCSHHHHHHHHHHHHHHHT
T ss_pred EEeeeccccccCccccccccccccchhhhhccChHHHHHHHHHHHHhCCCCEEEeccCCcccCcHHHHHHHHHHHHHHhc
Confidence 9999975210 001122 57889999999999999999875321111 122221 2
Q ss_pred cCCCCcEEEEeeec
Q 019395 227 ASGLSRVVIDVHYY 240 (341)
Q Consensus 227 ~~~~~~~v~~~H~Y 240 (341)
..+-+-+-++.|..
T Consensus 204 g~pIDgIG~Q~H~~ 217 (346)
T d1w32a_ 204 GVPIDGVGFQMHVM 217 (346)
T ss_dssp TCCCCEEEECCEEE
T ss_pred CCccceEEEEeecc
Confidence 23456788888965
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.35 E-value=6.3e-06 Score=74.22 Aligned_cols=156 Identities=14% Similarity=0.193 Sum_probs=94.2
Q ss_pred HHHHHHHHHCCCCEEEcCcc-------cccccCCC---CC------CCcccchHHHHHHHHHHHHHcCCeEEEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVG-------WWIANDPT---PP------KPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~-------~~~~~~~~---~~------~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g 128 (341)
.+-++.|++++...+|.|=+ |-..+.|. ++ +.+....+ -+++++++|++.|..++|.+....+
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~-G~~Ef~~~~~~~gaep~~~vn~g~~ 115 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEI-GLNEFMDWAKMVGAEVNMAVNLGTR 115 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSS-CHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCC-CHHHHHHHHHHhCCeEEEEEeCCCc
Confidence 67789999999999999732 22222221 11 00001111 4789999999999999998865321
Q ss_pred CCCCCCCCCCCCCccCCchhHHHHHHHHHHHH-----------HHHhC-CCC-ceeEEEeecCCCCC----CCChHHHHH
Q 019395 129 SQNGNEHSATRDGFQEWGDSNVADTVAVIDFL-----------AARYA-NRP-SLAAIELINEPLAP----GVALDTLKS 191 (341)
Q Consensus 129 ~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~l-----------a~~y~-~~~-~v~~~el~NEP~~~----~~~~~~~~~ 191 (341)
..+...+.++.+ -.+.+ ..| .|--|||-||+..+ ..+.+.+..
T Consensus 116 --------------------~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~ 175 (367)
T d1qw9a2 116 --------------------GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGR 175 (367)
T ss_dssp --------------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHH
T ss_pred --------------------cHHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHH
Confidence 123333333322 12221 123 58789999998752 346788999
Q ss_pred HHHHHHHHHHhcCCCceEEEeCCCCC--CC---h-hhhhhccCCCCcEEEEeeecCC
Q 019395 192 YYKAGYDAVRKYTSTAYVIMSNRLGP--AD---H-KELLSFASGLSRVVIDVHYYNL 242 (341)
Q Consensus 192 ~~~~~~~aIR~~~p~~~v~~~~~~~~--~~---~-~~~~~~~~~~~~~v~~~H~Y~~ 242 (341)
.+++.+++||+.+|+..++..++-.. .. + ..+++. ....-..++.|+|..
T Consensus 176 ~~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~-~~~~iD~is~H~Y~~ 231 (367)
T d1qw9a2 176 IACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDH-TYDHVDYISLHQYYG 231 (367)
T ss_dssp HHHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHHHHHhhcCCCeeEEEEeCCCCCCcccchHHHHHHhh-ccccCCcccccCCCC
Confidence 99999999999999977765532111 11 1 112221 122335789998854
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=98.18 E-value=1.7e-06 Score=77.90 Aligned_cols=60 Identities=18% Similarity=0.328 Sum_probs=51.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g 128 (341)
++||+.||++|+|.|++.|- |..+++..++.|+ |+.++++++.++++||+ ||+..|...|
T Consensus 32 ~~~L~~LK~aGV~gV~vdVw-WGivE~~~Pg~Yd---ws~yd~l~~mv~~~GLKi~vvmsfH~cGg 93 (417)
T d1vema2 32 ENDLRWAKQNGFYAITVDFW-WGDMEKNGDQQFD---FSYAQRFAQSVKNAGMKMIPIISTHQCGG 93 (417)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-HHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEeee-eeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 99999999999999999995 6788886556786 89999999999999986 5888887533
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.04 E-value=0.00011 Score=65.67 Aligned_cols=233 Identities=16% Similarity=0.134 Sum_probs=122.3
Q ss_pred HCCCCEEEcCcccccc------cCCCCCC----Ccc--cchHHHHHHHHHHHHH---cCCeEEEecCCCCCCCC--CCCC
Q 019395 73 SNGINAVRIPVGWWIA------NDPTPPK----PFV--GGSSKVLDNAFDWAEK---YGVKVIVDLHAAPGSQN--GNEH 135 (341)
Q Consensus 73 ~~G~N~VRlpi~~~~~------~~~~~~~----~~~--~~~l~~ld~~i~~a~~---~gi~vildlh~~~g~~~--~~~~ 135 (341)
.+|++.+|++|+=-.+ ....+.+ .++ ...-+.+..+++.|++ .+|+|+......|+... +...
T Consensus 36 Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~aspWSpP~wMk~n~~~~ 115 (354)
T d2nt0a2 36 GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVN 115 (354)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSSS
T ss_pred CceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcCCCCchhhhcCCccc
Confidence 5999999999852111 0001111 111 1111223345666655 46889998888887532 1111
Q ss_pred CCCCCCccCCchhHHHHHHHHHHHHHHHhCCCC-ceeEEEeecCCCCC----------CCChHHHHHHHHH-HHHHHHhc
Q 019395 136 SATRDGFQEWGDSNVADTVAVIDFLAARYANRP-SLAAIELINEPLAP----------GVALDTLKSYYKA-GYDAVRKY 203 (341)
Q Consensus 136 ~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~-~v~~~el~NEP~~~----------~~~~~~~~~~~~~-~~~aIR~~ 203 (341)
.+.. ....-.++..+.+++++..+++.|+.+- .|-++.+.|||... ..+.++..+++.+ +-.++++.
T Consensus 116 ~~~~-~~~~l~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~~~ 194 (354)
T d2nt0a2 116 GKGS-LKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANS 194 (354)
T ss_dssp SSCB-BSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTS
T ss_pred CCCC-cCCccchhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1110 0000114577888888888888887653 57778899999631 1356788888865 67788887
Q ss_pred CCCceE-EEe-CCCCC-CC-hhhhhhcc-CCCCcEEEEeeecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCce
Q 019395 204 TSTAYV-IMS-NRLGP-AD-HKELLSFA-SGLSRVVIDVHYYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLT 278 (341)
Q Consensus 204 ~p~~~v-~~~-~~~~~-~~-~~~~~~~~-~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv 278 (341)
+....+ +.. ..... .. ...++..+ ....-.++.+|.|.... ......+..+. .+..++++
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~v~~ia~H~Y~~~~-----~~~~~~~~~~~----------~~~p~k~~ 259 (354)
T d2nt0a2 195 THHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFL-----APAKATLGETH----------RLFPNTML 259 (354)
T ss_dssp TTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSC-----CCHHHHHHHHH----------HHCTTSEE
T ss_pred CCCceEEEeeCCcccchHHHHHHHhcCHhHHHhcCeEEEecCCCCC-----CchhHHHHHHH----------HhCCCceE
Confidence 755433 332 21111 11 11222111 11123479999995311 01111111111 12246789
Q ss_pred EEEeecCCCCC-C----CCCHHHHHHHHHHHHHHHccCCCcEEEeccc
Q 019395 279 FVGEWTCEWNV-K----DASKQDYQRFANAQLDVYGRATFGWAYWAHK 321 (341)
Q Consensus 279 ~vGE~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~Gw~~W~~k 321 (341)
+++|.++.... . ......-..+.+..+..+.....+|.+|..-
T Consensus 260 w~TE~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~a~~~W~l~ 307 (354)
T d2nt0a2 260 FASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLA 307 (354)
T ss_dssp EEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESE
T ss_pred EeeeeccCCCCCCcccccCcHHHHHHHHHHHHHHHHhhhhhheehhhh
Confidence 99999763211 1 1122333445555565565566799999653
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=97.87 E-value=0.00033 Score=60.16 Aligned_cols=204 Identities=12% Similarity=0.074 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC
Q 019395 103 KVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP 182 (341)
Q Consensus 103 ~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~ 182 (341)
..+.+.++.+...|..++|++.-..++... ...| .+-+...++.+.|.+ + +.| |+ +.+.+|+++.
T Consensus 42 ~~~~~~~~~~~~~g~~~~it~~P~~~~~~~-ia~G----------~yD~~i~~~a~~l~~-~-g~p-v~-~R~~hE~ng~ 106 (273)
T d2v3ga1 42 SWVRPYADAVYNNGSILMITWEPWEYNTVD-IKNG----------KADAYITRMAQDMKA-Y-GKE-IW-LRPLHEANGD 106 (273)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCCHHH-HHTT----------TTHHHHHHHHHHHHH-H-CSC-EE-EEESCCTTSS
T ss_pred hhHHHHHHHHHhCCCeEEEEeCCCCCCHHH-HhCc----------chHHHHHHHHHHHHh-c-CCC-EE-EEecccCCCC
Confidence 556677788899999999998743211000 0001 122333344444433 3 445 33 7799999852
Q ss_pred -----------CCChHHHHHHHHHHHHHHHhcCCCceEEEeCCC--CCCChhhhhhccCCCCcE-EEEeeecCCCCcccc
Q 019395 183 -----------GVALDTLKSYYKAGYDAVRKYTSTAYVIMSNRL--GPADHKELLSFASGLSRV-VIDVHYYNLFSNNFN 248 (341)
Q Consensus 183 -----------~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~~~~--~~~~~~~~~~~~~~~~~~-v~~~H~Y~~~~~~~~ 248 (341)
..+++.+++.++.+++++|+.+.+.++++-+.. .......+..+.++++.| ++++..|........
T Consensus 107 W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYPGDdyVD~vG~d~Y~~~~~~~~ 186 (273)
T d2v3ga1 107 WYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQSW 186 (273)
T ss_dssp SSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCTT
T ss_pred cccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCCCCCEEEEEEEeccCCCCcccc
Confidence 135688999999999999998777666663211 111122333333344433 788888864321110
Q ss_pred CccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCCCCCCCCCHHH-HHHHHHHHHHHHccCCCcEEEeccccCCCCC
Q 019395 249 GLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCEWNVKDASKQD-YQRFANAQLDVYGRATFGWAYWAHKCEANHW 327 (341)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Gw~~W~~k~~~~~W 327 (341)
........+.+.. .. ...+..++|++|+|||.... +..+.. +..+++...+.+. ...+..++... ...+|
T Consensus 187 ~~~~~~~~~~~~~----~~-~~~~~~~KPi~i~E~G~~~~--~~~~~~W~~~~~~~~~~~~p-~v~~~vwfn~~-~~~Dw 257 (273)
T d2v3ga1 187 GSQWQSFDQVFSR----AY-QALASINKPIIIAEFASAEI--GGNKARWITEAYNSIRTSYN-KVIAAVWFHEN-KETDW 257 (273)
T ss_dssp TCCCCCHHHHHHH----HH-HHHTTSSSCEEEEEEEECST--TSCHHHHHHHHHHHHHHHCT-TEEEEEEECCB-SSSBC
T ss_pred hhhhhhHHHHHHH----HH-HHHHhCCCCEEEEeecCCCC--CCchhHHHHHHHHHHHhhCC-cEEEEEEecCC-CCCCC
Confidence 1111111111111 11 22334478899999997653 233322 2333332222222 23344444433 22667
Q ss_pred ChH
Q 019395 328 SLK 330 (341)
Q Consensus 328 ~~~ 330 (341)
.+.
T Consensus 258 r~~ 260 (273)
T d2v3ga1 258 RIN 260 (273)
T ss_dssp CTT
T ss_pred ccc
Confidence 764
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=97.16 E-value=0.0067 Score=52.56 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=68.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.||+.|++.||| | +. +. ++++.++..||+|+|.+..... ..
T Consensus 16 ~~Vv~llks~~i~~VRl---Y----~~------d~-------~vL~A~~~~gi~v~lGv~n~~l--------------~~ 61 (306)
T d1ghsa_ 16 SDVVQLYRSKGINGMRI---Y----FA------DG-------QALSALRNSGIGLILDIGNDQL--------------AN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SC------CH-------HHHHHTTTSCCEEEEECCGGGH--------------HH
T ss_pred HHHHHHHHhCCCCEEEE---e----CC------CH-------HHHHHHHhcCCEEEEEeccchh--------------hh
Confidence 45567788999999997 2 11 11 4667788999999998753210 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
+ ....+...+.++.....|.....|-++-+-||-.. .....+...++.+.+++++.+=
T Consensus 62 ~-~~~~~~a~~~v~~~i~~~~~~~~I~~I~VGNEvl~--~~~~~l~~a~~~i~~al~~~gl 119 (306)
T d1ghsa_ 62 I-AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG--GATQSILPAMRNLNAALSAAGL 119 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCG--GGGGGHHHHHHHHHHHHHHHTC
T ss_pred h-ccCHHHHHHHHHHHHHhhCCCceEEEEEecceecc--CCcchhHHHHHHHHHHHHHCCC
Confidence 1 12344555555555556666667888889999763 2345677888888888887764
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=97.14 E-value=0.0066 Score=52.73 Aligned_cols=107 Identities=20% Similarity=0.205 Sum_probs=68.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.|+++|++.||| | ++ + . ++++.++..||+|+|.+.... ...
T Consensus 16 ~~vv~lLk~~~i~~IRl---Y----~~---d---~-------~vL~A~~~tgi~v~lGv~n~~--------------l~~ 61 (312)
T d2cyga1 16 SEVVSLYKSNNIARMRL---Y----DP---N---Q-------AALQALRNSNIQVLLDVPRSD--------------VQS 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---S----SC---C---H-------HHHHHHTTSCCEEEEEECHHH--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---e----CC---C---H-------HHHHHHHhcCCEEEEeeccch--------------hhh
Confidence 45577889999999997 2 11 1 1 467778889999999874320 000
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
+. ...+...+.++.....|.....|-++-+-||+.............+....++++..+=.
T Consensus 62 ~~-~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~ 122 (312)
T d2cyga1 62 LA-SNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp HH-HCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred cc-CCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCC
Confidence 10 11223445555555567666778778899998754433344556666778888887643
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.03 E-value=0.005 Score=54.56 Aligned_cols=134 Identities=11% Similarity=0.156 Sum_probs=76.7
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccCCCCCCCc-----c--cchHHHHHHHHHHHHHcCCeEEEec---CCCCCC-----
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKPF-----V--GGSSKVLDNAFDWAEKYGVKVIVDL---HAAPGS----- 129 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~~~~-----~--~~~l~~ld~~i~~a~~~gi~vildl---h~~~g~----- 129 (341)
+.++.|+++|+|+|=| ||.- .....+..+. + -+..+.++++|+.|+++||+||+|+ |..+..
T Consensus 57 ~kldyl~~LGv~~i~L~Pi~~--~~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~ 134 (382)
T d1j0ha3 57 DHLDYLVDLGITGIYLTPIFR--SPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQD 134 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEE--CSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHH
T ss_pred HhHHHHHHcCCCEEEeCCCCc--CCcccCCCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchh
Confidence 4578999999999997 5521 1000000010 1 1468999999999999999999998 222110
Q ss_pred ---------CC--------CCCCC--CCC------CC--ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCC
Q 019395 130 ---------QN--------GNEHS--ATR------DG--FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLA 181 (341)
Q Consensus 130 ---------~~--------~~~~~--g~~------~~--~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~ 181 (341)
.+ ..... ... .. ...+. +..++..++.++..++.| .|-||-+-.=++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~----giDGfR~Da~~~- 209 (382)
T d1j0ha3 135 VWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREF----DIDGWRLDVANE- 209 (382)
T ss_dssp HHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHH----CCCEEEETTGGG-
T ss_pred hhccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhc----cccEEEecchhh-
Confidence 00 00000 000 00 11122 566777788888888777 333443333222
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 182 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 182 ~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
-...+.++..+++++..|+..++.+
T Consensus 210 ------~~~~~~~~~~~~~~~~~p~~~~i~e 234 (382)
T d1j0ha3 210 ------IDHEFWREFRQEVKALKPDVYILGE 234 (382)
T ss_dssp ------SCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ------cchhhhhhhhhhhhccCCCcccccc
Confidence 1234566677788899998866543
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=96.93 E-value=0.0018 Score=58.55 Aligned_cols=139 Identities=12% Similarity=0.106 Sum_probs=77.8
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccCCCCCCC-----cc--cchHHHHHHHHHHHHHcCCeEEEecC---CCCCCCCCCC
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIANDPTPPKP-----FV--GGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGSQNGNE 134 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~~~-----~~--~~~l~~ld~~i~~a~~~gi~vildlh---~~~g~~~~~~ 134 (341)
+-|+.|+++|+|+|=| ||.-......-+..+ .+ -+..+.|+++|+.|+++||+||+|+- ..+... .+.
T Consensus 38 ~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~-~~~ 116 (420)
T d2bhua3 38 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGN-YLS 116 (420)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CHH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccccccCCCCc-ccc
Confidence 4489999999999997 442100000000001 11 24689999999999999999999984 322110 000
Q ss_pred CC-C--------CC-CCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhc
Q 019395 135 HS-A--------TR-DGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKY 203 (341)
Q Consensus 135 ~~-g--------~~-~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~ 203 (341)
.. + .. .....|. ++.++.+++.++..++.|+ -..+- +|.++--. . .....+..++.+++++.
T Consensus 117 ~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~G-VDGfR-~D~~~~l~--~---~~~~~~~~~~~~~~~~~ 189 (420)
T d2bhua3 117 SYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH-FDGLR-LDATPYMT--D---DSETHILTELAQEIHEL 189 (420)
T ss_dssp HHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHC-CSEEE-ETTGGGCC--C---CSSSCHHHHHHHHHHTT
T ss_pred ccccccccccccccccccccccChHHHHHHHHHhheeeeccc-ccEEE-Eeeeeeec--c---ccccccHHHHHHHHHhh
Confidence 00 0 00 0111223 7788888888888876662 12221 23222111 0 11123556778889999
Q ss_pred CCCceEEEe
Q 019395 204 TSTAYVIMS 212 (341)
Q Consensus 204 ~p~~~v~~~ 212 (341)
+|+..++.+
T Consensus 190 ~p~~~~i~E 198 (420)
T d2bhua3 190 GGTHLLLAE 198 (420)
T ss_dssp CSCCEEEEE
T ss_pred cCCceeeec
Confidence 998877654
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=96.90 E-value=0.02 Score=49.46 Aligned_cols=103 Identities=18% Similarity=0.166 Sum_probs=67.3
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQE 144 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~ 144 (341)
++-++.||++|++.||| | ++ + . ++++.++..||+|+|.+....- ..
T Consensus 16 ~~Vv~lLk~~~i~~IRl---Y----~~---d---~-------~vL~A~~~~gi~v~lGv~n~~l--------------~~ 61 (306)
T d1aq0a_ 16 STVVSMFKSNGIKSMRL---Y----AP---N---Q-------AALQAVGGTGINVVVGAPNDVL--------------SN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---S----SC---C---H-------HHHHHHTTSCCEEEEEECGGGH--------------HH
T ss_pred HHHHHHHHhCCCCEEEE---e----CC---C---H-------HHHHHHHhcCCEEEEeccchhh--------------hh
Confidence 45577889999999997 2 11 1 1 4777888999999998854210 00
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 019395 145 WGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTS 205 (341)
Q Consensus 145 w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 205 (341)
+ ....++....++.....| ....|-++-+-||... .....+...++.+.+++++.+-
T Consensus 62 ~-~~~~~~~~~~v~~~v~~~-~~~~I~~i~VGNE~~~--~~~~~l~~a~~ni~~al~~~gl 118 (306)
T d1aq0a_ 62 L-AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG--GATRNLVPAMKNVHGALVAAGL 118 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCG--GGGGGHHHHHHHHHHHHHHTTC
T ss_pred c-cCCHHHHHHHHHHhcccc-CCceEEEEEeccEeec--CCccchhhHHHHHHHHHHHCCC
Confidence 1 123445555666655544 4456777889999874 2234566777888888887764
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=96.83 E-value=0.0038 Score=56.20 Aligned_cols=107 Identities=17% Similarity=0.329 Sum_probs=74.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCCCCCCC---------
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPGSQNGN--------- 133 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g~~~~~--------- 133 (341)
++.|+.||++|+.-|=+.+ ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|.....
T Consensus 31 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGGNvGD~~~IPLP~WV 106 (490)
T d1wdpa1 31 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQYD---WRAYRSLLQLVQECGLTLQAIMSFHQCGGNVGDIVNIPIPQWV 106 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCCC---CHHHHHHHHHHHHTTCEEEEEEECSCBCCSTTCSCCBCSCHHH
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCccC---hHHHHHHHHHHHHcCCeEEEEEeecccCCCCCcccccCCcHHH
Confidence 8899999999999999999 77777776566775 89999999999999998 677889764432110
Q ss_pred -------------CCCCCCC---------CccCCc-hhHHHHHHHHHHHHHHHhCC---CCceeEEEe
Q 019395 134 -------------EHSATRD---------GFQEWG-DSNVADTVAVIDFLAARYAN---RPSLAAIEL 175 (341)
Q Consensus 134 -------------~~~g~~~---------~~~~w~-~~~~~~~~~~~~~la~~y~~---~~~v~~~el 175 (341)
+.+|.+. ..+.+. +..++.+.++.+.+.+.|++ ...|..+++
T Consensus 107 ~~~g~~~pDi~ftDr~G~rn~E~lSl~~D~~pvl~GRTplq~Y~DFm~SFr~~F~~~~~~g~I~eI~V 174 (490)
T d1wdpa1 107 LDIGESNHDIFYTNRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFRENMSDFLESGLIIDIEV 174 (490)
T ss_dssp HHHHHHCGGGEEECTTCCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHHHHTHHHHHTTCEEEEEE
T ss_pred HhhhccCCCceeecCCCCcccceeeeeeccccccCCCcHHHHHHHHHHHHHHHHHHhccCCeEEEEEe
Confidence 1112111 112222 44678888899888888766 234544444
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=96.82 E-value=0.00094 Score=58.93 Aligned_cols=65 Identities=23% Similarity=0.303 Sum_probs=43.0
Q ss_pred HHHhhccCHHHHHHHHHCCCCEEEc-CcccccccCCCCC--------------CCcc--cchHHHHHHHHHHHHHcCCeE
Q 019395 57 DHWDSYITDEDFKFLSSNGINAVRI-PVGWWIANDPTPP--------------KPFV--GGSSKVLDNAFDWAEKYGVKV 119 (341)
Q Consensus 57 ~~~~~~~~e~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~--------------~~~~--~~~l~~ld~~i~~a~~~gi~v 119 (341)
.+|+. | .+-++.||++|+|+|-| |+.-......... ...+ -+..+.++++|+.|+++||+|
T Consensus 20 ~~~~~-i-~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~V 97 (390)
T d1ud2a2 20 QHWNR-L-HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINV 97 (390)
T ss_dssp CHHHH-H-HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEE
T ss_pred CCHHH-H-HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCce
Confidence 45644 3 55589999999999999 3320000000000 0112 236899999999999999999
Q ss_pred EEec
Q 019395 120 IVDL 123 (341)
Q Consensus 120 ildl 123 (341)
|||+
T Consensus 98 ilDv 101 (390)
T d1ud2a2 98 YGDV 101 (390)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9998
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=96.77 E-value=0.015 Score=51.13 Aligned_cols=136 Identities=14% Similarity=0.123 Sum_probs=75.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccC-----CCCCCCcc--cchHHHHHHHHHHHHHcCCeEEEecC---CCCCC-----
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAND-----PTPPKPFV--GGSSKVLDNAFDWAEKYGVKVIVDLH---AAPGS----- 129 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~-----~~~~~~~~--~~~l~~ld~~i~~a~~~gi~vildlh---~~~g~----- 129 (341)
.+.++.|+++|+|+|-|.=-+. ... +.....++ -+..+.++++|+.|+++||+||+|+- ..+..
T Consensus 54 ~~kLdylk~LGv~~i~l~Pi~~-~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~ 132 (382)
T d1ea9c3 54 IDHLDHLSKLGVNAVYFTPLFK-ATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVD 132 (382)
T ss_dssp HHTHHHHHHHTCSEEEECCCSS-CSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHH
T ss_pred HHhhHHHHhCCCCEEEeCCCcc-CCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEeeecccccccCcchhh
Confidence 3457899999999999832111 100 00001111 24689999999999999999999983 22110
Q ss_pred ------C---CCC--------C-CCCCC--------CC--ccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCC
Q 019395 130 ------Q---NGN--------E-HSATR--------DG--FQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPL 180 (341)
Q Consensus 130 ------~---~~~--------~-~~g~~--------~~--~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~ 180 (341)
. ..+ . ..+.. .. ...+. +..++..++.+..+.+.| .|-||-+-.=.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~----gvDGfR~Da~~~ 208 (382)
T d1ea9c3 133 VLKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRET----GIDGWRLDVANE 208 (382)
T ss_dssp HHTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHH----CCSEEEETTCTT
T ss_pred hhhcCCcccccccccccccccccccCcccccccccccccCccccccHHHHHHHHHHHhhcccce----eeeEEEecchhh
Confidence 0 000 0 00000 00 01112 556677778888888776 233443322111
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 181 APGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
.+ ..+.+...+++++..|+..++..
T Consensus 209 ---~~----~~~~~~~~~~~~~~~p~~~~~~e 233 (382)
T d1ea9c3 209 ---VS----HQFWREFRRVVKQANPDAYILGE 233 (382)
T ss_dssp ---SC----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ---Cc----hhhhhhhhhhhhhcCCCeeEEee
Confidence 22 34456667788889998877654
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=96.65 E-value=0.0042 Score=56.00 Aligned_cols=59 Identities=24% Similarity=0.517 Sum_probs=50.5
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAP 127 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~ 127 (341)
++.|+.||++|+.-|=+.+ ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...
T Consensus 30 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCG 90 (500)
T d1b1ya_ 30 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAYD---WSAYKQLFELVQKAGLKLQAIMSFHQCG 90 (500)
T ss_dssp HHHHHHHHHTTCCEEEEEE-ETTTGGGGSTTCCC---CHHHHHHHHHHHHHTCEEEEEEECSCBS
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCccC---cHHHHHHHHHHHHcCCeEEEEEeecccC
Confidence 7899999999999999999 77777765556776 89999999999999997 678889653
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=96.64 E-value=0.0099 Score=52.82 Aligned_cols=59 Identities=25% Similarity=0.380 Sum_probs=40.5
Q ss_pred HHHHHHHHHCCCCEEEc-Cccccccc-----CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~-----~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.|+.|+++|+|+|=| ||.-.... .+......++ +..+.|+++|+.|+++||+||||+
T Consensus 32 ~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~VilD~ 98 (400)
T d1eh9a3 32 IRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDV 98 (400)
T ss_dssp HHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCCceeeec
Confidence 34589999999999999 34100000 0111111122 478999999999999999999998
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.51 E-value=0.0023 Score=57.28 Aligned_cols=59 Identities=22% Similarity=0.200 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccC-CCCC--------------CCcc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIAND-PTPP--------------KPFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~-~~~~--------------~~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++.++.||++|+|+|-|+=-+..... .... ...+ -+..+.|+++|+.|+++||+||+|+
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 67889999999999999421111000 0000 0111 1468999999999999999999997
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=96.34 E-value=0.025 Score=50.48 Aligned_cols=57 Identities=16% Similarity=0.157 Sum_probs=38.8
Q ss_pred HHHHHHHHCCCCEEEc-CcccccccCCCC---CCC-----cc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIANDPTP---PKP-----FV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~~~~~---~~~-----~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-|+.|+++|+|+|-| ||. ..-..+.. ..+ .+ -+..+.++++|+.|+++||+||+|+
T Consensus 57 ~kLdyl~~LGv~~I~l~Pi~-~~~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~ 124 (422)
T d1h3ga3 57 DHLDYIAGLGFTQLWPTPLV-ENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 124 (422)
T ss_dssp HTHHHHHHHTCCEEEECCCE-ECCCSSCGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHCCCCEEEeCCcc-cCCCCCCCCCCCCccccCCcccccCCHHHHHHHHHHHHHhCccccccC
Confidence 3478999999999997 341 00000000 001 11 1468999999999999999999998
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=96.28 E-value=0.013 Score=53.36 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=22.6
Q ss_pred chHHHHHHHHHHHHHcCCeEEEec
Q 019395 100 GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 100 ~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+..+.|+++|+.|+++||+||+|+
T Consensus 108 Gt~~d~~~LV~~aH~~GIrVilD~ 131 (475)
T d1bf2a3 108 GPTAEFQAMVQAFHNAGIKVYMDV 131 (475)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHhcCcEEEEEe
Confidence 568999999999999999999998
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=96.25 E-value=0.0033 Score=56.23 Aligned_cols=59 Identities=25% Similarity=0.281 Sum_probs=40.4
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCC----C-----------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPP----K-----------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~----~-----------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.||++|+|+|-|+=-+........+ . ..++ +..+.++++|+.|+++||+||+|+
T Consensus 24 ~~kLdylk~LGvtaI~L~Pi~~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCccCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 455999999999999993111111100000 0 1122 458999999999999999999998
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.0036 Score=55.12 Aligned_cols=146 Identities=16% Similarity=0.115 Sum_probs=76.6
Q ss_pred HHHHHHHHHCCCCEEEcC-ccccccc-----CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec---CCCCCCCCC-
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIAN-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL---HAAPGSQNG- 132 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~-----~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl---h~~~g~~~~- 132 (341)
++-++.|+++|+|+|-|. |.-.... .+......++ +..+.|+++|+.|+++||+||||+ |..+.....
T Consensus 44 ~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~~~~~~ 123 (396)
T d1m7xa3 44 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDDFALA 123 (396)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCSTTSST
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhcccccccCCcccccc
Confidence 555799999999999993 3100000 0000000111 468999999999999999999998 332211000
Q ss_pred ----CC---CCCCC-C-----CccC--Cc-hhHHHHHHHHHHHHHHHhCCCC-ceeE---------E-----EeecCCCC
Q 019395 133 ----NE---HSATR-D-----GFQE--WG-DSNVADTVAVIDFLAARYANRP-SLAA---------I-----ELINEPLA 181 (341)
Q Consensus 133 ----~~---~~g~~-~-----~~~~--w~-~~~~~~~~~~~~~la~~y~~~~-~v~~---------~-----el~NEP~~ 181 (341)
.. ..... . +... +. +...+...+.++.....|+-+- .+-. + .+.++..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~~~~~- 202 (396)
T d1m7xa3 124 EFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFG- 202 (396)
T ss_dssp TGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCSHHHHCC--------------C-
T ss_pred cccCCccccccCCCCCCCCCCCCccccCCCchhHHHHHHHHHHHHHHhCCcceeeechhhhccchhccccccccccccc-
Confidence 00 00000 0 0011 11 4555666666666666663221 0100 0 0001111
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 182 PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 182 ~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
.........+.+.+...++...|+..++.+
T Consensus 203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 232 (396)
T d1m7xa3 203 -GRENLEAIEFLRNTNRILGEQVSGAVTMAE 232 (396)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred -ccccchHHHHHHHHHHHHhhhCCCceEEEe
Confidence 122234556778888999999999888765
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=96.07 E-value=0.0045 Score=54.71 Aligned_cols=58 Identities=24% Similarity=0.266 Sum_probs=40.6
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccC--CCCC--------------CCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIAND--PTPP--------------KPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~--~~~~--------------~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.||++|+|+|=|+ |. ..... .... ...++ +..+.|+++|+.|+++||+||||+
T Consensus 31 ~~kLdylk~LGv~~Iwl~Pv~-~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~ 107 (361)
T d1mxga2 31 RSKIPEWYEAGISAIWLPPPS-KGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (361)
T ss_dssp HHHHHHHHHHTCCEEECCCCS-EETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCcCe-eCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 677899999999999985 32 11000 0000 01122 358999999999999999999998
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=96.07 E-value=0.0073 Score=52.81 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=41.6
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCC-----------CCC--Ccc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPT-----------PPK--PFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~-----------~~~--~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.||++|+|+|=|+-.+....... ... ..+ -+..+.|+++|+.|+++||+||+|+
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~vd~~~Gt~~df~~LV~~aH~~GI~VIlD~ 113 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcccCccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 6678999999999999964332111000 000 111 1468999999999999999999998
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=96.02 E-value=0.0066 Score=52.61 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=40.5
Q ss_pred HHHHHHHHHCCCCEEEcC-cc----cccccCCCCCCCcc---cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 65 DEDFKFLSSNGINAVRIP-VG----WWIANDPTPPKPFV---GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~----~~~~~~~~~~~~~~---~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.+-++.|+++|+|+|-|+ +. .|.. .+.....++ -+..+.++++|+.|+++||+||+|+-
T Consensus 24 ~~kLdyl~~lGv~~i~L~Pi~~~~~~~gY-~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 24 MGKVDDIAAAGVTHVWLPPPSHSVSNEGY-MPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV 90 (347)
T ss_dssp HTTHHHHHHTTCCEEEECCCSCBSSTTSS-SBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhHHHHHHcCCCEEEECCCCcCCCCCCC-CccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeecc
Confidence 344889999999999993 21 1100 011101112 25689999999999999999999983
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=95.94 E-value=0.006 Score=54.40 Aligned_cols=59 Identities=29% Similarity=0.369 Sum_probs=40.7
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCC----C-----------Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPP----K-----------PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~----~-----------~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=|+=-+........+ . ..++ +..+.|+++|+.|+++||+||||+
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 778899999999999984211110000000 0 1121 468999999999999999999998
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=95.94 E-value=0.0047 Score=55.64 Aligned_cols=60 Identities=25% Similarity=0.573 Sum_probs=51.2
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCe--EEEecCCCCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVK--VIVDLHAAPG 128 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~--vildlh~~~g 128 (341)
++.|+.||++|+.-|=+.+ ||-..+...+..|+ |+.++++++.+++.||+ ||+.+|...|
T Consensus 37 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Yd---WsgY~~l~~mvr~~GLKlq~vmSFHqCGG 98 (498)
T d1fa2a_ 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQYD---WSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBCC---CHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCccC---cHHHHHHHHHHHHcCCeeEEEEeecccCC
Confidence 7899999999999999999 77777766556775 89999999999999998 6778887533
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=95.73 E-value=0.0068 Score=53.97 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=39.8
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCC-CCC---CCc--------c--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDP-TPP---KPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~-~~~---~~~--------~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-|+.|+++|+|+|-| ||. ...... .++ ..| + -+..+.|+++|+.|+++||+||+|+
T Consensus 46 ~~kLdyL~~LGv~~I~L~Pi~-~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~ 118 (381)
T d2aaaa2 46 IDHLDYIEGMGFTAIWISPIT-EQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCE-EECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCc-cCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhcccccc
Confidence 35689999999999997 342 111000 000 001 1 2468999999999999999999998
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=95.71 E-value=0.0073 Score=53.73 Aligned_cols=59 Identities=17% Similarity=0.280 Sum_probs=40.1
Q ss_pred HHHHHHHHCCCCEEEc-Cccccccc-C--CCCCCCcc----------cchHHHHHHHHHHHHHcCCeEEEecC
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAN-D--PTPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~-~--~~~~~~~~----------~~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
+-|+.|+++|+|+|=| ||.-.... . ..+...|. -+..+.++++|+.|+++||+||+|+-
T Consensus 47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 119 (381)
T d2guya2 47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (381)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeecc
Confidence 4589999999999998 33211000 0 00111111 24689999999999999999999983
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=95.57 E-value=0.0063 Score=53.47 Aligned_cols=60 Identities=18% Similarity=0.255 Sum_probs=41.2
Q ss_pred cCHHHHHHHHHCCCCEEEcCcccc--------cccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 63 ITDEDFKFLSSNGINAVRIPVGWW--------IANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 63 ~~e~d~~~i~~~G~N~VRlpi~~~--------~~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
|.++-.+.|+++|+++|=|+=... ..-++... ..++ +..+.|+++|+.|+++||+||||+
T Consensus 16 i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy-~vd~~~Gt~~dfk~LV~~aH~~GI~VilDv 85 (354)
T d1g94a2 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSY-ELQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (354)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcc-eeCCCCCCHHHHHHHHHHHhccCceeEEEe
Confidence 334455679999999999953221 11112111 1222 468999999999999999999998
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=95.46 E-value=0.0058 Score=57.19 Aligned_cols=58 Identities=21% Similarity=0.325 Sum_probs=39.2
Q ss_pred HHHHHHHHCCCCEEEc-Cccccccc--CCCCCCCc--------c----------cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIAN--DPTPPKPF--------V----------GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~~--~~~~~~~~--------~----------~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-|+.||++|+|+|=| ||.-..-. .+.....| + -+..+.++++|+.|+++||+||||+
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDv 202 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDF 202 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEe
Confidence 4478999999999998 34210000 00000001 1 1468999999999999999999998
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=95.36 E-value=0.0094 Score=52.66 Aligned_cols=59 Identities=19% Similarity=0.246 Sum_probs=39.6
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCCCCCC---Ccc--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDPTPPK---PFV--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~~~~~---~~~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-|+.||++|+|+|-| ||.-...-...... ..+ -+..+.++++|+.|+++||+||+|+
T Consensus 56 ~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~ 120 (382)
T d1wzla3 56 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDA 120 (382)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEeee
Confidence 34578999999999997 55210000000000 011 1468999999999999999999996
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=95.33 E-value=0.0038 Score=55.96 Aligned_cols=59 Identities=24% Similarity=0.255 Sum_probs=38.8
Q ss_pred HHHHH--HHHHCCCCEEEc-Ccccccc--------cCCCCCCCc--------c--cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFK--FLSSNGINAVRI-PVGWWIA--------NDPTPPKPF--------V--GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~--~i~~~G~N~VRl-pi~~~~~--------~~~~~~~~~--------~--~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-|+ .|+++|+|+|=| |+.-... ..+....-| + =+..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 58 INKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp HHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccccHHHHHHHHHHHHhccccceeee
Confidence 34455 799999999999 5421000 000000011 1 1468999999999999999999998
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=95.31 E-value=0.013 Score=53.34 Aligned_cols=54 Identities=22% Similarity=0.441 Sum_probs=39.0
Q ss_pred HHHHHHHHCCCCEEEcC-cccccccCCCCCCCc--------cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRIP-VGWWIANDPTPPKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRlp-i~~~~~~~~~~~~~~--------~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-|+.|+++|+|+|-|. |. ..+....-| ++ +..+.++++|+.|+++||+||||+
T Consensus 35 ~kLdyLk~LGv~~I~L~Pi~----~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 35 EKLDYLKSLGIDAIWINPHY----DSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HTHHHHHHHTCCEEEECCCE----ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCC----CCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 45789999999999983 31 111110011 11 468999999999999999999998
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=95.30 E-value=0.013 Score=53.34 Aligned_cols=55 Identities=18% Similarity=0.357 Sum_probs=38.2
Q ss_pred HHHHHHHCCCCEEEc-CcccccccCCCCC-C-----Cccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 67 DFKFLSSNGINAVRI-PVGWWIANDPTPP-K-----PFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 67 d~~~i~~~G~N~VRl-pi~~~~~~~~~~~-~-----~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
-|+.|+++|+|+|-| ||. .......+ . ..++ +..+.++++|+.|+++||+||||+
T Consensus 36 kLdYLk~LGv~~I~l~Pi~--~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 36 KLDYLKELGIDVIWLSPVY--ESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp THHHHHHHTCCEEEECCCE--ECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHcCCCEEEECCCc--CCCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 378999999999998 331 01000000 0 0111 468999999999999999999997
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=95.19 E-value=0.018 Score=50.93 Aligned_cols=58 Identities=28% Similarity=0.386 Sum_probs=39.2
Q ss_pred HHHHHHHHCCCCEEEc-Ccccccc---cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 66 EDFKFLSSNGINAVRI-PVGWWIA---NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 66 ~d~~~i~~~G~N~VRl-pi~~~~~---~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
+-++.|+++|+|+|-| |+.-... -.+......++ +..+.++++|+.|+++||+||+|+
T Consensus 27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~ 90 (391)
T d1lwha2 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (391)
T ss_dssp HTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeecc
Confidence 3478999999999998 4421000 00100001112 468999999999999999999998
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=95.08 E-value=0.012 Score=52.70 Aligned_cols=58 Identities=22% Similarity=0.287 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCCCEEEcC-cccccccCC-----CCCCCcc----------cchHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIP-VGWWIANDP-----TPPKPFV----------GGSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlp-i~~~~~~~~-----~~~~~~~----------~~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-|+.|+++|+|+|=|. |. ...... .....|. =+..+.++++|+.|+++||+||||+
T Consensus 55 ~~kLdyl~~LGv~~I~L~Pi~-~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 55 RQKLPYLKQLGVTTIWLSPVL-DNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HHTHHHHHHHTCCEEEECCCE-EECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccc-cCCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 345789999999999983 31 100000 0000111 1468999999999999999999997
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=95.02 E-value=0.5 Score=41.22 Aligned_cols=178 Identities=12% Similarity=0.070 Sum_probs=97.2
Q ss_pred chHHHHHHHHHHHHHcCCeEEEecCCC-CCCCCCCCCCCCCCCccCCc--hhHHHHHHHH---HHHHHHHhCCCC---ce
Q 019395 100 GSSKVLDNAFDWAEKYGVKVIVDLHAA-PGSQNGNEHSATRDGFQEWG--DSNVADTVAV---IDFLAARYANRP---SL 170 (341)
Q Consensus 100 ~~l~~ld~~i~~a~~~gi~vildlh~~-~g~~~~~~~~g~~~~~~~w~--~~~~~~~~~~---~~~la~~y~~~~---~v 170 (341)
..++.+.+.+..+.++|--|.+..|-. |.....+...... -..... ....+.+..+ +..++...++.. ..
T Consensus 85 ~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~-~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~~VP 163 (366)
T d2bvya2 85 ENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGD-TLRAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIP 163 (366)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTC-HHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCC
T ss_pred hhHHHHHHHHHHhhccCCEEEEEEecCCCCCCCcccCCchh-HHHHhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 356777778888888899999999954 2221111110000 000000 1223344444 444455666532 12
Q ss_pred eEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhc-CCCceEEEeCCCC--CCChhhhhhccCCCC-cEEEEeee
Q 019395 171 AAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLG--PADHKELLSFASGLS-RVVIDVHY 239 (341)
Q Consensus 171 ~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~-~p~~~v~~~~~~~--~~~~~~~~~~~~~~~-~~v~~~H~ 239 (341)
+.|-++.|.++. ..++++++++++.+++.+|+. +-+.+|.+=+... ......++...++++ =.++.+-.
T Consensus 164 Vl~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG~D~ 243 (366)
T d2bvya2 164 IVFRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 243 (366)
T ss_dssp EEEECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred EEEeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCCCCCeEEEEEEec
Confidence 338899999862 136789999999999999975 4566666643222 122334444433433 35777777
Q ss_pred cCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecCC
Q 019395 240 YNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTCE 286 (341)
Q Consensus 240 Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~~ 286 (341)
|..... ....+.+.. ..+.+..+++..++|+.++|+|..
T Consensus 244 Y~~~~~-------~~~~~~~~~-~l~~~~~~a~~~~Kp~altE~G~~ 282 (366)
T d2bvya2 244 YDSTGS-------DAFLAGLVA-DLRMIAEIADEKGKVSAFTEFGVS 282 (366)
T ss_dssp EESSCC-------HHHHHHHHH-HHHHHHHHHHHHTCEECBCEEEET
T ss_pred cCCCCC-------cchHHHHHH-HHHHHHHHHHhcCCcEEEeceecc
Confidence 854321 111111111 122334445555778999999964
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.79 E-value=0.014 Score=51.97 Aligned_cols=58 Identities=19% Similarity=0.362 Sum_probs=39.6
Q ss_pred HHHHHHHHHCCCCEEEcCccc------------ccccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGW------------WIANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~------------~~~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++-.+.|+++|+++|=|+=.. |..-+|... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 26 ~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY-~v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 26 LECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSY-KLCTRSGNENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCS-CSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCC-ccCCCCCCHHHHHHHHHHHHhcCCEEEEEE
Confidence 334456999999999985321 111112111 1122 468999999999999999999998
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=94.77 E-value=0.018 Score=50.43 Aligned_cols=58 Identities=24% Similarity=0.402 Sum_probs=39.7
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCCCC-------CCCc--------cc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDPTP-------PKPF--------VG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~~~-------~~~~--------~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.++.|+++|+|+|=| ||. ........ ...| ++ +..+.|+++|+.|+++||+||+|+
T Consensus 20 ~~~ldyl~~lGv~aIwl~Pi~-~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~VilD~ 95 (344)
T d1ua7a2 20 KHNMKDIHDAGYTAIQTSPIN-QVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (344)
T ss_dssp HHTHHHHHHTTCSEEEECCCE-EECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhHHHHHHcCCCEEEeCCCe-eCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhcccceeEeecc
Confidence 45578999999999997 342 11000000 0001 11 468999999999999999999998
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.53 E-value=0.022 Score=52.62 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHH-HHcCCeEEEec
Q 019395 101 SSKVLDNAFDWA-EKYGVKVIVDL 123 (341)
Q Consensus 101 ~l~~ld~~i~~a-~~~gi~vildl 123 (341)
.++.++++|+.| +++||+||||+
T Consensus 178 ~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 178 RIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhccCceeeecC
Confidence 478899999876 88999999997
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=93.83 E-value=0.02 Score=50.61 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=39.1
Q ss_pred HHHHH-HHHHCCCCEEEcCccccc----------ccCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFK-FLSSNGINAVRIPVGWWI----------ANDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~-~i~~~G~N~VRlpi~~~~----------~~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
++.+. .|+++|+++|=|+=.... .-++... .+++ +..+.|+++|+.|+++||+||||+
T Consensus 25 ~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY-~id~~~Gt~~df~~LV~~aH~~GI~VilDv 95 (378)
T d1jaea2 25 ADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (378)
T ss_dssp HHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccc-eeCCCCCCHHHHHHHHHHHHhcCceeeeee
Confidence 44555 599999999998421111 1111111 1122 468999999999999999999997
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=93.75 E-value=0.053 Score=50.65 Aligned_cols=59 Identities=12% Similarity=0.227 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEc-Ccccccc-c-----CCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIA-N-----DPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~-~-----~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+-++.|+++|+|+|=| ||.-... . .+......++ +.++.|+++|+.|+++||+||||+
T Consensus 116 ~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~ 183 (554)
T d1g5aa2 116 KDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (554)
T ss_dssp HTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 34478999999999998 4311000 0 0000111222 368999999999999999999998
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=93.16 E-value=2.3 Score=36.57 Aligned_cols=132 Identities=18% Similarity=0.214 Sum_probs=79.8
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCC----------------CCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPT----------------PPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~----------------~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++.++.|+...+|.+-+++.- |.+.-+. +++.| ..+.+.++|+.|+++||.||..+-.
T Consensus 21 ~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~y---T~~di~~iv~ya~~rgI~viPEid~ 97 (356)
T d1jaka1 21 KRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYY---TKAEYKEIVRYAASRHLEVVPEIDM 97 (356)
T ss_dssp HHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCB---CHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCcc---CHHHHHHHHHHHHHcCCeEeecCCC
Confidence 677888899999999887742 2221110 11123 3799999999999999999987643
Q ss_pred CCCCC------------CC---CCCCCCCCCccCCc---hhHHHHHHHHHHHHHHHhCCCCce-eEEEeecCCCCCCCCh
Q 019395 126 APGSQ------------NG---NEHSATRDGFQEWG---DSNVADTVAVIDFLAARYANRPSL-AAIELINEPLAPGVAL 186 (341)
Q Consensus 126 ~~g~~------------~~---~~~~g~~~~~~~w~---~~~~~~~~~~~~~la~~y~~~~~v-~~~el~NEP~~~~~~~ 186 (341)
||.. .+ ...++...+..... +...+-..+++++++.-|.+ +.+ +| .-|.. ....
T Consensus 98 -PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~-~~~HiG---gDE~~--~~~~ 170 (356)
T d1jaka1 98 -PGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPG-RYLHIG---GDEAH--STPK 170 (356)
T ss_dssp -SSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCS-SEEECC---CCCCT--TSCH
T ss_pred -cchhHHHHHhCccccccCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHhccc-cEEEec---ccccc--cchH
Confidence 2210 00 00011111111111 45666666788888887754 222 22 24544 2455
Q ss_pred HHHHHHHHHHHHHHHhcCCC
Q 019395 187 DTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 187 ~~~~~~~~~~~~aIR~~~p~ 206 (341)
+.+..|++++.+.+++.+.+
T Consensus 171 ~~~~~f~~~~~~~v~~~gk~ 190 (356)
T d1jaka1 171 ADFVAFMKRVQPIVAKYGKT 190 (356)
T ss_dssp HHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHcCCc
Confidence 77889999999999987653
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=93.13 E-value=0.063 Score=47.24 Aligned_cols=55 Identities=24% Similarity=0.295 Sum_probs=35.8
Q ss_pred HHHHCCCCEEEc-Ccccccc---cCCCCCCCccc--chHHHHHHHHHHHHHcCCeEEEecC
Q 019395 70 FLSSNGINAVRI-PVGWWIA---NDPTPPKPFVG--GSSKVLDNAFDWAEKYGVKVIVDLH 124 (341)
Q Consensus 70 ~i~~~G~N~VRl-pi~~~~~---~~~~~~~~~~~--~~l~~ld~~i~~a~~~gi~vildlh 124 (341)
.||++|+|+|=| ||.-... -.+......++ +..+.|+++|+.|+++||+||+|+-
T Consensus 43 ~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~V 103 (409)
T d1wzaa2 43 TIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (409)
T ss_dssp CCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEecc
Confidence 358999999998 4421000 00000001111 4689999999999999999999983
|
| >d1odza_ c.1.8.3 (A:) Mannanase A, ManA {Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077]
Probab=92.50 E-value=2.3 Score=37.02 Aligned_cols=173 Identities=12% Similarity=0.077 Sum_probs=90.6
Q ss_pred HHHHHHHHHHcCCeEEEecCCC-CCCCC--CCCCCCCCCC----ccCCc--hhHHHHHHHHHHHHH---HHhCCCC---c
Q 019395 105 LDNAFDWAEKYGVKVIVDLHAA-PGSQN--GNEHSATRDG----FQEWG--DSNVADTVAVIDFLA---ARYANRP---S 169 (341)
Q Consensus 105 ld~~i~~a~~~gi~vildlh~~-~g~~~--~~~~~g~~~~----~~~w~--~~~~~~~~~~~~~la---~~y~~~~---~ 169 (341)
.++++++ .++|--|.+..|-. |.... ++...|.... ...-. ...-+.+...++.+| +++++.. .
T Consensus 84 ~~~~~~~-~~~GgIvt~~WH~~~P~~~~~~~~~~~~~~~d~~~~v~~~lpg~~~~~~~~~~ld~ia~~~~~L~~~~~~~v 162 (381)
T d1odza_ 84 VAQVKKA-YARGGIITVSSHFDNPKTDTQKGVWPVGTSWDQTPAVVDSLPGGAYNPVLNGYLDQVAEWANNLKDEQGRLI 162 (381)
T ss_dssp HHHHHHH-HHTTCEEEEECCCCCTTTGGGCSSTTTTSTTCCSCCSTTTSTTSTTHHHHHHHHHHHHHHHHTCBCTTSCBC
T ss_pred HHHHHHH-HHCCCeEEEEEeeCCCCCCCCCccccCCcccchhhhHhhcCCCCchhHHHHHHHHHHHHHHHHhhhccCCCc
Confidence 3444554 46788889999965 42211 1111111100 00000 123344444444444 4665532 1
Q ss_pred eeEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhc-CCCceEEEeCCCCC--CChhhhhhccCCCC-cEEEEee
Q 019395 170 LAAIELINEPLAP-------GVALDTLKSYYKAGYDAVRKY-TSTAYVIMSNRLGP--ADHKELLSFASGLS-RVVIDVH 238 (341)
Q Consensus 170 v~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~-~p~~~v~~~~~~~~--~~~~~~~~~~~~~~-~~v~~~H 238 (341)
-+.|-++.|.++. ..+++.++++++.+++.+|+. +-+.+|.+=++... .....+....++++ =.++.+-
T Consensus 163 PVl~Rp~hE~nG~WfwWg~~~~~p~~y~~lwr~~~~~l~~~~g~~Nliwv~sp~~~~~~~~~~~~~~YPGDdyVDivG~D 242 (381)
T d1odza_ 163 PVIFRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPNNFWDVTEANYLERYPGDEWVDVLGFD 242 (381)
T ss_dssp CEEEECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBCCSSCCHHHHHSSCCCTTTCSEECCE
T ss_pred cEEEeeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCccccccccCCCCCeEEEEEee
Confidence 2338899998862 235788999999999999976 45666666432221 12233444333333 3577777
Q ss_pred ecCCCCccccCccchhhhHHHHhhhhhhhhhhhccCCCceEEEeecC
Q 019395 239 YYNLFSNNFNGLNVQQNIDYVNNQRASDLGAVTTSNGPLTFVGEWTC 285 (341)
Q Consensus 239 ~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~vGE~g~ 285 (341)
.|.+.... ....+.+. .....+..+++..++|+.++|+|.
T Consensus 243 ~Y~~~~~~------~~~~~~~~-~~l~~~~~~A~~~gKp~altE~G~ 282 (381)
T d1odza_ 243 TYGPVADN------ADWFRNVV-ANAALVARMAEARGKIPVISGIGI 282 (381)
T ss_dssp EEECSSSC------HHHHHHHH-HHHHHHHHHHHHHTCEECBCEEEE
T ss_pred ccCCCCCc------hhHHHHHH-HHHHHHHHHHHhcCCceeeeeccc
Confidence 78543211 11112221 122334455666678899999996
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=91.58 E-value=3.5 Score=35.02 Aligned_cols=141 Identities=13% Similarity=0.096 Sum_probs=82.7
Q ss_pred HHHHHHHHHCCCCEEEcCccc---ccccCCC-C----------C----CCcccc---hHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGW---WIANDPT-P----------P----KPFVGG---SSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~---~~~~~~~-~----------~----~~~~~~---~l~~ld~~i~~a~~~gi~vildl 123 (341)
++.++.|+..++|.+-+++.- |.+.-+. + . .++... .-+.++++|+.|+++||.||..+
T Consensus 21 k~~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt~~e~~~lv~yA~~rgI~viPei 100 (344)
T d1yhta1 21 KSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPEL 100 (344)
T ss_dssp HHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCCCCCCcccCHHHHHHHHHHHHHcCCEEEecc
Confidence 778889999999998776531 1121110 0 0 011111 46889999999999999999866
Q ss_pred CCCCCCCCCC--------------C-CCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChH
Q 019395 124 HAAPGSQNGN--------------E-HSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALD 187 (341)
Q Consensus 124 h~~~g~~~~~--------------~-~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~ 187 (341)
-.. |..... . ..+...+...-. +...+-..++++++++.|.+....+-+. .-|.........
T Consensus 101 D~P-GH~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~F~~~~~~~HiG-gDE~~~~~~~~~ 178 (344)
T d1yhta1 101 DSP-NHMTAIFKLVQKDRGVKYLQGLKSRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIG-GDEFGYSVESNH 178 (344)
T ss_dssp EES-SSCHHHHHHHHHHHCHHHHHHHBCSSCTTSBCTTCHHHHHHHHHHHHHHHHHHGGGCSEEEEE-CCSCCTTSCCHH
T ss_pred chh-hHHHHHHHhchhhcCCCCccCCCCCCCCCcccCCCchhHHHHHHHHHHHHHhcCCccceEEee-chhhhcccccch
Confidence 422 210000 0 000000111111 5566667788899999886532322121 266654445567
Q ss_pred HHHHHHHHHHHHHHhcCCCc
Q 019395 188 TLKSYYKAGYDAVRKYTSTA 207 (341)
Q Consensus 188 ~~~~~~~~~~~aIR~~~p~~ 207 (341)
.+..++.++.+.+++.+...
T Consensus 179 ~~~~~~~~~~~~~~~~Gk~~ 198 (344)
T d1yhta1 179 EFITYANKLSYFLEKKGLKT 198 (344)
T ss_dssp HHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHCCCEE
Confidence 78899999999999987643
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=91.39 E-value=0.13 Score=48.70 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=40.1
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCC--CCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTP--PKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~--~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
.+.+.+|+++|+++|=|+=-+.. ..... ... +++ +..+.++++|+.|+++||+||+|+
T Consensus 20 ~~~LpYL~~LGVs~IyLsPi~~a-~~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDi 86 (653)
T d1iv8a2 20 IDNLWYFKDLGVSHLYLSPVLMA-SPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDI 86 (653)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE-CTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECccCCC-CCCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 56688999999999988421111 00010 011 112 468999999999999999999996
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=89.58 E-value=0.16 Score=41.70 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=35.8
Q ss_pred HHHHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCC
Q 019395 65 DEDFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHA 125 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~ 125 (341)
++.++.+++.||+.|=.++.- +.. -.+...+++++++++|+++||+||+|+-.
T Consensus 20 ~~yi~~a~~~Gf~~iFTSL~~-----~e~---~~~~~~~~~~~l~~~a~~~g~~vi~DIsp 72 (244)
T d1x7fa2 20 MAYISAAARHGFSRIFTCLLS-----VNR---PKEEIVAEFKEIINHAKDNNMEVILDVAP 72 (244)
T ss_dssp HHHHHHHHTTTEEEEEEEECC-----C-----------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEecCcc-----CCC---CHHHHHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 456777788899876655421 211 11346799999999999999999999864
|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAI [TaxId: 2026]
Probab=87.31 E-value=0.39 Score=42.33 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=37.4
Q ss_pred HHHHHHHHH-CCCCEEEcC-cccccccCCCC--CCC-----ccc--chHHHHHHHHHHHHHcC----CeEEEec
Q 019395 65 DEDFKFLSS-NGINAVRIP-VGWWIANDPTP--PKP-----FVG--GSSKVLDNAFDWAEKYG----VKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~-~G~N~VRlp-i~~~~~~~~~~--~~~-----~~~--~~l~~ld~~i~~a~~~g----i~vildl 123 (341)
.+-++.|++ +|+|+|-|. |. ..+.. ..+ .++ +..+.++++|+.|+++| |+||||+
T Consensus 72 ~~kLdYl~~~LGv~~I~L~Pi~----~~~~~~GY~~~d~~~id~~~Gt~~d~~~lv~~~H~~g~~~~I~VilD~ 141 (432)
T d1ji1a3 72 DQKLGYIKKTLGANILYLNPIF----KAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDG 141 (432)
T ss_dssp HHTHHHHHTTTCCCEEEESCCE----ECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HHHhhHHHhhcCCCEEEeCCCC----cCCCCCCcccccccccCcccCCHHHHHHHHHHHHHhhhhcceeEeccc
Confidence 345788986 999999983 31 11110 000 111 35889999999999987 7899997
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=87.18 E-value=3.6 Score=35.22 Aligned_cols=135 Identities=10% Similarity=-0.036 Sum_probs=75.1
Q ss_pred CHHHHHHHHHCCCCEEEcCcccc---cccCCCCCCCcc----cchHHHHHHHHHHHHHcCCeEEEecCCCCC-CCCCCC-
Q 019395 64 TDEDFKFLSSNGINAVRIPVGWW---IANDPTPPKPFV----GGSSKVLDNAFDWAEKYGVKVIVDLHAAPG-SQNGNE- 134 (341)
Q Consensus 64 ~e~d~~~i~~~G~N~VRlpi~~~---~~~~~~~~~~~~----~~~l~~ld~~i~~a~~~gi~vildlh~~~g-~~~~~~- 134 (341)
.++-++.+|++|++.|=|---.- ..- ++...+++ ...-+.|.++++.|+++||++-|-+|.... ......
T Consensus 101 a~~Wv~~ak~aGaky~vlTaKHHDGF~Lw-~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~G~YyS~~~dw~~~~~~~ 179 (350)
T d1hl9a2 101 PQEWADLFKKAGAKYVIPTTKHHDGFCLW-GTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLDWRFTTEPI 179 (350)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSS-CCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEECEEECCSCCTTSCCSCC
T ss_pred HHHHHHHHHHcCCCEEEEEEEecCCcccC-CCCCCCCCCcCCCCCCchHHHHHHHHHhcCCceeEEeccccccccccCCC
Confidence 47778888999999998832110 000 11112221 123578999999999999999998874311 100000
Q ss_pred CCCC-CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCceE
Q 019395 135 HSAT-RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVALDTLKSYYKAGYDAVRKYTSTAYV 209 (341)
Q Consensus 135 ~~g~-~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~v 209 (341)
.... ........+.+.+.+..-+++|.++|. |.++-|+-.-+.. .... .+++++.||+..|+.+|
T Consensus 180 ~~~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~--p~~~w~D~~~~~~----~~~~----~~~~~~~i~~~qp~~~i 245 (350)
T d1hl9a2 180 RYPEDLSYIRPNTYEYADYAYKQVMELVDLYL--PDVLWNDMGWPEK----GKED----LKYLFAYYYNKHPEGSV 245 (350)
T ss_dssp CSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHC--CSCEEECSCCCGG----GTTH----HHHHHHHHHHHCTTCCB
T ss_pred CCcchhcccCccchHHHHHHHHHHHHHHhccC--CceEEeccccccc----chhh----HHHHHHHHHHhCCCCcc
Confidence 0000 000000114566777788899999996 3333355321111 1122 34577888888887644
|
| >d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Hypothetical protein IolI species: Bacillus subtilis [TaxId: 1423]
Probab=87.17 E-value=2.6 Score=34.33 Aligned_cols=118 Identities=13% Similarity=0.126 Sum_probs=70.4
Q ss_pred cchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeec
Q 019395 99 GGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELIN 177 (341)
Q Consensus 99 ~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~N 177 (341)
+..++.+++.++.|++.|...|+-...... .... ....+..++.++.+++.-+...-.+++|.+|
T Consensus 80 ~~~~~~~~~~i~~a~~lG~~~i~~~~~~~~--------------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 145 (278)
T d1i60a_ 80 NEIITEFKGMMETCKTLGVKYVVAVPLVTE--------------QKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVG 145 (278)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEECCBCS--------------SCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHcCCCccccccccCC--------------CCCCHHHHHHHHHHHHHHHHHHHHHhCCeeeeeecc
Confidence 457899999999999999998764322110 0011 3566778888888888777766668888776
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcC-CCceEEEeCC---CCCCChhhhhhccCCCCcEEEEeeec
Q 019395 178 EPLAPGVALDTLKSYYKAGYDAVRKYT-STAYVIMSNR---LGPADHKELLSFASGLSRVVIDVHYY 240 (341)
Q Consensus 178 EP~~~~~~~~~~~~~~~~~~~aIR~~~-p~~~v~~~~~---~~~~~~~~~~~~~~~~~~~v~~~H~Y 240 (341)
-|...-. -..++.+.+++++ |+.-+.+..+ ....++..+... ...-+..+|.=
T Consensus 146 ~~~~~~~-------~~~~~~~ll~~v~~~~vg~~~D~~h~~~~~~~~~~~~~~---~~~~i~~vHl~ 202 (278)
T d1i60a_ 146 HPQCTVN-------TFEQAYEIVNTVNRDNVGLVLDSFHFHAMGSNIESLKQA---DGKKIFIYHID 202 (278)
T ss_dssp CTTBSSC-------SHHHHHHHHHHHCCTTEEEEEEHHHHHHTTCCHHHHHTS---CGGGEEEEEEC
T ss_pred ccccccC-------CHHHHHHHHHHhhcccccccccchhhhcCCCCHHHHHHh---ccccceEEEEe
Confidence 6543111 1234566777876 4555665532 122344444433 22234556753
|
| >d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Radical SAM enzymes family: Oxygen-independent coproporphyrinogen III oxidase HemN domain: Oxygen-independent coproporphyrinogen III oxidase HemN species: Escherichia coli [TaxId: 562]
Probab=87.14 E-value=1.5 Score=38.94 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=78.6
Q ss_pred ccCHHHHHHHHHCCCCEEEcCcccccccCCCCCCCc-ccchHHHHHHHHHHHHHcCCe-EEEec-CCCCCCCCCCCCCCC
Q 019395 62 YITDEDFKFLSSNGINAVRIPVGWWIANDPTPPKPF-VGGSSKVLDNAFDWAEKYGVK-VIVDL-HAAPGSQNGNEHSAT 138 (341)
Q Consensus 62 ~~~e~d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~-~~~~l~~ld~~i~~a~~~gi~-vildl-h~~~g~~~~~~~~g~ 138 (341)
.++++.++.|+++|+|-|=|+|- .+ ++.--... .....+.+.++|+.+++.|+. |-+|| .+.||
T Consensus 147 ~~~~~~l~~l~~~G~nRiSlGvQ--s~-~~~vl~~i~R~~~~~~~~~~~~~~r~~g~~~vn~DLI~GlPg---------- 213 (441)
T d1olta_ 147 EIELDVLDHLRAEGFNRLSMGVQ--DF-NKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPK---------- 213 (441)
T ss_dssp SCCTHHHHHHHHTTCCEEEEEEE--CC-CHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEESCTT----------
T ss_pred ccchHHHHHHHHhCCceEEecch--hc-chhhhhhhhcCCCHHHHHHHHHHHHhcccceeecccccccCC----------
Confidence 35789999999999998777662 11 11000000 012457788999999999996 89998 46664
Q ss_pred CCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCCC
Q 019395 139 RDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEPLAP----------GVALDTLKSYYKAGYDAVRKYTST 206 (341)
Q Consensus 139 ~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~ 206 (341)
.+.+.+.+-++.+.+- +-+.|..|.+.=+|... -.+.+....+++.+.+.+++.+=.
T Consensus 214 ---------qT~~~~~~tl~~~~~l--~pd~is~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~~~~~L~~~GY~ 280 (441)
T d1olta_ 214 ---------QTPESFAFTLKRVAEL--NPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQ 280 (441)
T ss_dssp ---------CCHHHHHHHHHHHHHH--CCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ---------cchHHHHHHHHHHHhh--CCCccccccceeccchhHhhhhccccchhhhHHHHHHHHHHHHHHHHcCch
Confidence 3345666666666553 33456667777777641 124566778888888888887653
|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]
Probab=86.31 E-value=2.1 Score=35.47 Aligned_cols=98 Identities=10% Similarity=0.045 Sum_probs=60.4
Q ss_pred chHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCchhHHHHHHHHHHHHHHHhCCCCceeEEEeecCC
Q 019395 100 GSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWGDSNVADTVAVIDFLAARYANRPSLAAIELINEP 179 (341)
Q Consensus 100 ~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP 179 (341)
..++..+..|+.|+++|++|+|.+-+..++. + .....+...+.|++-+..+.++|. +-|+++-=|-
T Consensus 64 ~~~~~~~~~i~~~q~~g~KvllsigG~~~~~-~---------~~~~~~~~~~~F~~~~~~~~~~y~----lDGiDiD~Ey 129 (285)
T d2ebna_ 64 HLLTNRAKYLKPLQDKGIKVILSILGNHDRS-G---------IANLSTARAKAFAQELKNTCDLYN----LDGVFFDDEY 129 (285)
T ss_dssp HHHHTHHHHTHHHHHTTCEEEEEEECCSSSC-C---------TTCBCHHHHHHHHHHHHHHHHHHT----CCEEEEECCS
T ss_pred hhhhhHHHHHHHHHhCCCEEEEEeccCCCCc-c---------cccCCHHHHHHHHHHHHHHHHHcC----CcEEeccccC
Confidence 3566677888999999999999996542221 0 111124566778888888888884 4455555552
Q ss_pred C-CC-----CCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 180 L-AP-----GVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 180 ~-~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
. .. +.. ..-...+..+++.+|+.-|+.+|.+.
T Consensus 130 ~~~~~~~~~~~~-~~~~~~~~~li~eLr~~~~~~~lt~a 167 (285)
T d2ebna_ 130 SAYQTPPPSGFV-TPSNNAAARLAYETKQAMPNKLVTVY 167 (285)
T ss_dssp CCCCSSCCTTBC-CCCHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred ccccCCCccccC-cchHHHHHHHHHHHHHHCCCCeEEEE
Confidence 1 10 111 12234455567778888888777665
|
| >d1w0ma_ c.1.1.1 (A:) Triosephosphate isomerase {Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Triosephosphate isomerase (TIM) family: Triosephosphate isomerase (TIM) domain: Triosephosphate isomerase species: Thermoproteus tenax [TaxId: 2271]
Probab=85.18 E-value=4.8 Score=31.97 Aligned_cols=106 Identities=16% Similarity=0.067 Sum_probs=63.1
Q ss_pred HHHHHHHCCCCEEEcCcccccccCCCCCCCcccchHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc
Q 019395 67 DFKFLSSNGINAVRIPVGWWIANDPTPPKPFVGGSSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG 146 (341)
Q Consensus 67 d~~~i~~~G~N~VRlpi~~~~~~~~~~~~~~~~~~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~ 146 (341)
..+.+++.|.+.+=+..+ + . ...+..+++.++.|.++||.||+..+..
T Consensus 77 s~~~l~~~g~~~viigHs-----E--r-----R~~~~e~~~~~~~~~~~gl~~ivcvge~-------------------- 124 (226)
T d1w0ma_ 77 SLENIKEAGGSGVILNHS-----E--A-----PLKLNDLARLVAKAKSLGLDVVVCAPDP-------------------- 124 (226)
T ss_dssp BHHHHHHHTCCEEEECCT-----T--S-----CCBHHHHHHHHHHHHHTTCEEEEEESSH--------------------
T ss_pred eHhhhcccccceEEeech-----h--h-----hhhccchHHHHHHHHHcCCEEEEecCch--------------------
Confidence 345566777776644221 0 0 1246778999999999999999987642
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCceeEEEeecCCCCCCCCh-HHHHHHHHHHHHHHHhcCCCceEEEeCCCC
Q 019395 147 DSNVADTVAVIDFLAARYANRPSLAAIELINEPLAPGVAL-DTLKSYYKAGYDAVRKYTSTAYVIMSNRLG 216 (341)
Q Consensus 147 ~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~-~~~~~~~~~~~~aIR~~~p~~~v~~~~~~~ 216 (341)
... +... +..+.+++||...=- +.+... ..-..-....++.+++..++.+|+++++-.
T Consensus 125 -~~~-------~~~~---~~~~~iIayep~waI-Gtg~~~~~~~~~~i~~~i~~~~~~~~~i~vlygGgV~ 183 (226)
T d1w0ma_ 125 -RTS-------LAAA---ALGPHAVAVEPPELI-GTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIE 183 (226)
T ss_dssp -HHH-------HHHH---HTCCSEEEECCGGGT-TTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCC
T ss_pred -HHh-------hhhh---ccccceeeecchhhc-cCCCCCChhhhhHhhhhhhhhhccCCCceEEEecCcC
Confidence 000 1111 234567777655422 112221 122334556677888899999999986554
|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Type II chitinase domain: Endo-beta-N-acetylglucosaminidase species: Streptomyces plicatus, endoglycosidase H [TaxId: 1922]
Probab=83.36 E-value=3.8 Score=33.56 Aligned_cols=94 Identities=11% Similarity=0.103 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCCCCCCCccCCc-hhHHHHHHHHHHHHHHHhCCCCceeEEEeecC-
Q 019395 101 SSKVLDNAFDWAEKYGVKVIVDLHAAPGSQNGNEHSATRDGFQEWG-DSNVADTVAVIDFLAARYANRPSLAAIELINE- 178 (341)
Q Consensus 101 ~l~~ld~~i~~a~~~gi~vildlh~~~g~~~~~~~~g~~~~~~~w~-~~~~~~~~~~~~~la~~y~~~~~v~~~el~NE- 178 (341)
.+......|+.|+++|++|+|.+-+..++. ++. ... +...+.|++-+..+.++|+ +-|+++-=|
T Consensus 63 ~~~~~~~~i~~l~~~g~KvllsiGG~~~~~-~f~---------~~~s~~~~~~Fa~~~~~~~~~~~----~DGiDiD~Ey 128 (265)
T d1edta_ 63 VLDNAVTQIRPLQQQGIKVLLSVLGNHQGA-GFA---------NFPSQQAASAFAKQLSDAVAKYG----LDGVDFDDEY 128 (265)
T ss_dssp HHHTHHHHTHHHHHTTCEEEEEEEECTTSC-CTT---------CCSSHHHHHHHHHHHHHHHHHHT----CCEEEEECSS
T ss_pred hhhhHHHHHHHHHhCCCEEEEEEccCcCCC-Cce---------ecCCHHHHHHHHHHHHHHHHhcC----CCceEecccc
Confidence 355666778899999999999986643221 110 111 4566778888888888884 445555555
Q ss_pred CCC-----CCCChHHHHHHHHHHHHHHHhcCCCceEEEe
Q 019395 179 PLA-----PGVALDTLKSYYKAGYDAVRKYTSTAYVIMS 212 (341)
Q Consensus 179 P~~-----~~~~~~~~~~~~~~~~~aIR~~~p~~~v~~~ 212 (341)
|.. +..+.+ -+..+++++|+.-|+.+|.+-
T Consensus 129 p~~~~~~~~~~d~~----~~~~ll~~lR~~l~~~~is~a 163 (265)
T d1edta_ 129 AEYGNNGTAQPNDS----SFVHLVTALRANMPDKIISLY 163 (265)
T ss_dssp CCTTGGGCCCCCSS----HHHHHHHHHHHHCTTSEEEEE
T ss_pred CcccCCCCCcccHH----HHHHHHHHHHHhhhhcEEEEE
Confidence 211 111222 345567778888888777764
|
| >d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Xylose isomerase-like family: IolI-like domain: Putative cytoplasmic protein STM4435 species: Salmonella typhimurium [TaxId: 90371]
Probab=82.13 E-value=9.6 Score=30.52 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHHcCCeEEE
Q 019395 100 GSSKVLDNAFDWAEKYGVKVIV 121 (341)
Q Consensus 100 ~~l~~ld~~i~~a~~~gi~vil 121 (341)
+..+.++++++.|++.|...|+
T Consensus 81 ~~~~~~~~~i~~a~~lG~~~v~ 102 (271)
T d2q02a1 81 EVVKKTEGLLRDAQGVGARALV 102 (271)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEE
Confidence 3456666667777777766554
|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Sucrose phosphorylase species: Bifidobacterium adolescentis [TaxId: 1680]
Probab=81.57 E-value=0.91 Score=38.84 Aligned_cols=52 Identities=17% Similarity=0.126 Sum_probs=31.7
Q ss_pred HHHHHHHHHCCCCEEEc-CcccccccCCCC--CCC-----ccc--chHHHHHHHHHHHHHcCCeEEEec
Q 019395 65 DEDFKFLSSNGINAVRI-PVGWWIANDPTP--PKP-----FVG--GSSKVLDNAFDWAEKYGVKVIVDL 123 (341)
Q Consensus 65 e~d~~~i~~~G~N~VRl-pi~~~~~~~~~~--~~~-----~~~--~~l~~ld~~i~~a~~~gi~vildl 123 (341)
-+-|+.|+++|+|+|=| ||. ....... ..+ .++ +..+.|+++ ++||+||||+
T Consensus 23 ~~~Ldyl~~LGv~~I~L~Pi~--~~~~~~d~GY~~~Dy~~vdp~~Gt~~d~k~L-----~rGi~VIlDv 84 (434)
T d1r7aa2 23 TDILRTRFDGVYDGVHILPFF--TPFDGADAGFDPIDHTKVDERLGSWDDVAEL-----SKTHNIMVDA 84 (434)
T ss_dssp HHHHHHHSTTTCCEEEECCCE--ECSSSSSTTSSCSEEEEECTTTCCHHHHHHH-----HTTSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCC--CCCCCCCCCcCcccccccCcccCCHHHHHHH-----HhCCeeeEEe
Confidence 45688999999999999 331 1000000 001 111 246666666 4799999998
|