Citrus Sinensis ID: 019462

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340
Protein Sequence
MATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDDYQSQADYGR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHcccccHHHHHHccccccccHHHHHcccccccccccccccEEEEEEEcccccEEEEccEEEccccccccccEEEEccccEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHcccccccEEcHHHHcccccccEEcccccccEEEEEEEccEEEEccEEEEcccEEEEccEEEEEEcccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHcccHHHccccccEEEEEcccHHHHccccccHHHHHEccccccccHHHHHccccccEccccccccEEEEEEccccccEEEEccEEEEccccEcccEEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHccccccHHHHHHEHEcccHccHHHHHHcccccEEcccccccEEEEEEcccEEEEccEEEEcccEEEccEEEEEEccccccccccccEEcccccEEEccccccccccccc
Coil and Loop (DISEMBL)
MATLIIFSLIIFSLISIALavspgtlsNAVETLSNSGYLSMALTLQITFKTlnlesktltifspsdfsfsqsgqlslsqlqyhispsrlsqdslktlafgsrlptllsnhslivtvsdfnnahlsingvliqespmfdqeELVVYGIDeffnssfgvmisppphsapvpspvpspiepigfdvdvfGEASDLLNSRGYTLMATFLDMQLArftnqtrltifapvdaamepyVKNITDCVSIFKQHVVLRLLRWQDLirldggttlptssegfKITVAYSGDvillngvpvvfpdmyssnwLVVHGLDSllavspldekiigdsfselngddyqsqadygr
Flexible Loop (DISEMBL)
MATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGgttlptssegFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGdsfselngddyqsqadygr
Low Complexity Region (SEG)
MATliifsliifslisiALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPsdfsfsqsgqlslsqlqYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMisppphsapvpspvpspiepiGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDDYQSQADYGR
Disordered region (IsUnstruct)
**TLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDF**************************LKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMI*****************EPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGD******************
Disordered Region (DISOPRED)
*ATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLD************************
Disordered Region (DISEMBL)
MATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDD*********
Disordered Region (DISPRO)
*ATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHS**VPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELN************
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDDYQSQADYGR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	340	2.2.26 [Sep-21-2011]
Q9FGW0	424	Putative fasciclin-like a	yes	no	0.985	0.790	0.390	6e-62
Q9FL53	353	Fasciclin-like arabinogal	no	no	0.811	0.781	0.265	9e-12
Q5Q0H2	248	Fasciclin-like arabinogal	no	no	0.417	0.572	0.296	2e-06

>sp|Q9FGW0|FLA20_ARATH Putative fasciclin-like arabinogalactan protein 20 OS=Arabidopsis thaliana GN=FLA20 PE=3 SV=1

 Score =  238 bits (606), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/369 (39%), Positives = 222/369 (60%), Gaps = 34/369 (9%)

Query: 4   LIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLES-KTLTIF 62
           L  F LI F L    +A S  ++S+AVE LS+SGYLSM LTL++  + LNLE  + LT+F
Sbjct: 47  LTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLF 106

Query: 63  SPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNA 122
           +PSD SFS+ GQ SL  ++Y +SP+RL  ++L+ L  G+++PTL SN+SL VT S     
Sbjct: 107 APSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGG 166

Query: 123 HLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMIS-------------------PPP 163
             SIN V++Q+SP+FD   +V+YG DEFF S   +                      P  
Sbjct: 167 KTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSS 226

Query: 164 HSAPVPSP---------VPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFT- 213
            +   PSP         +P+  +P+    ++F  AS LL SRG+ ++ATFL +QL   T 
Sbjct: 227 ATQTPPSPNIASDSTRNLPNRSKPVN-RFNIFESASRLLMSRGFVIIATFLALQLEDNTS 285

Query: 214 -NQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRL-DGGTTLPTSSEG 271
            N T++T+FAP+D A+       +D V+IF+ HVV +LL W+DL +    G+ L T  +G
Sbjct: 286 GNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKG 345

Query: 272 FKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDD 331
           ++I ++ SGD++LLNGVP+++PD+Y ++W+ VHG + ++ V+   +  +GDS + LN  +
Sbjct: 346 YEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMI-VTKEKQVDVGDSITVLNNGE 404

Query: 332 YQSQADYGR 340
            + +  +G 
Sbjct: 405 QEEEGVHGE 413

May be a cell surface adhesion protein.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL53|FLA21_ARATH Fasciclin-like arabinogalactan protein 21 OS=Arabidopsis thaliana GN=FLA21 PE=2 SV=1

 Score = 71.2 bits (173), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 33/309 (10%)

Query: 28  NAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLS---LSQL-QYH 83
           NA  TL  S + ++A  L I+ +     S   T+F+  D SF  +  L    L QL  YH
Sbjct: 51  NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYH 110

Query: 84  ISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELV 143
             P  LS D L     G+ LPTLL + S+ ++  +  +    +N V I    MF  + LV
Sbjct: 111 TLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLV 170

Query: 144 VYGIDEFFN----SSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYT 199
           ++G+   F+     S  ++ +P   S        +   P+  D   +     LL+S G+ 
Sbjct: 171 IHGVIGPFSPLQPHSDHLIHTPLCQSDTTNKTSNNEEVPVSID---WTRIVQLLSSNGFV 227

Query: 200 LMATFLDMQLARFTNQ-------TRLTIFAPVD----AAMEPYVKNITDCVSIFKQHVVL 248
             A  L   L R  N        T +TI A  +    ++  P++        + + H+++
Sbjct: 228 PFAIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPFL------YEVVRHHILV 281

Query: 249 RLLRWQDLIRLDGGTTLPT--SSEGFKIT---VAYSGDVILLNGVPVVFPDMYSSNWLVV 303
           + L ++D   +    T+ T    +   IT   V  SG   +++GV +V PDM+SS+  V+
Sbjct: 282 QRLTYKDFASMSDKATVKTLDPYQDLTITRRNVNSSGGDFMISGVEIVDPDMFSSSNFVI 341

Query: 304 HGLDSLLAV 312
           HG+   L +
Sbjct: 342 HGISHTLEI 350

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

>sp|Q5Q0H2|FLA19_ARATH Fasciclin-like arabinogalactan protein 19 OS=Arabidopsis thaliana GN=FLA19 PE=2 SV=2

 Score = 53.9 bits (128), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 10/152 (6%)

Query: 8   SLIIFSLISIALAVSPGTLSNAVETLSNSG---YLSMALTLQITFKTLNLESKTLTIFSP 64
           +LII  L   +  V    L  A+  L   G   + +  +T  + F  L+ ES  LT+F+P
Sbjct: 17  ALIILCLPHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLSDES--LTLFAP 74

Query: 65  SD-----FSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDF 119
           +D        + S    +S L+ H  P RLS   L++L   S LPTLL +H L++T    
Sbjct: 75  TDSMLFDLDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSS 134

Query: 120 NNAHLSINGVLIQESPMFDQEELVVYGIDEFF 151
           +N  + ++GV +    +FD + + V+G+ +  
Sbjct: 135 SNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL 166

May be a cell surface adhesion protein.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
224127404	352	fasciclin-like arabinogalactan protein [	0.894	0.863	0.561	1e-81
225451451	360	PREDICTED: putative fasciclin-like arabi	0.917	0.866	0.476	2e-70
225424180	339	PREDICTED: putative fasciclin-like arabi	0.976	0.979	0.433	4e-63
15237522	424	putative fasciclin-like arabinogalactan	0.985	0.790	0.390	4e-60
255588116	339	hypothetical protein RCOM_0377590 [Ricin	0.958	0.961	0.438	3e-57
224101815	348	predicted protein [Populus trichocarpa]	0.85	0.830	0.433	4e-56
297801478	380	hypothetical protein ARALYDRAFT_493882 [	0.885	0.792	0.395	1e-54
224099453	292	predicted protein [Populus trichocarpa]	0.729	0.849	0.420	7e-52
449517307	328	PREDICTED: putative fasciclin-like arabi	0.841	0.871	0.402	7e-50
357444555	340	Fasciclin-like arabinogalactan protein [	0.847	0.847	0.398	2e-49

>gi|224127404|ref|XP_002329269.1| fasciclin-like arabinogalactan protein [Populus trichocarpa] gi|222870723|gb|EEF07854.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 174/310 (56%), Positives = 220/310 (70%), Gaps = 6/310 (1%)

Query: 26  LSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHIS 85
            SNA+E LS SGYLSMALTL+IT K L+LES   TIF+P D +F++ GQLS+  LQYHIS
Sbjct: 25  FSNAMEILSTSGYLSMALTLEITSKRLHLESSAATIFAPLDIAFARLGQLSVLDLQYHIS 84

Query: 86  PSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVS-DFNNAHLSINGVLIQESPMFDQEELVV 144
           P RLS   L +L FG+R+PTLL NHSLIVT S  + +  LSING+ I+ES + D   L++
Sbjct: 85  PVRLSGYYLDSLPFGTRIPTLLPNHSLIVTTSLSYFDGKLSINGISIEESALVDFGSLII 144

Query: 145 YGIDEFFNSSFGVMISPPPHSAPVPSPVPS-----PIEPIGFDVDVFGEASDLLNSRGYT 199
           +G+ EFFNSS  +  +  P  AP PSPV S       E  G DVD FG+AS LL  RGY+
Sbjct: 145 FGMSEFFNSSLEISPNLTPAPAPSPSPVTSLGNTSQNESTGLDVDFFGQASHLLMPRGYS 204

Query: 200 LMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRL 259
           +M TFLD QL    NQTRLTIFAPVD AM+ Y KN++D  SIF++HVV  L   QDL   
Sbjct: 205 IMGTFLDAQLFGIKNQTRLTIFAPVDQAMDAYAKNVSDYSSIFRKHVVPGLFPRQDLEGF 264

Query: 260 DGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKI 319
           + GT+LPT S GF I +  SGDV++LNGVPV+FPDMY S+WL++HGL+ LL     +E++
Sbjct: 265 NDGTSLPTFSGGFMINLTKSGDVLVLNGVPVIFPDMYQSDWLIIHGLNQLLMPPLKEEEL 324

Query: 320 IGDSFSELNG 329
           +G+SFSEL+G
Sbjct: 325 VGESFSELDG 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451451|ref|XP_002274002.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/315 (47%), Positives = 201/315 (63%), Gaps = 3/315 (0%)

Query: 25  TLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHI 84
           T+ +A + LS+SGYLSMAL LQ  F+TL L+S T T+F+PSD +F +SGQ  L  LQYH 
Sbjct: 27  TVVDAADVLSDSGYLSMALNLQTVFQTLLLQSPTATVFAPSDSAFVRSGQPPLFLLQYHT 86

Query: 85  SPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVV 144
            P RLS + LK L +G+ +PT+L N SLIVT SD + A LSIN V + E  ++D   +V+
Sbjct: 87  LPQRLSLEDLKALPYGTSIPTMLLNRSLIVTTSDVD-ALLSINNVTVNELTVYDAGSVVI 145

Query: 145 YGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATF 204
           YG+DEFF+ SF +  +  P   P  +           DVD FGEASDLL SRGY+ MA F
Sbjct: 146 YGVDEFFDPSFRIYSNSVPEQCPGRNDFFEQETSSFEDVDCFGEASDLLRSRGYSKMAAF 205

Query: 205 LDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTT 264
           +DMQL  F + T +TIFAPVD ++E + KN +D   +F+QHVV   L W+ +  L+ G  
Sbjct: 206 MDMQLTGFGDGTSVTIFAPVDESIEEHAKNFSDYSVMFRQHVVPGWLPWKVMSGLEAGAM 265

Query: 265 LPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSF 324
           LPT SE F+I +   GD++ LNGVP++F DM+  NWLVVHGLD L+  S + + +   SF
Sbjct: 266 LPTFSEDFRIKITRFGDILALNGVPILFMDMFCCNWLVVHGLDQLV-TSSIKQDLKEGSF 324

Query: 325 SELNGDDYQSQADYG 339
              N D+    A  G
Sbjct: 325 FAFN-DNVDENAKEG 338

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225424180|ref|XP_002280452.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Vitis vinifera]

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/344 (43%), Positives = 215/344 (62%), Gaps = 12/344 (3%)

Query: 1   MATLIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLT 60
           MA  ++ SLIIF L S++ ++   T+ +A E LS+SGY+SM+LTL++  +TL  +S + T
Sbjct: 1   MAYSLLTSLIIFCLFSLSSSLPSQTILDAAEILSDSGYVSMSLTLELVSQTLLPKSPSAT 60

Query: 61  IFSPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFN 120
           +F+ SD +F +SGQ  LS LQ+H SP  LS +SL++L  G+++PT+ +NHSLIVT S  +
Sbjct: 61  LFAASDAAFIESGQPPLSLLQFHSSPLALSFESLRSLPVGAKIPTMFANHSLIVT-SAAS 119

Query: 121 NAHLSINGVLIQESPMFDQEELVVYGIDEFFNSSF---GVMISPPPHSAPVPSPVPSPIE 177
           ++ +S+N V I  SP+FD   L+++G+D+FF+ +F   G+  SP P++      + S   
Sbjct: 120 DSQISLNNVNITSSPLFDDGSLIIFGVDKFFDLNFPALGLTRSPSPNTGCTDDAIASS-- 177

Query: 178 PIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITD 237
                 D F EAS +L SRGY +MA+FLD+QL  F + T++T+ AP D  M   V N +D
Sbjct: 178 ----GGDSFDEASGVLRSRGYFVMASFLDLQLLGFRDGTKMTVLAPADEVMMDRVGNFSD 233

Query: 238 -CVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMY 296
              SIF +HV+   + W DL+  D G+ LPTS EGF I +  SGD + LN V V FPDMY
Sbjct: 234 ISSSIFLRHVLPCKVSWSDLVNFDDGSMLPTSLEGFTINITRSGDTLKLNEVSVAFPDMY 293

Query: 297 SSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDDYQSQADYGR 340
            S+WLVVHGL  +L +    E+   DS SE  G     Q   G 
Sbjct: 294 HSDWLVVHGLGEVLTLLVGPEQ-AADSSSETGGSKTNEQTALGN 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237522|ref|NP_198910.1| putative fasciclin-like arabinogalactan protein 20 [Arabidopsis thaliana] gi|75170504|sp|Q9FGW0.1|FLA20_ARATH RecName: Full=Putative fasciclin-like arabinogalactan protein 20 gi|10177432|dbj|BAB10524.1| unnamed protein product [Arabidopsis thaliana] gi|332007234|gb|AED94617.1| putative fasciclin-like arabinogalactan protein 20 [Arabidopsis thaliana]

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 144/369 (39%), Positives = 222/369 (60%), Gaps = 34/369 (9%)

Query: 4   LIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNLES-KTLTIF 62
           L  F LI F L    +A S  ++S+AVE LS+SGYLSM LTL++  + LNLE  + LT+F
Sbjct: 47  LTTFFLIFFVLDIDLVATSMTSVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLF 106

Query: 63  SPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNA 122
           +PSD SFS+ GQ SL  ++Y +SP+RL  ++L+ L  G+++PTL SN+SL VT S     
Sbjct: 107 APSDQSFSKFGQPSLLDMKYQLSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGG 166

Query: 123 HLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMIS-------------------PPP 163
             SIN V++Q+SP+FD   +V+YG DEFF S   +                      P  
Sbjct: 167 KTSINNVVVQDSPVFDDGYVVIYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSS 226

Query: 164 HSAPVPSP---------VPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFT- 213
            +   PSP         +P+  +P+    ++F  AS LL SRG+ ++ATFL +QL   T 
Sbjct: 227 ATQTPPSPNIASDSTRNLPNRSKPVN-RFNIFESASRLLMSRGFVIIATFLALQLEDNTS 285

Query: 214 -NQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRL-DGGTTLPTSSEG 271
            N T++T+FAP+D A+       +D V+IF+ HVV +LL W+DL +    G+ L T  +G
Sbjct: 286 GNDTKITVFAPIDEAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKG 345

Query: 272 FKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIGDSFSELNGDD 331
           ++I ++ SGD++LLNGVP+++PD+Y ++W+ VHG + ++ V+   +  +GDS + LN  +
Sbjct: 346 YEIEISLSGDILLLNGVPLIYPDLYVNDWIAVHGFNQMI-VTKEKQVDVGDSITVLNNGE 404

Query: 332 YQSQADYGR 340
            + +  +G 
Sbjct: 405 QEEEGVHGE 413

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255588116|ref|XP_002534506.1| hypothetical protein RCOM_0377590 [Ricinus communis] gi|223525155|gb|EEF27876.1| hypothetical protein RCOM_0377590 [Ricinus communis]

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 146/333 (43%), Positives = 207/333 (62%), Gaps = 7/333 (2%)

Query: 4   LIIFSLIIFSLISIALAVSPGTLSNAVETLSNSGYLSMALTLQITFKTLNL-ESKTLTIF 62
           L+I S+  F  IS+  ++   TL  A E LSNSGYLSM+LTLQ+   T  +  S +LTIF
Sbjct: 10  LMILSVFFFFSISMTTSLPTSTLVRAAEMLSNSGYLSMSLTLQLISSTWIIPHSPSLTIF 69

Query: 63  SPSDFSFSQSGQLSLSQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNA 122
           SPSD +F+QSGQ SLS LQ+H+ P     +SL+ L FGS++PTL SN S  +T+ + +N 
Sbjct: 70  SPSDSAFAQSGQPSLSLLQFHLCPLSFHLNSLRALPFGSKIPTLSSNLS--ITIVNDDNG 127

Query: 123 HLSINGVLIQESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFD 182
            + +NGV I   P +D   LVV G+D+F +  F V ++ PP   PVPS   +        
Sbjct: 128 TVFLNGVKILGCP-YDDGSLVVLGVDKFLDPDFVVSLASPPSPVPVPSANLACGSDFKNG 186

Query: 183 VDVFGEASDLLNSRGYTLMATFLDMQL-ARFTNQTR--LTIFAPVDAAMEPYVKNITDCV 239
           V +F EA+++L S G ++MA+FLD+QL + F  + R  LT+FAP+D  M+ ++ ++    
Sbjct: 187 VYLFKEATNVLRSNGCSVMASFLDLQLMSGFKEKQRPLLTVFAPLDEVMKGFIGDVDQYS 246

Query: 240 SIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSN 299
            IF +HVV   + W+DL+  D G    T  EGF ITV+ SGD+++LN VPV FPDMY + 
Sbjct: 247 LIFLRHVVPCKITWKDLVDFDDGMVFDTFLEGFGITVSRSGDILMLNEVPVSFPDMYRNE 306

Query: 300 WLVVHGLDSLLAVSPLDEKIIGDSFSELNGDDY 332
           WLVVHGL  +L      +++   SF  LN DD+
Sbjct: 307 WLVVHGLRGMLDGPDRKQEVRKSSFQFLNDDDF 339

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101815|ref|XP_002312431.1| predicted protein [Populus trichocarpa] gi|222852251|gb|EEE89798.1| predicted protein [Populus trichocarpa]

 Score =  224 bits (571), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/302 (43%), Positives = 188/302 (62%), Gaps = 13/302 (4%)

Query: 28  NAVETLSNSGYLSMALTLQITFKT-LNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHISP 86
           +A + LSNSGY++MAL L+   +T L   S++LTIFSPSD +FS SGQ SL  L +H +P
Sbjct: 29  DATQILSNSGYVAMALILEFGSQTDLIPPSQSLTIFSPSDTAFSLSGQPSLDLLHFHFTP 88

Query: 87  SRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYG 146
              S +SLK+L  G ++PTL SNHSL+++ +   ++  S+NGV I  S ++D   LV++G
Sbjct: 89  RSFSLNSLKSLPPGYQIPTLFSNHSLVISSN--ADSQTSVNGVKINGSALYDDGFLVIFG 146

Query: 147 IDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLD 206
           +D F +  F V  S    +  +     +     G D   F EAS +L SRGY++MA+FLD
Sbjct: 147 VDNFLDPDFTVSGSINGSTGGIRGCYVTS----GDDDCSFEEASGVLKSRGYSVMASFLD 202

Query: 207 MQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLP 266
           +QLA+F + TRLTI APVD  ++ ++ + +D  SIF +HVV   + W+DL+ LD G  LP
Sbjct: 203 LQLAKFKDHTRLTILAPVDEVLKGFMGDFSDYRSIFLRHVVPCKISWRDLVSLDDGVVLP 262

Query: 267 TSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL------AVSPLDEKII 320
           T   GFKI V  S   ++ NGV V+ P++YS++WL VHGL   L      A +   EKI+
Sbjct: 263 TYLRGFKINVTVSSTFLMFNGVQVIVPEIYSNSWLTVHGLGGSLVMQEPTATASNAEKIV 322

Query: 321 GD 322
            D
Sbjct: 323 VD 324

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297801478|ref|XP_002868623.1| hypothetical protein ARALYDRAFT_493882 [Arabidopsis lyrata subsp. lyrata] gi|297314459|gb|EFH44882.1| hypothetical protein ARALYDRAFT_493882 [Arabidopsis lyrata subsp. lyrata]

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 209/336 (62%), Gaps = 35/336 (10%)

Query: 25  TLSNAVETLSNSGYLSMALTLQITFKTLNLES-KTLTIFSPSDFSFSQSGQLSLSQLQYH 83
           ++S+AVE LS+SGYLSM LTLQ+  + LNLE  + LTIF+PSD  FS+ GQ SL  ++Y 
Sbjct: 25  SVSSAVEVLSDSGYLSMGLTLQLANQDLNLEDWQELTIFAPSDQDFSRFGQPSLLDIKYQ 84

Query: 84  ISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELV 143
           +SP+RL  ++L+ L  G+++PTL S+ SL VT S      +SIN V++Q+SP+FD   +V
Sbjct: 85  LSPTRLPGETLRNLPNGAKIPTLRSDSSLTVTNSSRFGRIISINNVVVQDSPVFDDGYIV 144

Query: 144 VYGIDEFFNS-------------------SFGVMISPPPHSAPVPSP---------VPSP 175
           +YG  EFF S                   S G +  P   +   PSP         +P+ 
Sbjct: 145 IYGSGEFFTSPTKISDDSSSSSSIPNTTSSTGSIPIPSSATHTPPSPKFASDSTRNLPNG 204

Query: 176 IEPIGFDVDVFGEASDLLNSRGYTLMATFLDMQLARFT-NQTRLTIFAPVDAAMEPYVKN 234
            +P+    + F  AS LL SRG+ ++ATFL +QL   + N T++T+FAP+D A+      
Sbjct: 205 SKPVNC-FNNFESASRLLMSRGFVIIATFLALQLEDTSGNDTKITVFAPIDEAIPNPSTK 263

Query: 235 ITDCVSIFKQHVVLRLLRWQDLIRL-DGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFP 293
            +D V+IF+ HV+ RLL W+DL +L   G  L +  +G++I V++SGD++LLNG P+++P
Sbjct: 264 FSDYVTIFRGHVINRLLLWKDLQKLAKEGAILQSVLKGYEIEVSWSGDILLLNGFPLIYP 323

Query: 294 DMYSSNWLVVHGLDSLLAVSPLDEKI-IGDSFSELN 328
           D++ ++W+ VHG + ++   P ++++ +G+S + LN
Sbjct: 324 DLFVNDWIAVHGFNQMIV--PKEKQVNLGESITVLN 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099453|ref|XP_002311490.1| predicted protein [Populus trichocarpa] gi|222851310|gb|EEE88857.1| predicted protein [Populus trichocarpa]

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/288 (42%), Positives = 175/288 (60%), Gaps = 40/288 (13%)

Query: 25  TLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHI 84
           TL  A   LSNSGYLSM+LTL +   +L   + +LTIFSPSD +F+QSGQ  LS L+ H 
Sbjct: 27  TLREAAVILSNSGYLSMSLTLPLVSNSLIPHTPSLTIFSPSDTAFTQSGQPPLSILRLHF 86

Query: 85  SPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVV 144
           SP     +SL++L+ G+++P+L  N+SL +T +      +S+NGV I++SP++D   LV+
Sbjct: 87  SPLSFPLNSLESLSLGAKIPSLFPNYSLTITST---GDDVSLNGVKIKDSPVYDDGSLVI 143

Query: 145 YGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATF 204
            G+D FF++ FGV                                   LNS+GY++MA+F
Sbjct: 144 LGVDRFFDTGFGV-----------------------------------LNSKGYSVMASF 168

Query: 205 LDMQL-ARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGT 263
           LD+QL   FT++T LTIFAPVD  ++ ++ ++ +  S+F +H V   + W DL+  D G 
Sbjct: 169 LDLQLMVGFTDKTALTIFAPVDEVIKAFLGDLREYSSMFLKHAVPCKIMWGDLVNFDDGV 228

Query: 264 TLPTSSEGFKITVAYSGDVILLNG-VPVVFPDMYSSNWLVVHGLDSLL 310
            L T  EGF ITV+ SGD ++LN    V FPDMY ++WLV+HGL S+L
Sbjct: 229 VLETYLEGFGITVSTSGDNLMLNDQASVNFPDMYHNDWLVIHGLQSIL 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517307|ref|XP_004165687.1| PREDICTED: putative fasciclin-like arabinogalactan protein 20-like [Cucumis sativus]

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 191/318 (60%), Gaps = 32/318 (10%)

Query: 25  TLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHI 84
           T+ +A E LSN+G++SMALTL++   +L  +S ++TIFSP D SF QSGQ SLS L++H 
Sbjct: 26  TVLDAAEILSNNGFVSMALTLELIADSLLSQSNSITIFSPPDTSFVQSGQPSLSLLRFHF 85

Query: 85  SPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVV 144
            P  LS  SL++ AFG+++PT+L + SL VT    +++ +S+N V +  SP +D   LVV
Sbjct: 86  LPLYLSSGSLRSFAFGTKIPTMLPSQSLTVTTPQ-SDSVISLNRVKVSSSPFYDDGLLVV 144

Query: 145 YGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDV------FGEASDLLNSRGY 198
           YGI++FF+  F        HS             + F  D+      FGEA + L S GY
Sbjct: 145 YGIEKFFDLKF--------HSP-----------NMKFRCDLLTIRNPFGEAIETLRSHGY 185

Query: 199 TLMATFLDMQLARFTN--QTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDL 256
           + MA FL+ Q+  F+N   + +T+FAP D A+E  V   TD  S++ + +    + W DL
Sbjct: 186 SSMALFLESQILGFSNGQSSMMTVFAPSDDALETRVDKFTDYPSLYFRQISPCRISWNDL 245

Query: 257 IRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLD 316
           + L+ GT L T SEG+ I V  S  ++ +NGV V +P+MY + WLVVHG   LL V P+ 
Sbjct: 246 VDLEDGTELSTYSEGYTIYVTKSSGMLRINGVAVFYPNMYLNEWLVVHG---LLDVFPVA 302

Query: 317 EKI-IGDSFSELNGDDYQ 333
           E+I   +S SE+  ++++
Sbjct: 303 ERISTVESDSEMRSNNHE 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444555|ref|XP_003592555.1| Fasciclin-like arabinogalactan protein [Medicago truncatula] gi|355481603|gb|AES62806.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/296 (39%), Positives = 179/296 (60%), Gaps = 8/296 (2%)

Query: 25  TLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPSDFSFSQSGQLSLSQLQYHI 84
           T+ +A + L +SG++SM+LTL+I  ++L  +S + T+F+PSD +F +SGQ SL  L++H 
Sbjct: 27  TIFDAADILLDSGFVSMSLTLEIVAESLLEQSHSATVFAPSDSAFKKSGQPSLDLLRFHF 86

Query: 85  SPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMFDQEELVV 144
               L Q SL+ L  G++LPT+L+  SL VT S F++   S+N + I  +P++D   L+V
Sbjct: 87  VMLPLPQQSLRRLPAGAKLPTMLTGQSLTVTTS-FSDRVTSVNNIKINGTPIYDDGVLLV 145

Query: 145 YGIDEFFNSSF---GVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLM 201
           YGID FF+ +F   G    P  +S    S +   +   G     F +A   L + GY++M
Sbjct: 146 YGIDRFFDPNFQYTGPSRKPNSYSNSSCSALNRTVNSSG----SFEQAVKTLKTSGYSVM 201

Query: 202 ATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDG 261
           A+FL MQL+   NQ  +T+FAP D  +   + +  D  S F++HVV     W DL+    
Sbjct: 202 ASFLGMQLSGNINQNGITVFAPTDEMVMNRIGDFEDYPSFFRRHVVPCKFLWNDLVDFGD 261

Query: 262 GTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLDE 317
           GT LPT  EGF I +  SG V++LNGVPV FPD++ ++ LVVHG+  +LA +  D+
Sbjct: 262 GTQLPTFLEGFSINITRSGGVLILNGVPVFFPDVFFNDRLVVHGVTDVLANAVQDD 317

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	340
TAIR|locus:2167742	424	FLA20 "AT5G40940" [Arabidopsis	0.455	0.365	0.396	2.9e-56
TAIR|locus:2169464	353	FLA21 "AT5G06920" [Arabidopsis	0.370	0.356	0.269	1.3e-09
TAIR|locus:2126535	169	AT4G29980 "AT4G29980" [Arabido	0.3	0.603	0.311	0.00018
TAIR|locus:2037873	248	AT1G15190 "AT1G15190" [Arabido	0.352	0.483	0.276	0.00023

TAIR|locus:2167742 FLA20 "AT5G40940" [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 63/159 (39%), Positives = 106/159 (66%)

Query:   184 DVFGEASDLLNSRGYTLMATFLDMQLARFT--NQTRLTIFAPVDAAMEPYVKNITDCVSI 241
             ++F  AS LL SRG+ ++ATFL +QL   T  N T++T+FAP+D A+       +D V+I
Sbjct:   255 NIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTKFSDYVTI 314

Query:   242 FKQHVVLRLLRWQDLIRL-DGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNW 300
             F+ HVV +LL W+DL +    G+ L T  +G++I ++ SGD++LLNGVP+++PD+Y ++W
Sbjct:   315 FRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVPLIYPDLYVNDW 374

Query:   301 LVVHGLDSLLAVSPLDEKIIGDSFSELNGDDYQSQADYG 339
             + VHG + ++ V+   +  +GDS + LN  + + +  +G
Sbjct:   375 IAVHGFNQMI-VTKEKQVDVGDSITVLNNGEQEEEGVHG 412

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2169464 FLA21 "AT5G06920" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 35/130 (26%), Positives = 54/130 (41%)

Query:    22 SPGTLSNAVETLSNSGYLSMALTLQITFKTLNLESKTLTIFSPXXXXXXXXXXXX----X 77
             SP    NA  TL  S + ++A  L I+ +     S   T+F+                  
Sbjct:    45 SPSLSLNASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLK 104

Query:    78 XXXXYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMF 137
                 YH  P  LS D L     G+ LPTLL + S+ ++  +  +    +N V I    MF
Sbjct:   105 QLLHYHTLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMF 164

Query:   138 DQEELVVYGI 147
               + LV++G+
Sbjct:   165 LGDSLVIHGV 174

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2126535 AT4G29980 "AT4G29980" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 0.00018, P = 0.00018
 Identities = 33/106 (31%), Positives = 50/106 (47%)

Query:    52 LNLESKTLTIFSPXXXXXXXXXXXXXXXXXYHISPSRLSQDSLKTLAFGSRLPTLLSNHS 111
             LN    T T+F P                 YHI P  L    +  +   SR+PTLLS HS
Sbjct:    63 LNGPVLTSTLFLPKTSVEGINATSPLVAS-YHIVPQWLDFSVISLMMPFSRIPTLLSGHS 121

Query:   112 LIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDEFFN-SSFG 156
             ++VT +  +    +++GVLI E  +F    +V++ +   FN S +G
Sbjct:   122 IVVTNNSASG--FTLDGVLISEPDLFVSPTIVIHRMAFPFNFSRYG 165

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037873 AT1G15190 "AT1G15190" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 0.00023, P = 0.00023
 Identities = 36/130 (27%), Positives = 59/130 (45%)

Query:    26 LSNAVETLSNSG---YLSMALTLQITFKTLNLESKTLTIFSPXXXXXXXXXXXXX----- 77
             L  A+  L   G   + +  +T  + F  L+ ES  LT+F+P                  
Sbjct:    35 LERAIAILRVRGRALFANAIITSDLLFDLLSDES--LTLFAPTDSMLFDLDMTHSLPFYV 92

Query:    78 XXXXYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMF 137
                  H  P RLS   L++L   S LPTLL +H L++T    +N  + ++GV +    +F
Sbjct:    93 STLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIPGLF 152

Query:   138 DQEELVVYGI 147
             D + + V+G+
Sbjct:   153 DGQHIAVHGL 162

GO:0003674 "molecular_function" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	340
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	1e-09
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	4e-08
smart00554	97	smart00554, FAS1, Four repeated domains in the Fas	1e-04
pfam02469	123	pfam02469, Fasciclin, Fasciclin domain	0.004

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 219 TIFAPVDAAME---PYVKNITD--CVSIFKQHVVLRLLRWQDLIRLDGGTTLPT-SSEGF 272
           T+FAP D A +   P + ++      ++   HVV   L   DL+    G TLPT +    
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLLN---GGTLPTLAGSKL 57

Query: 273 KITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           +IT +     + +NG  +V  D+ ++N  VVH +D +L
Sbjct: 58  RITRSGGSGTVTVNGARIVEADIAATN-GVVHVIDRVL 94

Length = 97

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 50.7 bits (122), Expect = 4e-08
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 13/104 (12%)

Query: 215 QTRLTIFAPVDAAMEPY--------VKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLP 266
           Q   T+FAP D A            +K+     ++ K HVV   L   DL     G TL 
Sbjct: 23  QGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKYHVVPGRLTSSDLKN---GGTLA 79

Query: 267 TSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           T  +G K+ V  +G  + +NG  VV  D+ ++N  V+H +D +L
Sbjct: 80  TL-QGSKLRVNVTGGTVTVNGARVVQSDIEATN-GVIHVIDKVL 121

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

>gnl|CDD|214719 smart00554, FAS1, Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 14/98 (14%)

Query: 60  TIFSPSDFSFSQ--SGQLSLSQ------LQYHISPSRLSQDSLKTLAFGSRLPTLLSNHS 111
           T+F+P+D +F +      SL        L YH+ P RLS   L     G  LPT L+   
Sbjct: 1   TVFAPTDEAFQKLPPDLNSLLADKLKNLLLYHVVPGRLSSADLLN---GGTLPT-LAGSK 56

Query: 112 LIVTVSDFNNAHLSINGVLIQESPMFDQEELVVYGIDE 149
           L +T S   +  +++NG  I E+ +      VV+ ID 
Sbjct: 57  LRITRSG-GSGTVTVNGARIVEADIA-ATNGVVHVIDR 92

Length = 97

>gnl|CDD|217054 pfam02469, Fasciclin, Fasciclin domain

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 25/102 (24%)

Query: 50  KTLNLESKTLTIFSPSDFSFSQSGQLSLSQ-----------LQYHISPSRLSQDSLKTLA 98
            TLN      T+F+P+D +F++    +L+            L+YH+ P RL+   LK   
Sbjct: 17  DTLNGSQGPFTVFAPTDEAFAKLPAGTLNFLLKDKEQLKNLLKYHVVPGRLTSSDLKN-- 74

Query: 99  FGSRLPTLLSNHSLIVTVSD----FNNAHLSI------NGVL 130
            G  L T L    L V V+      N A +        NGV+
Sbjct: 75  -GGTLAT-LQGSKLRVNVTGGTVTVNGARVVQSDIEATNGVI 114

This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	340
COG2335	187	Secreted and surface protein containing fasciclin-	99.85
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.79
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.73
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.73
COG2335	187	Secreted and surface protein containing fasciclin-	99.66
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.65
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	99.51
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.47

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.85  E-value=2.3e-22  Score=176.34  Aligned_cols=124  Identities=22%  Similarity=0.357  Sum_probs=101.2

Q ss_pred             ccchhccc-ccCchhhhHHHhhH-hhh-hccceeEEEeeecccccccccc----------cchhHHHHhhhhhHhhhhcc
Q 019462          187 GEASDLLN-SRGYTLMATFLDMQ-LAR-FTNQTRLTIFAPVDAAMEPYVK----------NITDCVSIFKQHVVLRLLRW  253 (340)
Q Consensus       187 ~~~~~~L~-~~g~~~~~~~L~~~-l~~-l~~~~~~TvFAPtD~Af~~~~~----------~~~~l~~iL~yHvVp~~~~~  253 (340)
                      .++++... ...|+++..++++. |-+ +.+.++||||||+|+||.+++.          +...|.++|.||||+|+++.
T Consensus        48 ~~iV~~a~~~~~f~tl~~a~~aa~Lv~~L~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~~  127 (187)
T COG2335          48 ADIVESAANNPSFTTLVAALKAAGLVDTLNETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKITA  127 (187)
T ss_pred             hHHHHHHccCcchHHHHHHHHhhhhHHHhcCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcccH
Confidence            35555554 44599999988653 544 5667899999999999999875          33457889999999999999


Q ss_pred             cceeeccCCccccCCCCCeEEEEEEeccEEEECCceeecccccccceEEeeecccccccCCCc
Q 019462          254 QDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPLD  316 (340)
Q Consensus       254 ~dL~~~~~g~~l~Tl~~g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL~~p~~~  316 (340)
                      +++..   .....|+ +|..++|...+++++||+++|+.+|+.. +|||||+||+|| +||..
T Consensus       128 ~~l~~---~~~v~t~-~G~~~~i~~~~~~~~Vn~a~v~~~di~a-~NgvIhvID~Vl-~Pp~~  184 (187)
T COG2335         128 ADLKS---SGSVKTV-QGADLKIKVTGGGVYVNDATVTIADINA-SNGVIHVIDKVL-IPPMD  184 (187)
T ss_pred             HHhhc---cccceee-cCceEEEEEcCCcEEEeeeEEEeccEec-cCcEEEEEeeec-cCCCc
Confidence            99864   3346777 6899999999889999999999999764 779999999999 99864

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.79  E-value=6e-20  Score=146.79  Aligned_cols=90  Identities=36%  Similarity=0.522  Sum_probs=77.9

Q ss_pred             EEeeeccccccccccc----c--h-hHHHHhhhhhHhhhhcccceeeccCCccccCCCCCeEEEEEEec--cEEEECCce
Q 019462          219 TIFAPVDAAMEPYVKN----I--T-DCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSG--DVILLNGVP  289 (340)
Q Consensus       219 TvFAPtD~Af~~~~~~----~--~-~l~~iL~yHvVp~~~~~~dL~~~~~g~~l~Tl~~g~~L~v~~~~--~~i~vn~a~  289 (340)
                      |+|||+|+||+++...    .  + .++++|+||++|++++.++|..   +..++|+. |..++++..+  +.+++|+++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl~-g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTLA-GSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccCC-CCEEEEEEeCCCCeEEEcceE
Confidence            8999999999997542    1  1 5789999999999999988864   66789985 8899999987  799999999


Q ss_pred             eecccccccceEEeeecccccccCC
Q 019462          290 VVFPDMYSSNWLVVHGLDSLLAVSP  314 (340)
Q Consensus       290 V~~~di~~~~~gvIH~Id~VL~~p~  314 (340)
                      |+.+|+.+ +||+||+||+|| +|+
T Consensus        77 v~~~di~~-~nGvih~Id~vL-~P~   99 (99)
T smart00554       77 IVEADIAA-TNGVVHVIDRVL-LPP   99 (99)
T ss_pred             EEECCEec-CCeEEEEECcee-CCC
Confidence            99999876 569999999999 886

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.73  E-value=1.6e-18  Score=144.30  Aligned_cols=112  Identities=28%  Similarity=0.404  Sum_probs=83.7

Q ss_pred             CchhhhHHHhh-Hhhh-h-ccceeEEEeeecccccccccc--------cchhHHHHhhhhhHhhhhcccceeeccCC-cc
Q 019462          197 GYTLMATFLDM-QLAR-F-TNQTRLTIFAPVDAAMEPYVK--------NITDCVSIFKQHVVLRLLRWQDLIRLDGG-TT  264 (340)
Q Consensus       197 g~~~~~~~L~~-~l~~-l-~~~~~~TvFAPtD~Af~~~~~--------~~~~l~~iL~yHvVp~~~~~~dL~~~~~g-~~  264 (340)
                      +|+.|..+++. .+.+ + ...+.+|||||+|+||+++..        ..+.++++|+||++++.+..++|..   + ..
T Consensus         2 ~~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~---~~~~   78 (128)
T PF02469_consen    2 DLSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRN---GKQT   78 (128)
T ss_dssp             TTHHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHC---HHEE
T ss_pred             CHHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhcc---cccc
Confidence            45666766643 3333 4 345789999999999988732        2345789999999999998888753   4 56


Q ss_pred             ccCCCCCeEEEEEEe--ccEEEECC-ceeecccccccceEEeeecccccccC
Q 019462          265 LPTSSEGFKITVAYS--GDVILLNG-VPVVFPDMYSSNWLVVHGLDSLLAVS  313 (340)
Q Consensus       265 l~Tl~~g~~L~v~~~--~~~i~vn~-a~V~~~di~~~~~gvIH~Id~VL~~p  313 (340)
                      ++|...|..+.|+..  ++.+.||+ ++|+.+|+.+ +||+||+||+|| +|
T Consensus        79 ~~t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~~-~nG~ih~id~vL-~P  128 (128)
T PF02469_consen   79 LETLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIEA-SNGVIHIIDDVL-IP  128 (128)
T ss_dssp             EEBSSTTCEEEEEEEGGTTEEEECCEEEESEEEEEE-SSEEEEEESS-T-SS
T ss_pred             ceeccCCCEEEEEEEecCCceEecCceEEEeCCEEe-CCEEEEEECceE-Cc
Confidence            888557899999988  67999999 9999999865 679999999999 87

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.73  E-value=6.7e-18  Score=173.67  Aligned_cols=219  Identities=21%  Similarity=0.179  Sum_probs=140.7

Q ss_pred             ccceeEEeecCCCcccccccc-cc----ccceeeecCCCccCccccchhhccC-CccccccCceEEEEEcc----CCcce
Q 019462           54 LESKTLTIFSPSDFSFSQSGQ-LS----LSQLQYHISPSRLSQDSLKTLAFGS-RLPTLLSNHSLIVTVSD----FNNAH  123 (340)
Q Consensus        54 l~~~~~TVFAPtd~AF~~~~~-~~----l~lL~yHvvp~~~~~~~L~~l~~g~-~l~Tl~~g~~l~vt~~~----~~~~~  123 (340)
                      .+.+..|+|+|+|+||.+... ..    ..+|+||+++.+...++..+   |+ .++|+ .|..+..-...    .+...
T Consensus       402 ~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~---~~~~v~t~-g~~~l~~fv~r~~~s~~~t~  477 (682)
T KOG1437|consen  402 APNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYN---GQTTVRTL-GKNKLLYFVYRHSVSANVTD  477 (682)
T ss_pred             cCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhc---ccceeecc-CCeEEEEEEeccccccccee
Confidence            344459999999999998532 11    28999999999999998875   44 56666 45555544443    11123


Q ss_pred             eeeee-eEeecCCCC-CccceEEeeehhhccccceeeecCCCCCCCCCCCCCCCCccccccccccccchhccccc-Cchh
Q 019462          124 LSING-VLIQESPMF-DQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSR-GYTL  200 (340)
Q Consensus       124 v~vn~-a~I~~~di~-~ng~~vVH~Id~VL~P~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~  200 (340)
                      +.++| ++|+..|+. .||  +||.||+|+.|. ...+                                .|++. .++.
T Consensus       478 i~~~~~~~Ii~aDi~~~nG--vvH~id~vl~p~-~l~~--------------------------------~l~~d~r~s~  522 (682)
T KOG1437|consen  478 ILIGNEACIIEADISVKNG--VVHIIDRVLDPV-SLME--------------------------------DLKTDGRISG  522 (682)
T ss_pred             eeccceeeEEecccceecC--ceEEeeEEcCcc-cHHH--------------------------------HHhhccchhh
Confidence            55554 678899985 778  999999999992 2111                                12211 1333


Q ss_pred             hhHHHhhH-h-hhhccceeEEEeeecccccccccccc------hhHHHHhhhhhHhhhhc--ccceeeccCCccccCCCC
Q 019462          201 MATFLDMQ-L-ARFTNQTRLTIFAPVDAAMEPYVKNI------TDCVSIFKQHVVLRLLR--WQDLIRLDGGTTLPTSSE  270 (340)
Q Consensus       201 ~~~~L~~~-l-~~l~~~~~~TvFAPtD~Af~~~~~~~------~~l~~iL~yHvVp~~~~--~~dL~~~~~g~~l~Tl~~  270 (340)
                      +..+++.. + .++...+.||+|+|||+||++...+.      ..+.++++||++++...  ..+......+ ..-+. .
T Consensus       523 ~~~~le~~~l~e~l~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~ls~~~~~~v~~~-~k~s~-~  600 (682)
T KOG1437|consen  523 TVQGLEGVLLPEELTPEGNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSRLSLGSSPYVMIQ-VKLSL-R  600 (682)
T ss_pred             hHHhhhhcCChhhhccCCceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceeeeecccccceeee-eeEEE-e
Confidence            34444332 2 33445678999999999999865432      45789999999997653  1111000000 11111 2


Q ss_pred             CeEEEEEEeccEEEECCceeecccccccceEEeeecccccccCCC
Q 019462          271 GFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPL  315 (340)
Q Consensus       271 g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL~~p~~  315 (340)
                      |.++-+....+...+|-.+++..|++. .||++|.||.|| .|++
T Consensus       601 ~~~~~~~~~~~~~~vn~e~~~~~~i~~-~n~~~h~i~~vl-~p~~  643 (682)
T KOG1437|consen  601 GDHLFFSLVNPRGDVNKERLVGIDIMG-TNGVVHVIDLVL-KPPD  643 (682)
T ss_pred             cccEEeeeeccccceeeeeeeccceee-ecceeEEEEEEc-ccCc
Confidence            344444444456666778899999864 678999999999 7763

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=6.6e-17  Score=142.07  Aligned_cols=92  Identities=20%  Similarity=0.362  Sum_probs=77.9

Q ss_pred             ccceeEEeecCCCcccccccc--------cc----c-cceeeecCCCccCccccchhhccCCccccccCceEEEEEccCC
Q 019462           54 LESKTLTIFSPSDFSFSQSGQ--------LS----L-SQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFN  120 (340)
Q Consensus        54 l~~~~~TVFAPtd~AF~~~~~--------~~----l-~lL~yHvvp~~~~~~~L~~l~~g~~l~Tl~~g~~l~vt~~~~~  120 (340)
                      .+.|+||||||+|+||.+++.        |.    + ++|.||+++|+++.+++..   ...+.|+ +|..++|...+  
T Consensus        77 ~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk~~~~~l~~---~~~v~t~-~G~~~~i~~~~--  150 (187)
T COG2335          77 NETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGKITAADLKS---SGSVKTV-QGADLKIKVTG--  150 (187)
T ss_pred             cCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCcccHHHhhc---cccceee-cCceEEEEEcC--
Confidence            346899999999999999863        11    1 8999999999999999985   3346665 89999999876  


Q ss_pred             cceeeeeeeEeecCCCC-CccceEEeeehhhcccc
Q 019462          121 NAHLSINGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus       121 ~~~v~vn~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                       ++++||+++++..|+. +||  +||.||+||.||
T Consensus       151 -~~~~Vn~a~v~~~di~a~Ng--vIhvID~Vl~Pp  182 (187)
T COG2335         151 -GGVYVNDATVTIADINASNG--VIHVIDKVLIPP  182 (187)
T ss_pred             -CcEEEeeeEEEeccEeccCc--EEEEEeeeccCC
Confidence             4599999999999985 777  999999999998

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.65  E-value=5.6e-17  Score=129.53  Aligned_cols=88  Identities=35%  Similarity=0.522  Sum_probs=73.9

Q ss_pred             EeecCCCccccccccc---------cc-cceeeecCCCccCccccchhhccCCccccccCceEEEEEccCCcceeeeeee
Q 019462           60 TIFSPSDFSFSQSGQL---------SL-SQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGV  129 (340)
Q Consensus        60 TVFAPtd~AF~~~~~~---------~l-~lL~yHvvp~~~~~~~L~~l~~g~~l~Tl~~g~~l~vt~~~~~~~~v~vn~a  129 (340)
                      |||||+|+||++++..         .+ ++|+||+++++++.++|..   +..++|+ .|..++++..+ ..+.+++|++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl-~g~~l~v~~~~-~~~~i~in~~   75 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTL-AGSKLRVTRSG-DSGTVTVNGA   75 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccC-CCCEEEEEEeC-CCCeEEEcce
Confidence            8999999999987531         22 8999999999999999875   6678887 58999999875 1268999999


Q ss_pred             EeecCCCC-CccceEEeeehhhcccc
Q 019462          130 LIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus       130 ~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      +|+.+|+. .||  +||+||+||.|+
T Consensus        76 ~v~~~di~~~nG--vih~Id~vL~P~   99 (99)
T smart00554       76 RIVEADIAATNG--VVHVIDRVLLPP   99 (99)
T ss_pred             EEEECCEecCCe--EEEEECceeCCC
Confidence            99999996 555  999999999985

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.51  E-value=6.3e-14  Score=144.59  Aligned_cols=220  Identities=16%  Similarity=0.184  Sum_probs=135.6

Q ss_pred             eeEEeecCCCccccccccccc-cceeeecCCCccCccccch-hhccCCccc---cccCceEEEEEccCCcceeeeeeeEe
Q 019462           57 KTLTIFSPSDFSFSQSGQLSL-SQLQYHISPSRLSQDSLKT-LAFGSRLPT---LLSNHSLIVTVSDFNNAHLSINGVLI  131 (340)
Q Consensus        57 ~~~TVFAPtd~AF~~~~~~~l-~lL~yHvvp~~~~~~~L~~-l~~g~~l~T---l~~g~~l~vt~~~~~~~~v~vn~a~I  131 (340)
                      ++.|.+||+|.||.+.+.... .++.||.+.|.+......+ +.-|..++-   -..|+...+..+. .+....+||..+
T Consensus       271 d~rt~~a~tn~a~~~ip~~~~~~~~~~~~v~~~~~~~~i~~~~~~~~s~~~~~~r~~~~~~~~a~g~-~g~~~~~ng~~~  349 (682)
T KOG1437|consen  271 DPRTHLAPTNEAFFTIPRGYPPRILGYHLVLGNLKYNHILDNMKLGPSLAPGTVRLTGEGVAIAPGS-SGERYHINGRAI  349 (682)
T ss_pred             ccccccccCcchhhcccccCCCcccccccchhhhhhhhhcccccccccccccceeeccccccccccC-CCceEEeeccee
Confidence            579999999999987654332 5677888887765444332 111111110   0112222222222 234677888766


Q ss_pred             ecCCCCCccceEEeeehhhccccceeeecCCCCCCCCCCCCCCCCccccccccccccchhcccccCchhhhHHHhh-Hh-
Q 019462          132 QESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNSRGYTLMATFLDM-QL-  209 (340)
Q Consensus       132 ~~~di~~ng~~vVH~Id~VL~P~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~L~~-~l-  209 (340)
                      +..|...++ +++|.||.++.|+...                              +.+++.+....+++...+.. .+ 
T Consensus       350 I~kd~i~~~-~~lh~id~~l~p~~~~------------------------------~l~~La~e~~~st~~rlv~elgll  398 (682)
T KOG1437|consen  350 IQKDFIHTN-GLLHYIDYVLEPDSLK------------------------------NLMSLAREDEISTSMRLVAELGLL  398 (682)
T ss_pred             EEEeeeccc-eEEEEcccccCCchHH------------------------------HHHHHHhcccccHHHHHHHhccce
Confidence            657776442 3899999999997321                              23334444344444444422 22 


Q ss_pred             hhhccceeEEEeeecccccccccccc--hhHHHHhhhhhHhhhhcccceeeccCCccccCCCCCeEEEEEEecc------
Q 019462          210 ARFTNQTRLTIFAPVDAAMEPYVKNI--TDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGD------  281 (340)
Q Consensus       210 ~~l~~~~~~TvFAPtD~Af~~~~~~~--~~l~~iL~yHvVp~~~~~~dL~~~~~g~~l~Tl~~g~~L~v~~~~~------  281 (340)
                      .-+...+.+|+|+|+|+||+......  ...+.||+||++|.++..++..+  .++.++|+ +|..+..-...+      
T Consensus       399 ~~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~--~~~~v~t~-g~~~l~~fv~r~~~s~~~  475 (682)
T KOG1437|consen  399 TALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYN--GQTTVRTL-GKNKLLYFVYRHSVSANV  475 (682)
T ss_pred             EEEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhc--ccceeecc-CCeEEEEEEecccccccc
Confidence            22444445999999999999865421  22578999999999988877653  23378887 455554433321      


Q ss_pred             -EEEECC-ceeecccccccceEEeeecccccccC
Q 019462          282 -VILLNG-VPVVFPDMYSSNWLVVHGLDSLLAVS  313 (340)
Q Consensus       282 -~i~vn~-a~V~~~di~~~~~gvIH~Id~VL~~p  313 (340)
                       .+.++| +.|...|+.. ++|+||.||+|| .|
T Consensus       476 t~i~~~~~~~Ii~aDi~~-~nGvvH~id~vl-~p  507 (682)
T KOG1437|consen  476 TDILIGNEACIIEADISV-KNGVVHIIDRVL-DP  507 (682)
T ss_pred             eeeeccceeeEEecccce-ecCceEEeeEEc-Cc
Confidence             455655 5688999865 679999999999 76

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.47  E-value=6.4e-15  Score=122.56  Aligned_cols=92  Identities=32%  Similarity=0.467  Sum_probs=70.6

Q ss_pred             eeEEeecCCCccccccccc----------cc-cceeeecCCCccCccccchhhccCCccccccCceEEEEEccCCcceee
Q 019462           57 KTLTIFSPSDFSFSQSGQL----------SL-SQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLS  125 (340)
Q Consensus        57 ~~~TVFAPtd~AF~~~~~~----------~l-~lL~yHvvp~~~~~~~L~~l~~g~~l~Tl~~g~~l~vt~~~~~~~~v~  125 (340)
                      +.+|||||+|+||.+++..          .+ ++|+||++++.++.++++..  ...+.|.+.|..+.|+... .++.++
T Consensus        24 ~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~~~~~t~~~g~~~~v~~~~-~~~~~~  100 (128)
T PF02469_consen   24 GNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--KQTLETLLNGQPLRVSSSP-SNGTIY  100 (128)
T ss_dssp             SSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--HEEEEBSSTTCEEEEEEEG-GTTEEE
T ss_pred             CCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--cccceeccCCCEEEEEEEe-cCCceE
Confidence            5899999999999876411          12 89999999999999998752  1568886689999999872 257899


Q ss_pred             eee-eEeecCCCC-CccceEEeeehhhccc
Q 019462          126 ING-VLIQESPMF-DQEELVVYGIDEFFNS  153 (340)
Q Consensus       126 vn~-a~I~~~di~-~ng~~vVH~Id~VL~P  153 (340)
                      +|+ ++|+..|+. .||  +||+||+||.|
T Consensus       101 v~~~a~i~~~~~~~~nG--~ih~id~vL~P  128 (128)
T PF02469_consen  101 VNGKARIVKSDIEASNG--VIHIIDDVLIP  128 (128)
T ss_dssp             ECCEEEESEEEEEESSE--EEEEESS-TSS
T ss_pred             ecCceEEEeCCEEeCCE--EEEEECceECc
Confidence            999 999988985 666  99999999988

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	340
2vxp_A	132	Transforming growth factor-beta-induced protein IG	5e-09
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	3e-08
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	8e-07
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	3e-06

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A Length = 132

 Score = 53.1 bits (128), Expect = 5e-09
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 13/101 (12%)

Query: 218 LTIFAPVDAA--------MEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSS 269
            T+FAP + A            + +  +  +I K H+   +L    +        L +  
Sbjct: 36  YTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI---GALVRLKSL- 91

Query: 270 EGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           +G K+ V+   +V+ +N  PV  PD+ ++N  VVH + ++L
Sbjct: 92  QGDKLEVSLKNNVVSVNKEPVAEPDIMATNG-VVHVITNVL 131

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1 Length = 324

 Score = 53.4 bits (128), Expect = 3e-08
 Identities = 51/325 (15%), Positives = 102/325 (31%), Gaps = 69/325 (21%)

Query: 26  LSNAVETLSNSGYLSMALTLQIT----FKTLNLESKTLTIFSPSDFSFSQSGQLSLSQ-- 79
           L +  E   N         +          +N     +TI +PS+ +++ S   ++ +  
Sbjct: 12  LQSFKENAENGALRKFYEVIMDNGGAVLDDIN-SLTEVTILAPSNEAWNSSNINNVLRDR 70

Query: 80  ------LQYHISPSRLSQDSLKT--LAFGSRLPTLLSNHSLIVTVS-DFNNAHLSINGVL 130
                 L  HI   RL+ D ++       +++PT+ +N  L   V  + ++  +++ G  
Sbjct: 71  NKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGG 130

Query: 131 IQ---ESPMFDQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFG 187
           +          Q    V+ ID                           +      V    
Sbjct: 131 VNATVIQADVAQTNGYVHIID-------------------------HVLGVPYTTVLGKL 165

Query: 188 EASDLLNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCV-------- 239
           E+  +++        +  + QL     Q R T F P D   +    +             
Sbjct: 166 ESDPMMSDTYKMGKFSHFNDQLN--NTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADF 223

Query: 240 -----SIFKQHVV-----LRLLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILL---- 285
                SI ++H+        +       +  G   LPT  +   I V       ++    
Sbjct: 224 SYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNY 283

Query: 286 NGVPVVFPDMYSSNWLVVHGLDSLL 310
             + V  PD+  +N  ++H +D  L
Sbjct: 284 KKINVYRPDVECTNG-IIHVIDYPL 307

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1 Length = 163

 Score = 47.4 bits (113), Expect = 8e-07
 Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 15/101 (14%)

Query: 218 LTIFAPVDAA--------MEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSS 269
            T+FAP +AA        ++    N +   SI   HVV       +++      TL    
Sbjct: 66  YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVV--GTRQTL---- 119

Query: 270 EGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           +G  +TV   G+ + +    VV   + ++N   V+ +DS+L
Sbjct: 120 QGASVTVTGQGNSLKVGNADVVCGGVSTAN-ATVYMIDSVL 159

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A Length = 137

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 16/109 (14%)

Query: 212 FTNQTRLTIFAPVDAA--------MEPYVK--NITDCVSIFKQHVVLRLLRWQDLIRLDG 261
                  T+FAP DAA        +E  +K  N      I   HVV   +   DL     
Sbjct: 31  LKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLT---E 87

Query: 262 GTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           G T  T  EG  +TV   G    +NGV +  PD+ +SN  V+H +D +L
Sbjct: 88  GMTAET-VEGGALTVTLEGGPK-VNGVSISQPDVDASN-GVIHVIDGVL 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	340
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	100.0
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.9
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.89
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.88
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.75
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.7
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.69
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.68

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=100.00  E-value=5.2e-38  Score=301.23  Aligned_cols=229  Identities=20%  Similarity=0.290  Sum_probs=165.3

Q ss_pred             ceeEEeecCCCccccccccc-------cc-cceeeecCCCccCccccchhhcc-C-CccccccCceEEEEEccC-Cccee
Q 019462           56 SKTLTIFSPSDFSFSQSGQL-------SL-SQLQYHISPSRLSQDSLKTLAFG-S-RLPTLLSNHSLIVTVSDF-NNAHL  124 (340)
Q Consensus        56 ~~~~TVFAPtd~AF~~~~~~-------~l-~lL~yHvvp~~~~~~~L~~l~~g-~-~l~Tl~~g~~l~vt~~~~-~~~~v  124 (340)
                      .+++|||||+|+||.+....       .+ ++|+||+++++++.++|.....+ . .++|+..+..++++..+. +++.+
T Consensus        45 ~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v  124 (324)
T 1o70_A           45 LTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVI  124 (324)
T ss_dssp             CSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEE
T ss_pred             CCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEE
Confidence            47999999999999875321       12 89999999999999998864321 1 577875433467765531 13468


Q ss_pred             eeee----eEeecCCCC-CccceEEeeehhhccccceeeecCCCCCCCCCCCCCCCCccccccccccccchhcccc-cCc
Q 019462          125 SING----VLIQESPMF-DQEELVVYGIDEFFNSSFGVMISPPPHSAPVPSPVPSPIEPIGFDVDVFGEASDLLNS-RGY  198 (340)
Q Consensus       125 ~vn~----a~I~~~di~-~ng~~vVH~Id~VL~P~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~L~~-~g~  198 (340)
                      ++++    ++|+.+|+. .||  +||+||+||.|+..                               ++.+.++. ..|
T Consensus       125 ~v~~g~~~a~v~~~di~~~NG--vIhvID~VL~pp~~-------------------------------ti~~~l~~~~~f  171 (324)
T 1o70_A          125 TVEGGGVNATVIQADVAQTNG--YVHIIDHVLGVPYT-------------------------------TVLGKLESDPMM  171 (324)
T ss_dssp             EEEETTEEEEEEEEEEECSSE--EEEEESSCTTSCCS-------------------------------CHHHHHHHCGGG
T ss_pred             EEcCCceeEEEEeccccccCc--EEEEEchhhhhchh-------------------------------hHHHHhhcCchH
Confidence            8885    899999984 777  99999999999721                               23445554 458


Q ss_pred             hhhhHHHhh-Hhhh-hc-cceeEEEeeeccccccccc----c--------cc-hhHHHHhhhhhHhh--hhcccceeecc
Q 019462          199 TLMATFLDM-QLAR-FT-NQTRLTIFAPVDAAMEPYV----K--------NI-TDCVSIFKQHVVLR--LLRWQDLIRLD  260 (340)
Q Consensus       199 ~~~~~~L~~-~l~~-l~-~~~~~TvFAPtD~Af~~~~----~--------~~-~~l~~iL~yHvVp~--~~~~~dL~~~~  260 (340)
                      ++|..+++. .+.+ +. ..++||||||+|+||+++.    .        +. +.++++|+|||||+  .++.++|.+..
T Consensus       172 s~~~~~l~~~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~  251 (324)
T 1o70_A          172 SDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFS  251 (324)
T ss_dssp             HHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHH
T ss_pred             HHHHHHHHhhCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhc
Confidence            888887754 3433 43 3579999999999999973    1        11 36889999999998  67778886432


Q ss_pred             C--C-ccccCCCCCeEEEEEE--eccEEEEC----CceeecccccccceEEeeecccccccCCCcccccc
Q 019462          261 G--G-TTLPTSSEGFKITVAY--SGDVILLN----GVPVVFPDMYSSNWLVVHGLDSLLAVSPLDEKIIG  321 (340)
Q Consensus       261 ~--g-~~l~Tl~~g~~L~v~~--~~~~i~vn----~a~V~~~di~~~~~gvIH~Id~VL~~p~~~~~~~~  321 (340)
                      .  + ..++|+.  ..+.|+.  .++.++||    +++|+.+|+.+ .|||||+||+|| +|+......|
T Consensus       252 ~~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~-~NGvIHvID~VL-~P~~~~~~~g  317 (324)
T 1o70_A          252 QESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPL-LEEKDVVVAG  317 (324)
T ss_dssp             HHSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEEEEEEEE-TTEEEEEESSCS-CCTTTTC---
T ss_pred             cCCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEEEccccc-CCCeEEEeceee-cCCcccccCC
Confidence            1  1 1378885  5677765  46788887    78999999875 668999999999 9987654333

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.90  E-value=6.9e-25  Score=185.34  Aligned_cols=121  Identities=28%  Similarity=0.368  Sum_probs=99.5

Q ss_pred             cchhcccc-cCchhhhHHHhh-Hhhh-hccceeEEEeeecccccccccc----------cchhHHHHhhhhhHhhhhccc
Q 019462          188 EASDLLNS-RGYTLMATFLDM-QLAR-FTNQTRLTIFAPVDAAMEPYVK----------NITDCVSIFKQHVVLRLLRWQ  254 (340)
Q Consensus       188 ~~~~~L~~-~g~~~~~~~L~~-~l~~-l~~~~~~TvFAPtD~Af~~~~~----------~~~~l~~iL~yHvVp~~~~~~  254 (340)
                      ++.+.|+. .+|++|..+++. .+.+ +.+.+++|||||+|+||++++.          +.+.++++|+|||||+++..+
T Consensus         4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~   83 (137)
T 1w7d_A            4 DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSS   83 (137)
T ss_dssp             TTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTT
T ss_pred             CHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHH
Confidence            56777764 569999998865 3433 5566799999999999999854          345578999999999999888


Q ss_pred             ceeeccCCccccCCCCCeEEEEEEeccEEEECCceeecccccccceEEeeecccccccCCC
Q 019462          255 DLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPL  315 (340)
Q Consensus       255 dL~~~~~g~~l~Tl~~g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL~~p~~  315 (340)
                      +|.   .|..++|+ .|..|.|+..+| ++|||++|+.+|+.+ +|||||+||+|| +|+.
T Consensus        84 ~l~---~~~~~~tl-~G~~l~v~~~~g-v~vn~a~v~~~di~~-~NGvIHvID~VL-~P~s  137 (137)
T 1w7d_A           84 DLT---EGMTAETV-EGGALTVTLEGG-PKVNGVSISQPDVDA-SNGVIHVIDGVL-MPGA  137 (137)
T ss_dssp             TSC---SSEEEECT-TSCEEEEECTTS-CEETTEECSBCCCBC-SSSEEEBCSSCC-SSCC
T ss_pred             Hhc---CCCeeecc-CCceEEEEecCC-EEEeCcEEEECCeec-CCeEEEEECeee-CCCC
Confidence            875   36678888 588999999888 999999999999875 678999999999 8873

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.89  E-value=7.7e-24  Score=177.81  Aligned_cols=118  Identities=22%  Similarity=0.351  Sum_probs=96.9

Q ss_pred             cchhcccc-cCchhhhHHHhh-Hhh-hhccceeEEEeeecccccccccc--------cchhHHHHhhhhhHhhhhcccce
Q 019462          188 EASDLLNS-RGYTLMATFLDM-QLA-RFTNQTRLTIFAPVDAAMEPYVK--------NITDCVSIFKQHVVLRLLRWQDL  256 (340)
Q Consensus       188 ~~~~~L~~-~g~~~~~~~L~~-~l~-~l~~~~~~TvFAPtD~Af~~~~~--------~~~~l~~iL~yHvVp~~~~~~dL  256 (340)
                      ++++.|+. .+|++|..+++. .+. .+.+.++||||||+|+||++++.        +.+.++++|+|||+|+.+..+++
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l   82 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI   82 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence            46677775 569999999865 343 35567899999999999999864        34568899999999998877776


Q ss_pred             eeccCCccccCCCCCeEEEEEEeccEEEECCceeecccccccceEEeeeccccc
Q 019462          257 IRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL  310 (340)
Q Consensus       257 ~~~~~g~~l~Tl~~g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL  310 (340)
                      .   .+..++|+ .|..|.|+..++.++||+++|+.+|+.+ +|||||+||+||
T Consensus        83 ~---~~~~~~tl-~G~~l~v~~~~~~v~vn~a~v~~~di~a-~NGvIHvID~VL  131 (132)
T 2vxp_A           83 G---ALVRLKSL-QGDKLEVSLKNNVVSVNKEPVAEPDIMA-TNGVVHVITNVL  131 (132)
T ss_dssp             S---SCEEEEBT-TSSEEEEEEETTEEEESSCBEEEEEEEE-TTEEEEEESSCC
T ss_pred             c---CCceEecC-CCCEEEEEEeCCEEEEeccEEEEcceec-CCEEEEEECcEe
Confidence            4   35678888 5889999999999999999999999875 679999999998

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.88  E-value=2.5e-23  Score=180.99  Aligned_cols=120  Identities=24%  Similarity=0.283  Sum_probs=100.1

Q ss_pred             cccchhcccc-cCchhhhHHHh-----h-Hh-hhhccceeEEEeeecccccccccc--------cchhHHHHhhhhhHhh
Q 019462          186 FGEASDLLNS-RGYTLMATFLD-----M-QL-ARFTNQTRLTIFAPVDAAMEPYVK--------NITDCVSIFKQHVVLR  249 (340)
Q Consensus       186 ~~~~~~~L~~-~g~~~~~~~L~-----~-~l-~~l~~~~~~TvFAPtD~Af~~~~~--------~~~~l~~iL~yHvVp~  249 (340)
                      ..++.+.|++ .+|++|..+|+     . .+ ..|...+ +|||||+|+||++++.        +.+.++++|+||||++
T Consensus        27 ~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g  105 (163)
T 1nyo_A           27 QDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAG  105 (163)
T ss_dssp             HSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEES
T ss_pred             CcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECC
Confidence            4577888875 45999999998     5 23 3355566 9999999999999864        2356889999999999


Q ss_pred             hhcccceeeccCCccccCCCCCeEEEEEEeccEEEECCceeecccccccceEEeeecccccccCC
Q 019462          250 LLRWQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSP  314 (340)
Q Consensus       250 ~~~~~dL~~~~~g~~l~Tl~~g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL~~p~  314 (340)
                      ++..++|.    | .++|+ .|..|+|+..++.++||+++|+.+|+.+ .|||||+||+|| +|+
T Consensus       106 ~~~~~~l~----g-~~~Tl-~G~~l~v~~~~~~v~vn~a~V~~~di~a-~NGvIHvID~VL-~P~  162 (163)
T 1nyo_A          106 QTSPANVV----G-TRQTL-QGASVTVTGQGNSLKVGNADVVCGGVST-ANATVYMIDSVL-MPP  162 (163)
T ss_dssp             CCCTTTSC----E-EEECT-TSSEEEEEECSSCEEETTEECSSBCCCC-SSEEEBCBSSCC-CCC
T ss_pred             EEcHHHhC----C-ccccC-CCCEEEEEEECCEEEEeccEEEECceEc-CCEEEEEECcEe-CCC
Confidence            99998885    3 58888 5889999999889999999999999875 679999999999 886

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.75  E-value=4.7e-20  Score=155.58  Aligned_cols=117  Identities=24%  Similarity=0.371  Sum_probs=87.8

Q ss_pred             hhhhhccccc-ceeeEEEEEEEeeeeec-cceeEEeecCCCccccccccc---------c---c-cceeeecCCCccCcc
Q 019462           28 NAVETLSNSG-YLSMALTLQITFKTLNL-ESKTLTIFSPSDFSFSQSGQL---------S---L-SQLQYHISPSRLSQD   92 (340)
Q Consensus        28 n~~~~L~~~g-~~~~a~~l~~~~~~~~l-~~~~~TVFAPtd~AF~~~~~~---------~---l-~lL~yHvvp~~~~~~   92 (340)
                      ++.++|++.+ |..++.+++.++....+ ..+++|||||+|+||.+++..         +   + ++|+||+++++++.+
T Consensus         4 ~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~   83 (137)
T 1w7d_A            4 DIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSS   83 (137)
T ss_dssp             TTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTT
T ss_pred             CHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHH
Confidence            4456676544 44444444433222223 347999999999999987521         1   2 799999999999999


Q ss_pred             ccchhhccCCccccccCceEEEEEccCCcceeeeeeeEeecCCCC-CccceEEeeehhhcccc
Q 019462           93 SLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus        93 ~L~~l~~g~~l~Tl~~g~~l~vt~~~~~~~~v~vn~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      +|..   |..+.|+ .|+.++|+..+   + +++|+++|+.+|+. .||  +||+||+||.|+
T Consensus        84 ~l~~---~~~~~tl-~G~~l~v~~~~---g-v~vn~a~v~~~di~~~NG--vIHvID~VL~P~  136 (137)
T 1w7d_A           84 DLTE---GMTAETV-EGGALTVTLEG---G-PKVNGVSISQPDVDASNG--VIHVIDGVLMPG  136 (137)
T ss_dssp             TSCS---SEEEECT-TSCEEEEECTT---S-CEETTEECSBCCCBCSSS--EEEBCSSCCSSC
T ss_pred             HhcC---CCeeecc-CCceEEEEecC---C-EEEeCcEEEECCeecCCe--EEEEECeeeCCC
Confidence            9874   5567776 78999998764   5 99999999999995 777  999999999997

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.70  E-value=4.7e-18  Score=162.50  Aligned_cols=119  Identities=18%  Similarity=0.241  Sum_probs=89.7

Q ss_pred             ccCchhhhHHHhhH---hhh-hccceeEEEeeeccccccccc-----ccchhHHHHhhhhhHhhhhcccceeeccC-C-c
Q 019462          195 SRGYTLMATFLDMQ---LAR-FTNQTRLTIFAPVDAAMEPYV-----KNITDCVSIFKQHVVLRLLRWQDLIRLDG-G-T  263 (340)
Q Consensus       195 ~~g~~~~~~~L~~~---l~~-l~~~~~~TvFAPtD~Af~~~~-----~~~~~l~~iL~yHvVp~~~~~~dL~~~~~-g-~  263 (340)
                      ...|++|..+|+..   +.+ +.+.++||||||+|+||+++.     .+.+.++++|+|||+++++..++|..... | .
T Consensus        21 ~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~  100 (324)
T 1o70_A           21 NGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIA  100 (324)
T ss_dssp             HHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCC
T ss_pred             CCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCce
Confidence            34599999888543   533 556789999999999998753     24466889999999999998888865432 1 1


Q ss_pred             cccCCCCCeEEEEEEec----cEEEECC----ceeecccccccceEEeeecccccccCCC
Q 019462          264 TLPTSSEGFKITVAYSG----DVILLNG----VPVVFPDMYSSNWLVVHGLDSLLAVSPL  315 (340)
Q Consensus       264 ~l~Tl~~g~~L~v~~~~----~~i~vn~----a~V~~~di~~~~~gvIH~Id~VL~~p~~  315 (340)
                      .++|+.++..+.++..+    +.+.+||    ++|+.+|+.+ +|||||+||+|| .||.
T Consensus       101 ~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL-~pp~  158 (324)
T 1o70_A          101 QVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVL-GVPY  158 (324)
T ss_dssp             CEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCT-TSCC
T ss_pred             EEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhh-hhch
Confidence            67888644336666542    3689985    8999999875 679999999999 8765

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.69  E-value=6.5e-19  Score=153.04  Aligned_cols=116  Identities=22%  Similarity=0.273  Sum_probs=88.6

Q ss_pred             hhhhhhccccc-ceeeEEEEE-----EEeeeeecc-ceeEEeecCCCccccccccc----------cc-cceeeecCCCc
Q 019462           27 SNAVETLSNSG-YLSMALTLQ-----ITFKTLNLE-SKTLTIFSPSDFSFSQSGQL----------SL-SQLQYHISPSR   88 (340)
Q Consensus        27 ~n~~~~L~~~g-~~~~a~~l~-----~~~~~~~l~-~~~~TVFAPtd~AF~~~~~~----------~l-~lL~yHvvp~~   88 (340)
                      .++.++|++.+ |..++.+++     .+.....+. .+ +|||||+|+||.+++..          .+ ++|+||+++++
T Consensus        28 ~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~  106 (163)
T 1nyo_A           28 DPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ  106 (163)
T ss_dssp             SCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred             cCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCE
Confidence            56778888655 544555555     332222333 45 99999999999987521          12 79999999999


Q ss_pred             cCccccchhhccCCccccccCceEEEEEccCCcceeeeeeeEeecCCCC-CccceEEeeehhhcccc
Q 019462           89 LSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus        89 ~~~~~L~~l~~g~~l~Tl~~g~~l~vt~~~~~~~~v~vn~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      ++.++|.    | .++|+ .|+.|+|+..+   +.+++|+++|+.+|+. .||  +||+||+||.|+
T Consensus       107 ~~~~~l~----g-~~~Tl-~G~~l~v~~~~---~~v~vn~a~V~~~di~a~NG--vIHvID~VL~P~  162 (163)
T 1nyo_A          107 TSPANVV----G-TRQTL-QGASVTVTGQG---NSLKVGNADVVCGGVSTANA--TVYMIDSVLMPP  162 (163)
T ss_dssp             CCTTTSC----E-EEECT-TSSEEEEEECS---SCEEETTEECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred             EcHHHhC----C-ccccC-CCCEEEEEEEC---CEEEEeccEEEECceEcCCE--EEEEECcEeCCC
Confidence            9999986    3 57776 68999999864   6799999999999996 677  999999999997

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.68  E-value=4.8e-19  Score=148.48  Aligned_cols=116  Identities=22%  Similarity=0.318  Sum_probs=83.3

Q ss_pred             hhhhhccccc-ceeeEEEEEEEeeeeec-cceeEEeecCCCccccccccc-------c---c-cceeeecCCCccCcccc
Q 019462           28 NAVETLSNSG-YLSMALTLQITFKTLNL-ESKTLTIFSPSDFSFSQSGQL-------S---L-SQLQYHISPSRLSQDSL   94 (340)
Q Consensus        28 n~~~~L~~~g-~~~~a~~l~~~~~~~~l-~~~~~TVFAPtd~AF~~~~~~-------~---l-~lL~yHvvp~~~~~~~L   94 (340)
                      ++.++|++.+ |..++..++.++....+ ..+++|||||+|+||++++..       +   + ++|+||++++.+..+++
T Consensus         3 ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l   82 (132)
T 2vxp_A            3 TVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI   82 (132)
T ss_dssp             CHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC
T ss_pred             cHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc
Confidence            3456666544 33333333332211122 357999999999999987531       1   2 79999999999888887


Q ss_pred             chhhccCCccccccCceEEEEEccCCcceeeeeeeEeecCCCC-CccceEEeeehhhcc
Q 019462           95 KTLAFGSRLPTLLSNHSLIVTVSDFNNAHLSINGVLIQESPMF-DQEELVVYGIDEFFN  152 (340)
Q Consensus        95 ~~l~~g~~l~Tl~~g~~l~vt~~~~~~~~v~vn~a~I~~~di~-~ng~~vVH~Id~VL~  152 (340)
                      ..   +..++|+ .|..++|+..+   +.+++|+++|+.+|+. .||  +||+||+||.
T Consensus        83 ~~---~~~~~tl-~G~~l~v~~~~---~~v~vn~a~v~~~di~a~NG--vIHvID~VLl  132 (132)
T 2vxp_A           83 GA---LVRLKSL-QGDKLEVSLKN---NVVSVNKEPVAEPDIMATNG--VVHVITNVLQ  132 (132)
T ss_dssp             SS---CEEEEBT-TSSEEEEEEET---TEEEESSCBEEEEEEEETTE--EEEEESSCC-
T ss_pred             cC---CceEecC-CCCEEEEEEeC---CEEEEeccEEEEcceecCCE--EEEEECcEeC
Confidence            53   4557776 78899998764   6799999999999985 777  9999999984

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	340
d1nyoa_	163	b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobact	2e-06
d1o70a1	140	b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Dros	0.001
d1o70a2	157	b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Dros	0.002

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 163

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 218 LTIFAPVDAAMEPYVKNITDCVSIFKQHVVLRLLRWQDLIRLDGGTTLPTSS--EGFKIT 275
            T+FAP +AA      +  D +      +   L       +      + T    +G  +T
Sbjct: 66  YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVGTRQTLQGASVT 125

Query: 276 VAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLL 310
           V   G+ + +    VV   + ++N   V+ +DS+L
Sbjct: 126 VTGQGNSLKVGNADVVCGGVSTANA-TVYMIDSVL 159

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 140

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.7 bits (84), Expect = 0.001
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 16/130 (12%)

Query: 198 YTLMATFLDMQLARFTNQTRLTIFAPVDAAM-----EPYVKNITDCVSIFKQHVVLRLLR 252
           Y ++       L    + T +TI AP + A         +++      I   H++   L 
Sbjct: 10  YEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLN 69

Query: 253 WQDLIRLD--GGTTLPTSSEGFKITVAYSGDVILL--------NGVPVVFPDMYSSNWLV 302
              + + +      +PT +    +     G+                V+  D+  +N   
Sbjct: 70  VDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTN-GY 128

Query: 303 VHGLDSLLAV 312
           VH +D +L V
Sbjct: 129 VHIIDHVLGV 138

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 157

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 25/140 (17%)

Query: 193 LNSRGYTLMATFLDMQLARFTNQTRLTIFAPVDAAMEPYVKNITDCV------------- 239
           ++        +  + QL     Q R T F P D   +    +                  
Sbjct: 13  MSDTYKMGKFSHFNDQLN--NTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSK 70

Query: 240 SIFKQHVVLRLLRWQDLI-----RLDGGTTLPTSSEGFKITVAYSGDVILL----NGVPV 290
           SI ++H+ +    +         +  G   LPT  +   I V       ++      + V
Sbjct: 71  SILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKINV 130

Query: 291 VFPDMYSSNWLVVHGLDSLL 310
             PD+  +N  ++H +D  L
Sbjct: 131 YRPDVECTNG-IIHVIDYPL 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	340
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.86
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.72
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.7
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.68
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.45
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.3

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.86  E-value=4e-23  Score=177.59  Aligned_cols=120  Identities=24%  Similarity=0.256  Sum_probs=95.5

Q ss_pred             cchhcccc-cCchhhhHHHhh------HhhhhccceeEEEeeecccccccccc--------cchhHHHHhhhhhHhhhhc
Q 019462          188 EASDLLNS-RGYTLMATFLDM------QLARFTNQTRLTIFAPVDAAMEPYVK--------NITDCVSIFKQHVVLRLLR  252 (340)
Q Consensus       188 ~~~~~L~~-~g~~~~~~~L~~------~l~~l~~~~~~TvFAPtD~Af~~~~~--------~~~~l~~iL~yHvVp~~~~  252 (340)
                      .+.+.+.+ ..|++|..++.+      .|.+..+.++||||||+|+||++++.        +.+.++++|+|||+++++.
T Consensus        29 ~v~~~a~~~p~lstl~~Al~a~~~~~a~L~~~L~~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~  108 (163)
T d1nyoa_          29 PVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTS  108 (163)
T ss_dssp             CHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCC
T ss_pred             hHHHHHhcCCchHHHHHHHhhccccccchhHhhcCCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhh
Confidence            34444553 459999988864      23332234789999999999999753        2355889999999999998


Q ss_pred             ccceeeccCCccccCCCCCeEEEEEEeccEEEECCceeecccccccceEEeeecccccccCCC
Q 019462          253 WQDLIRLDGGTTLPTSSEGFKITVAYSGDVILLNGVPVVFPDMYSSNWLVVHGLDSLLAVSPL  315 (340)
Q Consensus       253 ~~dL~~~~~g~~l~Tl~~g~~L~v~~~~~~i~vn~a~V~~~di~~~~~gvIH~Id~VL~~p~~  315 (340)
                      .+++..     .++|+ .|..+.|+..++.++||+++|+.+||.+ +|||||+||+|| +||.
T Consensus       109 ~~~l~~-----~~~Tl-~G~~l~v~~~~~~i~v~~a~Vv~~di~a-~NGvIHvID~VL-lPPa  163 (163)
T d1nyoa_         109 PANVVG-----TRQTL-QGASVTVTGQGNSLKVGNADVVCGGVST-ANATVYMIDSVL-MPPA  163 (163)
T ss_dssp             TTTSCE-----EEECT-TSSEEEEEECSSCEEETTEECSSBCCCC-SSEEEBCBSSCC-CCCC
T ss_pred             hhhhhh-----hhhhc-cCcceeEEecCCEEEEeceEEEECCeec-CCcEEEEECccc-cCCC
Confidence            888753     36777 5889999999999999999999999875 679999999999 9973

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.72  E-value=9.8e-19  Score=145.02  Aligned_cols=116  Identities=19%  Similarity=0.225  Sum_probs=81.5

Q ss_pred             CchhhhHHHhhH----hhhhccceeEEEeeecccccccccc-----cchhHHHHhhhhhHhhhhcccceeeccC--Cccc
Q 019462          197 GYTLMATFLDMQ----LARFTNQTRLTIFAPVDAAMEPYVK-----NITDCVSIFKQHVVLRLLRWQDLIRLDG--GTTL  265 (340)
Q Consensus       197 g~~~~~~~L~~~----l~~l~~~~~~TvFAPtD~Af~~~~~-----~~~~l~~iL~yHvVp~~~~~~dL~~~~~--g~~l  265 (340)
                      +|+.|..+++..    ...+.+.+++|+|||+|+||+++..     +.+.++.+|+|||+|+++..+++.....  ...+
T Consensus         5 ~~~~f~~~i~~~g~~~~~~l~~~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~   84 (140)
T d1o70a1           5 ALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQV   84 (140)
T ss_dssp             HHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCE
T ss_pred             cHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEe
Confidence            456666666432    2345556789999999999988653     3456889999999999998888864322  2346


Q ss_pred             cCCCCCeEEEEEEec----cEEEEC----CceeecccccccceEEeeecccccccCC
Q 019462          266 PTSSEGFKITVAYSG----DVILLN----GVPVVFPDMYSSNWLVVHGLDSLLAVSP  314 (340)
Q Consensus       266 ~Tl~~g~~L~v~~~~----~~i~vn----~a~V~~~di~~~~~gvIH~Id~VL~~p~  314 (340)
                      +|+.++....+...+    ..+.++    .++|+.+|+.+ .|||||+||+|| .||
T Consensus        85 ~t~~g~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~~-~NGvIH~ID~VL-~~P  139 (140)
T d1o70a1          85 PTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVL-GVP  139 (140)
T ss_dssp             EBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCT-TSC
T ss_pred             eecCCCceEEEEEeccceeEEEEecCCcceEEEEeCCEec-CCeEEEEECCcc-CCc
Confidence            777654444444332    145543    37899999875 678999999999 776

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.70  E-value=1.6e-18  Score=146.66  Aligned_cols=126  Identities=20%  Similarity=0.234  Sum_probs=82.5

Q ss_pred             chhcccc-cCchhhhHHHhh-Hhhh-hcc-ceeEEEeeeccccccccccc-------------chhHHHHhhhhhHhhhh
Q 019462          189 ASDLLNS-RGYTLMATFLDM-QLAR-FTN-QTRLTIFAPVDAAMEPYVKN-------------ITDCVSIFKQHVVLRLL  251 (340)
Q Consensus       189 ~~~~L~~-~g~~~~~~~L~~-~l~~-l~~-~~~~TvFAPtD~Af~~~~~~-------------~~~l~~iL~yHvVp~~~  251 (340)
                      +.+.+++ ..|+.|.++++. .+.+ +.. .+++|+|||+|+||+++...             .+.++.+|+|||+|+..
T Consensus         3 i~~~l~~~p~ls~~~~~~~~s~l~~~L~~~~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~   82 (157)
T d1o70a2           3 VLGKLESDPMMSDTYKMGKFSHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDK   82 (157)
T ss_dssp             HHHHHHHCGGGHHHHHHTTTTTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESS
T ss_pred             HHHHHHhCccHHHHHHHHHhCCHHHHHhCCCCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccc
Confidence            4455554 458888877753 3433 433 46899999999999997421             24478899999999865


Q ss_pred             ccccee--e---ccCCccccCCCCCeEEEEEEeccEEEE----CCceeecccccccceEEeeecccccccCCCc
Q 019462          252 RWQDLI--R---LDGGTTLPTSSEGFKITVAYSGDVILL----NGVPVVFPDMYSSNWLVVHGLDSLLAVSPLD  316 (340)
Q Consensus       252 ~~~dL~--~---~~~g~~l~Tl~~g~~L~v~~~~~~i~v----n~a~V~~~di~~~~~gvIH~Id~VL~~p~~~  316 (340)
                      .+.+..  .   .......+|+.+...+.+...++.+.+    |+++|+.+|+.+ .|||||+||+|| +|+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~V~~~Di~a-~NGviHvID~VL-lp~~d  154 (157)
T d1o70a2          83 EYTMKDLVKFSQESGSVILPTFRDSLSIRVEEEAGRYVIIWNYKKINVYRPDVEC-TNGIIHVIDYPL-LEEKD  154 (157)
T ss_dssp             CCCHHHHHHHHHHSSSEEEECSSSEEEEEEEEETTEEEEEETTEEEEEEEEEEEE-TTEEEEEESSCS-CCTTT
T ss_pred             cchhhhhhhhhccCCceeEEecCCcEEEEEEcCCcEEEEecCCccceEEECCEec-CCeEEEEECcee-cCCCC
Confidence            433221  1   111233455533344555666665544    458999999875 668999999999 88543

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.68  E-value=2.2e-18  Score=147.68  Aligned_cols=90  Identities=27%  Similarity=0.338  Sum_probs=75.2

Q ss_pred             ccceeEEeecCCCccccccccc---------c-c-cceeeecCCCccCccccchhhccCCccccccCceEEEEEccCCcc
Q 019462           54 LESKTLTIFSPSDFSFSQSGQL---------S-L-SQLQYHISPSRLSQDSLKTLAFGSRLPTLLSNHSLIVTVSDFNNA  122 (340)
Q Consensus        54 l~~~~~TVFAPtd~AF~~~~~~---------~-l-~lL~yHvvp~~~~~~~L~~l~~g~~l~Tl~~g~~l~vt~~~~~~~  122 (340)
                      +..|+||||||+|+||.+++..         . + ++|+||++++++..+++..     .++|+ .|..++|+..+   +
T Consensus        61 L~~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~~~~l~~-----~~~Tl-~G~~l~v~~~~---~  131 (163)
T d1nyoa_          61 LNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVG-----TRQTL-QGASVTVTGQG---N  131 (163)
T ss_dssp             HTSSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSCE-----EEECT-TSSEEEEEECS---S
T ss_pred             hcCCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhhhhhhhh-----hhhhc-cCcceeEEecC---C
Confidence            3457999999999999987521         1 2 8999999999999998853     24565 79999999864   6


Q ss_pred             eeeeeeeEeecCCCC-CccceEEeeehhhcccc
Q 019462          123 HLSINGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus       123 ~v~vn~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      .+++|+++|+.+|+. .||  +||+||+||.||
T Consensus       132 ~i~v~~a~Vv~~di~a~NG--vIHvID~VLlPP  162 (163)
T d1nyoa_         132 SLKVGNADVVCGGVSTANA--TVYMIDSVLMPP  162 (163)
T ss_dssp             CEEETTEECSSBCCCCSSE--EEBCBSSCCCCC
T ss_pred             EEEEeceEEEECCeecCCc--EEEEECccccCC
Confidence            899999999999996 677  999999999998

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.45  E-value=8.4e-15  Score=120.84  Aligned_cols=97  Identities=20%  Similarity=0.282  Sum_probs=67.5

Q ss_pred             ceeEEeecCCCcccccccccc-------c-cceeeecCCCccCccccchhhcc--CCccccccCceEEEEEcc-CCccee
Q 019462           56 SKTLTIFSPSDFSFSQSGQLS-------L-SQLQYHISPSRLSQDSLKTLAFG--SRLPTLLSNHSLIVTVSD-FNNAHL  124 (340)
Q Consensus        56 ~~~~TVFAPtd~AF~~~~~~~-------l-~lL~yHvvp~~~~~~~L~~l~~g--~~l~Tl~~g~~l~vt~~~-~~~~~v  124 (340)
                      .+++|||||+|+||.+.....       + .+|+||++++++..+++......  ..++|+..+....+.... .....+
T Consensus        27 ~~~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~~  106 (140)
T d1o70a1          27 LTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVI  106 (140)
T ss_dssp             CSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEE
T ss_pred             CCCEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEeeecCCCceEEEEEeccceeEEE
Confidence            358999999999998865321       2 79999999999999998754221  235666444444444332 011223


Q ss_pred             ee----eeeEeecCCCC-CccceEEeeehhhcccc
Q 019462          125 SI----NGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus       125 ~v----n~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      .+    +.++|+.+|+. .||  +||+||+||.||
T Consensus       107 ~~~~~~~~a~V~~~Di~~~NG--vIH~ID~VL~~P  139 (140)
T d1o70a1         107 TVEGGGVNATVIQADVAQTNG--YVHIIDHVLGVP  139 (140)
T ss_dssp             EEEETTEEEEEEEEEEECSSE--EEEEESSCTTSC
T ss_pred             EecCCcceEEEEeCCEecCCe--EEEEECCccCCc
Confidence            33    34889999985 677  999999999998

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.30  E-value=1.3e-13  Score=115.97  Aligned_cols=94  Identities=19%  Similarity=0.193  Sum_probs=60.4

Q ss_pred             ceeEEeecCCCccccccccc---------------cc-cceeeecCCCccCccccch--h--hccCC-ccccccCceEEE
Q 019462           56 SKTLTIFSPSDFSFSQSGQL---------------SL-SQLQYHISPSRLSQDSLKT--L--AFGSR-LPTLLSNHSLIV  114 (340)
Q Consensus        56 ~~~~TVFAPtd~AF~~~~~~---------------~l-~lL~yHvvp~~~~~~~L~~--l--~~g~~-l~Tl~~g~~l~v  114 (340)
                      .+++|||||+|+||.++...               .+ .+|+||++++.....+...  .  ..+.. .+|+.....+.+
T Consensus        33 ~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (157)
T d1o70a2          33 QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRV  112 (157)
T ss_dssp             SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSSSEEEEEE
T ss_pred             CCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccccchhhhhhhhhccCCceeEEecCCcEEEEE
Confidence            36899999999999986310               01 6899999998765444321  1  11111 233321223333


Q ss_pred             EEccCCcceeee----eeeEeecCCCC-CccceEEeeehhhcccc
Q 019462          115 TVSDFNNAHLSI----NGVLIQESPMF-DQEELVVYGIDEFFNSS  154 (340)
Q Consensus       115 t~~~~~~~~v~v----n~a~I~~~di~-~ng~~vVH~Id~VL~P~  154 (340)
                      ...+   +.+.+    ++++|+.+|+. .||  +||+||+||.|+
T Consensus       113 ~~~~---~~~~~~~~~~~a~V~~~Di~a~NG--viHvID~VLlp~  152 (157)
T d1o70a2         113 EEEA---GRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLEE  152 (157)
T ss_dssp             EEET---TEEEEEETTEEEEEEEEEEEETTE--EEEEESSCSCCT
T ss_pred             EcCC---cEEEEecCCccceEEECCEecCCe--EEEEECceecCC
Confidence            4332   33333    57999999996 777  999999999997