Citrus Sinensis ID: 019457

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
MDAASCSGVLSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
cccccccccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHccccccccEEEcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHccccccccHHHHHHHHHHHHHHHHccccccccEEEEEEccc
ccccccccccccccccccccccccccccccccccccccccccccEEcccccEEEEccccccccccccccccccHccccHHcccccccccccccccccccEEEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHccEEEEEEEccccccHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHcccccHHHHHHHHHHHHHHHccccccccEEEEEEEcc
mdaascsgvlsraklpvsnlhKFNQTLGSHIVSVScqsseglnnvnrVSSQALAYTVREsylcgpvqrrnpagiCAAGVATYGENAVEYESHAQAAEDKVGVLLLnlggpdtlhdvqpflfnlfadpdiirlprlFRFLQWPLAKLISvvrapkskegyaaigggsplrkITDEQAQALKTALEaknlpvnvyVGMRYWYPFTEEAVQQIKRDRItrlvvlplypqfsisttgSSIRVLQNIfredaylsrlpvsIIRSWYQREGYVNSMADLIQKELgkfqkpeeVMIFFSAhgvpvsyvekagdpyrDQMEECIYLIMQRLKdrginndhtLAYQVWF
mdaascsgvlsraklpvSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLIsvvrapkskegyaaigggsplrKITDEQAQALKTaleaknlpvnVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLypqfsisttgssIRVLQNIFredaylsrlpVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLkdrginndHTLAYQVWF
MDAASCSGVLSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
****************VSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGG**L**I****AQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVW*
*****************************************************************************************************VLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
*********LSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
********************************SV*C****GLNNVNRVSSQALAYTVRESYLCGPVQRRNPAG*CAAGVATY**************EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDAASCSGVLSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQVWF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query340 2.2.26 [Sep-21-2011]
P42044 514 Ferrochelatase-2, chlorop N/A no 0.985 0.651 0.672 1e-129
Q69TB1 482 Ferrochelatase-1, chlorop yes no 0.852 0.601 0.705 1e-118
P42043 466 Ferrochelatase-1, chlorop yes no 0.779 0.568 0.749 1e-118
P42045 484 Ferrochelatase-2, chlorop N/A no 0.776 0.545 0.740 1e-117
A2Y3Q5 526 Ferrochelatase-2, chlorop N/A no 0.705 0.456 0.733 1e-105
Q0DIV0 526 Ferrochelatase-2, chlorop no no 0.705 0.456 0.733 1e-105
O04921 512 Ferrochelatase-2, chlorop no no 0.776 0.515 0.660 1e-102
B7KGB9 387 Ferrochelatase OS=Cyanoth yes no 0.688 0.604 0.623 2e-81
Q8DGU6 388 Ferrochelatase OS=Thermos yes no 0.688 0.603 0.589 7e-78
B8HK77 387 Ferrochelatase OS=Cyanoth yes no 0.688 0.604 0.585 9e-78
>sp|P42044|HEMH_CUCSA Ferrochelatase-2, chloroplastic OS=Cucumis sativus GN=HEMH PE=2 SV=1 Back     alignment and function desciption
 Score =  461 bits (1187), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/354 (67%), Positives = 273/354 (77%), Gaps = 19/354 (5%)

Query: 1   MDAASCSGVLSRAKLPVS-NLHKFNQTLGSHI------VSVSCQSSEGLNNVNRVSSQAL 53
           MDAAS S  LS  KL  S N    +Q + S        V+ SC++S  L   +R +   +
Sbjct: 1   MDAASSSLALSNIKLHGSTNTLNSDQRISSLCSLPKSRVTFSCKTSGNLQVRDRSTGLVV 60

Query: 54  AYT--------VRESYLCGPVQRRNPAG--ICAAGVATYGENAVEYESHAQAAEDKVGVL 103
           + +        ++  +L GP+++++  G   C+ G  T GE A+E  S +QA +DKVGVL
Sbjct: 61  SCSSSNGDRDVIQGLHLSGPIEKKSRLGQACCSVGTFTVGEFALE--SQSQAVDDKVGVL 118

Query: 104 LLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIG 163
           LLNLGGP+TL DVQPFL+NLFADPDIIRLPRLFRFLQ PLAKLIS  RAPKSKEGYA+IG
Sbjct: 119 LLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQEPLAKLISTYRAPKSKEGYASIG 178

Query: 164 GGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPL 223
           GGSPLRKITDEQAQALK AL  KN+  NVYVGMRYWYPFTEEA+QQIKRD ITRLVVLPL
Sbjct: 179 GGSPLRKITDEQAQALKMALAEKNMSTNVYVGMRYWYPFTEEAIQQIKRDGITRLVVLPL 238

Query: 224 YPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQK 283
           YPQ+SISTTGSSIRVLQ +FREDAYLS LPVSII+SWYQREGY+ SMADL+Q EL  F  
Sbjct: 239 YPQYSISTTGSSIRVLQKMFREDAYLSSLPVSIIKSWYQREGYIKSMADLMQAELKNFAN 298

Query: 284 PEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337
           P+EVMIFFSAHGVPVSYVE AGDPY+DQMEECI LIMQ LK RGI N+HTLAYQ
Sbjct: 299 PQEVMIFFSAHGVPVSYVENAGDPYKDQMEECICLIMQELKARGIGNEHTLAYQ 352
Catalyzes the ferrous insertion into protoporphyrin IX.
Cucumis sativus (taxid: 3659)
EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: .EC: 1
>sp|Q69TB1|HEMH1_ORYSJ Ferrochelatase-1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0297000 PE=2 SV=1 Back     alignment and function description
>sp|P42043|HEMH1_ARATH Ferrochelatase-1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=HEM15 PE=2 SV=1 Back     alignment and function description
>sp|P42045|HEMH_HORVU Ferrochelatase-2, chloroplastic OS=Hordeum vulgare GN=HEMH PE=2 SV=1 Back     alignment and function description
>sp|A2Y3Q5|HEMH_ORYSI Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. indica GN=HEMH PE=2 SV=2 Back     alignment and function description
>sp|Q0DIV0|HEMH2_ORYSJ Ferrochelatase-2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0361200 PE=2 SV=1 Back     alignment and function description
>sp|O04921|HEMH2_ARATH Ferrochelatase-2, chloroplastic OS=Arabidopsis thaliana GN=At2g30390 PE=2 SV=1 Back     alignment and function description
>sp|B7KGB9|HEMH_CYAP7 Ferrochelatase OS=Cyanothece sp. (strain PCC 7424) GN=hemH PE=3 SV=1 Back     alignment and function description
>sp|Q8DGU6|HEMH_THEEB Ferrochelatase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemH PE=3 SV=2 Back     alignment and function description
>sp|B8HK77|HEMH_CYAP4 Ferrochelatase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
225429458 465 PREDICTED: ferrochelatase-2, chloroplast 0.958 0.701 0.707 1e-134
1170239 514 RecName: Full=Ferrochelatase-2, chloropl 0.985 0.651 0.672 1e-127
356506948 481 PREDICTED: ferrochelatase-2, chloroplast 0.879 0.621 0.726 1e-126
356514581 482 PREDICTED: ferrochelatase-2, chloroplast 0.867 0.612 0.732 1e-125
147818793 445 hypothetical protein VITISV_021593 [Viti 0.758 0.579 0.834 1e-125
255640257 459 unknown [Glycine max] 0.879 0.651 0.723 1e-125
255550838 480 ferrochelatase, putative [Ricinus commun 0.817 0.579 0.764 1e-124
328727190 487 ferrochelatase isoform I [Nicotiana taba 0.885 0.618 0.707 1e-124
224092212412 predicted protein [Populus trichocarpa] 0.788 0.650 0.781 1e-122
115478416 482 Os09g0297000 [Oryza sativa Japonica Grou 0.852 0.601 0.705 1e-116
>gi|225429458|ref|XP_002277290.1| PREDICTED: ferrochelatase-2, chloroplastic [Vitis vinifera] gi|296081616|emb|CBI20621.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/339 (70%), Positives = 275/339 (81%), Gaps = 13/339 (3%)

Query: 1   MDAASCSGVLSRAKLPVSNLHKFNQTLGSHIVSVSCQSSEGLNNVNRVSSQALAYTVRES 60
           M+A S S +L   K+   N   FNQ       S+SC  +    + +  SS+ L    + S
Sbjct: 1   MEAVSTSSILPHGKVSGLNHRSFNQK-----SSMSCPQTRSFKSAHCYSSEGL----KGS 51

Query: 61  YLCGPVQRRNPAG--ICAAGVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQP 118
            L   +++RNP G    +AG  TY  +AVE  +HA   E+KVGVLLLNLGGP+TLHDVQP
Sbjct: 52  QLLNSIEKRNPVGQTFSSAGAYTYVGSAVESPTHA--VEEKVGVLLLNLGGPETLHDVQP 109

Query: 119 FLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQA 178
           FLFNLFADPDIIRLPRLF+FLQ PLA+LISV+RAPKSKEGYAAIGGGSPLRKITDEQA A
Sbjct: 110 FLFNLFADPDIIRLPRLFQFLQRPLAQLISVIRAPKSKEGYAAIGGGSPLRKITDEQAHA 169

Query: 179 LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRV 238
           +K ALEAKN+ VNVYVGMRYWYPFTEEA++QIK+D+ITRLVVLPLYPQFSISTTGSSIRV
Sbjct: 170 IKAALEAKNMHVNVYVGMRYWYPFTEEAIEQIKKDKITRLVVLPLYPQFSISTTGSSIRV 229

Query: 239 LQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPV 298
           L++IFREDAYLSRLPVSII+ WYQR+GY+NSMADLI++EL  F KP+EVMIFFSAHGVPV
Sbjct: 230 LESIFREDAYLSRLPVSIIQCWYQRQGYINSMADLIEEELQIFSKPKEVMIFFSAHGVPV 289

Query: 299 SYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHTLAYQ 337
           SYVE AGDPYRDQMEECIYLIMQ LK RGI+N HTLAYQ
Sbjct: 290 SYVEDAGDPYRDQMEECIYLIMQELKARGISNKHTLAYQ 328

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|1170239|sp|P42044.1|HEMH_CUCSA RecName: Full=Ferrochelatase-2, chloroplastic; AltName: Full=Ferrochelatase II; AltName: Full=Heme synthase 2; AltName: Full=Protoheme ferro-lyase 2; Flags: Precursor gi|474968|dbj|BAA05102.1| ferrochelatase [Cucumis sativus] Back     alignment and taxonomy information
>gi|356506948|ref|XP_003522235.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356514581|ref|XP_003525984.1| PREDICTED: ferrochelatase-2, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|147818793|emb|CAN67281.1| hypothetical protein VITISV_021593 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255640257|gb|ACU20419.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|255550838|ref|XP_002516467.1| ferrochelatase, putative [Ricinus communis] gi|223544287|gb|EEF45808.1| ferrochelatase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|328727190|gb|AEB38782.1| ferrochelatase isoform I [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224092212|ref|XP_002309511.1| predicted protein [Populus trichocarpa] gi|222855487|gb|EEE93034.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115478416|ref|NP_001062803.1| Os09g0297000 [Oryza sativa Japonica Group] gi|75322957|sp|Q69TB1.1|HEMH1_ORYSJ RecName: Full=Ferrochelatase-1, chloroplastic; AltName: Full=Ferrochelatase I; AltName: Full=Heme synthase 1; AltName: Full=Protoheme ferro-lyase 1; Flags: Precursor gi|50725080|dbj|BAD33213.1| putative ferrochelatase [Oryza sativa Japonica Group] gi|113631036|dbj|BAF24717.1| Os09g0297000 [Oryza sativa Japonica Group] gi|215686920|dbj|BAG90790.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query340
TAIR|locus:2180642 466 FC1 "ferrochelatase 1" [Arabid 0.761 0.555 0.769 2.2e-105
TIGR_CMR|GSU_3312317 GSU_3312 "ferrochelatase" [Geo 0.670 0.719 0.395 7.5e-41
RGD|1307556 388 Fech "ferrochelatase" [Rattus 0.691 0.605 0.381 2.3e-39
UNIPROTKB|P22600 416 FECH "Ferrochelatase, mitochon 0.785 0.641 0.363 2.9e-39
UNIPROTKB|P22830 423 FECH "Ferrochelatase, mitochon 0.75 0.602 0.361 6.1e-39
MGI|MGI:95513 420 Fech "ferrochelatase" [Mus mus 0.864 0.7 0.323 7.8e-39
UNIPROTKB|E1C7D2 413 FECH "Ferrochelatase, mitochon 0.702 0.578 0.359 2.6e-38
UNIPROTKB|F1NBT4 402 FECH "Ferrochelatase, mitochon 0.702 0.594 0.359 2.6e-38
UNIPROTKB|O42479 402 FECH "Ferrochelatase, mitochon 0.702 0.594 0.359 2.6e-38
UNIPROTKB|F1P9A3 423 FECH "Ferrochelatase" [Canis l 0.676 0.543 0.377 5.5e-38
TAIR|locus:2180642 FC1 "ferrochelatase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
 Identities = 200/260 (76%), Positives = 228/260 (87%)

Query:    78 GVATYGENAVEYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFR 137
             G  +Y E + +  SH   AEDK+GVLLLNLGGP+TL+DVQPFL+NLFADPDIIRLPR F+
Sbjct:    69 GDCSYDETSAKARSHV-VAEDKIGVLLLNLGGPETLNDVQPFLYNLFADPDIIRLPRPFQ 127

Query:   138 FLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMR 197
             FLQ  +AK ISVVRAPKSKEGYAAIGGGSPLRKITDEQA A+K +L+AKN+  NVYVGMR
Sbjct:   128 FLQGTIAKFISVVRAPKSKEGYAAIGGGSPLRKITDEQADAIKMSLQAKNIAANVYVGMR 187

Query:   198 YWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSII 257
             YWYPFTEEAVQQIK+D+ITRLVVLPLYPQ+SISTTGSSIRVLQ++FR+D YL+ +PV+II
Sbjct:   188 YWYPFTEEAVQQIKKDKITRLVVLPLYPQYSISTTGSSIRVLQDLFRKDPYLAGVPVAII 247

Query:   258 RSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIY 317
             +SWYQR GYVNSMADLI+KEL  F  P+EVMIFFSAHGVPVSYVE AGDPY+ QMEECI 
Sbjct:   248 KSWYQRRGYVNSMADLIEKELQTFSDPKEVMIFFSAHGVPVSYVENAGDPYQKQMEECID 307

Query:   318 LIMQRLKDRGINNDHTLAYQ 337
             LIM+ LK RG+ NDH LAYQ
Sbjct:   308 LIMEELKARGVLNDHKLAYQ 327
GO:0004325 "ferrochelatase activity" evidence=IEA;IGI;ISS
GO:0006783 "heme biosynthetic process" evidence=IEA;ISS;IMP
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009536 "plastid" evidence=IDA
GO:0006979 "response to oxidative stress" evidence=IEP;RCA
GO:0033014 "tetrapyrrole biosynthetic process" evidence=IMP
GO:0006612 "protein targeting to membrane" evidence=RCA
GO:0006944 "cellular membrane fusion" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA
GO:0043069 "negative regulation of programmed cell death" evidence=RCA
GO:0052542 "defense response by callose deposition" evidence=RCA
TIGR_CMR|GSU_3312 GSU_3312 "ferrochelatase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
RGD|1307556 Fech "ferrochelatase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P22600 FECH "Ferrochelatase, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P22830 FECH "Ferrochelatase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:95513 Fech "ferrochelatase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E1C7D2 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NBT4 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|O42479 FECH "Ferrochelatase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P9A3 FECH "Ferrochelatase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3ALP2HEMH_SYNSC4, ., 9, 9, ., 1, ., 10.550.69700.6061yesno
Q69TB1HEMH1_ORYSJ4, ., 9, 9, ., 1, ., 10.70540.85290.6016yesno
P42043HEMH1_ARATH4, ., 9, 9, ., 1, ., 10.74900.77940.5686yesno
A9BEE9HEMH_PROM44, ., 9, 9, ., 1, ., 10.54160.69700.6061yesno
B8HK77HEMH_CYAP44, ., 9, 9, ., 1, ., 10.58570.68820.6046yesno
Q0I8L9HEMH_SYNS34, ., 9, 9, ., 1, ., 10.56660.69700.6061yesno
Q8YQR8HEMH_NOSS14, ., 9, 9, ., 1, ., 10.58150.68820.6030yesno
Q10WR6HEMH_TRIEI4, ., 9, 9, ., 1, ., 10.57740.68820.6046yesno
Q2JHZ4HEMH_SYNJB4, ., 9, 9, ., 1, ., 10.58150.68820.6802yesno
A8G3P0HEMH_PROM24, ., 9, 9, ., 1, ., 10.51030.70.6086yesno
B0JRN7HEMH_MICAN4, ., 9, 9, ., 1, ., 10.59830.68820.6046yesno
Q5N2B2HEMH_SYNP64, ., 9, 9, ., 1, ., 10.59830.68820.6046yesno
Q31S00HEMH_SYNE74, ., 9, 9, ., 1, ., 10.59830.68820.6046yesno
Q7V6C6HEMH_PROMM4, ., 9, 9, ., 1, ., 10.55830.69700.6061yesno
B1XL79HEMH_SYNP24, ., 9, 9, ., 1, ., 10.60660.68820.6062yesno
Q3MCT9HEMH_ANAVT4, ., 9, 9, ., 1, ., 10.57740.68820.6030yesno
B7KGB9HEMH_CYAP74, ., 9, 9, ., 1, ., 10.62340.68820.6046yesno
Q8DGU6HEMH_THEEB4, ., 9, 9, ., 1, ., 10.58990.68820.6030yesno
A2C7Q7HEMH_PROM34, ., 9, 9, ., 1, ., 10.55830.69700.6061yesno
Q7VD58HEMH_PROMA4, ., 9, 9, ., 1, ., 10.5250.69700.6061yesno
Q7U5G0HEMH_SYNPX4, ., 9, 9, ., 1, ., 10.56250.69700.6061yesno
A2BQ06HEMH_PROMS4, ., 9, 9, ., 1, ., 10.51450.70.6086yesno
A5GJF5HEMH_SYNPW4, ., 9, 9, ., 1, ., 10.550.69700.6061yesno
Q2JVK5HEMH_SYNJA4, ., 9, 9, ., 1, ., 10.58570.68820.6862yesno
A2BVI7HEMH_PROM54, ., 9, 9, ., 1, ., 10.51030.70.6086yesno
B2J9P0HEMH_NOSP74, ., 9, 9, ., 1, ., 10.58570.68820.6030yesno
Q7NMC7HEMH_GLOVI4, ., 9, 9, ., 1, ., 10.58150.68820.7155yesno
A5GS98HEMH_SYNR34, ., 9, 9, ., 1, ., 10.54810.68820.6046yesno
Q7V2F5HEMH_PROMP4, ., 9, 9, ., 1, ., 10.51030.70.6086yesno
Q46GQ1HEMH_PROMT4, ., 9, 9, ., 1, ., 10.53330.69700.6061yesno
B7K399HEMH_CYAP84, ., 9, 9, ., 1, ., 10.59580.69110.6072yesno
A3PBP9HEMH_PROM04, ., 9, 9, ., 1, ., 10.50410.69700.6061yesno
A2C0Y4HEMH_PROM14, ., 9, 9, ., 1, ., 10.53330.69700.6061yesno
Q31C09HEMH_PROM94, ., 9, 9, ., 1, ., 10.50620.70.6086yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.99.1.10.914
3rd Layer4.99.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
PLN02449 485 PLN02449, PLN02449, ferrochelatase 1e-173
PRK00035333 PRK00035, hemH, ferrochelatase; Reviewed 3e-98
pfam00762311 pfam00762, Ferrochelatase, Ferrochelatase 2e-92
TIGR00109322 TIGR00109, hemH, ferrochelatase 5e-91
COG0276320 COG0276, HemH, Protoheme ferro-lyase (ferrochelata 3e-89
cd03411159 cd03411, Ferrochelatase_N, Ferrochelatase, N-termi 4e-67
PRK12435311 PRK12435, PRK12435, ferrochelatase; Provisional 4e-26
cd00419135 cd00419, Ferrochelatase_C, Ferrochelatase, C-termi 6e-16
cd03409101 cd03409, Chelatase_Class_II, Class II Chelatase: a 4e-05
>gnl|CDD|178068 PLN02449, PLN02449, ferrochelatase Back     alignment and domain information 
 Score =  489 bits (1261), Expect = e-173
 Identities = 198/306 (64%), Positives = 231/306 (75%), Gaps = 4/306 (1%)

Query: 32  VSVSCQSSEGLNNVNRVSSQALAYTVRESYLCGPVQRRNPAGICAAGVATYGENAVEYES 91
            S+S             SS +LA           ++    A   +A      ++      
Sbjct: 26  RSLSLIQCVSSFRSASSSSSSLALRSSSL----RLRANLAASSTSASAVDSPDDDEAVAD 81

Query: 92  HAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVR 151
           H + +E+KVGVLLLNLGGP+TL DVQPFL+NLFADPDIIRLPRLFRFLQ PLA+ IS +R
Sbjct: 82  HPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQKPLAQFISNLR 141

Query: 152 APKSKEGYAAIGGGSPLRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIK 211
           APKSKEGYA+IGGGSPLRKITDEQA+AL  ALEAKNLP  VYVGMRYW+PFTEEA+ QIK
Sbjct: 142 APKSKEGYASIGGGSPLRKITDEQAEALAKALEAKNLPAKVYVGMRYWHPFTEEAIDQIK 201

Query: 212 RDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMA 271
            D IT+LVVLPLYPQFSIST+GSS+R+L++IFRED YL  +  ++I SWYQREGYV +MA
Sbjct: 202 ADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYVKAMA 261

Query: 272 DLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND 331
           DLI+KEL KF  PEEV IFFSAHGVPVSYVE+AGDPY+ QMEEC+ LIM+ LK RGI N 
Sbjct: 262 DLIKKELAKFSDPEEVHIFFSAHGVPVSYVEEAGDPYKAQMEECVDLIMEELKARGILNR 321

Query: 332 HTLAYQ 337
           HTLAYQ
Sbjct: 322 HTLAYQ 327

Length = 485
>gnl|CDD|234585 PRK00035, hemH, ferrochelatase; Reviewed Back     alignment and domain information
>gnl|CDD|216106 pfam00762, Ferrochelatase, Ferrochelatase Back     alignment and domain information
>gnl|CDD|232827 TIGR00109, hemH, ferrochelatase Back     alignment and domain information
>gnl|CDD|223353 COG0276, HemH, Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|239504 cd03411, Ferrochelatase_N, Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>gnl|CDD|183526 PRK12435, PRK12435, ferrochelatase; Provisional Back     alignment and domain information
>gnl|CDD|238240 cd00419, Ferrochelatase_C, Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>gnl|CDD|239503 cd03409, Chelatase_Class_II, Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 340
PLN02449 485 ferrochelatase 100.0
COG0276320 HemH Protoheme ferro-lyase (ferrochelatase) [Coenz 100.0
PF00762316 Ferrochelatase: Ferrochelatase; InterPro: IPR00101 100.0
KOG1321 395 consensus Protoheme ferro-lyase (ferrochelatase) [ 100.0
TIGR00109322 hemH ferrochelatase. Human ferrochelatase, found a 100.0
PRK12435311 ferrochelatase; Provisional 100.0
PRK00035333 hemH ferrochelatase; Reviewed 100.0
cd03411159 Ferrochelatase_N Ferrochelatase, N-terminal domain 100.0
cd00419135 Ferrochelatase_C Ferrochelatase, C-terminal domain 99.57
cd03409101 Chelatase_Class_II Class II Chelatase: a family of 99.26
cd03414117 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (Cbi 98.54
PRK00923126 sirohydrochlorin cobaltochelatase; Reviewed 98.51
PLN02757154 sirohydrochlorine ferrochelatase 98.41
cd03415125 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelata 98.33
PRK02395279 hypothetical protein; Provisional 98.24
cd03412127 CbiK_N Anaerobic cobalamin biosynthetic cobalt che 97.95
PF01903105 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin 97.8
PRK05782 335 bifunctional sirohydrochlorin cobalt chelatase/pre 97.74
TIGR00109322 hemH ferrochelatase. Human ferrochelatase, found a 97.66
PLN02449485 ferrochelatase 97.52
PRK00035333 hemH ferrochelatase; Reviewed 97.52
cd03413103 CbiK_C Anaerobic cobalamin biosynthetic cobalt che 97.5
cd03416101 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (Cbi 97.25
PF00762316 Ferrochelatase: Ferrochelatase; InterPro: IPR00101 97.11
COG2138245 Sirohydrochlorin ferrochelatase [Inorganic ion tra 97.07
PRK12435311 ferrochelatase; Provisional 97.0
PRK02395279 hypothetical protein; Provisional 96.43
PF06180262 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 96.32
COG0276320 HemH Protoheme ferro-lyase (ferrochelatase) [Coenz 96.01
cd00419135 Ferrochelatase_C Ferrochelatase, C-terminal domain 95.99
PF06180262 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 95.18
cd03409101 Chelatase_Class_II Class II Chelatase: a family of 93.39
COG4822265 CbiK Cobalamin biosynthesis protein CbiK, Co2+ che 91.35
KOG1321395 consensus Protoheme ferro-lyase (ferrochelatase) [ 91.27
TIGR00640132 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal 85.31
>PLN02449 ferrochelatase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-73  Score=575.93  Aligned_cols=253  Identities=75%  Similarity=1.205  Sum_probs=235.2

Q ss_pred             ccccccccCCCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCc
Q 019457           88 EYESHAQAAEDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSP  167 (340)
Q Consensus        88 ~~~~~~~~~~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSP  167 (340)
                      ...++.+.+++|+||||+|||||++++||++||+|||+||+||++|+++|++|++|+++|+++|++|++++|++||||||
T Consensus        78 ~~~~~~~~~~~k~gVLLlNlGgPes~~dV~pFL~nlfsD~~II~lP~~~~~~~~~La~~Ia~~R~~ks~~~Y~~IGGgSP  157 (485)
T PLN02449         78 AVADHPKVSEEKVGVLLLNLGGPETLDDVQPFLYNLFADPDIIRLPRLFRFLQKPLAQFISNLRAPKSKEGYASIGGGSP  157 (485)
T ss_pred             cccccccccCCceEEEEEeCCCCCChhHHHHHHHHhcCCCCeeeCchhhhHHHHHHHHHHhccCcHHHHHHHHHCCCCCc
Confidence            56677777888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHhcCCCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhc
Q 019457          168 LRKITDEQAQALKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDA  247 (340)
Q Consensus       168 L~~~T~~Qa~~L~~~L~~~g~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~  247 (340)
                      |+.+|++|+++|++.|++.+.+++|++|||||+||++|+|++|+++|+++||+||||||||.+||||+++.+++++++..
T Consensus       158 L~~iT~~Qa~~Lq~~L~~~~~~~~V~~aMRY~~P~iedal~~l~~~G~~~iVvLPLYPQyS~sTtgSs~~~l~~~~~~~~  237 (485)
T PLN02449        158 LRKITDEQAEALAKALEAKNLPAKVYVGMRYWHPFTEEAIDQIKADGITKLVVLPLYPQFSISTSGSSLRLLESIFREDE  237 (485)
T ss_pred             hHHHHHHHHHHHHHHHhccCCCeEEEEhhhcCCCCHHHHHHHHHhcCCCeEEEEECCcccccccHHHHHHHHHHHHhhcc
Confidence            99999999999999998878889999999999999999999999999999999999999999999999999999887765


Q ss_pred             cCCCCCEEEecCCCCChHHHHHHHHHHHHHHhhcCCCCceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccC
Q 019457          248 YLSRLPVSIIRSWYQREGYVNSMADLIQKELGKFQKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRG  327 (340)
Q Consensus       248 ~~~~~~v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~g  327 (340)
                      ....+++++|++||+||+||+|++++|+++|++++.+++++|||||||||+++++++||||++||++|+++|+++|+..+
T Consensus       238 ~~~~~~~~~I~~~~~~p~yI~A~a~~I~~~l~~~~~~~~~~LlFSAHGlP~~~v~~~GDpY~~q~~~ta~lI~~~L~~~~  317 (485)
T PLN02449        238 YLVNMQHTVIPSWYQREGYVKAMADLIKKELAKFSDPEEVHIFFSAHGVPVSYVEEAGDPYKAQMEECVDLIMEELKARG  317 (485)
T ss_pred             cccCCeeEEeccccCChHHHHHHHHHHHHHHHhccCcCCcEEEEecCCChhhhhhhcCCChHHHHHHHHHHHHHHhCCCC
Confidence            43356899999999999999999999999998876667789999999999999955799999999999999999995433


Q ss_pred             CCCCeEEEEecCC
Q 019457          328 INNDHTLAYQVWF  340 (340)
Q Consensus       328 l~~~~~layQSrf  340 (340)
                      +.++|+++|||||
T Consensus       318 ~~~~~~layQSR~  330 (485)
T PLN02449        318 ILNRHTLAYQSRV  330 (485)
T ss_pred             CCCCeEEEEeCCC
Confidence            3368999999997

>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc Back     alignment and domain information
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00109 hemH ferrochelatase Back     alignment and domain information
>PRK12435 ferrochelatase; Provisional Back     alignment and domain information
>PRK00035 hemH ferrochelatase; Reviewed Back     alignment and domain information
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain Back     alignment and domain information
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed Back     alignment and domain information
>PLN02757 sirohydrochlorine ferrochelatase Back     alignment and domain information
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain Back     alignment and domain information
>PRK02395 hypothetical protein; Provisional Back     alignment and domain information
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain Back     alignment and domain information
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt Back     alignment and domain information
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated Back     alignment and domain information
>TIGR00109 hemH ferrochelatase Back     alignment and domain information
>PLN02449 ferrochelatase Back     alignment and domain information
>PRK00035 hemH ferrochelatase; Reviewed Back     alignment and domain information
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain Back     alignment and domain information
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain Back     alignment and domain information
>PF00762 Ferrochelatase: Ferrochelatase; InterPro: IPR001015 Synonym(s): Protohaem ferro-lyase, Iron chelatase, etc Back     alignment and domain information
>COG2138 Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK12435 ferrochelatase; Provisional Back     alignment and domain information
>PRK02395 hypothetical protein; Provisional Back     alignment and domain information
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] Back     alignment and domain information
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] Back     alignment and domain information
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway Back     alignment and domain information
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ] Back     alignment and domain information
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings Back     alignment and domain information
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism] Back     alignment and domain information
>KOG1321 consensus Protoheme ferro-lyase (ferrochelatase) [Coenzyme transport and metabolism] Back     alignment and domain information
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
2po7_A 359 Crystal Structure Of Human Ferrochelatase Mutant Wi 5e-39
2hre_A 359 Structure Of Human Ferrochelatase Variant E343k Wit 1e-34
4f4d_A 359 F337r Variant Of Human Ferrochelatase Length = 359 1e-34
2qd3_A 359 Wild Type Human Ferrochelatase Crystallized With Am 1e-34
2qd2_A 359 F110a Variant Of Human Ferrochelatase With Protohem 2e-34
1l8x_A 362 Crystal Structure Of Ferrochelatase From The Yeast, 6e-34
3aqi_A 359 H240a Variant Of Human Ferrochelatase Length = 359 9e-34
2pnj_A 359 Crystal Structure Of Human Ferrochelatase Mutant Wi 1e-33
1hrk_A 359 Crystal Structure Of Human Ferrochelatase Length = 1e-33
2po5_A 359 Crystal Structure Of Human Ferrochelatase Mutant Wi 2e-32
3goq_A310 Crystal Structure Of The Tyr13met Variant Of Bacill 6e-18
2ac2_A309 Crystal Structure Of The Tyr13phe Mutant Variant Of 1e-17
1c9e_A306 Structure Of Ferrochelatase With Copper(Ii) N- Meth 2e-17
1c1h_A310 Crystal Structure Of Bacillus Subtilis Ferrochelata 2e-17
1doz_A309 Crystal Structure Of Ferrochelatase Length = 309 2e-17
2h1v_A310 Crystal Structure Of The Lys87ala Mutant Variant Of 5e-17
2q3j_A309 Crystal Structure Of The His183ala Variant Of Bacil 3e-16
2h1w_A310 Crystal Structure Of The His183ala Mutant Variant O 3e-16
2ac4_A309 Crystal Structure Of The His183cys Mutant Variant O 4e-16
2c8j_A311 Crystal Structure Of Ferrochelatase Hemh-1 From Bac 1e-14
>pdb|2PO7|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 341 Replaced By Cys Length = 359 Back     alignment and structure 
Iteration: 1

 Score =  158 bits (399), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 129/231 (55%), Gaps = 11/231 (4%)
Query: 99  KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEG 158
           K G+L+LN+GGP+TL DV  FL  LF D D++ LP     +Q  LA  I+    PK +E 
Sbjct: 4   KTGILMLNMGGPETLGDVHDFLLRLFLDQDLMTLP-----IQNKLAPFIAKRLTPKIQEQ 58
Query: 159 YAAIGGGSPLRKITDEQAQA---LKTALEAKNLPVNVYVGMRYWYPFTEEAVQQIKRDRI 215
           Y  IGGGSP++  T +Q +    L   L     P   Y+G RY +P TEEA+++++RD +
Sbjct: 59  YRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGL 118
Query: 216 TRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275
            R +    YPQ+S STTGSS+  +   + +      +  S I  W      +   AD I 
Sbjct: 119 ERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWSTIDRWPTHHLLIQCFADHIL 178
Query: 276 KELGKF--QKPEEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLK 324
           KEL  F  +K  EV+I FSAH +P+S V + GDPY  ++   +  +M+RL+
Sbjct: 179 KELDHFPLEKRSEVVILFSAHSLPMSVVNR-GDPYPQEVSATVQKVMERLE 228
>pdb|2HRE|A Chain A, Structure Of Human Ferrochelatase Variant E343k With Protoporphyrin Ix Bound Length = 359 Back     alignment and structure
>pdb|4F4D|A Chain A, F337r Variant Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|2QD3|A Chain A, Wild Type Human Ferrochelatase Crystallized With Ammonium Sulfate Length = 359 Back     alignment and structure
>pdb|2QD2|A Chain A, F110a Variant Of Human Ferrochelatase With Protoheme Bound Length = 359 Back     alignment and structure
>pdb|1L8X|A Chain A, Crystal Structure Of Ferrochelatase From The Yeast, Saccharomyces Cerevisiae, With Cobalt(Ii) As The Substrate Ion Length = 362 Back     alignment and structure
>pdb|3AQI|A Chain A, H240a Variant Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|2PNJ|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With Phe 337 Replaced By Ala Length = 359 Back     alignment and structure
>pdb|1HRK|A Chain A, Crystal Structure Of Human Ferrochelatase Length = 359 Back     alignment and structure
>pdb|2PO5|A Chain A, Crystal Structure Of Human Ferrochelatase Mutant With His 263 Replaced By Cys Length = 359 Back     alignment and structure
>pdb|3GOQ|A Chain A, Crystal Structure Of The Tyr13met Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2AC2|A Chain A, Crystal Structure Of The Tyr13phe Mutant Variant Of Bacillus Subtilis Ferrochelatase With Zn(2+) Bound At The Active Site Length = 309 Back     alignment and structure
>pdb|1C9E|A Chain A, Structure Of Ferrochelatase With Copper(Ii) N- Methylmesoporphyrin Complex Bound At The Active Site Length = 306 Back     alignment and structure
>pdb|1C1H|A Chain A, Crystal Structure Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 310 Back     alignment and structure
>pdb|1DOZ|A Chain A, Crystal Structure Of Ferrochelatase Length = 309 Back     alignment and structure
>pdb|2H1V|A Chain A, Crystal Structure Of The Lys87ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2Q3J|A Chain A, Crystal Structure Of The His183ala Variant Of Bacillus Subtilis Ferrochelatase In Complex With N-Methyl Mesoporphyrin Length = 309 Back     alignment and structure
>pdb|2H1W|A Chain A, Crystal Structure Of The His183ala Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 310 Back     alignment and structure
>pdb|2AC4|A Chain A, Crystal Structure Of The His183cys Mutant Variant Of Bacillus Subtilis Ferrochelatase Length = 309 Back     alignment and structure
>pdb|2C8J|A Chain A, Crystal Structure Of Ferrochelatase Hemh-1 From Bacillus Anthracis, Str. Ames Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query340
1lbq_A 362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 1e-114
3hcn_A 359 Ferrochelatase, mitochondrial; metal selectivity, 1e-111
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 1e-94
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Length = 362 Back     alignment and structure
 Score =  334 bits (858), Expect = e-114
 Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 12/244 (4%)

Query: 99  KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEG 158
             G++L+N+GGP  + +   FL+ LFAD D+I +   +   Q  +AK I+  R PK ++ 
Sbjct: 7   PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQ 63

Query: 159 YAAIGGGSPLRKITDEQAQALKTALEAK---NLPVNVYVGMRYWYPFTEEAVQQIKRDRI 215
           Y  IGGGSP+RK ++ QA  +   L+       P   YV  RY  P T E  +Q+ +D +
Sbjct: 64  YREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGV 123

Query: 216 TRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275
            + V    YP FS STTGSSI  L    +       +  S+I  W   EG + + ++ I 
Sbjct: 124 KKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENIT 183

Query: 276 KELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHT 333
           K+L +F +P  ++V++ FSAH +P+  V   GD Y  ++   +Y IMQ+L      N + 
Sbjct: 184 KKLQEFPQPVRDKVVLLFSAHSLPMDVVNT-GDAYPAEVAATVYNIMQKL---KFKNPYR 239

Query: 334 LAYQ 337
           L +Q
Sbjct: 240 LVWQ 243
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Length = 359 Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Length = 310 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
3hcn_A 359 Ferrochelatase, mitochondrial; metal selectivity, 100.0
1lbq_A 362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 100.0
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 100.0
2xvy_A269 Chelatase, putative; metal binding protein; HET: H 99.67
2jh3_A 474 Ribosomal protein S2-related protein; CBIX, SAD ph 99.53
2xwp_A264 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 99.33
3lyh_A126 Cobalamin (vitamin B12) biosynthesis CBIX protein; 98.89
1tjn_A156 Sirohydrochlorin cobaltochelatase; AF0721, APC5049 98.85
2xws_A133 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 98.83
2xwp_A264 Sirohydrochlorin cobaltochelatase; lyase, beta-alp 97.82
2h1v_A310 Ferrochelatase; rossman fold, PI-helix, lyase; 1.2 97.53
2xvy_A269 Chelatase, putative; metal binding protein; HET: H 97.53
3hcn_A359 Ferrochelatase, mitochondrial; metal selectivity, 97.36
1lbq_A362 Ferrochelatase; rossmann fold, PI-helix, lyase; 2. 97.22
2jh3_A 474 Ribosomal protein S2-related protein; CBIX, SAD ph 94.52
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-69  Score=528.29  Aligned_cols=235  Identities=39%  Similarity=0.661  Sum_probs=218.5

Q ss_pred             CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 019457           97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA  176 (340)
Q Consensus        97 ~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Qa  176 (340)
                      ++|+||||||||||++++||++||+|||+||+||++|.     +++|+++|+++|++|++++|+.|||||||+.+|++|+
T Consensus         2 ~~k~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~   76 (359)
T 3hcn_A            2 KPKTGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQG   76 (359)
T ss_dssp             CCCEEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHH
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHH
Confidence            56899999999999999999999999999999999983     5689999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC---CCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCCCCC
Q 019457          177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP  253 (340)
Q Consensus       177 ~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~  253 (340)
                      ++|++.|++.+   .+++|++|||||+|+|+|+|++|+++|+++||+||||||||.+||||+++.+.+.+++....+.++
T Consensus        77 ~~L~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~  156 (359)
T 3hcn_A           77 EGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMK  156 (359)
T ss_dssp             HHHHHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSE
T ss_pred             HHHHHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCc
Confidence            99999998754   468999999999999999999999999999999999999999999999999999988765555567


Q ss_pred             EEEecCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccCCCCC
Q 019457          254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND  331 (340)
Q Consensus       254 v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~--~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~gl~~~  331 (340)
                      +++|++||+||+||+|++++|++++++++.+  ++++|||||||||+++++ +||||.+||++|+++|+++|   |+.++
T Consensus       157 ~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~~-~GDpY~~q~~~t~~lv~e~L---g~~~~  232 (359)
T 3hcn_A          157 WSTIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVN-RGDPYPQEVSATVQKVMERL---EYCNP  232 (359)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred             eEEeCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhcc-cCCCHHHHHHHHHHHHHHHc---CCCCC
Confidence            9999999999999999999999999987642  457899999999999996 69999999999999999999   77667


Q ss_pred             eEEEEecCC
Q 019457          332 HTLAYQVWF  340 (340)
Q Consensus       332 ~~layQSrf  340 (340)
                      |.++|||||
T Consensus       233 ~~l~~QSr~  241 (359)
T 3hcn_A          233 YRLVWQSKV  241 (359)
T ss_dssp             EEEEEECCS
T ss_pred             EEEEEEcCC
Confidence            999999997
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Back     alignment and structure
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* Back     alignment and structure
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} Back     alignment and structure
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* Back     alignment and structure
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei} Back     alignment and structure
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3 Back     alignment and structure
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A Back     alignment and structure
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A* Back     alignment and structure
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A Back     alignment and structure
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A* Back     alignment and structure
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A* Back     alignment and structure
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A Back     alignment and structure
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 340
d1lbqa_ 356 c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Sacch 3e-52
d2hrca1 359 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sa 2e-50
d2hk6a1309 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtil 5e-41
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 356 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  174 bits (442), Expect = 3e-52
 Identities = 82/240 (34%), Positives = 127/240 (52%), Gaps = 9/240 (3%)

Query: 99  KVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEG 158
             G++L+N+GGP  + +   FL+ LFAD D+I +   +   Q  +AK I+  R PK ++ 
Sbjct: 3   PTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKY---QKTIAKYIAKFRTPKIEKQ 59

Query: 159 YAAIGGGSPLRKITDEQAQALKTALE---AKNLPVNVYVGMRYWYPFTEEAVQQIKRDRI 215
           Y  IGGGSP+RK ++ QA  +   L+    +  P   YV  RY  P T E  +Q+ +D +
Sbjct: 60  YREIGGGSPIRKWSEYQATEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGV 119

Query: 216 TRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLPVSIIRSWYQREGYVNSMADLIQ 275
            + V    YP FS STTGSSI  L    +       +  S+I  W   EG + + ++ I 
Sbjct: 120 KKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIKAFSENIT 179

Query: 276 KELGKFQKPE--EVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINNDHT 333
           K+L +F +P   +V++ FSAH +P+  V   GD Y  ++   +Y IMQ+LK +       
Sbjct: 180 KKLQEFPQPVRDKVVLLFSAHSLPMDVVNT-GDAYPAEVAATVYNIMQKLKFKNPYRLVW 238
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Length = 359 Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Length = 309 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query340
d1lbqa_ 356 Ferrochelatase {Baker's yeast (Saccharomyces cerev 100.0
d2hrca1 359 Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] 100.0
d2hk6a1309 Ferrochelatase {Bacillus subtilis [TaxId: 1423]} 100.0
d1qgoa_257 Cobalt chelatase CbiK {Salmonella typhimurium [Tax 99.19
d1qgoa_257 Cobalt chelatase CbiK {Salmonella typhimurium [Tax 97.41
d1tjna_125 Sirohydrochlorin cobaltochelatase CbiX {Archaeon A 96.66
d2hrca1359 Ferrochelatase {Human (Homo sapiens) [TaxId: 9606] 96.64
d2hk6a1309 Ferrochelatase {Bacillus subtilis [TaxId: 1423]} 95.99
d1lbqa_356 Ferrochelatase {Baker's yeast (Saccharomyces cerev 93.95
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: Chelatase
family: Ferrochelatase
domain: Ferrochelatase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.6e-68  Score=521.83  Aligned_cols=237  Identities=35%  Similarity=0.636  Sum_probs=219.2

Q ss_pred             CCceEEEEEccCCCCCcCcHHHHHHhhcCCCCcccCChhhhhhhhHHHHHHHhccchhhHHhhcccCCCCchhHHHHHHH
Q 019457           97 EDKVGVLLLNLGGPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQWPLAKLISVVRAPKSKEGYAAIGGGSPLRKITDEQA  176 (340)
Q Consensus        97 ~~k~aVLLlNlG~P~s~~dV~~FL~~~l~D~~VI~lP~~~~~~~~~L~~lI~~~R~~ksa~~Y~~IGggSPL~~~T~~Qa  176 (340)
                      ++|+||||||||||++++||++||++||+||+||++|+++|   ++|..+|+++|++|++++|++|||||||+.+|++|+
T Consensus         1 k~~tgVLL~nlGtP~s~~~V~~yL~~fl~D~~vi~~p~~~~---~~l~~~I~~~R~~k~a~~Y~~IgggSPL~~~t~~qa   77 (356)
T d1lbqa_           1 RSPTGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAKYQ---KTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQA   77 (356)
T ss_dssp             CCCEEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSSSH---HHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHH
T ss_pred             CCceEEEEEECCCCCChHHHHHHHHHHcCCCccccCCHHHH---HHHhhhcCccCCHHHHHHHHHcCCCChhHHHHHHHH
Confidence            46899999999999999999999999999999999998654   478889999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC---CCceeEeeeeccCCCHHHHHHHHHHcCCCEEEEEecCCCccccchHHHHHHHHHHHHhhccCCCCC
Q 019457          177 QALKTALEAKN---LPVNVYVGMRYWYPFTEEAVQQIKRDRITRLVVLPLYPQFSISTTGSSIRVLQNIFREDAYLSRLP  253 (340)
Q Consensus       177 ~~L~~~L~~~g---~~~~V~~aMrY~~P~i~eal~~l~~~G~~~IvvlPLyPqYS~sTtgS~~~~l~~~~~~~~~~~~~~  253 (340)
                      ++|++.|++.+   .++.|++|||||+|+|+++|++|+++|+++||+||||||||.+|||++++.+.+++++....+.+.
T Consensus        78 ~~l~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ilvlPlyPqyS~sTt~s~~~~v~~~l~~~~~~~~~~  157 (356)
T d1lbqa_          78 TEVCKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSIS  157 (356)
T ss_dssp             HHHHHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSE
T ss_pred             HHHHHHhhccccccCCceeEEEeccccccHHHHHHHHHhCCCcceEEEecchhhhHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            99999998753   468999999999999999999999999999999999999999999999999999987665545567


Q ss_pred             EEEecCCCCChHHHHHHHHHHHHHHhhcCCC--CceEEEEEecCCchhhhccCCCchHHHHHHHHHHHHHHhhccCCCCC
Q 019457          254 VSIIRSWYQREGYVNSMADLIQKELGKFQKP--EEVMIFFSAHGVPVSYVEKAGDPYRDQMEECIYLIMQRLKDRGINND  331 (340)
Q Consensus       254 v~~I~~~~~~p~yI~a~a~~I~~~L~~~~~~--~~~~LlFSaHglP~~~ie~~GDpY~~q~~~T~~~Iae~L~~~gl~~~  331 (340)
                      +++|++||+||.||+|++++|+++++.++.+  ++++|||||||||+++++ +||||..||.+|+++|+++|   |+.++
T Consensus       158 ~~~I~~~~~~p~yI~a~a~~i~~~l~~~~~~~~~~~~LlfS~HgiP~~~~~-~gdpY~~q~~~t~~~v~~~l---~~~~~  233 (356)
T d1lbqa_         158 WSVIDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVVN-TGDAYPAEVAATVYNIMQKL---KFKNP  233 (356)
T ss_dssp             EEEECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHHT-TTCSHHHHHHHHHHHHHHHT---TTCSC
T ss_pred             ceeecccccchhHHHHHHHHHHHHHHHcCcccccCcEEEEecCCcccchhh-cCCCchHHHHHHHHHHhhhc---ccccc
Confidence            9999999999999999999999999987643  457899999999999996 79999999999999999999   66668


Q ss_pred             eEEEEecCC
Q 019457          332 HTLAYQVWF  340 (340)
Q Consensus       332 ~~layQSrf  340 (340)
                      |.++|||||
T Consensus       234 ~~~~fQSr~  242 (356)
T d1lbqa_         234 YRLVWQSQV  242 (356)
T ss_dssp             EEEEEECCC
T ss_pred             eEEEeeccc
Confidence            999999997
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qgoa_ c.92.1.2 (A:) Cobalt chelatase CbiK {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1tjna_ c.92.1.3 (A:) Sirohydrochlorin cobaltochelatase CbiX {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2hrca1 c.92.1.1 (A:65-423) Ferrochelatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hk6a1 c.92.1.1 (A:2-310) Ferrochelatase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1lbqa_ c.92.1.1 (A:) Ferrochelatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure