Citrus Sinensis ID: 019411

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-
Protein Sequence
MVSADTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWKEEEEYEEDG
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEEEEcccccccccccccccccHHHHHHHHcccccEEEEEEccccEEEEEEcccEEEEEccEEEEEccHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccccccccccccccHHHHHHHHHHHHccccccccEEEEcccccccccEEEccccccccccccccEEEEEEccccHHHHcccccccccccccHHcccccccccccccccccccccccccccccccccEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHccccEEEcccccccccccccccccccHHHccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccccccHHEEEEEEccccccccccccccccccHHHHHHHHHHccEEEEEEEccccccEEEEEcccEEEcccEEEEEcccHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEccccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHcccccccHHHHHHHcccHHcccccEEcccccccccccccccccccEEEEEEccccccEEEEEEEcccccccccHHHHHHHHHHHHccccEEEEEEEcccccccHcHHHHEEEEcccccccccccEEEcccccHHHHccc
Coil and Loop (DISEMBL)
MVSADTTMAVSAIGFEGYEKRleisffepsmfvdpegkglrRLTKAQLDeilgpaectivsslsndevdsyvlsesslFVYSYKIIIKTCgttklllsippILKLAETLSLNVRSvrytrgsfifpgnqlyphrnfseEVAVLDSYFGklvsgsnayiiggsgkpqkwhvysasaeplissdpvftIEMCLTGLDREMASVFYKtqsgsagamtvnsgirkilpdskicdfefdpcgysmnsvegaaistvhvtpedgfsyasfetvgydpndvnlNQLVERVLAcfqprdfsIAVHAEVAGKMIEQKCLLNKFVktegngsprstlkCYWKEEEEYEEDG
Flexible Loop (DISEMBL)
mvsadttmavsaigfegyEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSfifpgnqlyphRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAeplissdpVFTIEMCLTGLDREMASVFYKTqsgsagamtvNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNkfvktegngsprstlkcywkeeeeyeedg
Low Complexity Region (SEG)
MVSADTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGttklllsippilklAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWKeeeeyeeDG
Disordered region (IsUnstruct)
********AVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKT***********C************
Disordered Region (DISOPRED)
***********AIGFEGYEKRLEISFFEPS*********LRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCY***********
Disordered Region (DISEMBL)
********AVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWK*********
Disordered Region (DISPRO)
************IGFEGYEKRLEISFFEPSMF****GKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWKEE*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSADTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWKEEEEYEEDG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	341	2.2.26 [Sep-21-2011]
Q9M4D8	353	S-adenosylmethionine deca	N/A	no	0.967	0.934	0.694	1e-143
O04009	361	S-adenosylmethionine deca	N/A	no	0.958	0.905	0.7	1e-141
O80402	361	S-adenosylmethionine deca	N/A	no	0.958	0.905	0.7	1e-141
Q43820	353	S-adenosylmethionine deca	N/A	no	0.967	0.934	0.686	1e-141
P46255	363	S-adenosylmethionine deca	N/A	no	0.973	0.914	0.666	1e-138
Q96555	362	S-adenosylmethionine deca	N/A	no	0.950	0.895	0.694	1e-138
Q42679	357	S-adenosylmethionine deca	N/A	no	0.976	0.932	0.674	1e-137
Q04694	360	S-adenosylmethionine deca	N/A	no	0.950	0.9	0.682	1e-136
Q38IY3	358	S-adenosylmethionine deca	N/A	no	0.950	0.905	0.685	1e-136
Q9AXE3	361	S-adenosylmethionine deca	N/A	no	0.944	0.891	0.687	1e-135

>sp|Q9M4D8|DCAM_VICFA S-adenosylmethionine decarboxylase proenzyme OS=Vicia faba GN=SAMDC PE=2 SV=1

 Score =  508 bits (1307), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/354 (69%), Positives = 290/354 (81%), Gaps = 24/354 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MAVSAIGFEG+EKRLEISF +P +F DP+G+GLR LTK+QLDEIL PAECTIVSSL+N++
Sbjct: 1   MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANED 60

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY+YKIIIKTCGTTKLLL+IPPILKLAE++SL+VR+VRYTRGSFIFPG
Sbjct: 61  VDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKLAESISLDVRAVRYTRGSFIFPG 120

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHR+FSEEVAVLD +FGKL SGS AYI+GGS + Q WHVY ASA+ +  +D V+T+
Sbjct: 121 AQSFPHRHFSEEVAVLDGFFGKLGSGSKAYIMGGSDEAQNWHVYCASADSVSPADSVYTL 180

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE ASVF+K Q+GSA  MTVNSGIRKILP+S+ICDF+F+PCGYSMNSVEG A
Sbjct: 181 EMCMTGLDREKASVFFKQQTGSAAEMTVNSGIRKILPNSEICDFDFEPCGYSMNSVEGPA 240

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+H+TPEDGFSYASFET GYD   +NLN++V RVLACFQP +FS+AVH + A K  EQ
Sbjct: 241 VSTIHITPEDGFSYASFETAGYDLKAMNLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQ 300

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYE 338
            CLL+                       KFVK    GSPRSTLKC WK+E+E E
Sbjct: 301 GCLLDVKGYCCDEKSHQGLGMSGSVVYQKFVKASDCGSPRSTLKC-WKDEDEEE 353

Vicia faba (taxid: 3906)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 5EC: 0

>sp|O04009|DCAM_TOBAC S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1

 Score =  501 bits (1291), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/350 (70%), Positives = 281/350 (80%), Gaps = 23/350 (6%)

Query: 5   DTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLS 64
           D+ + VSAIGFEG+EKRLEISFFEP +F DP GKGLR L+KAQLDEILGPAECTIV SLS
Sbjct: 2   DSALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLS 61

Query: 65  NDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFI 124
           ND+VDSYVLSESSLFVYSYKIIIKTCGTTKLLL+IPPILKLAETLSL V+ VRYTRGSFI
Sbjct: 62  NDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFI 121

Query: 125 FPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPV 184
           FPG Q +PHR+FSEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV
Sbjct: 122 FPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPV 181

Query: 185 FTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVE 244
           +T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+E
Sbjct: 182 YTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIE 241

Query: 245 GAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKM 304
           GAA+ST+H+TPEDGFSYASFE VGYD   + L  LVERVLACF+P +FSIA+HA+VA K+
Sbjct: 242 GAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKL 301

Query: 305 IEQKC-----------------------LLNKFVKTEGNGSPRSTLKCYW 331
           +E+ C                       +  KF +T   GSP+S LK  W
Sbjct: 302 LERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351

Nicotiana tabacum (taxid: 4097)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|O80402|DCAM_NICSY S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1

 Score =  501 bits (1291), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 245/350 (70%), Positives = 280/350 (80%), Gaps = 23/350 (6%)

Query: 5   DTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLS 64
           D  + VSAIGFEG+EKRLEISFFEP +F DP GKGLR L+KAQLDEILGPAECTIV SLS
Sbjct: 2   DMALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDSLS 61

Query: 65  NDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFI 124
           ND+VDSYVLSESSLFVYSYKIIIKTCGTTKLLL+IPPILKLAETLSL V+ VRYTRGSFI
Sbjct: 62  NDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFI 121

Query: 125 FPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPV 184
           FPG Q +PHR+FSEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV
Sbjct: 122 FPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPV 181

Query: 185 FTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVE 244
           +T+EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+E
Sbjct: 182 YTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIE 241

Query: 245 GAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKM 304
           GAA+ST+H+TPEDGFSYASFE VGYD   + L  LVERVLACF+P +FSIA+HA+VA K+
Sbjct: 242 GAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKL 301

Query: 305 IEQKC-----------------------LLNKFVKTEGNGSPRSTLKCYW 331
           +E+ C                       +  KF +T   GSP+S LK  W
Sbjct: 302 LERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351

Nicotiana sylvestris (taxid: 4096)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q43820|DCAM_PEA S-adenosylmethionine decarboxylase proenzyme OS=Pisum sativum GN=SAMDC PE=2 SV=1

 Score =  501 bits (1290), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/354 (68%), Positives = 289/354 (81%), Gaps = 24/354 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MAVSAIGFEG+EKRLEISF +P +F DP+G+GLR LTK+QLDEIL PAECTIVSSL+N++
Sbjct: 1   MAVSAIGFEGFEKRLEISFSDPGLFSDPQGRGLRSLTKSQLDEILAPAECTIVSSLANED 60

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY+YK+IIKTCGTTKLLLSIPPILKLA+++SLNVRSVRYTRGSFIFPG
Sbjct: 61  VDSYVLSESSLFVYAYKLIIKTCGTTKLLLSIPPILKLADSISLNVRSVRYTRGSFIFPG 120

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHR+FSEEVAVLD +FGKL SGS AYI+GGS + Q WH+Y AS++ +     V+T+
Sbjct: 121 AQSFPHRHFSEEVAVLDGFFGKLGSGSMAYILGGSDEAQNWHIYCASSDSVSPEGSVYTL 180

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE ASVF+K Q+GSA  MTVNSGIRKIL +S+ICDF+F+PCGYSMNSVEG+A
Sbjct: 181 EMCMTGLDREKASVFFKEQTGSAAEMTVNSGIRKILRNSEICDFDFEPCGYSMNSVEGSA 240

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+H+TPEDGFSYASFET GYD   +NLN++V RVLACFQP +FS+AVH + A K  EQ
Sbjct: 241 VSTIHITPEDGFSYASFETAGYDLKAINLNEMVMRVLACFQPTEFSVAVHVDNASKSFEQ 300

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYE 338
            CLL+                       KF+KT   GSPRSTLKC WK+E+E E
Sbjct: 301 GCLLDVKGYCCEEKSHQGLGMSGSVVYQKFLKTSYCGSPRSTLKC-WKDEDEEE 353

Pisum sativum (taxid: 3888)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|P46255|DCAM_SPIOL S-adenosylmethionine decarboxylase proenzyme OS=Spinacia oleracea GN=SAMDC PE=2 SV=1

 Score =  492 bits (1267), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 240/360 (66%), Positives = 285/360 (79%), Gaps = 28/360 (7%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MA+SAIGFEG+EKRLEI+FFEPS+FVDPEGKGLR L KAQLDEILGPAECTIV SL+N+ 
Sbjct: 1   MAISAIGFEGFEKRLEITFFEPSIFVDPEGKGLRALCKAQLDEILGPAECTIVDSLANES 60

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLF+Y+YKIIIKTCGTTKLL +IPPIL+LA  LSL+V+SVRYTRGSFIFPG
Sbjct: 61  VDSYVLSESSLFIYAYKIIIKTCGTTKLLRAIPPILRLAGKLSLDVKSVRYTRGSFIFPG 120

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q Y HR+FSEEVAVLD YFGKL +GS A+++G   KPQKWHVYSASAE +   +PV+T+
Sbjct: 121 AQSYAHRSFSEEVAVLDGYFGKLAAGSKAFVMGDPAKPQKWHVYSASAETISFEEPVYTL 180

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGL +E ASVF+K+QS +A  MT +SGIRKILPDSKICDF+F+PCGYSMN++EG A
Sbjct: 181 EMCMTGLKKEKASVFFKSQSPNAAVMTESSGIRKILPDSKICDFDFEPCGYSMNAIEGPA 240

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           IST+H+TPEDGFSYASFE VGYD    +LNQLVERVLACF+P +FSIA+HAE+A   +E 
Sbjct: 241 ISTIHITPEDGFSYASFEAVGYDLKKTDLNQLVERVLACFEPSEFSIAIHAEIAANSMEH 300

Query: 308 KCLLN------------------------KFVK-TEGNGS---PRSTLKCYWKEEEEYEE 339
            C +N                        KF K + G G+   P+  LKC WKE++  EE
Sbjct: 301 NCYVNVNGYSREEGGIEELGFGAASVFYQKFCKASTGFGATNKPKPALKCCWKEDKFEEE 360

Spinacia oleracea (taxid: 3562)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q96555|DCAM_DATST S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1

 Score =  491 bits (1263), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 241/347 (69%), Positives = 278/347 (80%), Gaps = 23/347 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LSND 
Sbjct: 5   LPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDY 64

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVYSYKIIIKTCGTTKLLL+IPPIL+LAETLSL V+ VRYTRGSFIFPG
Sbjct: 65  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 124

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHR+FSEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA P+ S+DPV+T+
Sbjct: 125 AQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGPVQSNDPVYTL 184

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP+S+ICDFEF+PCGYSMNS+EGAA
Sbjct: 185 EMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAA 244

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+H+TPEDGFSYASFE+VGYD   + L  LVERVLACF+P +FSIA+HA+VA K++E+
Sbjct: 245 VSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLER 304

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYW 331
            C ++                       KF KT    SP+S LK  W
Sbjct: 305 VCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCASPKSVLKGCW 351

Datura stramonium (taxid: 4076)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q42679|DCAM_CATRO S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/356 (67%), Positives = 274/356 (76%), Gaps = 23/356 (6%)

Query: 7   TMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSND 66
            +  SAIGFEGYEKRLEISFFE S F DP+GKGLR L K+Q+DEIL PAECTIV SLSN 
Sbjct: 2   ALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNKSQIDEILEPAECTIVDSLSNQ 61

Query: 67  EVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFP 126
            +DSYVLSESSLFVY YKIIIKTCGTTKLLLSIP ILKLAE+LSL+VR+V+YTRGSFIFP
Sbjct: 62  YLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFP 121

Query: 127 GNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFT 186
           G Q +PHR+FSEEV +LD+YFGKL   SNA+I+G   +PQKWHVYSAS     SSDP +T
Sbjct: 122 GAQSFPHRSFSEEVELLDNYFGKLGLESNAFIMGNPDQPQKWHVYSASVGSEQSSDPTYT 181

Query: 187 IEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA 246
           +EMC+TGLDRE ASVFYK++S SA  MT  SGIRKILPDS+ICDFEFDPCGYSMNS+E A
Sbjct: 182 LEMCMTGLDREKASVFYKSESSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEA 241

Query: 247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIE 306
           AIST+HVTPEDGFSYASFE  GYD    NL  ++ERVLACFQP +FS+AVH +V  K +E
Sbjct: 242 AISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLE 301

Query: 307 QKCLL-----------------------NKFVKTEGNGSPRSTLKCYWKEEEEYEE 339
           Q C L                        KF++ +  GSPRS LKC WKE+E  EE
Sbjct: 302 QICSLELKEYSLDEKINEELGLGGSIIYKKFLRIDACGSPRSILKCCWKEDESEEE 357

Catharanthus roseus (taxid: 4058)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q04694|DCAM_SOLTU S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1

 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/347 (68%), Positives = 276/347 (79%), Gaps = 23/347 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LSND 
Sbjct: 5   LPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDY 64

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVYSYKIIIKTCGTTKLLL+IPPIL+LAETLSL V+ VRYTRGSFIFPG
Sbjct: 65  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 124

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHR+FSEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA  + S+DPV+T+
Sbjct: 125 AQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTL 184

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE ASVFYKT+  SA  MTV SGIRKILP S+ICDFEF+PCGYSMNS+EGAA
Sbjct: 185 EMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAA 244

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+H+TPEDGF+YASFE+VGY+P  + L  LVERVLACF+P +FS+A+HA+VA K++E+
Sbjct: 245 VSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLER 304

Query: 308 KC-----------------------LLNKFVKTEGNGSPRSTLKCYW 331
            C                       +  KF +T    SP+S LK  W
Sbjct: 305 ICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 351

Solanum tuberosum (taxid: 4113)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q38IY3|DCAM_SOLCI S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1

 Score =  484 bits (1246), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/347 (68%), Positives = 272/347 (78%), Gaps = 23/347 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           + VSAIGFEG+EKRLEISF EP +F DP GKGLR LTKAQLDEILGPAECTIV +LSND 
Sbjct: 3   LPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTKAQLDEILGPAECTIVDNLSNDY 62

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVYSYKIIIKTCGTTKLLL+IPPIL+LAETLSL V+ VRYTRGSFIFPG
Sbjct: 63  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPG 122

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHR+FSEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA  +  +DPV+T+
Sbjct: 123 AQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGTVQCNDPVYTL 182

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+ GLDRE ASVFYKT+  SA  MTV SGIRKILP  +ICDFEF+PCGYSMNS+EGAA
Sbjct: 183 EMCMAGLDREKASVFYKTEESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAA 242

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+H+TPEDGFSYASFE+VGYDP    L  LVERVLACF+P +FSIA+HA+VA K++E+
Sbjct: 243 VSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLER 302

Query: 308 KC-----------------------LLNKFVKTEGNGSPRSTLKCYW 331
            C                       +  KF +T    SP+S LK  W
Sbjct: 303 VCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPYCESPKSVLKGCW 349

Solanum chilense (taxid: 4083)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

>sp|Q9AXE3|DCAM_DAUCA S-adenosylmethionine decarboxylase proenzyme OS=Daucus carota GN=SAMDC PE=2 SV=1

 Score =  482 bits (1240), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/346 (68%), Positives = 275/346 (79%), Gaps = 24/346 (6%)

Query: 10  VSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVD 69
           VSAIGFEG+EKRLEISFFEPS F DPEGKGLR L+K QLDE LGPAECTIV+SLSN+ VD
Sbjct: 5   VSAIGFEGFEKRLEISFFEPSFFADPEGKGLRVLSKNQLDEFLGPAECTIVASLSNEHVD 64

Query: 70  SYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQ 129
           SYVLSESSLFVY+YKIIIKTCGTTKLL SIPPILKLA++LSL VRSVRYTRG FIFPG Q
Sbjct: 65  SYVLSESSLFVYAYKIIIKTCGTTKLLKSIPPILKLADSLSLTVRSVRYTRGCFIFPGAQ 124

Query: 130 LYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEM 189
            YPHR+FSEEV+VLD+YFGKL SGS AYI+GGS K QKWHVYSA A    + DPV+T+EM
Sbjct: 125 SYPHRSFSEEVSVLDNYFGKLGSGSKAYIMGGSDKQQKWHVYSACAASTRTLDPVYTMEM 184

Query: 190 CLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAIS 249
           C+T L+R+ ASVFYKT S SA ++T NSG+R ILP+S+ICDFEFDPCGYSMN+VEG A+S
Sbjct: 185 CMTSLNRDKASVFYKTNSSSATSVTDNSGLRDILPNSRICDFEFDPCGYSMNAVEGPAVS 244

Query: 250 TVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ-- 307
           T+H+TPEDGFSY+SFE VGYDP  VNL+ LV RVL CFQP +FSIA+ A++A +++E+  
Sbjct: 245 TIHITPEDGFSYSSFEAVGYDPKSVNLSDLVARVLNCFQPGEFSIALQADIASELLEKTS 304

Query: 308 ---------------------KCLLNKFVK-TEGNGSPRSTLKCYW 331
                                  +  KFVK TE   SPRS LKC W
Sbjct: 305 SVHVKGYRVEEKTCEELGMDGSIVYQKFVKTTERCESPRSVLKCCW 350

Daucus carota (taxid: 4039)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 5

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
233142402	364	S-adenosylmethionine decarboxylase [Citr	1.0	0.936	0.923	0.0
255546953	361	s-adenosylmethionine decarboxylase, puta	0.953	0.900	0.738	1e-147
86990289	358	S-adenosylmethionine decarboxylase proen	0.950	0.905	0.731	1e-144
147832563	357	hypothetical protein VITISV_041154 [Viti	0.944	0.901	0.733	1e-144
338760831	355	S-adenosylmethionine decarboxylase [Goss	0.950	0.912	0.733	1e-143
356495851	408	PREDICTED: S-adenosylmethionine decarbox	0.970	0.811	0.715	1e-143
359473648	410	PREDICTED: S-adenosylmethionine decarbox	0.953	0.792	0.724	1e-143
224108597	355	predicted protein [Populus trichocarpa]	0.967	0.929	0.725	1e-143
351720756	355	S-adenosylmethionine decarboxylase [Glyc	0.967	0.929	0.711	1e-142
296939591	358	S-adenosylmethionine decarboxylase [Arac	0.961	0.916	0.733	1e-142

>gi|233142402|gb|ACQ91107.1| S-adenosylmethionine decarboxylase [Citrus sinensis]

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/364 (92%), Positives = 339/364 (93%), Gaps = 23/364 (6%)

Query: 1   MVSADTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIV 60
           MVSADTTMAVSAIGFEGYEKRLEISFFEPS+FVDPEGKGLRRLTKAQLDEILGPAECTIV
Sbjct: 1   MVSADTTMAVSAIGFEGYEKRLEISFFEPSIFVDPEGKGLRRLTKAQLDEILGPAECTIV 60

Query: 61  SSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTR 120
           SSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTR
Sbjct: 61  SSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTR 120

Query: 121 GSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLIS 180
           GSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLIS
Sbjct: 121 GSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLIS 180

Query: 181 SDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSM 240
           SDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILP SKICDFEFDPCGYSM
Sbjct: 181 SDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPGSKICDFEFDPCGYSM 240

Query: 241 NSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEV 300
           NSVEGAAIST+HVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEV
Sbjct: 241 NSVEGAAISTIHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEV 300

Query: 301 AGKMIEQKCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEY 337
           AGKMIEQ+CLLN                       KFVKTEGNGSPRSTLKC WKEEEEY
Sbjct: 301 AGKMIEQECLLNVKGYSREERGLEELGMGGSIWYQKFVKTEGNGSPRSTLKCCWKEEEEY 360

Query: 338 EEDG 341
           EEDG
Sbjct: 361 EEDG 364

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546953|ref|XP_002514534.1| s-adenosylmethionine decarboxylase, putative [Ricinus communis] gi|223546138|gb|EEF47640.1| s-adenosylmethionine decarboxylase, putative [Ricinus communis]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/348 (73%), Positives = 286/348 (82%), Gaps = 23/348 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MAVSAIGFEGYEKRLEISFFE  MFVDPEGKGLR L+KAQLD ILGPAECTIV SLSN+ 
Sbjct: 6   MAVSAIGFEGYEKRLEISFFELGMFVDPEGKGLRSLSKAQLDMILGPAECTIVDSLSNEN 65

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY YKIIIKTCGTTKLLL+IPPILKLA+ LSLNV+SVRYTRGSFIFPG
Sbjct: 66  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLAIPPILKLADALSLNVKSVRYTRGSFIFPG 125

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q YPHR+FSEEVAVLD YFGKL +GS AY++GG   PQKWHVYSASA      D V+TI
Sbjct: 126 AQSYPHRSFSEEVAVLDDYFGKLGAGSTAYVMGGLHSPQKWHVYSASAHSTYCCDCVYTI 185

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGL+RE ASVF+K+QS SA  MTV+SGIR+ILP+SKICDF+FDPCGYSMN++EGAA
Sbjct: 186 EMCMTGLEREKASVFFKSQSASAAVMTVDSGIRRILPNSKICDFDFDPCGYSMNAIEGAA 245

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           IST+H+TPEDGFSYASFETVGY+P +VNLNQLVERVLACFQP  FSIAVHA VA K + Q
Sbjct: 246 ISTIHITPEDGFSYASFETVGYNPEEVNLNQLVERVLACFQPSQFSIAVHANVADKQLVQ 305

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYWK 332
            C L+                       KFV+T  +GSPRSTLKC W+
Sbjct: 306 TCALDVKGYCRGERSFEELGMGGSIVYQKFVRTGDSGSPRSTLKCCWR 353

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|86990289|emb|CAD98785.2| S-adenosylmethionine decarboxylase proenzyme [Vitis vinifera]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/347 (73%), Positives = 287/347 (82%), Gaps = 23/347 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           + VSAIGFEGYEKRLEISF EP +F DPEG+GLR L++AQLDEIL PAECTIV SLSND 
Sbjct: 3   LPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQLDEILEPAECTIVGSLSNDI 62

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY YKIIIKTCGTTKLLLSIPPILKLA+TLSL+V  VRYTRGSF FPG
Sbjct: 63  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLADTLSLSVSCVRYTRGSFNFPG 122

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q YPHR+FSEEVAVLDSYFGKL SGS AY++G S K QKWHVYSASAE   + DPV+T+
Sbjct: 123 AQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQKWHVYSASAEVRSACDPVYTL 182

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDREMASVFYKT S SA  MT  SGIRKILPDS+ICDFEFDPCGYSMN++EGAA
Sbjct: 183 EMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSEICDFEFDPCGYSMNAIEGAA 242

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           IST+HVTPEDGFSYASFETVGY+P DVNL+ L+ERVL+CFQP +FS+AVHA+++GK++E+
Sbjct: 243 ISTIHVTPEDGFSYASFETVGYNPKDVNLSHLIERVLSCFQPNEFSVAVHADISGKLLER 302

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYW 331
            CLL+                       +F+KTEG  SPRS LKC W
Sbjct: 303 NCLLDVKGYCCEERSNEELGMCGSMVYHRFMKTEGLVSPRSILKCCW 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147832563|emb|CAN66014.1| hypothetical protein VITISV_041154 [Vitis vinifera]

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 253/345 (73%), Positives = 287/345 (83%), Gaps = 23/345 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           + VSAIGFEGYEKRLEISF EP +F DPEG+GLR L++AQLDEIL PAECTIV SLSND 
Sbjct: 3   LPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQLDEILEPAECTIVGSLSNDI 62

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY YKIIIKTCGTTKLLLSIPPILKLA+TLSL+V  VRYTRGSF FPG
Sbjct: 63  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLADTLSLSVSCVRYTRGSFNFPG 122

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q YPHR+FSEEVAVLDSYFGKL SGS AY++G S K QKWHVYSASAE   + DPV+T+
Sbjct: 123 AQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQKWHVYSASAEVRSACDPVYTL 182

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDREMASVFYKT S SA  MT  SGIRKILPDS+ICDFEFDPCGYSMN++EGAA
Sbjct: 183 EMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSEICDFEFDPCGYSMNAIEGAA 242

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           IST+HVTPEDGFSYASFET+GY+P DVNL+QL+ERVL+CFQP +FS+AVHA+++GK++E+
Sbjct: 243 ISTIHVTPEDGFSYASFETMGYNPKDVNLSQLIERVLSCFQPNEFSVAVHADISGKLLER 302

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKC 329
            CLL+                       +F+KTEG  SPRS LKC
Sbjct: 303 NCLLDVKGYCCEERSNEELGMCGSIVYHRFMKTEGVVSPRSILKC 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|338760831|gb|AEI98604.1| S-adenosylmethionine decarboxylase [Gossypium hirsutum]

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/349 (73%), Positives = 285/349 (81%), Gaps = 25/349 (7%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MAVSAIGFEGYEKRLEISFFEP +F DPEGKGLR LTKAQLDEILGPAECTIVSSLSN +
Sbjct: 1   MAVSAIGFEGYEKRLEISFFEPGIFADPEGKGLRALTKAQLDEILGPAECTIVSSLSNKQ 60

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY YKIIIKTCGTTKLLL+IPPILKLA +LSL V+SVRYTRGSFIFPG
Sbjct: 61  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLAIPPILKLAGSLSLAVKSVRYTRGSFIFPG 120

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q +PHRNFSEEVAVLD+YFGKL +G  A ++GG  K QKWHVYSASAEP+ ++ PV+T+
Sbjct: 121 AQPFPHRNFSEEVAVLDNYFGKLGAGGKACVMGGLDK-QKWHVYSASAEPVTATGPVYTL 179

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMCLTGLDR+ ASVFYK QSGSA  MT+NSGIRKILP+S+ICDFEF PCGYSMN++EGAA
Sbjct: 180 EMCLTGLDRDKASVFYKDQSGSAAVMTINSGIRKILPESEICDFEFGPCGYSMNAIEGAA 239

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAG-KMIE 306
           IST+HVTPEDGFSYASFE VGY+  D NL QLV RVL CF+P DFS+AVH +V G + +E
Sbjct: 240 ISTIHVTPEDGFSYASFEAVGYNLKDKNLKQLVGRVLKCFKPGDFSVAVHVDVGGDQSLE 299

Query: 307 QKCLLN-----------------------KFVKTEGNGSPRSTLKCYWK 332
           Q CLL+                       KF  T G GSPRSTLKC WK
Sbjct: 300 QSCLLDVKGYRCGEMGIEGLGNGGSMMYQKFSSTGGCGSPRSTLKCCWK 348

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356495851|ref|XP_003516785.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like [Glycine max]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/355 (71%), Positives = 283/355 (79%), Gaps = 24/355 (6%)

Query: 7   TMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSND 66
            MAVSAIGFEG+EKRLEISFF+P +F DPEG GLR L K+QLDEIL PA CTIVSSL ND
Sbjct: 55  AMAVSAIGFEGFEKRLEISFFQPGLFADPEGMGLRALAKSQLDEILTPAACTIVSSLRND 114

Query: 67  EVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFP 126
            VDSYVLSESSLFVY+YKIIIKTCGTTKLLL+IPPILK AE LSLNVRSV YTRGSFIFP
Sbjct: 115 HVDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKFAEMLSLNVRSVNYTRGSFIFP 174

Query: 127 GNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFT 186
           G Q YPHRNFSEEVA+LD YFGKL +GSNAYI+GG  K Q WHVYSASA+ +   D V+T
Sbjct: 175 GAQPYPHRNFSEEVAILDGYFGKLSAGSNAYILGGQDKSQNWHVYSASADSVTPCDNVYT 234

Query: 187 IEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA 246
           +EMC+TGLDRE A VFYK QS SA  MTVNSGIRKILPDS+ICDF+F+PCGYSMNSVEGA
Sbjct: 235 LEMCMTGLDREKAQVFYKEQSASAAIMTVNSGIRKILPDSEICDFDFEPCGYSMNSVEGA 294

Query: 247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIE 306
           A+ST+HVTPEDGFSYASFETVGYD   VNLN++V+RVLACF P +FS+AVH + A K+ +
Sbjct: 295 AVSTIHVTPEDGFSYASFETVGYDFKVVNLNEMVKRVLACFLPTEFSVAVHVDGASKLFD 354

Query: 307 QKCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYE 338
           Q C L+                       KF KT   GSPRSTLKC WKEE+E E
Sbjct: 355 QTCFLDVKGYCREERSHEGLGMGGSLVYQKFAKTCDCGSPRSTLKC-WKEEDEEE 408

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473648|ref|XP_003631339.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme [Vitis vinifera]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 252/348 (72%), Positives = 286/348 (82%), Gaps = 23/348 (6%)

Query: 7   TMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSND 66
            + VSAIGFEGYEKRLEISF EP +F DPEG+GLR L++AQLDEIL PAEC IV SLSND
Sbjct: 52  ALPVSAIGFEGYEKRLEISFSEPGIFSDPEGRGLRSLSRAQLDEILEPAECIIVGSLSND 111

Query: 67  EVDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFP 126
            VDSYVLSESSLFVY YKIIIKTCGTTKLLLSIPPILKLA+ LSL+V  VRYTRGSF FP
Sbjct: 112 IVDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILKLADALSLSVSCVRYTRGSFNFP 171

Query: 127 GNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFT 186
           G Q YPHR+FSEEVAVLDSYFGKL SGS AY++G S K QKWHVYSASAE   + DPV+T
Sbjct: 172 GAQPYPHRHFSEEVAVLDSYFGKLGSGSKAYVMGSSDKSQKWHVYSASAEVRSACDPVYT 231

Query: 187 IEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA 246
           +EMC+TGLDREMASVFYKT S SA  MT  SGIRKILPDS+ICDFEFDPCGYSMN++EGA
Sbjct: 232 LEMCMTGLDREMASVFYKTHSSSAVKMTDTSGIRKILPDSEICDFEFDPCGYSMNAIEGA 291

Query: 247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIE 306
           AIST+HVTPEDGFSYASFET+GY+P DVNL+QL+ERVL+CFQP +FS+AVHA+++GK++E
Sbjct: 292 AISTIHVTPEDGFSYASFETMGYNPKDVNLSQLIERVLSCFQPNEFSVAVHADISGKLLE 351

Query: 307 QKCLLN-----------------------KFVKTEGNGSPRSTLKCYW 331
           + CLL+                       +F+KTEG  SPRS LKC W
Sbjct: 352 RNCLLDVKGYCCEERSNEELGMCGSIVYHRFMKTEGLVSPRSILKCCW 399

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108597|ref|XP_002314904.1| predicted protein [Populus trichocarpa] gi|222863944|gb|EEF01075.1| predicted protein [Populus trichocarpa]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 256/353 (72%), Positives = 284/353 (80%), Gaps = 23/353 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           +AVSAIGFEGYEKRLEI++FEP +F DPEGKGLR L+K QLDEILGPAECTIV SLSND 
Sbjct: 3   LAVSAIGFEGYEKRLEITYFEPGIFDDPEGKGLRSLSKPQLDEILGPAECTIVDSLSNDY 62

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY YKIIIKTCGTTKLLLSIP ILKLA+TLSLNVRSVRYTRGSFIFPG
Sbjct: 63  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLADTLSLNVRSVRYTRGSFIFPG 122

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q YPHR+FSEE+AVLD  FGKL   S AYI+G   KPQKWHVYSASA+   S D ++TI
Sbjct: 123 AQSYPHRSFSEEIAVLDGCFGKLGLASKAYIMGCLDKPQKWHVYSASADSARSRDLIYTI 182

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE ASVFYKTQS SA AMT +SGIRKILP S ICDFEF+PCGYSMNS+EGAA
Sbjct: 183 EMCMTGLDREKASVFYKTQSSSAAAMTDDSGIRKILPASNICDFEFEPCGYSMNSIEGAA 242

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           IST+HVTPEDGFSYASFE  GYD  D +LNQLV+RVLACFQ  +FSIAVHA+VAG+ +E+
Sbjct: 243 ISTIHVTPEDGFSYASFEAAGYDLKDASLNQLVDRVLACFQATEFSIAVHADVAGEQLER 302

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEY 337
            C L+                       KFV++    SPRS LKC WKEEE+Y
Sbjct: 303 ICSLDVKGYCRGERIHGELGMGGSIIYQKFVRSGNADSPRSILKCCWKEEEDY 355

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720756|ref|NP_001236931.1| S-adenosylmethionine decarboxylase [Glycine max] gi|19526455|gb|AAL89723.1|AF488307_1 S-adenosylmethionine decarboxylase [Glycine max]

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/354 (71%), Positives = 281/354 (79%), Gaps = 24/354 (6%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           MAVSAIGFEG+EKRLEISFF+P +F DPEG+GLR LTK+QL EIL PA CTIVSSL ND 
Sbjct: 3   MAVSAIGFEGFEKRLEISFFQPGLFADPEGRGLRALTKSQLGEILTPAACTIVSSLKNDN 62

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
           VDSYVLSESSLFVY+YKIIIKTCGTTKLLL+IPPILK AE LSLNV+SV YTRGSFIFP 
Sbjct: 63  VDSYVLSESSLFVYAYKIIIKTCGTTKLLLAIPPILKFAEMLSLNVKSVNYTRGSFIFPS 122

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
            Q YPHRNFSEEVA+LD YFGKL +GSNAYI+GG  K Q WHVYSASA+ +   D V+T+
Sbjct: 123 AQPYPHRNFSEEVAILDGYFGKLGAGSNAYILGGQDKAQNWHVYSASADSVTQCDNVYTL 182

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
           EMC+TGLDRE A VFYK QS SA  MTVNSGIRKILPDS+ICDF+F+PCGYSMNSVEGAA
Sbjct: 183 EMCMTGLDREKAQVFYKEQSASAAMMTVNSGIRKILPDSEICDFDFEPCGYSMNSVEGAA 242

Query: 248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQ 307
           +ST+HVTPEDGFSYASFETVGYD   VNLN++V+RVLACF P +FS+AVH + A K  EQ
Sbjct: 243 VSTIHVTPEDGFSYASFETVGYDFKAVNLNEMVQRVLACFLPTEFSVAVHVDGASKSFEQ 302

Query: 308 KCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYE 338
            C L+                       KF KT   GSPRSTLKC W EE+E E
Sbjct: 303 TCFLDVKGYCREERSHEGLGMGGSVVYQKFGKTSDCGSPRSTLKC-WNEEDEEE 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296939591|gb|ADH95190.1| S-adenosylmethionine decarboxylase [Arachis hypogaea]

 Score =  510 bits (1313), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 259/353 (73%), Positives = 284/353 (80%), Gaps = 25/353 (7%)

Query: 10  VSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVD 69
           VSAIGFEGYEKRLEI F  P +F DPEGKGLR LTK+QLDEIL PAECTIVSSLS+++VD
Sbjct: 7   VSAIGFEGYEKRLEICFSHPGLFSDPEGKGLRSLTKSQLDEILAPAECTIVSSLSSNDVD 66

Query: 70  SYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQ 129
           SYVLSESSLFVY YKIIIKTCGTTKLLLSIPPIL+LAETLSLNV+SVRYTRGSFIFPG Q
Sbjct: 67  SYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILRLAETLSLNVKSVRYTRGSFIFPGAQ 126

Query: 130 LYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGS-GKPQKWHVYSASAEPLISSDPVFTIE 188
            +PHR+FSEEVA+LDS+FGKL SGS AYI+GG   KPQKWHVYSASAE +   D V+T+E
Sbjct: 127 SFPHRSFSEEVAILDSHFGKLGSGSMAYIMGGGIDKPQKWHVYSASAESVSPCDSVYTLE 186

Query: 189 MCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAI 248
           MC+TGLDRE A VFYK  SGSA  MT NSGIRKILPDS ICDFEF+PCGYSMNSVEGAA+
Sbjct: 187 MCMTGLDREKALVFYKEPSGSAARMTANSGIRKILPDSDICDFEFEPCGYSMNSVEGAAV 246

Query: 249 STVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQK 308
           ST+HVTPEDGFSYASFETVGYD   VNLN LVE VLACFQP +FS+AVH + + K  EQ 
Sbjct: 247 STIHVTPEDGFSYASFETVGYDLKVVNLNDLVESVLACFQPTEFSMAVHVDCSSKSFEQS 306

Query: 309 CLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYE 338
           CLL+                       KFVKT   GSPRSTLKC WK+E E E
Sbjct: 307 CLLDVKGYCREERSHEGIGMGGSVVYQKFVKTSDCGSPRSTLKC-WKDEVEEE 358

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	341
TAIR|locus:2094473	349	AT3G25570 [Arabidopsis thalian	0.888	0.868	0.660	2.5e-106
TAIR|locus:2146132	362	AT5G15950 [Arabidopsis thalian	0.868	0.817	0.652	5.3e-104
TAIR|locus:2076834	366	SAMDC "S-adenosylmethionine de	0.859	0.800	0.653	1.4e-101
TAIR|locus:2144985	347	BUD2 "BUSHY AND DWARF 2" [Arab	0.832	0.818	0.458	6.4e-60
DICTYBASE|DDB_G0275567	379	amd1 "S-adenosylmethionine dec	0.809	0.728	0.387	9.1e-45
FB|FBgn0019932	347	SamDC "S-adenosylmethionine de	0.882	0.867	0.369	1.2e-42
WB|WBGene00004875	368	smd-1 [Caenorhabditis elegans	0.829	0.769	0.365	2.1e-38
MGI|MGI:88004	334	Amd1 "S-adenosylmethionine dec	0.821	0.838	0.340	1.1e-37
UNIPROTKB|P17707	334	AMD1 "S-adenosylmethionine dec	0.821	0.838	0.340	1.5e-37
UNIPROTKB|Q5F484	341	AMD1 "S-adenosylmethionine dec	0.824	0.824	0.345	1.9e-37

TAIR|locus:2094473 AT3G25570 [Arabidopsis thaliana (taxid:3702)]

 Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
 Identities = 202/306 (66%), Positives = 241/306 (78%)

Query:     8 MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
             MAVSA GFEG+EKRLEISFFE + F+DP+GK LR LTK+QLDEIL PAECTIVSSL+N  
Sbjct:     1 MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSF 60

Query:    68 VDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPG 127
             VDSYVLSESSLFVY YKIIIKTCG              A++L L V+SVRYTRGSFIFPG
Sbjct:    61 VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGS-GKPQKWHVYSASA--EPLISSDPV 184
              Q YPHR+FSEEVA+LD YFGKL +GS A+++GGS   PQ+WHVYSAS+  E  +   PV
Sbjct:   121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSDNNPQRWHVYSASSTEESAVCDKPV 180

Query:   185 FTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVE 244
             +T+EMC+TGLD   ASVF+KT S SA  MT++SGIR ILP S+ICDF F+PCGYSMNS+E
Sbjct:   181 YTLEMCMTGLDNIKASVFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSIE 240

Query:   245 GAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKM 304
             G A+ST+HVTPEDGFSYASFETVGYD   +N  +LV+RVL CF P +FS+AVHA +  ++
Sbjct:   241 GDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLGTEV 300

Query:   305 IEQKCL 310
             +   C+
Sbjct:   301 LASDCV 306

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=IEA

TAIR|locus:2146132 AT5G15950 [Arabidopsis thaliana (taxid:3702)]

 Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
 Identities = 193/296 (65%), Positives = 239/296 (80%)

Query:     8 MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
             MA+SAIGFEGYEKRLE++FFEP +F+D +GKGLR L K+Q+DEIL PAECTIVSSLSND+
Sbjct:     1 MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query:    68 VDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPG 127
             +DSYVLSESSLF++ YKI+IKTCG              A  LSL+V++VRYTRGSF+ PG
Sbjct:    61 LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTI 187
              Q +PHRNFSEEV+VLD +F KL   S AY++G   + +KWHVYSAS+    + + V+T+
Sbjct:   121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANSNNKNNVYTL 180

Query:   188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAA 247
             EMC+TGLD++ ASVFYK +S SAG+MT NSGIRKILP S+ICDFEF+PCGYSMNS+EG A
Sbjct:   181 EMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDA 240

Query:   248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
             IST+HVTPEDGFSYASFE VGYD   ++L+ LV +VL CF+P+ FS+AVH+ VA K
Sbjct:   241 ISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQK 296

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=IEA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009813 "flavonoid biosynthetic process" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2076834 SAMDC "S-adenosylmethionine decarboxylase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
 Identities = 192/294 (65%), Positives = 238/294 (80%)

Query:     8 MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
             MA+SAIGFEGYEKRLE++FFEPS+F D +G GLR LTK+QLDEIL PA CTIVSSLSND+
Sbjct:     1 MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query:    68 VDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPG 127
             +DSYVLSESS FVY YK+IIKTCG              A  LSL+V+SV+YTRGSF+ PG
Sbjct:    61 LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLIS-SDPVFT 186
              Q +PHR+FSEEV+VLD +F +L   S AY++G   + +KWHVY+ASA+   + ++ V+T
Sbjct:   121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYT 180

Query:   187 IEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA 246
             +EMC+TGLDRE A+VFYK ++   G+MT NSGIRKILP S+ICDFEF+PCGYSMNS+EG 
Sbjct:   181 LEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGD 240

Query:   247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEV 300
             AIST+HVTPEDGFSYASFE VGYD N ++L+QLV RVL+CF+P+ FS+AVH+ V
Sbjct:   241 AISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSV 294

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS;IDA

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=IEA

GO:0006596 "polyamine biosynthetic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0016458 "gene silencing" evidence=IMP

GO:0019079 "viral genome replication" evidence=IMP

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

GO:0016197 "endosomal transport" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

TAIR|locus:2144985 BUD2 "BUSHY AND DWARF 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 137/299 (45%), Positives = 185/299 (61%)

Query:     8 MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
             MAVS  GFEG+EKRLE+ FF+    +     GLR +    LD++L   +CT+VS+++N  
Sbjct:     1 MAVS--GFEGFEKRLELRFFDDDKPITKNPMGLRLIDFESLDQVLNEVQCTVVSAVANRS 58

Query:    68 VDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPG 127
              D+YVLSESSLFVY  KIIIKTCG              A  L L +R+ RY+RGSFIFP 
Sbjct:    59 FDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLARNLGLTLRACRYSRGSFIFPK 118

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQK-WHVYSASAEPLISSDPVFT 186
              Q +P+ +F +EV V++    K +    A ++  S  P + WHV++ASA+ + S + V  
Sbjct:   119 AQPFPYTSFKDEVIVVEESLPKSLCYRKASVMTPSNNPSRAWHVFTASAD-VESDEHVVV 177

Query:   187 IEMCLTGLDREMASVFYKTQ------SGSAGA-MTVNSGIRKILPDSKICDFEFDPCGYS 239
             +E+C+T LDR  A  F+K +      S SAG  MT  SGI  I  ++ ICDF FDPCGYS
Sbjct:   178 VEVCMTELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGYS 237

Query:   240 MNSVEGAAISTVHVTPEDGFSYASFETVG---YDPNDVNLNQLVERVLACFQPRDFSIA 295
             MN V+G   ST+HVTPEDGFSYASFE  G   YD    ++++++ R +  F+P D SIA
Sbjct:   238 MNGVDGDRYSTIHVTPEDGFSYASFEC-GLSLYDNGHEDISEVLSRAIDVFRPSDVSIA 295

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=IEA

DICTYBASE|DDB_G0275567 amd1 "S-adenosylmethionine decarboxylase" [Dictyostelium discoideum (taxid:44689)]

 Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
 Identities = 114/294 (38%), Positives = 159/294 (54%)

Query:    14 GFEGYEKRLEISFFE------PSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
             GFEG EK+L+I F         S+   P   GLR + K +   +L  A CTI+S  SND 
Sbjct:    28 GFEGPEKKLDIRFGPISKGSVKSIAGSPSKVGLRTIDKEKWQTVLDSARCTIISQTSNDH 87

Query:    68 VDSYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPG 127
             +DSYVLSESSLFVY  + +IKTCG               +   L V  V ++R +   P 
Sbjct:    88 MDSYVLSESSLFVYPRRAMIKTCGTTTLLHLIAKMVQVGKECGLEVEMVVFSRKNLNQPS 147

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS--AEPLISSDPVF 185
              Q++PH +FS+EV    ++  K+  G  AY++G   K   W++Y A     P +      
Sbjct:   148 KQVFPHCSFSDEV----NFLNKIFDGQ-AYVMGDVNKDH-WNLYIADFRKNPTLQRTEQ- 200

Query:   186 TIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG 245
             T E+ +  LD  +   F+K +  SA   TVNSGI  +LP S I DF+FDPCGYSMN +  
Sbjct:   201 TFEVMMHDLDETVMKQFFKREGVSAWDTTVNSGIADLLPGSMIDDFQFDPCGYSMNGLLN 260

Query:   246 AAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAE 299
                 T+H+TPE   SY SF+T   +    + NQL+ +VL  F+P  F+ A++AE
Sbjct:   261 EFYWTIHITPESHCSYVSFDT---NVALADYNQLLAKVLNVFKPGRFTAALYAE 311

GO:0008295 "spermidine biosynthetic process" evidence=IEA

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0016829 "lyase activity" evidence=IEA

GO:0006596 "polyamine biosynthetic process" evidence=IEA

GO:0006557 "S-adenosylmethioninamine biosynthetic process" evidence=IEA

FB|FBgn0019932 SamDC "S-adenosylmethionine decarboxylase" [Drosophila melanogaster (taxid:7227)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 122/330 (36%), Positives = 173/330 (52%)

Query:    15 FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
             FEG EK LEI +FE S   D +   LR ++++  + +L    C I+S+  ND +D++VLS
Sbjct:     9 FEGVEKLLEI-WFEESSNGDDD---LRNISRSDWENVLSNVNCQIISTSKNDIIDAFVLS 64

Query:    75 ESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNV-RSVRYTRGSFIFPGNQLYPH 133
             ESS+FV   + I+KTCG              AE    NV   + Y+R +F  P  Q+ PH
Sbjct:    65 ESSMFVSKRRWILKTCGTTTPLKCLGQLLKLAEANGYNVVADLFYSRKNFTRPEAQITPH 124

Query:   134 RNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAE-----P-LIS------S 181
             + F+EEV  LDS F        +Y +G S   + W++Y+ S       P LIS      S
Sbjct:   125 QGFTEEVTYLDSIF----PNGRSYCLG-SMNLECWYLYTFSRSDIKITPQLISDEKNVDS 179

Query:   182 DPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMN 241
             DP  TIE+ +  LD E  S+FYK +   A   TV SGI  ILP   I DF FDPCGYSMN
Sbjct:   180 DPDQTIEILMQDLDPETMSIFYKNKFNDANGATVKSGIDTILPTMHIDDFLFDPCGYSMN 239

Query:   242 SV-EGAAISTVHVTPEDGFSYASFET-VGYDPNDVNLNQLVERVLACFQPRDFSIAVHAE 299
              + +     T+H+TPE+ FSY SFET V       N  +L+ +V+  F+P  F + + A 
Sbjct:   240 GINDKGEYMTIHITPENQFSYVSFETNVALS----NYRKLINQVINTFKPGKFIVTIFAN 295

Query:   300 VAGKMIEQKCLLNKFVKTEGNGSPRSTLKC 329
                   E    L +   ++G+   R+ ++C
Sbjct:   296 KCSLAYETMKEL-EVEYSQGSHWKRTDMQC 324

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;ISS;NAS

GO:0006597 "spermine biosynthetic process" evidence=IEA;NAS

GO:0008295 "spermidine biosynthetic process" evidence=IEA;NAS

WB|WBGene00004875 smd-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 111/304 (36%), Positives = 167/304 (54%)

Query:    15 FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
             FEG EK LE+ F   +     E + LR + + ++D +L  A C I+ S  N+ +DSYVLS
Sbjct:    25 FEGAEKLLELWFCSSTQ---NETRSLRIIPREEIDAMLDIARCKILHSKHNESIDSYVLS 81

Query:    75 ESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS-LN-VRSVRYTRGSFIFPGNQLYP 132
             ESSLF+   ++I+KTCG              A   + L+ V+SV Y+R +F+ P  Q   
Sbjct:    82 ESSLFISDNRVILKTCGTTRLLAALPVIMQLAGAYAGLDQVQSVYYSRKNFLRPDLQPSL 141

Query:   133 HRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISS--DPVFTIEMC 190
             H+NF  EV  LDS+F   V G +AY +G S K  +W++Y+   E    +   P  T+E+ 
Sbjct:   142 HKNFDAEVEYLDSFF---VDG-HAYCLG-SLKQDRWYLYTFHREVEFPAHKQPDHTLEIL 196

Query:   191 LTGLDREMASVFYKTQSGSAGAMTVNSGIRKILP-DSKICDFEFDPCGYSMNSV--EGAA 247
             ++ LD E+   F K  +       + +GI KI+P  + + D  FDPCGYSMN+   +   
Sbjct:   197 MSDLDEEVLHKFTKDYAVDGNDCFMRAGIDKIIPAGADVHDELFDPCGYSMNAYMNDTDQ 256

Query:   248 ISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHA-EVA--GKM 304
              +T+HVTPE  FS+ASFET   + + V L     +VL CF+P    + V A +++  GK 
Sbjct:   257 YATIHVTPEKAFSFASFET---NQDLVCLYSQTRKVLQCFRPNKILMTVFANDISEKGKD 313

Query:   305 IEQK 308
              +Q+
Sbjct:   314 AQQQ 317

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA;IDA

GO:0008295 "spermidine biosynthetic process" evidence=IEA;IDA

GO:0006597 "spermine biosynthetic process" evidence=IEA;IDA

GO:0007413 "axonal fasciculation" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0016358 "dendrite development" evidence=IMP

MGI|MGI:88004 Amd1 "S-adenosylmethionine decarboxylase 1" [Mus musculus (taxid:10090)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 100/294 (34%), Positives = 158/294 (53%)

Query:    15 FEGYEKRLEISFFEPSMFVDPEGKG-LRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVL 73
             FEG EK LE+ +F        +G G LR + +++ D +L   +C+I+S    D+ ++YVL
Sbjct:     7 FEGTEKLLEV-WFSRQQSDASQGSGDLRTIPRSEWDVLLKDVQCSIISVTKTDKQEAYVL 65

Query:    74 SESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSL--NVRSVRYTRGSFIFPGNQLY 131
             SESS+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q Y
Sbjct:    66 SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGY 125

Query:   132 PHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMC 190
             PHRNF EE+  L++ F    +G+ AY +G       W++Y+    E  + S P  T+E+ 
Sbjct:   126 PHRNFQEEIEFLNAIFP---NGA-AYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEIL 180

Query:   191 LTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAIS 249
             ++ LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      
Sbjct:   181 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATLFNPCGYSMNGMKSDGTYW 240

Query:   250 TVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
             T+H+TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct:   241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 291

GO:0001701 "in utero embryonic development" evidence=IMP

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006595 "polyamine metabolic process" evidence=ISO

GO:0006596 "polyamine biosynthetic process" evidence=IEA

GO:0006597 "spermine biosynthetic process" evidence=ISO;IDA

GO:0008295 "spermidine biosynthetic process" evidence=ISO;IDA

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

UNIPROTKB|P17707 AMD1 "S-adenosylmethionine decarboxylase proenzyme" [Homo sapiens (taxid:9606)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 100/294 (34%), Positives = 158/294 (53%)

Query:    15 FEGYEKRLEISFFEPSMFVDPEGKG-LRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVL 73
             FEG EK LE+ F       + +G G LR + +++ D +L   +C+I+S    D+ ++YVL
Sbjct:     7 FEGTEKLLEVWFSRQQPDAN-QGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVL 65

Query:    74 SESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSL--NVRSVRYTRGSFIFPGNQLY 131
             SESS+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q Y
Sbjct:    66 SESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGY 125

Query:   132 PHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMC 190
             PHRNF EE+  L++ F    +G+ AY +G       W++Y+    E  + S P  T+E+ 
Sbjct:   126 PHRNFQEEIEFLNAIFP---NGA-AYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEIL 180

Query:   191 LTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAIS 249
             ++ LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      
Sbjct:   181 MSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYW 240

Query:   250 TVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
             T+H+TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct:   241 TIHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 291

GO:0006557 "S-adenosylmethioninamine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=NAS

GO:0006597 "spermine biosynthetic process" evidence=NAS

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

GO:0006595 "polyamine metabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q5F484 AMD1 "S-adenosylmethionine decarboxylase proenzyme" [Gallus gallus (taxid:9031)]

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 103/298 (34%), Positives = 158/298 (53%)

Query:    15 FEGYEKRLEISFF--EPSMFVDPEGKG---LRRLTKAQLDEILGPAECTIVSSLSNDEVD 69
             FEG EK LE+ F   +P+     + KG   LR + + + D++L    C I+S    D+ +
Sbjct:     9 FEGTEKLLEVWFARQQPAPQEPHQSKGSGDLRTIPRIEWDKLLENVHCLIISVTKTDKQE 68

Query:    70 SYVLSESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSL--NVRSVRYTRGSFIFPG 127
             +YVLSESS+FV   + I+KTCG              A   S   +++S  Y+R +F+ P 
Sbjct:    69 AYVLSESSMFVSKRRFILKTCGTTLLLQALVPLLELAREYSGFDSIQSFFYSRKNFMKPS 128

Query:   128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFT 186
             +Q YPHRNF EEV  L+  F    +G+ AY +G       W++Y+    E  IS+ P  T
Sbjct:   129 HQEYPHRNFQEEVEFLNEIFP---NGA-AYCMGRMNS-DCWYLYTLDFPESRISNQPDQT 183

Query:   187 IEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG- 245
             +E+ ++ LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++  
Sbjct:   184 LEILMSELDPVVMDQFYMKDGVTANDVTRMSGIRDLIPGSVIDATMFNPCGYSMNGMKSD 243

Query:   246 AAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
                 T+H+TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct:   244 GTYWTIHITPEPEFSYVSFET---NISQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 298

GO:0006597 "spermine biosynthetic process" evidence=IEA

GO:0008295 "spermidine biosynthetic process" evidence=IEA

GO:0004014 "adenosylmethionine decarboxylase activity" evidence=IEA

GO:0006557 "S-adenosylmethioninamine biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42679	DCAM_CATRO	4, ., 1, ., 1, ., 5, 0	0.6741	0.9765	0.9327	N/A	no
P31154	DCAM1_MOUSE	4, ., 1, ., 1, ., 5, 0	0.3569	0.8357	0.8532	yes	no
O65354	DCAM_HELAN	4, ., 1, ., 1, ., 5, 0	0.6149	0.9589	0.9058	N/A	no
P82184	DCAM2_MOUSE	4, ., 1, ., 1, ., 5, 0	0.3569	0.8357	0.8532	yes	no
Q96471	DCAM_IPONI	4, ., 1, ., 1, ., 5, 0	0.6497	0.9706	0.9143	N/A	no
Q39676	DCAM1_DIACA	4, ., 1, ., 1, ., 5, 0	0.7402	0.9002	0.8057	N/A	no
Q39677	DCAM2_DIACA	4, ., 1, ., 1, ., 5, 0	0.6685	0.9589	0.8673	N/A	no
Q9M4D8	DCAM_VICFA	4, ., 1, ., 1, ., 5, 0	0.6949	0.9677	0.9348	N/A	no
Q38IY3	DCAM_SOLCI	4, ., 1, ., 1, ., 5, 0	0.6858	0.9501	0.9050	N/A	no
Q42613	DCAM1_BRAJU	4, ., 1, ., 1, ., 5, 0	0.6688	0.8885	0.8233	N/A	no
O80402	DCAM_NICSY	4, ., 1, ., 1, ., 5, 0	0.7	0.9589	0.9058	N/A	no
Q96555	DCAM_DATST	4, ., 1, ., 1, ., 5, 0	0.6945	0.9501	0.8950	N/A	no
P17707	DCAM_HUMAN	4, ., 1, ., 1, ., 5, 0	0.3569	0.8357	0.8532	yes	no
O24575	DCAM_MAIZE	4, ., 1, ., 1, ., 5, 0	0.5229	0.9648	0.8225	N/A	no
Q9AXE3	DCAM_DAUCA	4, ., 1, ., 1, ., 5, 0	0.6878	0.9442	0.8919	N/A	no
P17708	DCAM_RAT	4, ., 1, ., 1, ., 5, 0	0.3535	0.8357	0.8558	yes	no
Q43820	DCAM_PEA	4, ., 1, ., 1, ., 5, 0	0.6864	0.9677	0.9348	N/A	no
P50243	DCAM_BOVIN	4, ., 1, ., 1, ., 5, 0	0.3535	0.8357	0.8532	yes	no
Q42829	DCAM_HORCH	4, ., 1, ., 1, ., 5, 0	0.5064	0.9648	0.8371	N/A	no
Q9M6K1	DCAM_IPOBA	4, ., 1, ., 1, ., 5, 0	0.6563	0.9736	0.9171	N/A	no
P91931	DCAM_DROME	4, ., 1, ., 1, ., 5, 0	0.3768	0.8856	0.8703	yes	no
A2XV58	DCAM_ORYSI	4, ., 1, ., 1, ., 5, 0	0.5437	0.9677	0.8291	N/A	no
Q9SDM8	DCAM3_BRAJU	4, ., 1, ., 1, ., 5, 0	0.6288	0.9442	0.8773	N/A	no
O04009	DCAM_TOBAC	4, ., 1, ., 1, ., 5, 0	0.7	0.9589	0.9058	N/A	no
O49972	DCAM2_BRAJU	4, ., 1, ., 1, ., 5, 0	0.6317	0.9501	0.8780	N/A	no
Q04694	DCAM_SOLTU	4, ., 1, ., 1, ., 5, 0	0.6829	0.9501	0.9	N/A	no
P46255	DCAM_SPIOL	4, ., 1, ., 1, ., 5, 0	0.6666	0.9736	0.9146	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	4.1.1.50	0.991
3rd Layer	4.1.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	341
PLN02524	355	PLN02524, PLN02524, S-adenosylmethionine decarboxy	0.0
pfam01536	328	pfam01536, SAM_decarbox, Adenosylmethionine decarb	1e-175
TIGR00535	334	TIGR00535, SAM_DCase, S-adenosylmethionine decarbo	1e-143

>gnl|CDD|215287 PLN02524, PLN02524, S-adenosylmethionine decarboxylase

 Score =  568 bits (1465), Expect = 0.0
 Identities = 237/357 (66%), Positives = 274/357 (76%), Gaps = 27/357 (7%)

Query: 8   MAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDE 67
           M VSAIGFEG+EKRLEI+FFEP +F DP G+GLR LT++QLDEIL PAECTIVSSLSND+
Sbjct: 1   MPVSAIGFEGFEKRLEITFFEPPVFADPNGRGLRALTRSQLDEILRPAECTIVSSLSNDQ 60

Query: 68  VDSYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPG 127
            DSYVLSESSLFVY YKIIIKTCGTTKLLLSIPP+L+LA  LSL+VRSV+YTRGSFIFPG
Sbjct: 61  FDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPLLELAARLSLSVRSVKYTRGSFIFPG 120

Query: 128 NQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEP-LISSDPVFT 186
            Q +PHR+FSEEV+VLD +FGKL  G  AY++G   K QKWHVYSASA     S++PV+T
Sbjct: 121 AQPFPHRSFSEEVSVLDGHFGKLGLGGKAYVMGDPDKGQKWHVYSASAHNSSNSNEPVYT 180

Query: 187 IEMCLTGLDREMASVFYKTQS-GSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG 245
           +EMC+TGLDRE ASVF+K  S  SA  MT  SGIRKILP+S+ICDF FDPCGYSMN +EG
Sbjct: 181 LEMCMTGLDREKASVFFKDSSLSSAEEMTKASGIRKILPESEICDFAFDPCGYSMNGIEG 240

Query: 246 AAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMI 305
            AIST+HVTPEDGFSYASFE +GYDP D++L+QLVERVLACF+P++FS+AVHA V G+  
Sbjct: 241 DAISTIHVTPEDGFSYASFEAMGYDPGDLDLSQLVERVLACFKPKEFSVAVHANVGGEAG 300

Query: 306 EQKCLLN-----------------------KFVKTEGNGSPRSTLKCYWKEEEEYEE 339
              C L+                        F  T G GSPRSTLK  W E E  E 
Sbjct: 301 SWGCSLDPDGYSCKGRSCQELPGGGSVVYQTFTATGGCGSPRSTLK--WSENESCES 355

Length = 355

>gnl|CDD|216558 pfam01536, SAM_decarbox, Adenosylmethionine decarboxylase

 Score =  488 bits (1259), Expect = e-175
 Identities = 202/301 (67%), Positives = 235/301 (78%), Gaps = 10/301 (3%)

Query: 10  VSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVD 69
            SAIGFEG EKRLEI FFE S F D  GKGLR L+K+Q DE+L PAECTIVSSLSN+ +D
Sbjct: 1   ESAIGFEGPEKRLEIWFFE-SPFSDTHGKGLRALSKSQWDEVLDPAECTIVSSLSNEYID 59

Query: 70  SYVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQ 129
           SYVLSESSLFV  Y+II+KTCGTT LLLSIPPIL+LAE LSL V+SV Y+R +FIFPG Q
Sbjct: 60  SYVLSESSLFVSKYRIILKTCGTTTLLLSIPPILELAEALSLEVQSVFYSRKNFIFPGAQ 119

Query: 130 LYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEM 189
            YPHR+FSEEVA LDS+F     G  AY +G   K QKWH+YSASA P  SSDP +T+EM
Sbjct: 120 PYPHRSFSEEVAYLDSHFP----GGKAYCMGPPDKDQKWHLYSASAPPSESSDPDYTLEM 175

Query: 190 CLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKIC-DFEFDPCGYSMNSVEGAAI 248
            +TGLD+E ASVF+K +S SA  MT  SGIRKILP+S IC DF+F+PCGYSMN++EG A 
Sbjct: 176 LMTGLDKEKASVFFKDESSSAADMTEASGIRKILPNSAICHDFDFEPCGYSMNAIEGDAY 235

Query: 249 STVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHA-EVAGKMIEQ 307
           ST+HVTPEDGFSYASFET       +NL+ L+ RVL CFQP +FS+ V A  VAGK +EQ
Sbjct: 236 STIHVTPEDGFSYASFETN---LKALNLSDLIRRVLNCFQPSEFSVTVFASSVAGKTLEQ 292

Query: 308 K 308
           K
Sbjct: 293 K 293

This is a family of S-adenosylmethionine decarboxylase (SAMDC) proenzymes. In the biosynthesis of polyamines SAMDC produces decarboxylated S-adenosylmethionine, which serves as the aminopropyl moiety necessary for spermidine and spermine biosynthesis from putrescine. The Pfam alignment contains both the alpha and beta chains that are cleaved to form the active enzyme. Length = 328

>gnl|CDD|233012 TIGR00535, SAM_DCase, S-adenosylmethionine decarboxylase proenzyme, eukaryotic form

 Score =  407 bits (1047), Expect = e-143
 Identities = 168/309 (54%), Positives = 208/309 (67%), Gaps = 16/309 (5%)

Query: 15  FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
           FEG EK LEI FFE   F+  EGKGLR + +AQ+DEIL  A CTI+SS  N  +DSYVLS
Sbjct: 1   FEGPEKLLEIWFFEHKKFI-DEGKGLRAIGRAQIDEILDLARCTILSSKKNKSLDSYVLS 59

Query: 75  ESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLS--LNVRSVRYTRGSFIFPGNQLYP 132
           ESSLF+Y +KIIIKTCGTTKLL ++P IL+LAE LS    V SV Y+RG F+FP  Q   
Sbjct: 60  ESSLFIYDHKIIIKTCGTTKLLFALPKILQLAEQLSSWYKVFSVFYSRGCFLFPCAQPAI 119

Query: 133 HRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEP--LISSDPVFTIEMC 190
           HRNFSEEVA L+ +FG       AY++G   KPQKWH+Y A  E       DP  T+EM 
Sbjct: 120 HRNFSEEVAYLNKFFGNG----KAYVVGDPAKPQKWHLYVAETERETPKIEDPDETLEML 175

Query: 191 LTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPDS-KICDFEFDPCGYSMNSVEG 245
           +TGLD+E AS F+K  + S       MT NSGI KI+P+S +ICDF+F+PCGYSMN++ G
Sbjct: 176 MTGLDKEKASKFFKGPAASTHNLGYQMTKNSGIDKIIPNSAQICDFDFEPCGYSMNAILG 235

Query: 246 A-AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVA-GK 303
             A ST+HVTPE GFSYASFE+ G D    +   LV RVL CFQP +FS+ V A+    +
Sbjct: 236 EKAYSTIHVTPEKGFSYASFESNGIDQGKQDYLDLVLRVLNCFQPSEFSMTVFAKNYQNQ 295

Query: 304 MIEQKCLLN 312
             ++   +N
Sbjct: 296 SFQKLLSIN 304

This enzyme is a key regulatory enzyme of the polyamine synthetic pathway. This protein is a pyruvoyl-dependent enzyme. The proenzyme is cleaved at a Ser residue that becomes a pyruvoyl group active site [Central intermediary metabolism, Polyamine biosynthesis]. Length = 334

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	341
PLN02524	355	S-adenosylmethionine decarboxylase	100.0
TIGR00535	334	SAM_DCase S-adenosylmethionine decarboxylase proen	100.0
PF01536	331	SAM_decarbox: Adenosylmethionine decarboxylase; In	100.0
KOG0788	334	consensus S-adenosylmethionine decarboxylase [Sign	100.0
TIGR03330	112	SAM_DCase_Bsu S-adenosylmethionine decarboxylase p	95.99
PRK04025	139	S-adenosylmethionine decarboxylase proenzyme; Vali	95.47
PF02675	106	AdoMet_dc: S-adenosylmethionine decarboxylase ; In	95.23
PRK01706	123	S-adenosylmethionine decarboxylase proenzyme; Vali	95.03
PRK02770	139	S-adenosylmethionine decarboxylase proenzyme; Prov	94.59
PRK03124	127	S-adenosylmethionine decarboxylase proenzyme; Prov	94.34
PRK01236	131	S-adenosylmethionine decarboxylase proenzyme; Prov	93.41
PRK00458	127	S-adenosylmethionine decarboxylase proenzyme; Prov	91.95
COG1586	136	SpeD S-adenosylmethionine decarboxylase [Amino aci	89.98

>PLN02524 S-adenosylmethionine decarboxylase

Probab=100.00  E-value=7.2e-126  Score=924.33  Aligned_cols=328  Identities=72%  Similarity=1.179  Sum_probs=303.7

Q ss_pred             ccCCCCCCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEe
Q 019411            9 AVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIK   88 (341)
Q Consensus         9 ~~s~~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILK   88 (341)
                      ++++.+|||+||||||||++++.+.++.++|||+|||++|++||+.|+|+|||+++|+++||||||||||||||+|||||
T Consensus         2 ~~~~~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~l~~~~w~~iL~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILK   81 (355)
T PLN02524          2 PVSAIGFEGFEKRLEITFFEPPVFADPNGRGLRALTRSQLDEILRPAECTIVSSLSNDQFDSYVLSESSLFVYPYKIIIK   81 (355)
T ss_pred             CCCCCCccccceEEEEEEecCcccCCCCCCccccCCHHHHHHHHHHcCCEEEeecccCCceeeeecceeEEEECCEEEEE
Confidence            56788999999999999998765556778999999999999999999999999999999999999999999999999999


Q ss_pred             ccCchhhhcchHHHHHHHHHhCceeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCCcE
Q 019411           89 TCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKW  168 (341)
Q Consensus        89 TCGTTtLL~al~~ll~la~~~~~~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~~W  168 (341)
                      ||||||||+|||+||++|+++|++|++|+||||||+||++|++||++|++||++|+++|++|+.+|+||+||+++++|||
T Consensus        82 TCGTT~LL~~i~~ll~la~~~~l~v~~v~YsRknf~fP~~Q~~pH~sf~eEV~~L~~~F~~l~~~G~AY~~G~~~~~~hW  161 (355)
T PLN02524         82 TCGTTKLLLSIPPLLELAARLSLSVRSVKYTRGSFIFPGAQPFPHRSFSEEVSVLDGHFGKLGLGGKAYVMGDPDKGQKW  161 (355)
T ss_pred             eCCcccHHHHHHHHHHHHHHcCCceeEEEEecccccCcccCCCcccCHHHHHHHHHHhcccccCCceEEEeCCCCCCCce
Confidence            99999999999999999999999999999999999999999999999999999999999999889999999998767999


Q ss_pred             EEEecCCCCCC-CCCCceeEEEeecCCCHhhhhccccCCC-CcHHHHHHHhCCcccCCCCcccccCCCCCcccccccCCC
Q 019411          169 HVYSASAEPLI-SSDPVFTIEMCLTGLDREMASVFYKTQS-GSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA  246 (341)
Q Consensus       169 ~lY~~~~~~~~-~~~~D~TlEIlMt~Ld~~~a~~F~~~~~-~~~~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~  246 (341)
                      |||+++..... ..++|+|+|||||+||+++|++||++++ ++|++||+.+||++|+|++.||||+|+|||||||||.|+
T Consensus       162 ~lY~a~~~~~~~~~~~d~TlEilMt~Ld~~~a~~F~~~~~~~s~~~~t~~sgI~~i~P~~~iddf~F~PCGYSmN~i~g~  241 (355)
T PLN02524        162 HVYSASAHNSSNSNEPVYTLEMCMTGLDREKASVFFKDSSLSSAEEMTKASGIRKILPESEICDFAFDPCGYSMNGIEGD  241 (355)
T ss_pred             EEEeCCCcccccCCCCCeEEEEEccCCCHHHHhhhhhCcccccHHHHHHhhChhhhCCCCeecccccCCCcccccccCCC
Confidence            99999876432 2589999999999999999999999987 899999999999999999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccccchhhhhcccc--------------
Q 019411          247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLN--------------  312 (341)
Q Consensus       247 ~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~~~~~~~~~~~~--------------  312 (341)
                      +|+|||||||++|||||||||++|....++.+||+|||+||+|++|+||+|++.......+...++              
T Consensus       242 ~y~TIHVTPE~~~SYaSFEtn~~~~~~~~~~~lv~rVl~~F~P~~fsvt~~~~~~~~~~~~~~~~~~~gY~~~~~~~~~l  321 (355)
T PLN02524        242 AISTIHVTPEDGFSYASFEAMGYDPGDLDLSQLVERVLACFKPKEFSVAVHANVGGEAGSWGCSLDPDGYSCKGRSCQEL  321 (355)
T ss_pred             ceEEEEECCCCCCeEEEEEeccCCccccCHHHHHHHHHhhcCCceEEEEEEecCccchhccccccCcCCceecCcEEEec
Confidence            999999999999999999999988888899999999999999999999999987555443333222              


Q ss_pred             ---------ceecccCCCCCCccccccccchhhhc
Q 019411          313 ---------KFVKTEGNGSPRSTLKCYWKEEEEYE  338 (341)
Q Consensus       313 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (341)
                               +|.+...|++|||+|+  |++++.++
T Consensus       322 ~~~~~l~y~~f~~~~~~~~~~~~~~--~~~~~~~~  354 (355)
T PLN02524        322 PGGGSVVYQTFTATGGCGSPRSTLK--WSENESCE  354 (355)
T ss_pred             CCCcEEEEEEEEecCCCCCchhhhc--cchhcccc
Confidence                     7877778999999999  99776554

>TIGR00535 SAM_DCase S-adenosylmethionine decarboxylase proenzyme, eukaryotic form

Probab=100.00  E-value=5.7e-119  Score=870.16  Aligned_cols=282  Identities=59%  Similarity=0.931  Sum_probs=266.0

Q ss_pred             CCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEeccCchh
Q 019411           15 FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGTTK   94 (341)
Q Consensus        15 FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILKTCGTTt   94 (341)
                      |||+||||||||.+++.. .+.++|||+|||++|++||++|+|+|||+++|+++||||||||||||||||||||||||||
T Consensus         1 FEG~EKrLEI~F~~~~~~-~~~~~gLR~l~~~~w~~iL~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILKTCGTTt   79 (334)
T TIGR00535         1 FEGPEKLLEIWFFEHKKF-IDEGKGLRAIGRAQIDEILDLARCTILSSKKNKSLDSYVLSESSLFIYDHKIIIKTCGTTK   79 (334)
T ss_pred             CCCcceEEEEEEecCCcC-CCCCCChhhCCHHHHHHHHHhhCcEEeeeccCCceeEeEeccceeeEECCEEEEEeCCCch
Confidence            999999999999976533 2677999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcchHHHHHHHHHh-Cc-eeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCCcEEEEe
Q 019411           95 LLLSIPPILKLAETL-SL-NVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYS  172 (341)
Q Consensus        95 LL~al~~ll~la~~~-~~-~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~~W~lY~  172 (341)
                      ||+|||+||++|+++ |+ .|++|+||||||+||++|++||++|+|||++|+++|+    +|+||+||++++++|||||+
T Consensus        80 LL~~l~~ll~~a~~~~g~~~v~~v~YsRksf~fP~~Q~~pH~sf~eEV~~L~~~F~----~g~AY~~G~~~~~~~WhlY~  155 (334)
T TIGR00535        80 LLFALPKILQLAEQLSSWYKVFSVFYSRGCFLFPCAQPAIHRNFSEEVAYLNKFFG----NGKAYVVGDPAKPQKWHLYV  155 (334)
T ss_pred             HHHHHHHHHHHHHHhcCcCceeEEEEecccccCcccCCCcCCCHHHHHHHHHHhcC----CCceEEeCCCCCCCceEEEe
Confidence            999999999999988 54 6899999999999999999999999999999999998    69999999999889999999


Q ss_pred             cCCCCCC--CCCCceeEEEeecCCCHhhhhccccCCCCc----HHHHHHHhCCcccCCC-CcccccCCCCCcccccccCC
Q 019411          173 ASAEPLI--SSDPVFTIEMCLTGLDREMASVFYKTQSGS----AGAMTVNSGIRKILPD-SKICDFEFDPCGYSMNSVEG  245 (341)
Q Consensus       173 ~~~~~~~--~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~----~~~~t~~sGI~~l~P~-~~id~~~F~PCGYSmNgi~~  245 (341)
                      +..+...  ..++|+|+|||||+||+++|++||+++.++    |.+||+.+||++|+|+ +.||||+|+|||||||||.|
T Consensus       156 ~~~~~~~~~~~~~d~TlEilMt~Ld~~~a~~F~~~~~~~~h~~~~~~t~~sgI~~i~P~~~~iddf~F~PCGYSmNgi~~  235 (334)
T TIGR00535       156 AETERETPKIEDPDETLEMLMTGLDKEKASKFFKGPAASTHNLGYQMTKNSGIDKIIPNSAQICDFDFEPCGYSMNAILG  235 (334)
T ss_pred             CCCCccccCCCCCceEeeeecccCCHHHHHhheeCcCCCccchHHHHHHHhChHhhcCCcceeecccccCCcCccccccC
Confidence            8765422  346899999999999999999999999888    9999999999999999 99999999999999999998


Q ss_pred             -CceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccc
Q 019411          246 -AAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVA  301 (341)
Q Consensus       246 -~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~  301 (341)
                       ++|+|||||||++|||||||||+++....++.+||+|||++|+|++|+||+|++.+
T Consensus       236 ~~~Y~TIHITPE~~~SYaSFEtn~~~~~~~~~~~li~~vl~~F~P~~f~vt~f~~~~  292 (334)
T TIGR00535       236 EKAYSTIHVTPEKGFSYASFESNGIDQGKQDYLDLVLRVLNCFQPSEFSMTVFAKNY  292 (334)
T ss_pred             CCcEEEEEEcCCCCceEEEEeeccCCcccccHHHHHHHHHHhcCCceEEEEEEecCc
Confidence             79999999999999999999998887888999999999999999999999999865

This protein is a pyruvoyl-dependent enzyme. The proenzyme is cleaved at a Ser residue that becomes a pyruvoyl group active site.

>PF01536 SAM_decarbox: Adenosylmethionine decarboxylase; InterPro: IPR001985 S-adenosylmethionine decarboxylase (AdoMetDC) [] catalyzes the removal of the carboxylate group of S-adenosylmethionine to form S-adenosyl-5'-3-methylpropylamine which then acts as the n-propylamine group donor in the synthesis of the polyamines spermidine and spermine from putrescine

Probab=100.00  E-value=3.3e-118  Score=868.01  Aligned_cols=287  Identities=48%  Similarity=0.802  Sum_probs=237.2

Q ss_pred             CCCCCCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEecc
Q 019411           11 SAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTC   90 (341)
Q Consensus        11 s~~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILKTC   90 (341)
                      ++++|||+||||||||.++.....+++.|||+|||++|++||++|+|+|||+++|+++||||||||||||||+|||||||
T Consensus         1 s~~~FEG~EK~LEi~F~~~~~~~~~~~~~LR~i~~~~w~~~L~~a~C~Ils~~sn~~~dAYvLSESSLFV~~~kiilKTC   80 (331)
T PF01536_consen    1 STDFFEGPEKRLEIWFSPPSVFSEPSARGLRSIPREFWDEMLDLAGCEILSEISNEHMDAYVLSESSLFVYPHKIILKTC   80 (331)
T ss_dssp             -------SEEEEEEEEE----------S-GGGS-HHHHHHHHHHCT-EEEEEEE-SSEEEEEEETEEEEEETTEEEEEEE
T ss_pred             CCCCccccceEEEEEEecCCcCCCCCccccccCCHHHHHHHHHhcCCEEEEEEccCceeEEEccCceEEEECCEEEEEEc
Confidence            46899999999999999865445567899999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhcchHHHHHHHHHhCceeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCCcEEE
Q 019411           91 GTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHV  170 (341)
Q Consensus        91 GTTtLL~al~~ll~la~~~~~~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~~W~l  170 (341)
                      ||||||+|||+||++|++++.+|+||+||||||+||++|++||++|++||++|+++|+    +|+||++|++|++|||||
T Consensus        81 GtT~Ll~~l~~ll~la~~~~~~v~~v~YsRknf~~P~~Q~~ph~sf~~Ev~~L~~~F~----~G~aY~~G~~~~d~~wyl  156 (331)
T PF01536_consen   81 GTTTLLKALPPLLELAKELGDEVEWVFYSRKNFMFPELQPSPHRSFEEEVAYLDSFFP----SGKAYVMGPLDSDHHWYL  156 (331)
T ss_dssp             TTS-GGGGHHHHHHHHHHCC-EEEEEEEEEE--SSGGGS-TTSSSHHHHHHHHHCCHT----SEEEEEECSTTSS-EEEE
T ss_pred             cchhHHHHHHHHHHHHHHhccceeEEEEecccCCCcccCCCccCCHHHHHHHHHHHCC----CCcEEEeCCCCCCceEEE
Confidence            9999999999999999999999999999999999999999999999999999999998    799999999999779999


Q ss_pred             EecCCCCCCCCCCceeEEEeecCCCHhhhhccccCCCCcHHHHHHHhCCcccCCCCccc-ccCCCCCcccccccCCCceE
Q 019411          171 YSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKIC-DFEFDPCGYSMNSVEGAAIS  249 (341)
Q Consensus       171 Y~~~~~~~~~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~~~~~t~~sGI~~l~P~~~id-~~~F~PCGYSmNgi~~~~Y~  249 (341)
                      |+++.+....+++|+|||||||+|||++|++||+++.++|++||+++||++|+|++.|| ||+|+||||||||+.|+.|+
T Consensus       157 y~~~~~~~~~~~~D~TLEILMt~Ld~~~~~~F~~~~~~~~~~~t~~sgi~~l~p~~~i~~~f~F~PCGYS~N~~~~~~Y~  236 (331)
T PF01536_consen  157 YTADTPESSSSEPDQTLEILMTDLDPEVASQFYRSESQSGEEITKASGIDDLFPGFEIDDDFLFEPCGYSMNGIDGDRYY  236 (331)
T ss_dssp             EEEESSS-S-SS--EEEEEEEECE-HHHHHCCC-BTTB-HHHHHHHTTGGGCSTTSEEE-EEE-SSC-EEEEEECTTEEE
T ss_pred             EecCccccccCCCccchhhhhccCCHHHHHHHhcCCCccHHHHHHhhhhhcccCCcccccccccCCccccccCCCCCeEE
Confidence            99987654456899999999999999999999999999999999999999999999999 99999999999999999999


Q ss_pred             EEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccc
Q 019411          250 TVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVA  301 (341)
Q Consensus       250 TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~  301 (341)
                      |||||||++|||||||||+++....++.+||+|||++|||++|+||+|+...
T Consensus       237 TIHVTPE~~~SYaSFEtn~~~~~~~~~~~li~~vl~~F~P~~f~~t~f~~~~  288 (331)
T PF01536_consen  237 TIHVTPEEGFSYASFETNVYDFSQESYDDLIRKVLNIFKPGKFSVTLFASSN  288 (331)
T ss_dssp             EEEEE--TTS-EEEEEEES--TTTS-CHHHHHHHHHHH-ECEEEEEEEECTS
T ss_pred             EEEECCCCCceEEEEEeccCCcCcCCHHHHHHHHHheeCCcEEEEEEEecCC
Confidence            9999999999999999998778888999999999999999999999998533

The catalytic mechanism of AdoMetDC involves a covalently-bound pyruvoyl group. This group is post-translationally generated by a self-catalyzed intramolecular proteolytic cleavage reaction between a glutamate and a serine. This cleavage generates two chains, beta (N-terminal) and alpha (C-terminal). The N-terminal serine residue of the alpha chain is then converted by nonhydrolytic serinolysis into a pyruvyol group.; GO: 0004014 adenosylmethionine decarboxylase activity, 0006597 spermine biosynthetic process, 0008295 spermidine biosynthetic process; PDB: 3EP7_A 3EPA_B 3DZ5_A 3DZ2_B 3EPB_B 3DZ7_A 3EP6_A 3EP4_A 1JEN_A 3H0V_B ....

>KOG0788 consensus S-adenosylmethionine decarboxylase [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-117  Score=841.24  Aligned_cols=299  Identities=56%  Similarity=0.909  Sum_probs=282.3

Q ss_pred             cCCCCCCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEec
Q 019411           10 VSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKT   89 (341)
Q Consensus        10 ~s~~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILKT   89 (341)
                      +++.+|||+||||||||.++..+.+.+++|||+|+|++||+||+.|+|+|||.++|+.+||||||||||||||+||||||
T Consensus         2 ~~a~~FEG~EKlLEvwF~~~~~~~~~~~~~LR~i~rs~~DeiL~~v~C~IvS~~~n~~~dayvLSESSlFV~~~kiIlKT   81 (334)
T KOG0788|consen    2 VSATGFEGPEKLLEVWFFEPKKFSDKGGKGLRAISKSQWDEILKEVQCTIVSSLKNDEIDAYVLSESSLFVFKRKIILKT   81 (334)
T ss_pred             CcccccccchheEEEEEccCccccccCCccccccChhHHHHHhhhhceeEEeecccchhhhheecccceeEeeeEEEEEe
Confidence            45679999999999999988776677889999999999999999999999999999999999999999999999999999


Q ss_pred             cCchhhhcchHHHHHHHHHhC-ceeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCCcE
Q 019411           90 CGTTKLLLSIPPILKLAETLS-LNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKW  168 (341)
Q Consensus        90 CGTTtLL~al~~ll~la~~~~-~~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~~W  168 (341)
                      ||||+||+|||+||+||+++| ..|.+++||||||++|..|++||++|++||+||+++||    +|+|||||+.++.+||
T Consensus        82 CGTT~lL~sL~pLlkLA~~~~~~~v~~v~YSRknFl~P~~Q~~pH~sf~eEV~~L~~~F~----~g~ay~mG~~~~s~~W  157 (334)
T KOG0788|consen   82 CGTTLLLKALVPLLKLAGELSFDSVQSVFYSRKNFLFPGAQPYPHTSFDEEVEYLDKFFP----NGKAYCMGLNMNSKCW  157 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHhcccchHhheeccccccCcccCCCCCcCHHHHHHHHHHhcC----CCceEEecCCCCCCce
Confidence            999999999999999999999 67999999999999999999999999999999999998    7999999954556999


Q ss_pred             EEEecCCCCC--CCCCCceeEEEeecCCCHhhhhccccCCCCcHHHHHHHhCCcccCCCCcccccCCCCCcccccccCCC
Q 019411          169 HVYSASAEPL--ISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA  246 (341)
Q Consensus       169 ~lY~~~~~~~--~~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~~~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~  246 (341)
                      |||++.....  ...+||+|||||||+|||++|.+||+++.++|.+||+.|||++|+|+++||||+|+||||||||+.++
T Consensus       158 ~lys~~~~~e~~~~~~~d~TlEvlMt~LD~e~a~~Fyk~~~~~a~~mT~~SGI~~I~p~s~iddf~F~PCGYSmN~~~~d  237 (334)
T KOG0788|consen  158 HLYSASADDESNVIDEPDYTLEVCMTELDPEKASVFYKNNAVSAKEMTDESGIDDILPGSVIDDFAFEPCGYSMNGIDGD  237 (334)
T ss_pred             EEEeccccccccccCCCceeHHHHHhhhChhhhheeecccccccccchhhcchhhcCCcceeeccccccccccccCcCCc
Confidence            9999987643  34789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccccchhhhhcccc
Q 019411          247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLN  312 (341)
Q Consensus       247 ~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~~~~~~~~~~~~  312 (341)
                      +|+|||||||++|||||||||++|+...++.++|+|||+||+|++|+||+|++.+++..+.....+
T Consensus       238 ~y~TIHVTPE~~fSYaSFEt~~~~~~~~~~~~li~kvl~~F~P~kfs~t~f~n~~~~~~~~~~~~~  303 (334)
T KOG0788|consen  238 AYSTIHVTPEDGFSYASFETVGYDQGLLDLSELISKVLNCFKPNKFSVTVFANYGSESYKHLLSKD  303 (334)
T ss_pred             eEEEEEeccccCceEEEEEeeccccccccHHHHHHHHHHhcCcCcEEEEEEeeccchhhhhhhhhh
Confidence            999999999999999999999999999999999999999999999999999998888865554444

>TIGR03330 SAM_DCase_Bsu S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Probab=95.99  E-value=0.028  Score=47.64  Aligned_cols=81  Identities=16%  Similarity=0.244  Sum_probs=60.9

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+..|..-+    .+.-+.|+|.|+|.=.|..+...+||.=||.+  ||.+..=-++ ...+....++-+.+.|+|+
T Consensus        30 ~~a~~~~g~ti~----~~~~h~F~p~Gvt~v~llaESHisiHTwPE~g--yaavDiftCg-~~~~p~~a~~~l~~~f~~~  102 (112)
T TIGR03330        30 LEAAKVAGATLV----ASHFHKFSPGGVSGVVLLAESHISIHTWPEYG--YAAVDVFTCG-DHSDPEKAFEYLVEALKPK  102 (112)
T ss_pred             HHHHHHcCCEEE----EEEEEEcCCCcEEEEEEecccEEEEEeccCCC--cEEEEEEecC-CCCCHHHHHHHHHHHhCCC
Confidence            345555554422    24678999999999999999999999999976  5665542122 2247889999999999999


Q ss_pred             eEEEEEEE
Q 019411          291 DFSIAVHA  298 (341)
Q Consensus       291 ~f~vtlf~  298 (341)
                      +..++...
T Consensus       103 ~~~~~~~~  110 (112)
T TIGR03330       103 RVEVRELD  110 (112)
T ss_pred             eEEEEEEe
Confidence            99988654

Members of this protein family are the single chain precursor of the two chains of the mature S-adenosylmethionine decarboxylase as found in Methanocaldococcus jannaschii, Bacillus subtilis, and a wide range of other species. It differs substantially in architecture from the form as found in Escherichia coli, and lacks any extended homology to the eukaryotic form (TIGR00535).

>PRK04025 S-adenosylmethionine decarboxylase proenzyme; Validated

Probab=95.47  E-value=0.053  Score=47.86  Aligned_cols=83  Identities=18%  Similarity=0.255  Sum_probs=63.8

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+..|..-+    .+..+.|+|=|+|.-+|..+...+||.=||.+  ||.+..=-++ ...+....++.+.+.|+|+
T Consensus        31 ~~Aa~~~gatil----~~~~h~F~P~GvTgv~lLaESHisIHTwPE~g--yaavDIftCg-~~~~p~~a~~~L~~~f~~~  103 (139)
T PRK04025         31 LEAAKRGNMEVK----ASYFFKFSPTGVSGVVIVAESHISVHTWPEKG--YAALDVYTCG-EKADPEKAVDYILEQFKAK  103 (139)
T ss_pred             HHHHHHcCCeEE----EEEEEEcCCCcEEEEEEeccceEEEEecccCC--eEEEEEEecC-CCCCHHHHHHHHHHHhCCC
Confidence            355555664432    35779999999999999999999999999975  5665552122 2247889999999999999


Q ss_pred             eEEEEEEEcc
Q 019411          291 DFSIAVHAEV  300 (341)
Q Consensus       291 ~f~vtlf~~~  300 (341)
                      +..++.+...
T Consensus       104 ~~~~~~l~RG  113 (139)
T PRK04025        104 YAHVSEIKRG  113 (139)
T ss_pred             eEEEEEEeCC
Confidence            9999987764

>PF02675 AdoMet_dc: S-adenosylmethionine decarboxylase ; InterPro: IPR003826 Polyamines such as spermidine and spermine are essential for cellular growth under most conditions, being implicated in a large number of cellular processes including DNA, RNA and protein synthesis

Probab=95.23  E-value=0.018  Score=47.82  Aligned_cols=80  Identities=18%  Similarity=0.324  Sum_probs=57.9

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+..|+..+    .+.-+.|+|=|+|.=++..+...+||.=||.++-++-.=|.  +  ..+...+++.+.+.|+|+
T Consensus        25 ~~a~~~~g~~~~----~~~~~~f~p~GvT~~~ll~ESHisiHTwPE~~~~avDiftC--~--~~~p~~a~~~l~~~f~~~   96 (106)
T PF02675_consen   25 RDAAKAAGLTVL----SISFHKFEPQGVTGVALLAESHISIHTWPEHGYAAVDIFTC--G--EFDPEKAIEYLKKAFKPD   96 (106)
T ss_dssp             HHHHHHCT-EEE----EEEEEE-SSS-EEEEEEETTEEEEEEEEGGGTEEEEEEEEE--S--THHHHHHHHHHHHHHT-S
T ss_pred             HHHHHHcCCEEE----EEEEEEcCCCcEEEEEEhhccEEEEEeCCCcCeEEEEEEEc--C--CCCHHHHHHHHHHHhCCC
Confidence            345555566443    24678999999999999999999999999999544443343  2  247889999999999999


Q ss_pred             eEEEEEEE
Q 019411          291 DFSIAVHA  298 (341)
Q Consensus       291 ~f~vtlf~  298 (341)
                      ++.++...
T Consensus        97 ~~~~~~i~  104 (106)
T PF02675_consen   97 KVKITEIK  104 (106)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEe
Confidence            99988653

S-adenosylmethionine decarboxylase (AdoMetDC) plays an essential regulatory role in the polyamine biosynthetic pathway by generating the n-propylamine residue required for the synthesis of spermidine and spermine from putrescein [, ]. Unlike many amino acid decarboxylases AdoMetDC uses a covalently bound pyruvate residue as a cofactor rather than the more common pyridoxal 5'-phosphate. These proteins can be divided into two main groups which show little sequence similarity either to each other, or to other pyruvoyl-dependent amino acid decarboxylases: class I enzymes found in bacteria and archaea, and class II enzymes found in eukaryotes. In both groups the active enzyme is generated by the post-translational autocatalytic cleavage of a precursor protein. This cleavage generates the pyruvate precursor from an internal serine residue and results in the formation of two non-identical subunits termed alpha and beta which form the active enzyme. Members of this family are related to the amino terminus of Escherichia coli S-adenosylmethionine decarboxylase.; GO: 0004014 adenosylmethionine decarboxylase activity, 0008295 spermidine biosynthetic process; PDB: 1VR7_A 3IWC_D 3IWD_D 3IWB_C 1TMI_A 1TLU_A 2III_A.

>PRK01706 S-adenosylmethionine decarboxylase proenzyme; Validated

Probab=95.03  E-value=0.075  Score=45.96  Aligned_cols=82  Identities=17%  Similarity=0.311  Sum_probs=62.5

Q ss_pred             HHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCce
Q 019411          212 AMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRD  291 (341)
Q Consensus       212 ~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~  291 (341)
                      +..+..|..-+    .+..+.|+|=|.|.=+|..+...+||.=||.+  ||.+..=-++ ...+....++.+.+.|+|++
T Consensus        34 ~aa~~~g~tiv----~~~~h~F~p~GvTgv~llaESHisIHTwPE~g--yaavDiftCg-~~~~p~~a~~~L~~~l~~~~  106 (123)
T PRK01706         34 EAADLSGAHVL----NVSTKEFDPQGVTVLVLLSESHLSIHTYPEKN--FAAIDCYTCG-TTVEPQIAIDYIVSILKPNE  106 (123)
T ss_pred             HHHHHcCCeEE----EEEEEEcCCCcEEEEEEeeccEEEEEeCccCC--eEEEEEEecC-CCCCHHHHHHHHHHHhCCCe
Confidence            44444554322    34679999999999999999999999999976  6777652122 22478999999999999999


Q ss_pred             EEEEEEEcc
Q 019411          292 FSIAVHAEV  300 (341)
Q Consensus       292 f~vtlf~~~  300 (341)
                      ..++.+...
T Consensus       107 ~~~~~~~RG  115 (123)
T PRK01706        107 MHIKRLIRG  115 (123)
T ss_pred             EEEEEEecC
Confidence            999876653

>PRK02770 S-adenosylmethionine decarboxylase proenzyme; Provisional

Probab=94.59  E-value=0.092  Score=46.39  Aligned_cols=82  Identities=13%  Similarity=0.276  Sum_probs=63.0

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+..|..-+    .+..+.|+|=|+|.-+|..+...+||.=||.+  ||.+..=-++ ...+....++.+.+.|+|+
T Consensus        44 ~~Aa~~~gativ----~~~~h~F~P~GvTgv~lLaESHisIHTwPE~g--yaavDiftCg-~~~~p~~a~~~L~~~l~~~  116 (139)
T PRK02770         44 TEAAKRAGATLL----NLITHRFEPQGVTALALLAESHISIHTWPESG--YAAVDVFTCG-DHTMPEKACQYLIEELMAK  116 (139)
T ss_pred             HHHHHHcCCEEE----EEEeEEcCCCeEEEEEEecccEEEEEeCcCCC--cEEEEEEecC-CCCCHHHHHHHHHHHhCCC
Confidence            355556664432    35779999999999999999999999999975  5665552122 2247889999999999999


Q ss_pred             eEEEEEEEc
Q 019411          291 DFSIAVHAE  299 (341)
Q Consensus       291 ~f~vtlf~~  299 (341)
                      +..++-+..
T Consensus       117 ~~~~~~~~R  125 (139)
T PRK02770        117 RHSLRSIER  125 (139)
T ss_pred             eEEEEEEec
Confidence            999987765

>PRK03124 S-adenosylmethionine decarboxylase proenzyme; Provisional

Probab=94.34  E-value=0.12  Score=44.87  Aligned_cols=83  Identities=17%  Similarity=0.172  Sum_probs=63.1

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+.+|..-+    .+..+.|+|=|.|.=+|..+...+||.=||.+  ||.+..=.++ ...+....++.+.+.|+|+
T Consensus        31 ~~a~~~~g~til----~~~~h~F~p~GvTgv~llaESHisIHTwPE~g--yaavDiftCg-~~~~p~~a~~~L~~~f~~~  103 (127)
T PRK03124         31 VDAALEAGAEVR----EVAFHKFSPQGVSGVVVISESHLTIHTWPELG--YAAVDVFTCG-DRVDPWDACNYIAEGLGAK  103 (127)
T ss_pred             HHHHHHcCCeEE----EEEeEEcCCCcEEEEEEeeccEEEEEeCccCC--eEEEEEEecC-CCCCHHHHHHHHHHHhCCC
Confidence            345555564322    35779999999999999999999999999975  6776652122 2247889999999999999


Q ss_pred             eEEEEEEEcc
Q 019411          291 DFSIAVHAEV  300 (341)
Q Consensus       291 ~f~vtlf~~~  300 (341)
                      +..++.+...
T Consensus       104 ~~~~~~~~RG  113 (127)
T PRK03124        104 TREAIELKRG  113 (127)
T ss_pred             eEEEEEEecC
Confidence            9998876653

>PRK01236 S-adenosylmethionine decarboxylase proenzyme; Provisional

Probab=93.41  E-value=0.26  Score=43.08  Aligned_cols=82  Identities=15%  Similarity=0.265  Sum_probs=62.4

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .+..+.+|..-+    .+..+-|+|=|+|.=+|..+...+||.=||.+  ||.+..=.++ ...+....++-+.+.|+|+
T Consensus        32 ~~aa~~~g~tiv----~~~~h~F~p~GvTgv~lLaESHisIHTwPE~g--yaavDiftCg-~~~~p~~a~~~L~~~f~~~  104 (131)
T PRK01236         32 EGAVKYAELTKI----SSHYYQFNPHGATGVVLLAESHISIHTWPEYG--LVTLDVYTCG-DPSKADKAFEYIIKKLKPK  104 (131)
T ss_pred             HHHHHHCCCEEE----EEEEEEcCCCcEEEEEEeeccEEEEEeCccCC--eEEEEEEecC-CCCCHHHHHHHHHHHhCCC
Confidence            355555664422    34678999999999999999999999999965  6666652122 2246889999999999999


Q ss_pred             eEEEEEEEc
Q 019411          291 DFSIAVHAE  299 (341)
Q Consensus       291 ~f~vtlf~~  299 (341)
                      +..++.+..
T Consensus       105 ~~~~~~l~R  113 (131)
T PRK01236        105 RVDHKVLER  113 (131)
T ss_pred             eEEEEEEec
Confidence            999987765

>PRK00458 S-adenosylmethionine decarboxylase proenzyme; Provisional

Probab=91.95  E-value=0.72  Score=40.12  Aligned_cols=82  Identities=12%  Similarity=0.258  Sum_probs=61.6

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCC-CcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCC
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDP-CGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQP  289 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~P-CGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P  289 (341)
                      .+..+..|..-+    .+.-+.|.| =|+|.=+|..+...+||.=||.+  ||.+..=.++ ...+....++.+.+.|+|
T Consensus        42 ~~aa~~~g~til----~~~~h~F~p~~GvT~v~lLaESHisIHTwPE~g--yaavDiftCg-~~~~p~~a~~~L~~~f~~  114 (127)
T PRK00458         42 KEAAKIANMTLL----DIKSWKFGKKGGVSVIALVLESHIAIHTWPEYN--FATVDVYTCG-EHTDPQKAFEYIVSKLKP  114 (127)
T ss_pred             HHHHHHcCCEEE----EEEEEECCCCCCEEEEEEecccEEEEEeCcCCC--cEEEEEEecC-CCCCHHHHHHHHHHHhCC
Confidence            345555564432    346789998 89999999999999999999975  5555542122 223788999999999999


Q ss_pred             ceEEEEEEEc
Q 019411          290 RDFSIAVHAE  299 (341)
Q Consensus       290 ~~f~vtlf~~  299 (341)
                      ++..++.+..
T Consensus       115 ~~~~~~~~~R  124 (127)
T PRK00458        115 KRYTVNYADR  124 (127)
T ss_pred             CEEEEEEEec
Confidence            9999997764

>COG1586 SpeD S-adenosylmethionine decarboxylase [Amino acid transport and metabolism]

Probab=89.98  E-value=0.74  Score=40.76  Aligned_cols=69  Identities=20%  Similarity=0.339  Sum_probs=57.8

Q ss_pred             cccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCC-CCHHHHHHHHhhccCCceEEEEEEEc
Q 019411          227 KICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPND-VNLNQLVERVLACFQPRDFSIAVHAE  299 (341)
Q Consensus       227 ~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~-~~~~~li~~VL~~F~P~~f~vtlf~~  299 (341)
                      .+.-+-|.|=|=|-=.|..+..-|||.=||-+  ||..+.-  .... .+...-++-+++-|+|.++++-....
T Consensus        53 ~~~~~~f~p~GvSgvvliaESHitiHTwPEyg--~A~iDVy--TCG~~~~p~~A~~yi~~~L~p~~v~v~~~~R  122 (136)
T COG1586          53 NIAFHKFSPQGVSGVVLIAESHITIHTWPEYG--YATIDVY--TCGDHIDPLKAFNYLVEQLKPKRVTVDYRDR  122 (136)
T ss_pred             EEEeEEecCCCeEEEEEEEeeeeeEecCCccC--ceEEEEE--ccCCCCCHHHHHHHHHHHhCCcEEEEEEEec
Confidence            36788999999999999999999999999999  8888872  2222 57788899999999999999875554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	341
1mhm_A	288	Crystal Structure Of S-Adenosylmethionine Decarboxy		3e-95
1msv_A	354	The S68a S-adenosylmethionine Decarboxylase Proenzy		2e-37
1jl0_A	334	Structure Of A Human S-Adenosylmethionine Decarboxy		3e-36
3h0v_A	266	Human Adometdc With 5'-Deoxy-5'-(Dimethylsulfonio)		2e-26
3dz2_A	267	Human Adometdc With 5'-[(3-Aminopropyl)methylamino]		2e-26
1jen_A	267	Human S-Adenosylmethionine Decarboxylase Length = 2		3e-26
3ep3_A	260	Human Adometdc D174n Mutant With No Putrescine Boun		3e-26
3ep9_A	260	Human Adometdc With No Putrescine Bound Length = 26		3e-26
1mhm_B	72	Crystal Structure Of S-Adenosylmethionine Decarboxy		5e-26
3ep5_A	260	Human Adometdc E178q Mutant With No Putrescine Boun		6e-26
3ep4_A	260	Human Adometdc E256q Mutant With No Putrescine Boun		6e-26
1i72_A	267	Human S-Adenosylmethionine Decarboxylase With Coval		7e-26
3dz3_A	267	Human Adometdc F223a Mutant With Covalently Bound S		2e-25
1i7m_A	267	Human S-Adenosylmethionine Decarboxylase With Coval		5e-24

>pdb|1MHM|A Chain A, Crystal Structure Of S-Adenosylmethionine Decarboxylase From Potato Length = 288

Iteration: 1
 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/278 (60%), Positives = 201/278 (72%), Gaps = 23/278 (8%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLSLNVRSVRYTRGSFIFPGNQLYPHRNF 136
           SLFVYSYKIIIKTCG              AETLSL V+ VRYTRGSFIFPG Q +PHR+F
Sbjct: 2   SLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHF 61
Query: 137 SEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDR 196
           SEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA  + S+DPV+T+EMC+TGLDR
Sbjct: 62  SEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDR 121
Query: 197 EMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPE 256
           E ASVFYKT+  SA  MTV SGIRKILP S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPE
Sbjct: 122 EKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPE 181
Query: 257 DGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKC------- 309
           DGF+YASFE+VGY+P  + L  LVERVLACF+P +FS+A+HA+VA K++E+ C       
Sbjct: 182 DGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGY 241
Query: 310 ----------------LLNKFVKTEGNGSPRSTLKCYW 331
                           +  KF +T    SP+S LK  W
Sbjct: 242 SLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 279

>pdb|1MSV|A Chain A, The S68a S-adenosylmethionine Decarboxylase Proenzyme Processing Mutant. Length = 354

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 152/293 (51%), Gaps = 12/293 (4%)
Query: 15  FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
           FEG EK LE+ F       +     LR + +++ D +L   +C+I+S    D+ ++YVLS
Sbjct: 7   FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLS 66
Query: 75  ESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYP 132
           E+S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YP
Sbjct: 67  EASMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYP 126
Query: 133 HRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCL 191
           HRNF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ +
Sbjct: 127 HRNFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILM 181
Query: 192 TGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAIST 250
           + LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T
Sbjct: 182 SELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWT 241
Query: 251 VHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +H+TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 242 IHITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 291

>pdb|1JL0|A Chain A, Structure Of A Human S-Adenosylmethionine Decarboxylase Self-Processing Ester Intermediate And Mechanism Of Putrescine Stimulation Of Processing As Revealed By The H243a Mutant Length = 334

Iteration: 1
 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 12/293 (4%)
Query: 15  FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
           FEG EK LE+ F       +     LR + +++ D +L   +C+I+S    D+ ++YVLS
Sbjct: 7   FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLS 66
Query: 75  ESSLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYP 132
           ESS+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YP
Sbjct: 67  ESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYP 126
Query: 133 HRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCL 191
           HRNF EE+  L++ F      + A    G      W++Y+    E  + S P  T+E+ +
Sbjct: 127 HRNFQEEIEFLNAIF-----PNGAGYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEILM 181
Query: 192 TGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAIST 250
           + LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T
Sbjct: 182 SELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWT 241
Query: 251 VHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           + +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 242 IAITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 291

>pdb|3H0V|A Chain A, Human Adometdc With 5'-Deoxy-5'-(Dimethylsulfonio) Adenosine Length = 266

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 1   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 60
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 61  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 115
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 116 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 175
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 176 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 223

>pdb|3DZ2|A Chain A, Human Adometdc With 5'-[(3-Aminopropyl)methylamino]-5'deoxy- 8-Methyladenosine Length = 267

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 2   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 61
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 62  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 116
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 117 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 176
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 177 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 224

>pdb|1JEN|A Chain A, Human S-Adenosylmethionine Decarboxylase Length = 267

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 2   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 61
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 62  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 116
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 117 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 176
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 177 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 224

>pdb|3EP3|A Chain A, Human Adometdc D174n Mutant With No Putrescine Bound Length = 260

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 1   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 60
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 61  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPNQTLEILMSE 115
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 116 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 175
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 176 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 223

>pdb|3EP9|A Chain A, Human Adometdc With No Putrescine Bound Length = 260

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 1   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 60
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 61  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 115
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 116 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 175
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 176 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 223

>pdb|1MHM|B Chain B, Crystal Structure Of S-Adenosylmethionine Decarboxylase From Potato Length = 72

Iteration: 1
 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 61/71 (85%)
Query: 5  DTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLS 64
          +  + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LS
Sbjct: 2  EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLS 61
Query: 65 NDEVDSYVLSE 75
          ND VDSYVLSE
Sbjct: 62 NDYVDSYVLSE 72

>pdb|3EP5|A Chain A, Human Adometdc E178q Mutant With No Putrescine Bound Length = 260

Iteration: 1
 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 1   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 60
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+++ ++ 
Sbjct: 61  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLQILMSE 115
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 116 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 175
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 176 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 223

>pdb|3EP4|A Chain A, Human Adometdc E256q Mutant With No Putrescine Bound Length = 260

Iteration: 1
 Score =  114 bits (286), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 1   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 60
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 61  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 115
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 116 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 175
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SF+T   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 176 ITPEPEFSYVSFQT---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 223

>pdb|1I72|A Chain A, Human S-Adenosylmethionine Decarboxylase With Covalently Bound Pyruvoyl Group And Covalently Bound 5'-Deoxy-5'-[n-Methyl-N-(2- Aminooxyethyl) Amino]adenosine Length = 267

Iteration: 1
 Score =  114 bits (285), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 2   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 61
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F      + A    G      W++Y+    E  + S P  T+E+ ++ 
Sbjct: 62  NFQEEIEFLNAIFP-----NGAGYCMGRMNSDCWYLYTLDFPESRVISQPDQTLEILMSE 116
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T+H
Sbjct: 117 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWTIH 176
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 177 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 224

>pdb|3DZ3|A Chain A, Human Adometdc F223a Mutant With Covalently Bound S- Adenosylmethionine Methyl Ester Length = 267

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S+FV   + I+KTCG              A   S   +++S  Y+R +F+ P +Q YPHR
Sbjct: 2   SMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHR 61
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F        AY +G       W++Y+    E  + S P  T+E+ ++ 
Sbjct: 62  NFQEEIEFLNAIF----PNGAAYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILMSE 116
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I     +PCGYSMN ++      T+H
Sbjct: 117 LDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMANPCGYSMNGMKSDGTYWTIH 176
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 177 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 224

>pdb|1I7M|A Chain A, Human S-Adenosylmethionine Decarboxylase With Covalently Bound Pyruvoyl Group And Complexed With 4-Amidinoindan-1-One-2'- Amidinohydrazone Length = 267

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 77  SLFVYSYKIIIKTCGXXXXXXXXXXXXXXAETLS--LNVRSVRYTRGSFIFPGNQLYPHR 134
           S FV   + I+KTCG              A   S   +++S  Y+R +F  P +Q YPHR
Sbjct: 2   SXFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFXKPSHQGYPHR 61
Query: 135 NFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTIEMCLTG 193
           NF EE+  L++ F      + A    G      W++Y+    E  + S P  T+E+  + 
Sbjct: 62  NFQEEIEFLNAIFP-----NGAGYCXGRXNSDCWYLYTLDFPESRVISQPDQTLEILXSE 116
Query: 194 LDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAISTVH 252
           LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYS N  +      T+H
Sbjct: 117 LDPAVXDQFYXKDGVTAKDVTRESGIRDLIPGSVIDATXFNPCGYSXNGXKSDGTYWTIH 176
Query: 253 VTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 177 ITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 224

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	341
1mhm_A	288	Adometdc, samdc, S-adenosylmethionine decarboxylas	1e-120
1jl0_A	334	Adometdc, S-adenosylmethionine decarboxylase proen	1e-119
1mhm_B	72	Adometdc, samdc, S-adenosylmethionine decarboxylas	4e-32
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06

>1mhm_A Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1 Length = 288

 Score =  348 bits (893), Expect = e-120
 Identities = 185/287 (64%), Positives = 223/287 (77%), Gaps = 23/287 (8%)

Query: 77  SLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNF 136
           SLFVYSYKIIIKTCGTTKLLL+IPPIL+LAETLSL V+ VRYTRGSFIFPG Q +PHR+F
Sbjct: 2   SLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHF 61

Query: 137 SEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDR 196
           SEEVAVLD YFGKL +GS A I+G   K QKWHVYSASA  + S+DPV+T+EMC+TGLDR
Sbjct: 62  SEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDR 121

Query: 197 EMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPE 256
           E ASVFYKT+  SA  MTV SGIRKILP S+ICDFEF+PCGYSMNS+EGAA+ST+H+TPE
Sbjct: 122 EKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPE 181

Query: 257 DGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLN---- 312
           DGF+YASFE+VGY+P  + L  LVERVLACF+P +FS+A+HA+VA K++E+ C ++    
Sbjct: 182 DGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGY 241

Query: 313 -------------------KFVKTEGNGSPRSTLKCYWKEEEEYEED 340
                              KF +T    SP+S LK  WKEEE+  ++
Sbjct: 242 SLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE 288

>1jl0_A Adometdc, S-adenosylmethionine decarboxylase proenzyme; spermidine biosynthesis, lyase, pyruvate, sandwich, allosteric enzyme, pyruvoyl; 1.50A {Homo sapiens} SCOP: d.156.1.1 PDB: 1msv_A 1i7b_A* 1i79_A* 1i72_A* 1i7c_A* 1i7m_A* 3dz6_A* 3dz2_A* 3dz5_A* 3dz4_A* 3dz7_A* 3h0w_A* 3h0v_A* 1jen_A 3dz3_A* 3ep9_A 3ep6_A* 3ep3_A* 3ep8_A* 3ep5_A* ... Length = 334

 Score =  346 bits (889), Expect = e-119
 Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 12/308 (3%)

Query: 11  SAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDS 70
           +A  FEG EK LE+ F       +     LR + +++ D +L   +C+I+S    D+ ++
Sbjct: 3   AAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEA 62

Query: 71  YVLSESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLS--LNVRSVRYTRGSFIFPGN 128
           YVLSESS+FV   + I+KTCGTT LL ++ P+LKLA   S   +++S  Y+R +F+ P +
Sbjct: 63  YVLSESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSH 122

Query: 129 QLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSAS-AEPLISSDPVFTI 187
           Q YPHRNF EE+  L++ F         Y +G       W++Y+    E  + S P  T+
Sbjct: 123 QGYPHRNFQEEIEFLNAIFP----NGAGYCMGRMNS-DCWYLYTLDFPESRVISQPDQTL 177

Query: 188 EMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-A 246
           E+ ++ LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++   
Sbjct: 178 EILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDG 237

Query: 247 AISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIE 306
              T+ +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K   
Sbjct: 238 TYWTIAITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRT 294

Query: 307 QKCLLNKF 314
                 K 
Sbjct: 295 VLASPQKI 302

>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1 Length = 72

 Score =  114 bits (286), Expect = 4e-32
 Identities = 55/71 (77%), Positives = 61/71 (85%)

Query: 5  DTTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLS 64
          +  + VSAIGFEG+EKRLEISF EP +F DP GKGLR L+KAQLDEILGPAECTIV +LS
Sbjct: 2  EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLS 61

Query: 65 NDEVDSYVLSE 75
          ND VDSYVLSE
Sbjct: 62 NDYVDSYVLSE 72

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 2e-06
 Identities = 60/423 (14%), Positives = 125/423 (29%), Gaps = 133/423 (31%)

Query: 17  GYEKRLEISFFEPSMFVDPEGKG----LRR-LTKAQLDEILGPAECTIVSSLSNDEVDSY 71
            Y+  L +  FE +   + + K      +  L+K ++D I+            +    + 
Sbjct: 17  QYKDILSV--FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM---------SKDAVSGTL 65

Query: 72  VLSESSLFVYSYKIIIKTCGTT-----KLLLSIPPILKLAETLSLNVRSVRYTRGSFIFP 126
            L   +L     +++ K          K L+S  PI       S+  R     R   ++ 
Sbjct: 66  RLFW-TLLSKQEEMVQKFVEEVLRINYKFLMS--PIKTEQRQPSMMTRMYIEQR-DRLYN 121

Query: 127 GNQLYPHRNFS--EEVAVLDSYFGKLVSGSNAYIIG--GSGKPQKWHVYSA-SAEPLIS- 180
            NQ++   N S  +    L     +L    N  I G  GSGK   W       +  +   
Sbjct: 122 DNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK--TWVALDVCLSYKVQCK 179

Query: 181 -SDPVF------------TIEMCLTGLDREMASVFYKTQSGSAGA-MTVNSGIRK----- 221
               +F             +EM L  L  ++   +      S+   + ++S   +     
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 222 ----------ILPDSKICDFE----FDP-C------GYSMNSVEGAAISTVHVTPED--- 257
                     +L +  + + +    F+  C       +   +   +A +T H++ +    
Sbjct: 239 KSKPYENCLLVLLN--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 258 GFS-------YASF----------ETVGYDP--------------------NDVNLNQL- 279
             +          +          E +  +P                      VN ++L 
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 280 --VERVLACFQPRDFSIAVHAEVAGKMIEQKCLLNKFVKTEGNGSPRSTLKCYWKEEEEY 337
             +E  L   +P ++          KM ++  +            P   L   W +  + 
Sbjct: 357 TIIESSLNVLEPAEYR---------KMFDRLSVFPPSAHI-----PTILLSLIWFDVIKS 402

Query: 338 EED 340
           +  
Sbjct: 403 DVM 405

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	341
1jl0_A	334	Adometdc, S-adenosylmethionine decarboxylase proen	100.0
1mhm_A	288	Adometdc, samdc, S-adenosylmethionine decarboxylas	100.0
1mhm_B	72	Adometdc, samdc, S-adenosylmethionine decarboxylas	99.96
1vr7_A	142	Adometdc, samdc, S-adenosylmethionine decarboxylas	95.34
2iii_A	135	S-adenosylmethionine decarboxylase proenzyme; two-	94.83

>1jl0_A Adometdc, S-adenosylmethionine decarboxylase proenzyme; spermidine biosynthesis, lyase, pyruvate, sandwich, allosteric enzyme, pyruvoyl; 1.50A {Homo sapiens} SCOP: d.156.1.1 PDB: 1msv_A 1i7b_A* 1i79_A* 1i72_A* 1i7c_A* 1i7m_A* 3dz6_A* 3dz2_A* 3dz5_A* 3dz4_A* 3dz7_A* 3h0w_A* 3h0v_A* 1jen_A 3dz3_A* 3ep9_A 3ep6_A* 3ep3_A* 3ep8_A* 3ep5_A* ...

Probab=100.00  E-value=3.8e-118  Score=865.23  Aligned_cols=290  Identities=35%  Similarity=0.594  Sum_probs=261.9

Q ss_pred             cCCCCCCCcceEEEEEecCCCCcCCC-CcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEe
Q 019411           10 VSAIGFEGYEKRLEISFFEPSMFVDP-EGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIK   88 (341)
Q Consensus        10 ~s~~~FEG~EKrLEI~F~~~~~~~~~-~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILK   88 (341)
                      +++++|||+||||||||.++.. ..+ +..|||+|||++|++||+.|+|+|||+++|+++||||||||||||||+|||||
T Consensus         2 ds~~~FEG~EKrLEI~F~~~~~-~~~~~~~~LR~i~~~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiIlK   80 (334)
T 1jl0_A            2 EAAHFFEGTEKLLEVWFSRQQP-DANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILK   80 (334)
T ss_dssp             ---CCCCCCCEEEEEEEECCC------CCSCGGGSCHHHHHHHHHTTTCCEEEEEECSSEEEEEECCCCEEEESSEEEEE
T ss_pred             CcCCCCcccceEEEEEEecCCc-cccCCCCccccCCHHHHHHHHHhcCCEEEEeecccccceEEeccceeeEECCEEEEE
Confidence            6899999999999999997531 122 34569999999999999999999999999999999999999999999999999


Q ss_pred             ccCchhhhcchHHHHHHHHHh-Cc-eeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCC
Q 019411           89 TCGTTKLLLSIPPILKLAETL-SL-NVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQ  166 (341)
Q Consensus        89 TCGTTtLL~al~~ll~la~~~-~~-~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~  166 (341)
                      ||||||||+|||+||++|+++ |+ .|++|+||||||+||+.|++||++|+|||++|+++|+    +|+||+||++|+ |
T Consensus        81 TCGTT~LL~~l~~ll~la~~~~g~~~v~~v~YsRknf~fP~~Q~~pH~sf~eEv~~L~~~F~----~G~aY~~G~~~~-~  155 (334)
T 1jl0_A           81 TCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFP----NGAGYCMGRMNS-D  155 (334)
T ss_dssp             ECTTCCGGGGHHHHHHHHHHHHCCCEEEEEEEEEECCSSGGGCCTTCSSHHHHHHHHHTTCS----SEEEEEESCTTS-S
T ss_pred             eCCCCcHHHHHHHHHHHHHHhcCccceeEEEEcccCCCCcccCCCccCCHHHHHHHHHHhcC----CCcEEEeCCCCC-C
Confidence            999999999999999999765 88 7999999999999999999999999999999999998    699999999996 7


Q ss_pred             cEEEEecCCCCC-CCCCCceeEEEeecCCCHhhhhccccCCCCcHHHHHHHhCCcccCCCCcccccCCCCCcccccccCC
Q 019411          167 KWHVYSASAEPL-ISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG  245 (341)
Q Consensus       167 ~W~lY~~~~~~~-~~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~~~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~  245 (341)
                      |||||+++.+.. ...++|+|||||||+||+++|++||++..++|++||+.+||++|+|+++||||+|+|||||||||.+
T Consensus       156 hw~ly~~~~~~~~~~~~~d~TlEilMt~Ld~~~a~~F~~~~~~~a~~~t~~sgi~~i~P~~~iddf~F~PCGYSmNgi~~  235 (334)
T 1jl0_A          156 CWYLYTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKS  235 (334)
T ss_dssp             CEEEEEECCC---CCCSCCEEEEEEEESCCHHHHGGGBCBTTBCHHHHHHHTTCTTSSSSCEEEEEECSSBCEEEEEECT
T ss_pred             eeEEEecCCcccccCCCCcceEEEEccCCCHHHHhhhhcCcCCcHHHHHHHhChhhcCCCcEeeccccCCccceeccccC
Confidence            999999976642 2457899999999999999999999999999999999999999999999999999999999999995


Q ss_pred             -CceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccccchhhhh
Q 019411          246 -AAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQK  308 (341)
Q Consensus       246 -~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~~~~~~~~  308 (341)
                       ++|+|||||||++|||||||||   +...++.+||+|||++|+|++|+||+|++..++.....
T Consensus       236 ~~~Y~TIHVTPE~~~SYaSFETN---~~~~~~~~lv~~Vl~~F~P~~fsvt~f~~~~~~~~~~~  296 (334)
T 1jl0_A          236 DGTYWTIAITPEPEFSYVSFETN---LSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVL  296 (334)
T ss_dssp             TSCEEEEEEECCTTSCEEEEEEC---CCCSCSHHHHHHHHHHHCCSEEEEEEEEETTCCC----
T ss_pred             CCeEEEEEecCCCCCeeEEEEcC---cccccHHHHHHHHHheeCCCeEEEEEEcCCccccchhh
Confidence             5999999999999999999995   55668899999999999999999999999877654433

>1mhm_A Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1

Probab=100.00  E-value=6.4e-104  Score=752.94  Aligned_cols=265  Identities=70%  Similarity=1.171  Sum_probs=214.5

Q ss_pred             ceEEEecceEEEeccCchhhhcchHHHHHHHHHhCceeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCce
Q 019411           76 SSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLSLNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSN  155 (341)
Q Consensus        76 SSLFV~~~kiILKTCGTTtLL~al~~ll~la~~~~~~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~  155 (341)
                      |||||||+|||||||||||||+|||+||++|+++|++|++|+||||||+||++|++||++|+|||++|+++|++|+++|+
T Consensus         1 SSLFV~~~kiIlKTCGTT~LL~~l~~ll~la~~~g~~v~~v~YsRknf~fP~~Q~~pH~sf~eEV~~L~~~F~~~~~~G~   80 (288)
T 1mhm_A            1 XSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSK   80 (288)
T ss_dssp             -CEEEETTEEEEEEETTSCGGGGHHHHHHHHHHTTCCEEEEEEEECC-----------CCHHHHHHHHHHHHTTSTTCEE
T ss_pred             CCccccCCEEEEEeCCCccHHHHHHHHHHHHHHcCCceEEEEEecccCCCcccCCCCcCCHHHHHHHHHHHhcccCCCce
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999998888999


Q ss_pred             eEEecCCCCCCcEEEEecCCCCCCCCCCceeEEEeecCCCHhhhhccccCCCCcHHHHHHHhCCcccCCCCcccccCCCC
Q 019411          156 AYIIGGSGKPQKWHVYSASAEPLISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDP  235 (341)
Q Consensus       156 aY~~G~~~~~~~W~lY~~~~~~~~~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~~~~~t~~sGI~~l~P~~~id~~~F~P  235 (341)
                      ||+||++|++||||||+++.......++|+|||||||+||+++|++||++++++|++||+.+||++|+|+++||||+|+|
T Consensus        81 aY~~G~~~~~~~W~lY~~~~~~~~~~~~d~TlEilMt~Ld~~~a~~F~~~~~~sa~~~t~~sGi~~i~P~~~iddf~F~P  160 (288)
T 1mhm_A           81 AVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEP  160 (288)
T ss_dssp             EEEESSSCSSCCEEEEEEESCCCCCSSCCCEEEEEEEEECHHHHHTTSCCSSCCHHHHHHHHTGGGTSTTSEEEEEECSS
T ss_pred             eEEeCCCCCCCceEEEeCCCCcccCCCCcceEEEeecCCCHHHHHhhhccccccHHHHHHHhChhhcCCCcEeeccccCC
Confidence            99999999999999999986543445789999999999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccccchhhhhcccc---
Q 019411          236 CGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQKCLLN---  312 (341)
Q Consensus       236 CGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~~~~~~~~~~~~---  312 (341)
                      ||||||||.|++|+|||||||++|||||||||++|.+..++.+||+|||++|+|++|+||+|++.+++.......++   
T Consensus       161 CGYSmNgi~g~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~lv~~Vl~~F~P~~fsvt~~~~~~~~~~~~~~~~~~~g  240 (288)
T 1mhm_A          161 CGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKG  240 (288)
T ss_dssp             SCEEEEEEETTEEEEEEEECCTTSCEEEEEEESCCTTTSCHHHHHHHHHHHHCEEEEEEEEEESSCHHHHHHHHCCCCTT
T ss_pred             ccceeccccCCceEEEEeCCCCCCeeEEEEecCCCcccccHHHHHHHHHheeCCCEEEEEEEecccchhhhhhccCCcCC
Confidence            99999999999999999999999999999999988887899999999999999999999999997666544322222   


Q ss_pred             --------------------ceecccCCCCCCccccccccchhhhccc
Q 019411          313 --------------------KFVKTEGNGSPRSTLKCYWKEEEEYEED  340 (341)
Q Consensus       313 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (341)
                                          +|.+...+|||||+|+|||+++++|++|
T Consensus       241 y~~~~~~~~~l~~gy~l~y~~f~~~~~~~~p~~~~~~~~~~~~~~~~~  288 (288)
T 1mhm_A          241 YSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE  288 (288)
T ss_dssp             EEEEEEEEEECGGGCEEEEEEEEEC-----------------------
T ss_pred             CeEcccEEEECCCCcEEEEEEEeccCCCCCCcchhhhhhcccccccCC
Confidence                                7777778999999999889999988876

>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1

Probab=99.96  E-value=1.3e-29  Score=197.09  Aligned_cols=70  Identities=79%  Similarity=1.216  Sum_probs=51.6

Q ss_pred             cccccCCCCCCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecC
Q 019411            6 TTMAVSAIGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSE   75 (341)
Q Consensus         6 ~~~~~s~~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSE   75 (341)
                      ++++.++.+|||+||||||||.+++.+.++++.|||+|||++|++||+.|+|+|||+++|+++|||||||
T Consensus         3 ~~~~~s~~~FEG~EK~LEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSE   72 (72)
T 1mhm_B            3 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSE   72 (72)
T ss_dssp             ------------CEEEEEEEECCCCCC----CCCGGGCCHHHHHHHHHHHTCEEEEEEECSSCEEEEEEC
T ss_pred             cccCCCCCCcccceEEEEEEEecCCccCCCCcCccccCCHHHHHHHHhhcCCEEEEEecCCcceeEEecC
Confidence            5678899999999999999999776555677899999999999999999999999999999999999998

>1vr7_A Adometdc, samdc, S-adenosylmethionine decarboxylase proenzyme; TM0655, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.20A {Thermotoga maritima} SCOP: d.156.1.2 PDB: 1tlu_A 1tmi_A 3iwc_A* 3iwb_A* 3iwd_A* 3iwc_B* 3iwb_B* 3iwd_B*

Probab=95.34  E-value=0.018  Score=49.65  Aligned_cols=104  Identities=20%  Similarity=0.231  Sum_probs=73.5

Q ss_pred             EEEeecCCCHhhhhccccCCC---CcHHHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEE
Q 019411          187 IEMCLTGLDREMASVFYKTQS---GSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYAS  263 (341)
Q Consensus       187 lEIlMt~Ld~~~a~~F~~~~~---~~~~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaS  263 (341)
                      +=+=+|+-+++...    +..   ..-.+..+..|..-+    .+.-+.|+|=|+|.=+|..+...+||.=||.+  ||+
T Consensus        20 li~DlygC~~~~L~----D~e~l~~~l~eAa~~~gatvl----~~~~h~F~P~GvSgvvllaESHIsIHTwPE~g--yAa   89 (142)
T 1vr7_A           20 LVAEFYECDREVLD----NVQLIEQEMKQAAYESGATIV----TSTFHRFLPYGVSGVVVISESHLTIHTWPEYG--YAA   89 (142)
T ss_dssp             EEEEEESCCHHHHT----CHHHHHHHHHHHHHHHTCCEE----EEEEEECSSSCEEEEEEETTEEEEEEEEGGGT--EEE
T ss_pred             EEEEEcCCChHHCC----CHHHHHHHHHHHHHHcCCEEe----EEEEEEcCCCCeEEEEEecccEEEEEeCCCCC--eEE
Confidence            33445677766533    221   223455555665543    34568899999999999999999999999999  566


Q ss_pred             EeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccc
Q 019411          264 FETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVA  301 (341)
Q Consensus       264 FETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~  301 (341)
                      ...=-++ ...+....++-+.+.|+|++..++.+....
T Consensus        90 vDVftCg-~~~~P~~a~~~L~~~f~a~~~~~~~~~RG~  126 (142)
T 1vr7_A           90 IDLFTCG-EDVDPWKAFEHLKKALKAKRVHVVEHERGR  126 (142)
T ss_dssp             EEEEEES-TTCCHHHHHHHHHHHHTCSEEEEEEEEEEE
T ss_pred             EEEEccC-CCCCHHHHHHHHHHHhCCCeEEEEEEeCCC
Confidence            6652112 224788999999999999999998777643

>2iii_A S-adenosylmethionine decarboxylase proenzyme; two-layer alpha beta-sandwich, structural genomics, NPPSFA; 2.30A {Aquifex aeolicus}

Probab=94.83  E-value=0.016  Score=49.49  Aligned_cols=82  Identities=17%  Similarity=0.292  Sum_probs=61.8

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCC-CCHHHHHHHHhhccCC
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPND-VNLNQLVERVLACFQP  289 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~-~~~~~li~~VL~~F~P  289 (341)
                      .+..+..|..-+=    +.-+.|+|=|+|.=+|..+...+||.=||.+  ||+...=  .... .+....++-+.+.|+|
T Consensus        32 ~~aa~~~gatvl~----~~~h~F~P~GvSgvvllaESHisIHTwPE~g--yaavDvf--tCg~~~~P~~a~~~l~~~f~a  103 (135)
T 2iii_A           32 EGAVKYANLTKIS----SHYYQFQPHGATGVVLLAESHISIHTWPEHG--LATVDVY--TCGDPSKAYRAMDYIITQLNP  103 (135)
T ss_dssp             HHHHHHTTCCEEE----EEEEECSSSCEEEEEEEC-CEEEEEEEGGGT--EEEEEEE--EESCHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCEEEE----EEEEEcCCCCeEEEEEecccEEEEEeCCCCC--cEEEEEE--ccCCCCCHHHHHHHHHHHhCC
Confidence            3555555554432    4568899999999999999999999999999  5666651  1122 3688899999999999


Q ss_pred             ceEEEEEEEcc
Q 019411          290 RDFSIAVHAEV  300 (341)
Q Consensus       290 ~~f~vtlf~~~  300 (341)
                      ++..++.+...
T Consensus       104 ~~~~~~~~~RG  114 (135)
T 2iii_A          104 KRIDKQVHERG  114 (135)
T ss_dssp             SEEEEEEEEEE
T ss_pred             CeEEEEEEeCC
Confidence            99999977663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	341
g1mhm.1	323	d.156.1.1 (B:,A:) S-adenosylmethionine decarboxyla	1e-143
d1jl0a_	325	d.156.1.1 (A:) S-adenosylmethionine decarboxylase	1e-127

>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine decarboxylase
superfamily: S-adenosylmethionine decarboxylase
family: S-adenosylmethionine decarboxylase
domain: S-adenosylmethionine decarboxylase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  366 bits (940), Expect = e-127
 Identities = 103/293 (35%), Positives = 161/293 (54%), Gaps = 12/293 (4%)

Query: 15  FEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLS 74
           FEG EK LE+ F       +     LR + +++ D +L   +C+I+S    D+ ++YVLS
Sbjct: 3   FEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLS 62

Query: 75  ESSLFVYSYKIIIKTCGTTKLLLSIPPILKLAETLS--LNVRSVRYTRGSFIFPGNQLYP 132
           ESS+FV   + I+KTCGTT LL ++ P+LKLA   S   +++S  Y+R +F+ P +Q YP
Sbjct: 63  ESSMFVSKRRFILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYP 122

Query: 133 HRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHVYSASA-EPLISSDPVFTIEMCL 191
           HRNF EE+  L++ F         Y +G       W++Y+    E  + S P  T+E+ +
Sbjct: 123 HRNFQEEIEFLNAIFP----NGAGYCMGRMNS-DCWYLYTLDFPESRVISQPDQTLEILM 177

Query: 192 TGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEG-AAIST 250
           + LD  +   FY     +A  +T  SGIR ++P S I    F+PCGYSMN ++      T
Sbjct: 178 SELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTYWT 237

Query: 251 VHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGK 303
           + +TPE  FSY SFET   + +  + + L+ +V+  F+P  F   +    + K
Sbjct: 238 IAITPEPEFSYVSFET---NLSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSK 287

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	341
d1jl0a_	325	S-adenosylmethionine decarboxylase {Human (Homo sa	100.0
g1mhm.1	323	S-adenosylmethionine decarboxylase {Potato (Solanu	100.0
d1vr7a1	117	S-adenosylmethionine decarboxylase (SamDC, SpeH) {	96.48

>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine decarboxylase
superfamily: S-adenosylmethionine decarboxylase
family: S-adenosylmethionine decarboxylase
domain: S-adenosylmethionine decarboxylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-117  Score=851.91  Aligned_cols=288  Identities=35%  Similarity=0.593  Sum_probs=264.2

Q ss_pred             CCCCCcceEEEEEecCCCCcCCCCcccccccCHHHHHHHhcccCCeEEeeeecCceeeeeecCceEEEecceEEEeccCc
Q 019411           13 IGFEGYEKRLEISFFEPSMFVDPEGKGLRRLTKAQLDEILGPAECTIVSSLSNDEVDSYVLSESSLFVYSYKIIIKTCGT   92 (341)
Q Consensus        13 ~~FEG~EKrLEI~F~~~~~~~~~~~~gLR~i~r~~w~~~L~~a~C~IlS~~sn~~~DAYvLSESSLFV~~~kiILKTCGT   92 (341)
                      .||||+||||||||.++.....+.+.|||+|||++|++||++|+|+|||+++|+++||||||||||||||||||||||||
T Consensus         1 ~fFEG~EK~LEi~F~~~~~~~~~~~~~LR~i~~~~w~~~L~~a~c~IlS~~sn~~~DAYlLSESSLFV~~~kiiLkTCGT   80 (325)
T d1jl0a_           1 HFFEGTEKLLEVWFSRQQPDANQGSGDLRTIPRSEWDILLKDVQCSIISVTKTDKQEAYVLSESSMFVSKRRFILKTCGT   80 (325)
T ss_dssp             CCCCCCCEEEEEEEECCC-----CCSCGGGSCHHHHHHHHHTTTCCEEEEEECSSEEEEEECCCCEEEESSEEEEEECTT
T ss_pred             CCCCccceEEEEEEccCCCCCCCCCCCcccCCHHHHHHHHHhcCCEEEEeecccccceEEeechhhheeCCeEEEEECCC
Confidence            48999999999999987655566788999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcchHHHHHHHHHhC--ceeeEEEEccccccCCCCCCCCCCChHHHHHHHHHHhcCCCCCceeEEecCCCCCCcEEE
Q 019411           93 TKLLLSIPPILKLAETLS--LNVRSVRYTRGSFIFPGNQLYPHRNFSEEVAVLDSYFGKLVSGSNAYIIGGSGKPQKWHV  170 (341)
Q Consensus        93 TtLL~al~~ll~la~~~~--~~v~~v~YSRknf~fP~~Q~~pH~sf~~Ev~~L~~~F~~l~~~G~aY~~G~~~~~~~W~l  170 (341)
                      ||||+|||+||++|++++  ..|++|+||||||+||++|++||++|+|||++|+++|+    +|+||++|++|+ |||||
T Consensus        81 TtLL~~l~~ll~la~~~~g~~~v~~v~YsRknf~fP~~Q~~pH~sf~~Ev~~L~~~f~----~G~aY~~G~~~~-~hw~l  155 (325)
T d1jl0a_          81 TLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEFLNAIFP----NGAGYCMGRMNS-DCWYL  155 (325)
T ss_dssp             CCGGGGHHHHHHHHHHHHCCCEEEEEEEEEECCSSGGGCCTTCSSHHHHHHHHHTTCS----SEEEEEESCTTS-SCEEE
T ss_pred             ccHHHHHHHHHHHHHHhcCccceeEEEEecccCcCcccCCcccCCHHHHHHHHHHhCC----CCceEEecCCCC-CeEEE
Confidence            999999999999999874  47999999999999999999999999999999999998    799999999996 99999


Q ss_pred             EecCCCCC-CCCCCceeEEEeecCCCHhhhhccccCCCCcHHHHHHHhCCcccCCCCcccccCCCCCcccccccCCC-ce
Q 019411          171 YSASAEPL-ISSDPVFTIEMCLTGLDREMASVFYKTQSGSAGAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGA-AI  248 (341)
Q Consensus       171 Y~~~~~~~-~~~~~D~TlEIlMt~Ld~~~a~~F~~~~~~~~~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~-~Y  248 (341)
                      |+++.+.. ...++|+|||||||+||+++|++||++.+++|.+||+.+||++|+|++.||||+|+|||||||||.++ .|
T Consensus       156 y~~~~~~~~~~~~~d~TlEilMt~Ld~~~a~~f~~~~~~~~~~~t~~~gi~~l~p~~~id~f~F~PCGYS~N~i~~~~~Y  235 (325)
T d1jl0a_         156 YTLDFPESRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVIDATMFNPCGYSMNGMKSDGTY  235 (325)
T ss_dssp             EEECCC---CCCSCCEEEEEEEESCCHHHHGGGBCBTTBCHHHHHHHTTCTTSSSSCEEEEEECSSBCEEEEEECTTSCE
T ss_pred             EecCCcccccCCCCceeeeehhcCCChHHHhhhhccCCCCHHHHHHhcChhhhCCCcEeecccCCCccceeeeecCCCcE
Confidence            99976542 34689999999999999999999999999999999999999999999999999999999999999997 59


Q ss_pred             EEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCceEEEEEEEccccchhhhh
Q 019411          249 STVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPRDFSIAVHAEVAGKMIEQK  308 (341)
Q Consensus       249 ~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~~f~vtlf~~~~~~~~~~~  308 (341)
                      +|||||||++|||||||||   +...+|.++|+|||++|+|++|+||+|++.+.+..+..
T Consensus       236 ~TiHVTPE~~~SYaSFETN---~~~~~~~~li~~vl~~F~P~~f~vt~f~~~~~~~~~~~  292 (325)
T d1jl0a_         236 WTIAITPEPEFSYVSFETN---LSQTSYDDLIRKVVEVFKPGKFVTTLFVNQSSKCRTVL  292 (325)
T ss_dssp             EEEEEECCTTSCEEEEEEC---CCCSCSHHHHHHHHHHHCCSEEEEEEEEETTCCC----
T ss_pred             EEEEECCCCCceeEEEecC---cchhhHHHHHHHHHhhcCCceEEEEEEecCCchhhhhh
Confidence            9999999999999999996   56678999999999999999999999999877665433

>d1vr7a1 d.156.1.2 (A:2-118) S-adenosylmethionine decarboxylase (SamDC, SpeH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine decarboxylase
superfamily: S-adenosylmethionine decarboxylase
family: Bacterial S-adenosylmethionine decarboxylase
domain: S-adenosylmethionine decarboxylase (SamDC, SpeH)
species: Thermotoga maritima [TaxId: 2336]

Probab=96.48  E-value=0.0018  Score=51.68  Aligned_cols=82  Identities=22%  Similarity=0.281  Sum_probs=61.8

Q ss_pred             HHHHHHhCCcccCCCCcccccCCCCCcccccccCCCceEEEEeeCCCCCeeEEEeecCCCCCCCCHHHHHHHHhhccCCc
Q 019411          211 GAMTVNSGIRKILPDSKICDFEFDPCGYSMNSVEGAAISTVHVTPEDGFSYASFETVGYDPNDVNLNQLVERVLACFQPR  290 (341)
Q Consensus       211 ~~~t~~sGI~~l~P~~~id~~~F~PCGYSmNgi~~~~Y~TIHVTPE~~~SYaSFETn~~~~~~~~~~~li~~VL~~F~P~  290 (341)
                      .++.+..|..-|    .+..+.|.|-|+|+-.+..+...+||.=||.+  ||.+..=.++ ...+...+++.+.+.|+|.
T Consensus        30 ~~~~~~~~~tvl----~~~~~~f~p~G~T~~~ll~eSHisiHTwPE~g--~~~iDifsC~-~~~~~~~~~~~l~~~f~~~  102 (117)
T d1vr7a1          30 KQAAYESGATIV----TSTFHRFLPYGVSGVVVISESHLTIHTWPEYG--YAAIDLFTCG-EDVDPWKAFEHLKKALKAK  102 (117)
T ss_dssp             HHHHHHHTCCEE----EEEEEECSSSCEEEEEEETTEEEEEEEEGGGT--EEEEEEEEES-TTCCHHHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCEEE----eEEeEEecCCcEEEEEEecccEEEEEEcCCCc--eEEEEEEeCC-CCCCHHHHHHHHHHHhCCC
Confidence            344555555432    24567899999999999999999999999987  5555541112 2247889999999999999


Q ss_pred             eEEEEEEEc
Q 019411          291 DFSIAVHAE  299 (341)
Q Consensus       291 ~f~vtlf~~  299 (341)
                      +..+..+..
T Consensus       103 ~~~~~~~~R  111 (117)
T d1vr7a1         103 RVHVVEHER  111 (117)
T ss_dssp             EEEEEEEEE
T ss_pred             eEEEEEEeC
Confidence            999987765